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Developing monitoring system for paper industrial wastewater treatment system is an important route for wastewater reuse and recycling from wastewater, which are regarded as effective way for cleaner production. A novel hybrid deep leaning CLSTMA model, which based on sequential fusion convolutional neural network (CNN), long short term memory (LSTM) and attention mechanism (AM), was developed to monitor the water quality in a full-scale paper industrial wastewater treatment system for energy conservation and emissions reduction. The hybrid CLSTMA model for predicting water quality of paper industrial wastewater treatment system was divided into three steps: spatial information fusion by using CNN module, temporal information fusion by using LSTM module and variable weighted calculation by using AM module. Compare with other models (CNN, LSTM and CLSTM models), RMSE of CLSTMA model for the effluent chemical oxygen demand (COD eff) reduced by 23.3–31.55%, MAE of CLSTMA model reduced by 38.89–74.50%, R of CLSTMA model increased by 8.29–11.86%. For the effluent suspended solids (SS eff), compared with CNN and LSTM models, RMSE of CLSTMA model reduced by 10.26% and 9.92%, MAE of CLSTMA model reduced by 5.37% and 3.44%, R of CLSTMA model increased by 15.13% and 37.21%, respectively. While, R of CLSTMA was consistent with CLSTM model, but RMSE and MAE of CLSTMA model reduced by 16.07% and 7.49% than the CLSTM model. Simulation results demonstrate that the proposed CLSTMA model has a great potential in monitoring paper industrial wastewater treatment system for cleaner production. [Display omitted] • A new deep learning model was proposed for real-time estimation of water quality. • The new model was based on convolutional neural network, long-term short-term memory and attention mechanism. • The new model can guarantee wastewater reuse and reduce the wastewater treatment cost. [ABSTRACT FROM AUTHOR]