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The theoretical and practical research of industrial integration provides new directions for the development of many industries and new ideas for the reform of many technologies. In particular, it provides new impetus for the development of agricultural modernisation. This paper takes the rural development of Inner Mongolia as the research object, discusses the integration of the primary, secondary and tertiary industries in agriculture, and then provides guidance for the further development of agriculture. Moreover, this paper combines big data technology to construct an input–output analysis model for the integration of primary, secondary and tertiary industries in rural areas of Inner Mongolia, and on this basis, conducts research and analysis on the model. In addition, this paper uses a simulation model to analyse the industrial integration and uses the statistical yearbook data of Inner Mongolia as the input to calculate the data mining effect and data analysis effect of this model. Through experimental research and analysis, it can be seen that the model constructed in this paper can play a certain effect in the analysis of the integration of primary, secondary and tertiary industries in the rural areas of Inner Mongolia. [ABSTRACT FROM AUTHOR]