An important event in the pathogenesis of Alzheimer's disease (AD) is the deposition of the amyloid \beta (A\beta)1--40 and 1--42 peptides in a fibrillar form, with A\beta42 typically having a greater propensity to undergo this conformational change. A major risk factor for late-onset AD is the inheritance of the apolipoprotein E (apoE) 4 allele [3,14,31]. We previously proposed that apoE may function as a ``pathological chaperone'' in the pathogenesis of AD (i.e. modulate the structure of A\beta, promoting or stabilizing a \beta-sheet conformation), prior to the discovery of this linkage [7,40,41,42]. Data from apoE knockout / A\betaPP...{\rm V717F}mice, has shown that the presence of apoE is necessary for cerebral amyloid formation [1,2], consistent with our hypothesis. However, in\betaPP...{\rm V717F} mice expressing human apoE3 or E4 early A\beta deposition at 9 months is suppressed, but by 15 months both human apoE expressing mice had significant fibrillar A\beta deposits with the apoE4 expressing mice having a 10 fold greater amyloid burden [8,9]. This and other data has suggested that apoE, in addition to having a facilitating role in fibril formation, may also influence clearance of A\beta peptides. In order to address if apoE affects the clearance of A\beta peptides across the blood-brain barrier (BBB) and whether there are differences in the clearance of A\beta40 versus A\beta42, we performed stereotactic, intra-ventricular micro-injections of A\beta40, A\beta42 or control peptides in wild-type, apoE knock-out (KO) or human apoE3 or apoE4 expressing transgenic mice... [ABSTRACT FROM AUTHOR]