1. MOCAT2: a metagenomic assembly, annotation and profiling framework.
- Author
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Kultima, Jens Roat, Coelho, Luis Pedro, Forslund, Kristoffer, Huerta-Cepas, Jaime, Li, Simone S., Driessen, Marja, Voigt, Anita Yvonne, Zeller, Georg, Sunagawa, Shinichi, and Bork, Peer
- Subjects
- *
METAGENOMICS , *GENES , *GENOMES , *PROTEIN domains , *MICROBIAL virulence , *CARBOHYDRATE metabolism - Abstract
Summary: MOCAT2 is a software pipeline for metagenomic sequence assembly and gene prediction with novel features for taxonomic and functional abundance profiling. The automated generation and efficient annotation of non-redundant reference catalogs by propagating pre-computed assignments from 18 databases covering various functional categories allows for fast and comprehensive functional characterization of metagenomes. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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