1. A novel N4,N4-dimethylcytidine in the archaeal ribosome enhances hyperthermophily.
- Author
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Fluke, Kristin A., Nan Dai, Wolf, Eric J., Fuchs, Ryan T., Shing Ho, P., Talbott, Victoria, Elkins, Liam, Yueh-Lin Tsai, Schiltz, Jackson, Febvre, Hallie P., Czarny, Ryan, Robb, G. Brett, Corrêa Jr., Ivan R., and Santangelo, Thomas J.
- Subjects
RNA modification & restriction ,RIBOSOMAL RNA ,GENETIC translation ,METHYLTRANSFERASES ,RNA - Abstract
Ribosome structure and activity are challenged at high temperatures, often demanding modifications to ribosomal RNAs (rRNAs) to retain translation fidelity. LC-MS/MS, bisulfite-sequencing, and high-resolution cryo-EM structures of the archaeal ribosome identified an RNA modification, N4,N4-dimethylcytidine (m
4 2 C), at the universally conserved C918 in the 16S rRNA helix 31 loop. Here, we characterize and structurally resolve a class of RNA methyltransferase that generates m4 2C whose function is critical for hyperthermophilic growth. m4 2 C is synthesized by the activity of a unique family of RNA methyltransferase containing a Rossman-fold that targets only intact ribosomes. The phylogenetic distribution of the newly identified m4 2 C synthase family implies that m4 2 C is biologically relevant in each domain. Resistance of m4 2 C to bisulfite-driven deamination suggests that efforts to capture m5C profiles via bisulfite sequencing are also capturing m4 2 C. [ABSTRACT FROM AUTHOR]- Published
- 2024
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