29 results on '"Jones, Keaton"'
Search Results
2. Using Spectral Flow Cytometry to Characterize Anti‐Tumor Immunity in Orthotopic and Subcutaneous Mouse Models of Cancer.
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Valenzano, Giampiero, Russell, Shannon N., Go, Simei, O'Neill, Eric, and Jones, Keaton I.
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- 2024
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3. Targeting PI3K-gamma in myeloid driven tumour immune suppression: a systematic review and meta-analysis of the preclinical literature.
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Xu, Haonan, Russell, Shannon Nicole, Steiner, Katherine, O’Neill, Eric, and Jones, Keaton Ian
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The intricate interplay between immune and stromal cells within the tumour microenvironment (TME) significantly influences tumour progression. Myeloid cells, including tumour-associated macrophages (TAMs), neutrophils (TANs), and myeloid-derived suppressor cells (MDSCs), contribute to immune suppression in the TME (Nakamura and Smyth in Cell Mol Immunol 17(1):1–12 (2020). ; DeNardo and Ruffell in Nat Rev Immunol 19(6):369–382 (2019). ). This poses a significant challenge for novel immunotherapeutics that rely on host immunity to exert their effect. This systematic review explores the preclinical evidence surrounding the inhibition of phosphoinositide 3-kinase gamma (PI3Kγ) as a strategy to reverse myeloid-driven immune suppression in solid tumours. EMBASE, MEDLINE, and PubMed databases were searched on 6 October 2022 using keyword and subject heading terms to capture relevant studies. The studies, focusing on PI3Kγ inhibition in animal models, were subjected to predefined inclusion and exclusion criteria. Extracted data included tumour growth kinetics, survival endpoints, and immunological responses which were meta-analysed. PRISMA and MOOSE guidelines were followed. A total of 36 studies covering 73 animal models were included in the review and meta-analysis. Tumour models covered breast, colorectal, lung, skin, pancreas, brain, liver, prostate, head and neck, soft tissue, gastric, and oral cancer. The predominant PI3Kγ inhibitors were IPI-549 and TG100-115, demonstrating favourable specificity for the gamma isoform. Combination therapies, often involving chemotherapy, radiotherapy, immune checkpoint inhibitors, biological agents, or vaccines, were explored in 81% of studies. Analysis of tumour growth kinetics revealed a statistically significant though heterogeneous response to PI3Kγ monotherapy, whereas the tumour growth in combination treated groups were more consistently reduced. Survival analysis showed a pronounced increase in median overall survival with combination therapy. This systematic review provides a comprehensive analysis of preclinical studies investigating PI3Kγ inhibition in myeloid-driven tumour immune suppression. The identified studies underscore the potential of PI3Kγ inhibition in reshaping the TME by modulating myeloid cell functions. The combination of PI3Kγ inhibition with other therapeutic modalities demonstrated enhanced antitumour effects, suggesting a synergistic approach to overcome immune suppression. These findings support the potential of PI3Kγ-targeted therapies, particularly in combination regimens, as a promising avenue for future clinical exploration in diverse solid tumour types. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Geomorphic Evolution of a Levee Setback in a Gravel–Sand Channel in Washington State.
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Curran, Joanna Crowe, Dahl, Travis A., Corum, Zachary P., and Jones, Keaton E.
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RIVER channels ,SEDIMENTATION & deposition ,SEDIMENT transport ,LEVEES ,ANGLES ,FORCED migration - Abstract
Levee setbacks can create space for side channels, reduce flood impacts, and provide environmental benefits. Guidance is needed on how side channel design affects geomorphic changes over time. This paper explores application of existing research on natural and forced side channels to a levee setback with side channel on the White River (Washington). The side channel maintained a high bifurcation angle into the setback for 2 years. High flows then reset the bifurcation to a lower angle. Flow and sediment volumes and deposition patterns from each 2-year period matched results from existing studies for either a high or low angle. Application of existing research insight into expected flows and sediment patterns was dependent on a static bifurcation angle. In this case study, because the entrance area did not restrict the bifurcation angle and the flow regime included high flows, the bifurcation angle could adjust to maintain the side channel. Designing a large setback entrance enabled the channel to self-adjust to maintain flow and sediment transport into the side channel without the need for engineering intervention. [ABSTRACT FROM AUTHOR]
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- 2025
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5. Uncertainty for the ISSDOTv2 Bedload Measurement Method.
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McAlpin, Tate O., Wren, Daniel G., Jones, Keaton E., Abraham, David D., Kuhnle, Roger A., and Willson, Clinton S.
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BED load ,SAND waves ,REGRESSION analysis ,GEOMETRIC analysis ,TIME measurements ,SEDIMENT transport - Abstract
The Integrated, Section Surface Difference Over Time, version 2 (ISSDOTv2) method provides a means of quantifying bedload in large sandbed rivers. Like all measurements, it is important to understand the uncertainty associated with the method before making management decisions based on its results. A methodology is presented for quantifying and combining the uncertainty for each component of the ISSDOTv2 method including particle density, bed porosity, acoustically measured bed topography, the timing of measurements, sand wave identification, and regression analysis used for geometric correction of bedload measurements. The approach provides an indication of the relative magnitude of each source of uncertainty in addition to the uncertainty in the final resultant transport rate. Laboratory flume measurements were used to evaluate the uncertainty limits and verify the approach. The greatest contributor to uncertainty was found to be the bathymetric uncertainty, and, at the highest transport rates, cumulative relative uncertainty was found to be approximately 10%. Cumulative relative uncertainties grew rapidly with decreasing flow rates, driven primarily by the higher relative contribution of the effect of bathymetric uncertainty on the smaller bedforms that are typically present at lower transport rates. The approach documented here will be transferrable to real-world systems to determine the uncertainty in measured bedload sediment transport rates using the ISSDOTv2 method. [ABSTRACT FROM AUTHOR]
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- 2023
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6. Analysis of Bedforms in the Mississippi River at Vicksburg, Mississippi, for Select Flows 2011–2016.
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Wren, Daniel G., McAlpin, Tate O., Smith, James E., Jones, Keaton E., Kuhnle, Roger A., and Abraham, David D.
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BED load ,LABOR costs ,TOPOGRAPHY ,RESEARCH & development ,RESEARCH institutes ,RIVER sediments - Abstract
Quantification of sediment transport rates is necessary for river management but remains difficult due to large volumes of sediment in motion, spatiotemporal heterogeneity in discharge, depth, and morphology, the need for expensive equipment, and personnel costs. During efforts to quantify sediment bed load in the Mississippi (MS) River near Vicksburg, MS, US, the US Army Corps of Engineers-Engineer Research and Development Center (USACE-ERDC) collected acoustic multibeam topographic data during the 2011 MS River flood. Bed topography data were analyzed to quantify the effect of changing flow rates on bed topography. Bedforms were much higher and longer in the center section than near either bank, and superimposed bedforms were found during the falling limb of the 2011 flood hydrograph. Bedform amplitudes and lengths were positively correlated with flow depths, but amplitudes were typically higher and lengths shorter than predicted in previous research. Topography data from three lower flows are included to illustrate the morphometric variation induced by a wide range of discharges. [ABSTRACT FROM AUTHOR]
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- 2023
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7. Bed-Load Validation for ISSDOTv2.
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McAlpin, Tate O., Wren, Daniel G., Jones, Keaton E., Abraham, David D., and Kuhnle, Roger A.
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BED load ,RIVER channels ,FLUMES - Abstract
Bed-load transport is an important process impacting riverine morphology, but until recently it has proven difficult to measure in large sand-bed rivers. Integrated Section, Surface Difference Over Time, version 2 (ISSDOTv2) method provides a means of quantifying the bed load in large sand-bed rivers. A series of flume experiments, which included frequent measurements of bed topography and an independent measurement of bed load across a range of flows, was used to provide validation for the ISSDOTv2 method. The mean difference between the ISSDOTv2 calculations and the estimated bed load was 5.6% (high flow), 12.9% (medium flow), and 56% (low flow), indicating improved accuracy for higher flow and transport conditions. It was also found that the ISSDOTv2 method responded appropriately to rapid step-downs in flow, as indicated by agreement between ISSDOTv2 load results and accompanying independent measurements of bed load. [ABSTRACT FROM AUTHOR]
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- 2022
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8. Effectiveness of building-level sewage surveillance during both community-spread and sporadic-infection phases of SARS-CoV-2 in a university campus population.
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Johnson, William, Reeves, Katelyn, Liebig, Jennifer, Feula, Antonio, Butler, Claire, Alkire, Michaela, Singh, Samiha, Litton, Shelby, O'Conor, Kerry, Jones, Keaton, Ortega, Nikolas, Shimek, Trace, Witteman, Julia, Bjorkman, Kristen K., and Mansfeldt, Cresten
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SARS-CoV-2 ,PUBLIC health ,MICROBIAL communities ,SEWAGE ,NOROVIRUSES - Abstract
Pathogen surveillance within wastewater rapidly progressed during the SARS-CoV-2 pandemic and informed public health management. In addition to the successful monitoring of entire sewer catchment basins at the treatment facility scale, subcatchment or building-levelmonitoring enabled targeted support of resource deployment. However, optimizing the temporal and spatial resolution of these monitoring programs remains complex due to population dynamics and within-sewer physical, chemical, and biological processes. To address these limitations, this study explores the advancement of the building-scale network that monitored the oncampus residential population at the University of Colorado Boulder between August 2020 and May 2021 through a daily SARS-CoV-2 surveillance campaign. During the study period, SARS-CoV-2 infection prevalence transitioned from robust community spread in Fall 2020 to sporadic infections in Spring 2021. Temporally, these distinct phases enabled investigating the effectiveness of resource commitment by exploring subsets of the original daily sampling data. Spatially, select sampling sites were installed along the flow path of the pipe network, enabling the exploration of the conservation of viral concentrations within the wastewater. Infection prevalence and resource commitment for informed action displayed an inverted relationship: higher temporal and spatial resolution surveillance is more imperative during sporadic infection phases than during high prevalence periods. This relationship was reinforced when norovirus (two minor clusters) and influenza (primarily absent) were additionally surveilled at a weekly frequency. Overall, resource commitment should scale to meet the objectives of the monitoring campaign--providing a general prevalence estimate requires fewer resources than an early-warning and targeted-action monitoring framework. [ABSTRACT FROM AUTHOR]
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- 2022
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9. Impacts of combining anti-PD-L1 immunotherapy and radiotherapy on the tumour immune microenvironment in a murine prostate cancer model.
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Philippou, Yiannis, Sjoberg, Hanna T., Murphy, Emma, Alyacoubi, Said, Jones, Keaton I., Gordon-Weeks, Alex N., Phyu, Su, Parkes, Eileen E., Gillies McKenna, W., Lamb, Alastair D., Gileadi, Uzi, Cerundolo, Vincenzo, Scheiblin, David A., Lockett, Stephen J., Wink, David A., Mills, Ian G., Hamdy, Freddie C., Muschel, Ruth J., and Bryant, Richard J.
- Abstract
Background: Radiotherapy enhances innate and adaptive anti-tumour immunity. It is unclear whether this effect may be harnessed by combining immunotherapy with radiotherapy fractions used to treat prostate cancer. We investigated tumour immune microenvironment responses of pre-clinical prostate cancer models to radiotherapy. Having defined this landscape, we tested whether radiotherapy-induced tumour growth delay could be enhanced with anti-PD-L1.Methods: Hypofractionated radiotherapy was delivered to TRAMP-C1 and MyC-CaP flank allografts. Tumour growth delay, tumour immune microenvironment flow-cytometry, and immune gene expression were analysed. TRAMP-C1 allografts were then treated with 3 × 5 Gy ± anti-PD-L1.Results: 3 × 5 Gy caused tumour growth delay in TRAMP-C1 and MyC-CaP. Tumour immune microenvironment changes in TRAMP-C1 at 7 days post-radiotherapy included increased tumour-associated macrophages and dendritic cells and upregulation of PD-1/PD-L1, CD8+ T-cell, dendritic cell, and regulatory T-cell genes. At tumour regrowth post-3 × 5 Gy the tumour immune microenvironment flow-cytometry was similar to control tumours, however CD8+, natural killer and dendritic cell gene transcripts were reduced. PD-L1 inhibition plus 3 × 5 Gy in TRAMP-C1 did not enhance tumour growth delay versus monotherapy.Conclusion: 3 × 5 Gy hypofractionated radiotherapy can result in tumour growth delay and immune cell changes in allograft prostate cancer models. Adjuncts beyond immunomodulation may be necessary to improve the radiotherapy-induced anti-tumour response. [ABSTRACT FROM AUTHOR]- Published
- 2020
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10. FGF2 alters macrophage polarization, tumour immunity and growth and can be targeted during radiotherapy.
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Im, Jae Hong, Buzzelli, Jon N., Jones, Keaton, Franchini, Fanny, Gordon-Weeks, Alex, Markelc, Bostjan, Chen, Jianzhou, Kim, Jin, Cao, Yunhong, and Muschel, Ruth J.
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TUMORS ,BONE marrow ,IMMUNITY ,T cells ,CANCER cells - Abstract
Regulation of the programming of tumour-associated macrophages (TAMs) controls tumour growth and anti-tumour immunity. We examined the role of FGF2 in that regulation. Tumours in mice genetically deficient in low-molecular weight FGF2 (FGF2
LMW ) regress dependent on T cells. Yet, TAMS not T cells express FGF receptors. Bone marrow derived-macrophages from Fgf2LMW−/− mice co-injected with cancer cells reduce tumour growth and express more inflammatory cytokines. FGF2 is induced in the tumour microenvironment following fractionated radiation in murine tumours consistent with clinical reports. Combination treatment of in vivo tumours with fractionated radiation and a blocking antibody to FGF2 prolongs tumour growth delay, increases long-term survival and leads to a higher iNOS+ /CD206+ TAM ratio compared to irradiation alone. These studies show for the first time that FGF2 affects macrophage programming and is a critical regulator of immunity in the tumour microenvironment. Macrophages contribute to tumour progression and response to therapy. Here, the authors show that absence of FGF2 in the tumour microenvironment reduces tumour growth and enhances the anti-tumour immune response by altering macrophage polarization. As a result, disruption of this macrophage programming by anti-FGF2 blocking antibodies enhances the outcome from radiotherapy. [ABSTRACT FROM AUTHOR]- Published
- 2020
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11. Bed-load measurements on large, sand-bed rivers in the United States.
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Paquier, A., Rivière, N., Abraham, David, McAlpin, Tate, and Jones, Keaton
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- 2018
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12. Improving Colorectal Cancer Screening Rates in Patients Referred to a Gastroenterology Clinic.
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Bick, Benjamin L., El-Halabi, Mustapha, Jones, Keaton R., Kahi, Charles J., and Fayad, Nabil F.
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Supplemental Digital Content is Available in the Text. Colorectal cancer (CRC) is the third most common cancer and the second leading cause of cancer-related death in the United States. Colonoscopy and fecal immunochemistry testing (FIT) are the primary recommended CRC screening modalities. The purpose of this study is to improve rates of CRC screening in Veterans and County hospital patients referred to gastroenterology fellow's clinics. A total of 717 patients between ages of 49 and 75 years were seen. Previous CRC screening was not performed in 109 patients (15.2%) because of not being offered (73.4%) or declining (26.6%) screening. Patients who received previous CRC screening compared with no previous screening were older (mean age 62.3 years vs. 60.3 years, p <.003), white (88.6% vs. 78.3%, p <.027), and more likely to be Veterans patients (90.8% vs. 77.5%, p <.001). After systematically discussing options for screening with 78 of the 109 unscreened patients, 56 of them (71.8%) underwent screening with either colonoscopy (32) or FIT (24). Patients seen by fellows in their last year of training agreed to undergo screening more often than those seen by other fellows (100% vs. 66.2%, p <.033). Systematic discussions about both colonoscopy and FIT can improve the overall rates of CRC screening. [ABSTRACT FROM AUTHOR]
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- 2019
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13. Inter-operator variability in pPOSSUM scores: a note of caution.
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van Boxel, Gijsbert I, McLure, Stewart, Jones, Keaton, and Jones, Gregory
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Purpose: Predicting perioperative morbidity and mortality can be achieved by several risk predicting algorithms. In the UK, the National Emergency Laparotomy Audit, mandated for all patients undergoing emergency laparotomy, uses pPOSSUM as its risk prediction tool. However, there is no literature reporting the inter-operator variability in calculating the score. Inter-rater variability was assessed based on 10 real general surgical cases that went on to have an emergency laparotomy. Methods: Forty clinicians, 10 each of registrars and consultants in anaesthetics and general surgery, were asked to calculate the pPOSSUM based on the clinical information typically available at the time of making the decision to proceed to emergency laparotomy for the same 10 National Emergency Laparotomy Audit cases. All participants were surveyed to assess their understanding and use of the pPOSSUM score. Results: More than 80% of respondents stated that they use pPOSSUM in daily clinical practice. There was variability in the calculated scores between the groups analysed. Two subgroups were evident: one in which the calculated mean pPOSSUM was similar between participants but did not reflect the true value, and the other which was accurate, but demonstrated high inter-rater variability. Conclusions: This is the first study to investigate inter-operator variability in pPOSSUM scores. Previous reports on the validity of the tool fail to account for subjective variation. At a time where pPOSSUM has become a routine part of clinical practice, this variability needs to be accounted for and taken into consideration in the decision-making process. [ABSTRACT FROM AUTHOR]
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- 2019
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14. Older Age and Disease Duration Are Highly Associated with Hepatocellular Carcinoma in Patients with Autoimmune Hepatitis.
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Dakhoul, Lara, Jones, Keaton R., Gawrieh, Samer, Ghabril, Marwan, McShane, Chelsey, Vuppalanchi, Raj, Vilar-Gomez, Eduardo, Nephew, Lauren, Chalasani, Naga, and Lammert, Craig
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CHRONIC active hepatitis ,DISEASES in older people ,DISEASE duration ,HEPATOCELLULAR carcinoma ,ACADEMIC medical centers ,COMORBIDITY ,LIVER diseases ,AGE distribution ,DATABASES ,LIVER tumors ,PROGNOSIS ,RESEARCH funding ,RISK assessment ,TIME ,CASE-control method ,ARTHRITIS Impact Measurement Scales - Abstract
Background: Hepatocellular carcinoma (HCC) is rare in patients with autoimmune hepatitis (AIH). However, the overall burden of AIH cirrhosis in causing HCC and patients' risk factors are not well understood.Aims: To characterize the proportion of HCC linked to AIH at a large academic health center, and to identify variables associated with HCC in patients with AIH in a case-control study design.Methods: Over a 14.5-year period, medical records of all patients with HCC were reviewed. Cases are AIH patients identified from the cohort, and controls are patients with AIH without HCC. Three controls were randomly chosen from the Genetic Repository of Autoimmune Liver Disease and Coexisting Exposures database for each eligible case.Results: Out of 1250 eligible patients, 20 were linked to AIH (1.6%). Their median age was 64 years, 40% men and 100% Caucasian. Ten percent of AIH patients did not have evidence of cirrhosis at HCC diagnosis. The proportion of HCCs due to AIH decreased during the time intervals of the study. Compared to controls, cases were more likely men (40.0% vs. 18%, p = 0.049), with longer AIH duration (median 16 years vs. 5 years, p = 0.004). Prolonged AIH duration (OR 1.68, p = 0.006) and older age (OR 1.15, p = 0.049) were risk factors for HCC.Conclusions: AIH is a rare cause (1.6%) for HCC in Midwestern USA with a decreasing trend over 14.5 years. Ten percent of AIH-HCC patients did not have cirrhosis at time of HCC diagnosis. Patients with prolonged duration of the disease and older age are at high risk to develop HCC. [ABSTRACT FROM AUTHOR]- Published
- 2019
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15. Racial Disparities in Liver Transplantation for Hepatocellular Carcinoma Are Not Explained by Differences in Comorbidities, Liver Disease Severity, or Tumor Burden.
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Dakhoul, Lara, Gawrieh, Samer, Jones, Keaton R., Ghabril, Marwan, McShane, Chelsey, Orman, Eric, Vilar‐Gomez, Eduardo, Chalasani, Naga, and Nephew, Lauren
- Abstract
Black patients have higher mortality and are less likely to receive liver transplantation for hepatocellular carcinoma (HCC) than white patients. Reasons for these disparities have not been fully elucidated. Comorbid disease, liver disease severity, cirrhosis etiologies, and tumor characteristics were compared between black and white patients with HCC seen at the Indiana University Academic Medical Center from January 2000 to June 2014. Logistic regression was used to investigate the primary outcome, which was liver transplantation. Log‐rank testing was used to compare survival between the two groups. Subgroup analysis explored reasons for failure to undergo liver transplantation in patients within Milan criteria. The cohort included 1,032 (86%) white and 164 (14%) black patients. Black and white patients had similar Model for End‐Stage Liver Disease (MELD) and Child‐Pugh scores (CPSs). There was a trend toward larger tumor size (5.3 cm versus 4.7 cm; P = 0.05) in black patients; however, Barcelona Clinic Liver Cancer (BCLC) staging and Milan criteria were similar. Black patients were less likely to undergo liver transplantation than white patients; this was a disparity that was not attenuated (odds ratio [OR], 0.43; 95% confidence interval [CI], 0.21‐0.90) on multivariable analysis. Substance abuse was more frequently cited as the reason black patients within Milan criteria failed to undergo transplantation compared to white patients. Survival was similar between the two groups. Conclusion: Racial differences in patient and tumor characteristics were small and did not explain the disparity in liver transplantation. Higher rates of substance abuse in black patients within Milan criteria who failed to undergo transplantation suggest social factors contribute to this disparity in this cohort. [ABSTRACT FROM AUTHOR]
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- 2019
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16. Lower expression of tumor microRNA‐26a is associated with higher recurrence in patients with hepatocellular carcinoma undergoing surgical treatment.
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Jones, Keaton R., Nabinger, Sarah C., Lee, Sangbin, Sahu, Smiti Snigdha, Althouse, Sandra, Saxena, Romil, Johnson, Mathew S., Chalasani, Naga, Gawrieh, Samer, and Kota, Janaiah
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- 2018
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17. Management of Autoimmune Hepatitis Patients Refractory to or Intolerant of Standard Therapies.
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Jones, Keaton R. and Lammert, Craig S.
- Abstract
Purpose of Review: Autoimmune hepatitis is a progressive T cell-dependent inflammatory process characterized by elevated autoantibodies, serum globulins, and interface hepatitis. Pharmacologic treatment focuses on achievement of complete biochemical remission. The goal of this paper is to describe the unique features that guide treatment in difficult-to-control cases of autoimmune hepatitis.Recent Findings: Recently published retrospective reviews have noted the efficacy of multiple second- and third-line agents in the treatment of autoimmune hepatitis. There has been no widely accepted approach regarding which agents to use in specific patient populations.Summary: This paper attempts to summarize recent evidence regarding treatment efficacy of second- and third-line therapies and addresses patient-specific considerations when deciding which therapies to choose. [ABSTRACT FROM AUTHOR]
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- 2018
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18. Radiologically Determined Sarcopenia Predicts Morbidity and Mortality Following Abdominal Surgery: A Systematic Review and Meta-Analysis.
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Jones, Keaton, Gordon-Weeks, Alex, Coleman, Claire, and Silva, Michael
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SARCOPENIA ,RADIOLOGY ,SYSTEMATIC reviews ,META-analysis ,MORTALITY ,POSTOPERATIVE care ,THERAPEUTICS - Abstract
Background: Individualised risk prediction is crucial if targeted pre-operative risk reduction strategies are to be deployed effectively. Radiologically determined sarcopenia has been shown to predict outcomes across a range of intra-abdominal pathologies. Access to pre-operative cross-sectional imaging has resulted in a number of studies investigating the predictive value of radiologically assessed sarcopenia over recent years. This systematic review and meta-analysis aimed to determine whether radiologically determined sarcopenia predicts post-operative morbidity and mortality following abdominal surgery. Method: CENTRAL, EMBASE and MEDLINE databases were searched using terms to capture the concept of radiologically assessed sarcopenia used to predict post-operative complications in abdominal surgery. Outcomes included 30 day post-operative morbidity and mortality, 1-, 3- and 5-year overall and disease-free survival and length of stay. Data were extracted and meta-analysed using either random or fixed effects model (Revman 5.3). Results: A total of 24 studies involving 5267 patients were included in the review. The presence of sarcopenia was associated with a significant increase in major post-operative complications (RR 1.61 95% CI 1.24-4.15 p = <0.00001) and 30-day mortality (RR 2.06 95% CI 1.02-4.17 p = 0.04). In addition, sarcopenia predicted 1-, 3- and 5-year survival (RR 1.61 95% CI 1.36-1.91 p = <0.0001, RR 1.45 95% CI 1.33-1.58 p = <0.0001, RR 1.25 95% CI 1.11-1.42 p = 0.0003, respectively) and 1- and 3-year disease-free survival (RR 1.30 95% CI 1.12-1.52 p = 0.0008). Conclusion: Peri-operative cross-sectional imaging may be utilised in order to predict those at risk of complications following abdominal surgery. These findings should be interpreted in the context of retrospectively collected data and no universal sarcopenic threshold. Targeted prehabilitation strategies aiming to reverse sarcopenia may benefit patients undergoing abdominal surgery. [ABSTRACT FROM AUTHOR]
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- 2017
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19. A meta-analysis of CXCL12 expression for cancer prognosis.
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Samarendra, Harsh, Jones, Keaton, Petrinic, Tatjana, Silva, Michael A, Reddy, Srikanth, Soonawalla, Zahir, and Gordon-Weeks, Alex
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Background:CXCL12 (SDF1) is reported to promote cancer progression in several preclinical models and this is corroborated by the analysis of human tissue specimens. However, the relationship between CXCL12 expression and cancer survival has not been systematically assessed.Methods:We conducted a systematic review and meta-analysis of studies that evaluated the association between CXCL12 expression and cancer survival.Results:Thirty-eight studies inclusive of 5807 patients were included in the analysis of overall, recurrence-free or cancer-specific survival, the majority of which were retrospective. The pooled hazard ratios (HRs) for overall and recurrence-free survival in patients with high CXCL12 expression were 1.39 (95% CI: 1.17-1.65, P=0.0002) and 1.12 (95% CI: 0.82-1.53, P=0.48) respectively, but with significant heterogeneity between studies. On subgroup analysis by cancer type, high CXCL12 expression was associated with reduced overall survival in patients with oesophagogastric (HR 2.08; 95% CI: 1.31-3.33, P=0.002), pancreatic (HR 1.54; 95% CI: 1.21-1.97, P=0.0005) and lung cancer (HR 1.37; 95% CI: 1.08-1.75, P=0.01), whereas in breast cancer patients high CXCL12 expression conferred an overall survival advantage (HR 0.5; 95% CI: 0.38-0.66, P<0.00001).Conclusions:Determination of CXCL12 expression has the potential to be of use as a cancer biomarker and adds prognostic information in various cancer types. Prospective or prospective-retrospective analyses of CXCL12 expression in clearly defined cancer cohorts are now required to advance our understanding of the relationship between CXCL12 expression and cancer outcome. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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20. Neutrophils promote hepatic metastasis growth through fibroblast growth factor 2-dependent angiogenesis in mice.
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Gordon‐Weeks, Alex N., Lim, Su Y., Yuzhalin, Arseniy E., Jones, Keaton, Markelc, Bostjan, Kim, K. Jin, Buzzelli, Jon N., Fokas, Emmanouil, Cao, Yunhong, Smart, Sean, and Muschel, Ruth
- Published
- 2017
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21. PD-L1 blockade enhances response of pancreatic ductal adenocarcinoma to radiotherapy.
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Azad, Abul, Yin Lim, Su, D'Costa, Zenobia, Jones, Keaton, Diana, Angela, Sansom, Owen J, Kruger, Philipp, Liu, Stanley, McKenna, W Gillies, Dushek, Omer, Muschel, Ruth J, and Fokas, Emmanouil
- Abstract
Pancreatic ductal adenocarcinoma ( PDAC) is considered a non-immunogenic tumor, and immune checkpoint inhibitor monotherapy lacks efficacy in this disease. Radiotherapy ( RT) can stimulate the immune system. Here, we show that treatment of KPC and Pan02 murine PDAC cells with RT and gemcitabine upregulated PD-L1 expression in a JAK/Stat1-dependent manner. In vitro, PD-L1 inhibition did not alter radio- and chemosensitivity. In vivo, addition of anti- PD-L1 to high (12, 5 × 3, 20 Gy) but not low (6, 5 × 2 Gy) RT doses significantly improved tumor response in KPC and Pan02 allografts. Radiosensitization after PD-L1 blockade was associated with reduced CD11b
+ Gr1+ myeloid cell infiltration and enhanced CD45+ CD8+ T-cell infiltration with concomitant upregulation of T-cell activation markers including CD69, CD44, and FasL, and increased CD8:Treg ratio. Depletion of CD8+ T cells abrogated radiosensitization by anti- PD-L1. Blockade of PD-L1 further augmented the effect of high RT doses (12 Gy) in preventing development of liver metastases. Exploring multiple mathematical models reveals a mechanism able to explain the observed synergy between RT and anti- PD-L1 therapy. Our findings provide a rationale for testing the use of immune checkpoint inhibitors with RT in PDAC. [ABSTRACT FROM AUTHOR]- Published
- 2017
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22. The dendritic cell-T helper 17-macrophage axis controls cholangiocyte injury and disease progression in murine and human biliary atresia.
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Lages, Celine S., Simmons, Julia, Maddox, Avery, Jones, Keaton, Karns, Rebekah, Sheridan, Rachel, Shanmukhappa, Shiva Kumar, Mohanty, Sujit, Kofron, Matthew, Russo, Pierre, Wang, Yui‐Hsi, Chougnet, Claire, and Miethke, Alexander G.
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- 2017
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23. Systematic Review and Meta-analysis of Current Experience in Treating IPNB.
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Gordon-Weeks, Alex N., Jones, Keaton, Harriss, Elinor, Smith, Adrian, and Silva, Michael
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- 2016
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24. Letters to the Editor.
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Coughlin, T. A., Jones, K. I., Lund, J. N., Jones, Keaton, Sugimoto, Kayo, Ogasahara, Yufu, Saito, Miwa, Fujita, Akiko, Takao, Toshihiro, Hendrick, P. A., Claydon, L. S., Sole, G., Conroy, J., Wassinger, C. A., Raza, Md. Tanveer, Vaidya, Pranav, Chandu, Ravi, Fan, A. P., Su, T. P., and Chen, Y. A.
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ALTERNATIVE education ,CURRICULUM ,MEDICAL students ,STUDY & teaching of medicine - Abstract
The article cites several studies related to medical education. One study reports that audio and video podcasts have been used by medical students. Another study demonstrates the impact of changes in curriculum on student learning. Moreover, another survey also determines how and to what extent medical schools in China use humanities and ethics in the training of future physicians.
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- 2011
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25. Tumour-Derived Laminin α5 (LAMA5) Promotes Colorectal Liver Metastasis Growth, Branching Angiogenesis and Notch Pathway Inhibition.
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Gordon-Weeks, Alex, Lim, Su Yin, Yuzhalin, Arseniy, Lucotti, Serena, Vermeer, Jenny Adriana Francisca, Jones, Keaton, Chen, Jianzhou, and Muschel, Ruth J.
- Subjects
DISEASE progression ,SURVIVAL ,LIVER tumors ,ENDOTHELIUM ,NEOVASCULARIZATION ,LAMININS ,ANIMAL experimentation ,INFLAMMATION ,METASTASIS ,NF-kappa B ,RNA ,COLORECTAL cancer ,CELLULAR signal transduction ,GENE expression ,TUMOR necrosis factors ,MEMBRANE proteins ,POLYMERASE chain reaction ,MICE ,ANTIGENS - Abstract
Hepatic metastatic growth is dependent upon stromal factors including the matrisomal proteins that make up the extracellular matrix (ECM). Laminins are ECM glycoproteins with several functions relevant to tumour progression including angiogenesis. We investigated whether metastatic colon cancer cells produce the laminins required for vascular basement membrane assembly as a mechanism for the promotion of angiogenesis and liver metastasis growth. qPCR was performed using human-specific primers to laminin chains on RNA from orthotopic human colorectal liver metastases. Laminin α5 (LAMA5) expression was inhibited in colon cancer cells using shRNA. Notch pathway gene expression was determined in endothelia from hepatic metastases. Orthotopic hepatic metastases expressed human laminin chains α5, β1 and γ1 (laminin 511), all of which are required for vascular basement membrane assembly. The expression of Laminin 511 was associated with reduced survival in several independent colorectal cancer cohorts and angiogenesis signatures or vessel density significantly correlated with LAMA5 expression. Colorectal cancer cells in culture made little LAMA5, but its levels were increased by culture in a medium conditioned by tumour-derived CD11b
+ myeloid cells through TNFα/NFκB pathway signalling. Down-regulation of LAMA5 in cancer cells impaired liver metastatic growth and resulted in reduced intra-tumoural vessel branching and increased the expression of Notch pathway genes in metastasis-derived endothelia. This data demonstrates a mechanism whereby tumour inflammation induces LAMA5 expression in colorectal cancer cells. LAMA5 is required for the successful growth of hepatic metastases where it promotes branching angiogenesis and modulates Notch signalling. [ABSTRACT FROM AUTHOR]- Published
- 2019
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- View/download PDF
26. Skype™: a platform for remote, interactive skills instruction.
- Author
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Dickson, Edward A, Jones, Keaton I, and Lund, Jonathan N
- Subjects
DISTANCE education ,AUDIOVISUAL aids in education ,MEDICAL education ,TEACHING methods ,PROFESSIONAL education ,ALTERNATIVE education ,AUDIOVISUAL materials ,LAPAROSCOPY ,STUDY & teaching of medicine ,CLINICAL competence ,WEBINARS ,EDUCATION - Abstract
The article presents information from a study on remote learning methods in medical education using the videoconferencing software Skype. It compares learning via traditional face-to-face instruction with learning via an audiovisual link accessed through Skype.
- Published
- 2016
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- View/download PDF
27. Radiation combined with macrophage depletion promotes adaptive immunity and potentiates checkpoint blockade.
- Author
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Jones, Keaton I, Tiersma, Jiske, Yuzhalin, Arseniy E, Gordon‐Weeks, Alex N, Buzzelli, Jon, Im, Jae Hong, and Muschel, Ruth J
- Abstract
Emerging evidence suggests a role for radiation in eliciting anti‐tumour immunity. We aimed to investigate the role of macrophages in modulating the immune response to radiation. Irradiation to murine tumours generated from colorectal (MC38) and pancreatic (KPC) cell lines induced colony‐stimulating factor 1 (CSF‐1). Coincident with the elevation in CSF‐1, macrophages increased in tumours, peaking 5 days following irradiation. These tumour‐associated macrophages (TAMs) were skewed towards an immunosuppressive phenotype. Macrophage depletion via anti‐CSF (aCSF) reduced macrophage numbers, yet only achieved tumour growth delay when combined with radiation. The tumour growth delay from aCSF after radiation was abrogated by depletion of CD8 T cells. There was enhanced recognition of tumour cell antigens by T cells isolated from irradiated tumours, consistent with increased antigen priming. The addition of anti‐PD‐L1 (aPD‐L1) resulted in improved tumour suppression and even regression in some tumours. In summary, we show that adaptive immunity induced by radiation is limited by the recruitment of highly immunosuppressive macrophages. Macrophage depletion partly reduced immunosuppression, but additional treatment with anti‐PD‐L1 was required to achieve tumour regression. Synopsis: Increased CSF‐1 is here observed in response to tumour irradiation. Subsequent recruitment of immunosuppressive macrophages rendered the tumour microenvironment resistant to immune‐mediated tumour cell killing. Blocking CSF‐1 reduced tumour‐associated macrophages and increased sensitivity to immune checkpoint blockade. Irradiation stimulates CSF‐1 secretion by tumour cells.Immunosuppressive macrophages are increased in the tumour microenvironment after irradiation.Macrophage depletion via anti‐CSF permits CD8+ T‐cell‐mediated tumour cell killing.Macrophage depleted tumours are more sensitive to immune checkpoint blockade. Increased CSF‐1 is here observed in response to tumour irradiation. Subsequent recruitment of immunosuppressive macrophages rendered the tumour microenvironment resistant to immune‐mediated tumour cell killing. Blocking CSF‐1 reduced tumour‐associated macrophages and increased sensitivity to immune checkpoint blockade. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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- View/download PDF
28. A meta-analysis of CXCL12 expression for cancer prognosis.
- Author
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Samarendra, Harsh, Jones, Keaton, Petrinic, Tatjana, Silva, Michael A, Reddy, Srikanth, Soonawalla, Zahir, and Gordon-Weeks, Alex
- Abstract
Background: CXCL12 (SDF1) is reported to promote cancer progression in several preclinical models and this is corroborated by the analysis of human tissue specimens. However, the relationship between CXCL12 expression and cancer survival has not been systematically assessed.Methods: We conducted a systematic review and meta-analysis of studies that evaluated the association between CXCL12 expression and cancer survival.Results: Thirty-eight studies inclusive of 5807 patients were included in the analysis of overall, recurrence-free or cancer-specific survival, the majority of which were retrospective. The pooled hazard ratios (HRs) for overall and recurrence-free survival in patients with high CXCL12 expression were 1.39 (95% CI: 1.17-1.65, P=0.0002) and 1.12 (95% CI: 0.82-1.53, P=0.48) respectively, but with significant heterogeneity between studies. On subgroup analysis by cancer type, high CXCL12 expression was associated with reduced overall survival in patients with oesophagogastric (HR 2.08; 95% CI: 1.31-3.33, P=0.002), pancreatic (HR 1.54; 95% CI: 1.21-1.97, P=0.0005) and lung cancer (HR 1.37; 95% CI: 1.08-1.75, P=0.01), whereas in breast cancer patients high CXCL12 expression conferred an overall survival advantage (HR 0.5; 95% CI: 0.38-0.66, P<0.00001).Conclusions: Determination of CXCL12 expression has the potential to be of use as a cancer biomarker and adds prognostic information in various cancer types. Prospective or prospective-retrospective analyses of CXCL12 expression in clearly defined cancer cohorts are now required to advance our understanding of the relationship between CXCL12 expression and cancer outcome. [ABSTRACT FROM AUTHOR]- Published
- 2017
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29. Dialogue vodcasts: a qualitative assessment.
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Jones, Keaton, Doleman, Brett, and Lund, Jonathan
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HIGHER education ,AUDIOVISUAL materials ,COMMUNICATION ,MEDICAL students ,STUDY & teaching of medicine ,QUESTIONNAIRES ,SCALE analysis (Psychology) ,STUDENT attitudes ,TEACHING methods ,THEMATIC analysis - Abstract
An abstract of the article "Dialogue Vodcasts: A Qualitative Assessment" by Keaton Jones et al. is presented.
- Published
- 2013
- Full Text
- View/download PDF
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