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Low ionic concentrations and the chemical stability of the ions involved to water are considered necessary for hydrated ionic solution lubricants. Herein, an ultra-high concentration of chemically active ZnCl2 aqueous solution (up to 20 mol L− 1) is first reported to be used as a liquid superlubricant, with trace amounts of Zn2+ hydrolyzed to generate Zn(OH)2 (i.e., hard clusters) in addition to Zn2+ hydrated with water (i.e., soft clusters), resulting in the formation of heterogeneous phases with a mixture of soft and hard clusters. The coefficient of friction (COF) inversely correlates with the molar concentration of ZnCl2, where the COF of the optimized samples can be as low as 0.006 with a stable macroscopic superlubricated state; the particle size distribution of clusters and their corresponding Spans, however, are positively correlated with the molar concentration, suggesting that asymmetric contact between these unequal-sized soft and hard clusters contributes greatly to the reduction of interfacial shear resistances. This ultra-high-concentration aqueous solution superlubricant not only breaks the convention but also deepens the mechanism of liquid superlubricity from the perspectives of cluster size distribution and interactions between clusters, providing a new insight into the design of advanced water-based ionic solution superlubricants. [ABSTRACT FROM AUTHOR]

Adding additives (e.g., carbon dots, CDs) to liquid lubricants is an effective method for enhancing their load‐bearing capacity and friction reduction. However, it is challenging to simultaneously impart high load‐bearing capacity and superlubricity for them (e.g., ionic liquid analogs, ILAs) through this strategy due to strong Coulombic interactions. With CDs as a competing ligand operon, the cluster size distribution can be expanded, conferring superlubricity with ultrahigh load‐bearing capacity (>705 MPa, the highest value of CDs‐based superlubricious materials thus far) for CDs/ILAs. In particular, methodologies such as Raman, 1H‐NMR, fourier transform infrared spectroscopy, and laser particle size analysis are employed to characterize the evolution of their H‐bonding interactions and particle size distribution. CDs can act as competing ligands and enable CDs/ILAs to form systems with ultra‐low coefficient of friction and wear consisting of a mixture of large and small clusters. The mixed and expanded size clusters facilitate the reduction of the viscosity for CDs/ILAs under shear, thereby reducing the interfacial shear resistance during superlubricity, while the CDs within them efficiently transfer the normal bearing loads. The progress is made from the perspective of cluster particle size distribution rather than individual additive properties, providing a new avenue for designing ILAs‐based superlubricious materials. [ABSTRACT FROM AUTHOR]

Soil salinization is a serious problem leading to ecological degradation. Melia azedarach is highly salt‐tolerant, and its application to saline‐alkali land is a promising strategy for restoring degraded lands. However, most studies only focus on the salt‐reducing effect of herbs on saline‐alkali land, and there are few studies on the metabolic adaptation mechanism of trees in the process of soil restoration in coastal saline‐alkali land. In this study, we analyzed the soil properties and metabolome of M. azedarach roots grown in low‐ (<3 g/kg; L), medium‐ (5 ~ 8 g/kg; M), and high‐ (>10 g/kg; H) salinity soils to explore the amelioration effect and adaptation mechanism of M. azedarach to soils with differential salinity. Cultivation of M. azedarach was associated with a decrease in the concentration of Na+ and increases in organic matter content and alkaline phosphatase and urease activities in the rhizosphere soil. The metabolome analysis revealed that a total of 382 (ESI+) and 277 (ESI−) differential metabolites (DEMs) were detected. The number of DEMs in roots rose with increased soil salinity, such as sugars and flavonoids in H versus L, and amino acids in M versus L. The most up‐regulated DEMs were 13‐S‐hydroxyoctadecadienoic acid, 2′‐Deoxyuridine, and 20‐hydroxyleukotriene B4. Combined analysis of soil properties and M. azedarach DEMs indicated that alkaline phosphatase activity was positively correlated with traumatic acid concentration. Taken together, these results indicate that M. azedarach has the potential to reduce soil salinity and enhance soil enzyme activity, and it can adapt to salt stress by regulating metabolites like sugars, amino acids, and flavonoids. This study provides a basis for understanding the mechanism underlying the adaptation of M. azedarach to saline‐alkali soil and its amelioration. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Applied Ecology is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Intense human activities break the grassland–livestock balance and accelerate grassland degradation. We evaluated the use of native dominant species combined with arbuscular mycorrhizal fungi (AMF) in order to recover grassland and restrain grassland degradation. We conducted a full factorial greenhouse experiment to evaluate the interaction effects of native species of distinct traits grass Lolium perenne (L) and legume Trifolium repens (T) with arbuscular mycorrhizal fungi (AMF) inoculation on grass productivity and soil properties across non-degraded, lightly degraded, and severely degraded soils. The grass–legume mixture was manipulated with five ratios (T:L = 1:0, T:L = 1:1, T:L = 3:1, T:L = 1:3, T:L = 0:1). The results showed that L. perenne significantly increased grassland productivity at different grass–legume ratios, regardless of AMF presence or absence. AMF inoculation increased plant N and P content uptake and improved the productivity of degraded grasslands, especially in severely degraded grasslands. The NO3−-N and available P concentrations increased in soil when the legume component increased from T:L = 0:1 (grass monoculture) to T:L = 1:0 (legume monoculture). This may be because the presence of Lolium perenne (L) can promote nitrogen fixation in legumes. Structural equation modeling indicated that grass–legume mixtures directly affected plant biomass, whereas AMF affected plant biomass via providing plant nutrients. A soil quality index based on minimum datasets indicated a significant positive effect of artificial grassland establishment on soil quality. We conclude that planting T:L = 0:1 and T:L = 1:3 combined with AMF inoculation can be used to recover degraded grassland production, and planting T:L = 1:1 and T:L = 1:3 plus AMF inoculation can be applied for grassland nutrient accumulation and stability maintenance. [ABSTRACT FROM AUTHOR]

A trait-based approach is adopted to understand the responses of the soil nematode food web following cover crops incorporated into the soil, i.e., afterlife effect of plant. We conducted an in situ microcosm experiment with two cover crops including leguminous Astragalus sinicus L. (A. sinicus), characterized by high nutrient content, and gramineous Lolium multiflorum Lam (L. multiflorum), characterized by high C and lignin content, representing the acquisitive and conservative side of the economic spectrum, respectively. Furthermore, two incorporation rates were set to represent low and high biomass production of cover crops that could be incorporated into the soil. Soil main microbial groups, nematode food web, and physicochemical properties were analyzed at weeks 4 and 18 after cover crops incorporated into the soil. Results showed that, regardless of time, cover crops affected the abundance and composition of the soil nematode food web. L. multiflorum supported higher nematode abundance and more complex nematode food web than A. sinicus, charactering with higher fungivore/bacterivore, predator/prey, maturity index, and structure index, particularly under the high incorporation rates. In addition, A. sinicus improved much more resource availability (mineral N and dissolved organic C) than L. multiflorum. Together, the quantity and quality of plant residues jointly drive soil food web structure, and a trait-based framework facilitates the mechanical understanding of afterlife effect of plant on soil ecosystems. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Applied Ecology is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Soil has become a major hotspot of biodiversity studies, yet the pattern and timing of the evolution of soil organisms are poorly known because of the scarcity of paleontological data. To overcome this limitation, we conducted a genome-based macroevolutionary study of an ancient, diversified, and widespread lineage of soil fauna, the elongate-bodied springtails (class Collembola, order Entomobryomorpha). To build the first robust backbone phylogeny of this previously refractory group, we sampled representatives of major higher taxa (6 out of 8 families, 11 out of 16 subfamilies) of the order with an emphasis on the most problematic superfamily Tomoceroidea, applied whole-genome sequencing methods, and compared the performance of different combinations of data sets (universal single-copy orthologs [USCO] vs. ultraconserved elements]) and modeling schemes. The fossil-calibrated timetree was used to reconstruct the evolution of body size, sensory organs, and pigmentation to establish a time frame of the ecomorphological divergences. The resultant trees based on different analyses were congruent in most nodes. Several discordant nodes were carefully evaluated by considering method fitness, morphological information, and topology test. The evaluation favored the well-resolved topology from analyses using USCO amino acid matrices and complex site-heterogeneous models (CAT |$+$| GTR and LG |$+$| PMSF (C60)). The preferred topology supports the monophyletic superfamily Tomoceroidea as an early-diverging lineage and a sister relationship between Entomobryoidea and Isotomoidea. The family Tomoceridae was recovered as monophyletic, whereas Oncopoduridae was recovered as paraphyletic, with Harlomillsia as a sister to Tomoceridae and hence deserving a separate family status as Harlomillsiidae Yu and Zhang fam. n. Ancestral Entomobryomorpha were reconstructed as surface-living, supporting independent origins of soil-living groups across the Paleozoic–Mesozoic, and highlighting the ancient evolutionary interaction between aboveground and belowground fauna. [Collembola; phylogenomics; soil-living adaptation; whole-genome sequencing.] [ABSTRACT FROM AUTHOR]

Anthropogenic land use is threatening global biodiversity. As one of the most abundant animals on Earth, nematodes occupy several key positions in belowground food webs and contribute to many ecosystem functions and services. However, the effects of land use on nematode abundance and its determinants remain poorly understood at a global scale.To characterize nematodes' responses to land use across trophic groups, we used a dataset of 6,825 soil samples globally to assess how nematode abundance varies among regional land‐use types (i.e. primary vegetation, secondary vegetation, pasture, cropland and urban) and local land‐use intensities (i.e. human‐managed or not). We also quantified the interactive effects of land use and environmental predictors (i.e. mean annual temperature, annual precipitation, soil organic carbon, soil pH, global vegetation biomass and global vegetation productivity) on nematode abundance.We found that total nematode abundance and the abundance of bacterivores, fungivores, herbivores, omnivores and predators generally increased or were not affected under management across land‐use types. Specifically, the most numerically abundant bacterivores were higher in managed than in unmanaged secondary vegetation habitats and urban areas, and herbivores were more abundant in managed than in unmanaged primary and secondary vegetation habitats. Furthermore, the numbers of significant environmental predictors of nematode abundance were reduced and the magnitude and the direction of the predictors were changed under management. We also found that nematode abundance was more variable and less determined by environmental factors in urban than in other land‐use types.These findings challenge the view that human land use decreases animal abundance across trophic groups, but highlight that land use is altering the trophic composition of soil nematodes and its relationships with the environment at the global scale. [ABSTRACT FROM AUTHOR]

Soil fauna plays irreplaceable roles in delivering ecosystem functions in the face of climate change and human activities. Understanding how soil fauna-mediated processes change following environmental stresses is therefore critical to the maintenance of ecosystem services. This study assessed the soil functional capability, as measured by short-term decomposition of plant residues, subjected to simulated copper and heat stress in the presence, or absence, of enchytraeids (Enchytraeus florentinus) in an arable soil. Results showed that enchytraeid density decreased to 37%, 10%, and 5% of the initial density at the end of the experiment in the control, copper, and heat treatments, respectively. Soil functional capability increased in the presence of enchytraeids, but only in the stressed soils and not apparently in the controls. Fungal biomass was increased in the presence of enchytraeids particularly in the control soil. The enchytraeids did not affect water extractable organic C (WEOC) and total extractable N (TEN) in the control; however, they increased TEN in both stressed soils and WEOC in the copper stressed soil. We found that the enchytraeid effects on functional capability were positively related to the proportions of dead enchytraeids throughout the experiment duration. We infer that the contribution of enchytraeids to soil functional capability was mainly due to the after-life effects, most possibly through three potential mechanisms including (1) enhancement of microbial activity with resource contributed from their dead bodies, (2) through microhabitat improvement established before their death, and (3) microbiome composition changes derived from live or dead enchytraeids. We conclude by our case as an example that soil fauna could sustain key ecosystem functions under adverse conditions, highlighting the importance of soil biodiversity conservation in a changing world. [ABSTRACT FROM AUTHOR]

Purpose: Roots bridge aboveground and belowground systems, and play a pivotal role in structuring root-associated organisms via influencing food resources and habitat conditions. Most studies focused on the relationships between plant identity and root-associated organisms, however, little is known about how root traits affect nematode communities within the rhizosphere. Methods: We investigated the relationships between root traits of four plant species and nematode abundance, community structure and trophic complexity in an ex-arable field. Results: While the relative abundance of herbivores was negatively associated with specific root length (SRL), specific root area (SRA), root length density (RLD) and root C: N ratio, free-living nematodes were positively affected by these traits, implying a multifaceted effect of root traits on root-associated organisms. Importantly, we found that finer root systems promoted the complexity of rhizosphere nematode community, by increasing the relative abundance of high trophic-level nematodes (i.e., omnivores and predators) and enhancing nematode diversity. Conclusions: Our findings suggest that root traits could comprehensively shape soil community structure and interactions, and provide new insights into soil biodiversity conservation and functional maintenance. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Ecology is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Although straw-decomposing microbial inoculants (SDMI) are capable to generally promote the fertility of straw-amended soils, their impact on the release of individual soil major nutrients remains controversial. Additionally, the combined effects of SDMI and environment/management on various forms of nutrients remain poorly documented. To fill these research gaps, we conducted a meta-analysis study using 1214 paired observations from 132 field trials in China. Our results showed that SDMI significantly increases the total and available concentrations of nitrogen, phosphorus, and potassium in soil (p < 0.05), although increases in nutrients varied with different conditions. Moreover, mean annual precipitation (MAP) had significant correlations with the effects of SDMI-amended straw on soil total nitrogen (p = 0.008) and available nitrogen (p = 0.0006). The effect of SDMI-amended straw on soil total phosphorus and soil available potassium was mainly correlated with soil organic matter (p = 0.032) and MAP (p = 0.049), respectively. Our findings indicate that SDMI-amended straw can have a measurable impact on the status of soil major nutrients. In particular, the application of SDMI-amended rice straw with an initial C/N ratio of ≤15 to neutral soils in temperate and subtropical monsoon climates is a promising strategy. [ABSTRACT FROM AUTHOR]

Inoculum size contributes to the invasion potential of pathogens in the soil. However, the role of inoculum size in determining the fate of pathogens in disturbed soils remains unclear. Herein, we investigated the survival rates of a bacterial pathogen, Ralstonia solanacearum, in soils subjected to heat as a simulated disturbance. Our results revealed that heating increased soil resource availability but reduced resource differentiation between R. solanacearum and indigenous bacterial communities. In both non-heated and heated soils, invader abundances increased with inoculum size, with a greater magnitude in heated soils. Inoculum size and heat-induced increases in soil-available carbon and nitrogen best predicted invasion success. Altogether, our findings suggested that the invasion by soil pathogens could be predicted by synergies between heat perturbation and inoculum size. [ABSTRACT FROM AUTHOR]

Two greenhouse experiments using soils from long-term field plots were carried out to test whether and how soil factors modulated by organic amendments feed back to rice plant growth and defense against an aboveground herbivore, the planthopper Nilaparvata lugens. Using factorial combinations of sterilized soil and soil inocula obtained from chemically amended plots (i.e., control treatment) or chemically plus organically amended plots (i.e., organic treatment), we disentangled the effects of biotic and abiotic soil properties on plant and planthopper performance. We found that, compared with abiotic soil properties, soil biological factors were the main drivers in regulating plant growth performance. Specifically, soil biota that are shaped by the organic treatment had high microbial abundance and diversity and enhanced rice plant tolerance (i.e., increasing plant total biomass) and resistance (i.e., decreasing amino acid and sugar concentrations) to planthoppers. Moreover, the organic treatment simultaneously increased plant growth and defense against planthoppers, which could be explained by high soil nutrient availability driven by soil biota. Our results demonstrate the importance of synergistic effects of soil biota and soil abiotic factors on plant growth and resistance to herbivory. These findings are important for better understanding the mechanisms and impacts of ecological intensification as well as the potential of steering soil communities to reduce the use of chemical fertilizers and pesticides and further optimize crop production. [ABSTRACT FROM AUTHOR]

Biochar application is perceived as a promising agricultural technology, but risk evaluation on the soil ecosystem has focused exclusively on soil microbes, whether microfood-web is likewise influenced by biochar remains unclear. We carried out a pot experiment planted with rapeseed for 2 years to test how biochar application (0, 20, 60 t ha−1), with or without nitrogen (N) fertilizer (0, 60, 120 t ha−1), affected soil microbes and microfauna (protists and nematodes). We observed that a high amount of biochar (60 t ha−1) increased crop productivity, microbial activity, and biomass carbon (C) and N, as well as the abundance of flagellates (protists), but decreased the abundances of bacterivorous, fungivorous, and herbivorous nematodes as well as the abundance of amoebae (protists). High biochar addition rates also shifted nematode community composition toward a fungivore dominance, and favored herbivores by decreasing the ratio of microbivorous to herbivorous nematodes. However, N fertilizer and its interaction with biochar generally had no effect on microbial activity and biomass as well as the abundance of protist and nematode. A structural equation model revealed that the effects of biochar on soil biota were largely direct, which might depend on biochar properties (e.g., pore size and alkalinity), whereas indirect effects, mediated by crop, soil pH, soil moisture, and polycyclic aromatic hydrocarbon (PAH) concentration, generally had no effect on soil biota. We conclude that biochar is a suitable soil amendment for increasing crop growth, but its detrimental effect on multitrophic levels of soil fauna calls for an identification of the optimal application rate and size fraction that could minimize potential negative effects on certain soil communities. [ABSTRACT FROM AUTHOR]

Both contemporary and historical factors are documented to be crucial in regulating species diversity and distribution. Soil fauna contribute substantially to global biodiversity and ecosystem functioning, while it is unclear whether and to what extent historical factors shape their diversity patterns. Here, we used soil nematodes as a model organism to test historical effects on soil fauna and to investigate the relative importance of climatic, soil, and historical factors. Based on nematode distribution data in 16 natural sites at a large scale (ranging from 22 to 40°N) in mainland China, we conducted elastic net regression model to test the effects of climatic (e.g., mean and seasonality of temperature/precipitation), soil (e.g., soil carbon, nitrogen, and pH), and historical (e.g., temperature/precipitation anomaly and the velocity of the change since the Last Glacial Maximum) variables on nematode genus richness and Shannon's diversity. Additionally, variation partitioning was used to determine the contribution of the three predictor sets to the explanation of both Jaccard and Bray–Curtis community dissimilarity. We found that climate generally explained more variations in both diversity and composition than soil and historical predictors in our samples. We also showed that although historical factors (e.g., temperature change velocity) were correlated with nematode diversity and composition, the pure effects of these historical factors were negligible. In other words, the historical effects were commonly represented by their interactions with current climatic and soil factors within our selected sites. Our results indicated that contemporary factors, especially climate, may outperform historical factors in regulating soil nematode diversity patterns at large scales. [ABSTRACT FROM AUTHOR]

Risk assessment and ecological effects are a concern of transgenic rice. In this study, the effects of three lines of Bt rice expressing single Cry1Ab protein (Kemingdao: cv. KMD) and fused Cry1Ab/Cry1Ac proteins (Huahui 1: cv. HH1; Bt Shanyou 63: cv. Bt-SY63) on soil mite community were investigated under field conditions. Transgenic treatment (cv. Bt-rice vs. non-Bt rice) significantly decreased the community index of Margalef's richness (SR) of soil mite in KMD, and significantly increased the abundance and the community indexes of Shannon diversity (H'), Pielou's evenness (J) and SR of soil mite in Bt-SY63 (p < 0.05). Transgene type (cv. KMD vs. HH1) did not significantly affect the composition, abundance and the community index (p > 0.05). Breeding type (cv. HH1 vs. Bt-SY63) significantly changed the composition and markedly improved the abundance and the J value in Bt-SY63 (p < 0.05). However, seasonal and inter-annual changes were apparent, and the Bt effects were not consistent at all for the different plant backgrounds over a 2-year period. These results suggested that the cultivation of Bt rice has a significant but transient effect on soil mite community. [ABSTRACT FROM AUTHOR]

Summary: Soil organic carbon (SOC) sequestration under elevated CO2 concentration (eCO2) is a function of carbon (C) input and C retention. Nitrogen (N) limitation in natural ecosystems can constrain plant responses to eCO2 and their subsequent effects on SOC, but the effect of eCO2 on SOC in N‐enriched agroecosystems with cultivars highly responsive to eCO2 is largely unknown.We reported results of SOC dynamics from a field free‐air CO2 enrichment experiment with two rice cultivars having distinct photosynthetic capacities under eCO2. A reciprocal incubation experiment was further conducted to disentangle the effect of changes in litter quality and soil microbial community on litter‐derived C dynamics.eCO2 significantly increased total SOC content, dissolved organic C and particulate organic C under the strongly responsive cultivar, likely due to enhanced organic C inputs originated from CO2 stimulation of shoot and root biomass. Increases in the residue C : N ratio and fungal abundance induced by eCO2 under the strongly responsive cultivar reduced C losses from decomposition, possibly through increasing microbial C use efficiency.Our findings suggest that applications of high‐yielding cultivars may substantially enhance soil C sequestration in rice paddies under future CO2 scenarios. [ABSTRACT FROM AUTHOR]

Anthropogenic conversion of natural to agricultural land reduces aboveground biodiversity. Yet, the overall consequences of land‐use changes on belowground biodiversity at large scales remain insufficiently explored. Furthermore, the effects of conversion on different organism groups are usually determined at the taxonomic level, while an integrated investigation that includes functional and phylogenetic levels is rare and absent for belowground organisms. Here, we studied the Earth's most abundant metazoa—nematodes—to examine the effects of conversion from natural to agricultural habitats on soil biodiversity across a large spatial scale. To this aim, we investigated the diversity and composition of nematode communities at the taxonomic, functional, and phylogenetic level in 16 assemblage pairs (32 sites in total with 16 in each habitat type) in mainland China. While the overall alpha and beta diversity did not differ between natural and agricultural systems, all three alpha diversity facets decreased with latitude in natural habitats. Both alpha and beta diversity levels were driven by climatic differences in natural habitats, while none of the diversity levels changed in agricultural systems. This indicates that land conversion affects soil biodiversity in a geographically dependent manner and that agriculture could erase climatic constraints on soil biodiversity at such a scale. Additionally, the functional composition of nematode communities was more dissimilar in agricultural than in natural habitats, while the phylogenetic composition was more similar, indicating that changes among different biodiversity facets are asynchronous. Our study deepens the understanding of land‐use effects on soil nematode diversity across large spatial scales. Moreover, the detected asynchrony of taxonomic, functional, and phylogenetic diversity highlights the necessity to monitor multiple facets of soil biodiversity in ecological studies such as those investigating environmental changes. [ABSTRACT FROM AUTHOR]

Long‐term chemical‐only fertilisation (NPK) decreases soil pH, but this soil acidification is rarely reported with manure fertilisation (M). Soil acidification always leads to a negative effect on sustainable development. As oxalate oxidation is accompanied by soil alkalisation, it is still unknown how and to what extent bacterial oxalate oxidation in soils with different fertilisation regimes contributes to buffering of soil acidification. To assess the potential role of oxalotrophy in buffering soil acidification, two soils that underwent contrasted fertilisation regimes for over 30 years were used. The oxalotrophic communities were characterised based on a biomarker of oxalotrophic taxa (the frc gene), and their responsiveness to calcium oxalate (CaOx) addition was assessed. In addition, stable isotope probing was employed to explore the active bacteria responding to CaOx addition. Despite similar abundances of oxalotrophic bacteria between NPK and M soils before microcosm incubation, the M soil harboured more oxalotrophic bacteria belonging to Deltaproteobacteria, and the NPK soil was colonised by more oxalotrophic bacteria affiliated with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria. In the incubation experiments, the M soil took half of the time that the NPK soil needed to deplete the added CaOx. The faster CaOx consumption rate could be explained by the higher functional redundancy and higher proportion of fast‐response oxalotrophic taxa in M soil. The most dominant active oxalotrophic taxa were Oxalicibacterium and Burkholderia in the M and NPK soils, respectively. Furthermore, the better performance of oxalate oxidation was conjectured to contribute to a higher soil acidification buffering ability. This study obtained an important cue to the feasibility of active oxalotrophic taxa in buffering acidification in soils with different fertilisation regimes, which provides valuable evidence for exploring alternative ways for alleviating soil acidification. [ABSTRACT FROM AUTHOR]

Transgenic Bacillus thuringiensis (Bt) rice extends significant protection against insect pests and meets the increasing demands for food and energy. Many studies have been conducted investigating the impacts of Bt rice to the agricultural ecosystem, but much less attention has been given to efforts attempting to determine how the presence of Bt rice influences and shapes the microbial community, especially the active microbes. Stable isotope probing and high-throughput sequencing were employed to explore the active microbes involved in Bt-containing straw decomposition. Compared to its near isoline, the Bt straw contained higher contents of total N, total P, total K, lignin, cellulose, and Cry1Ab toxin protein. These chemical differences did not affect the decomposition rate but significantly changed the active microbial decomposer communities. During the decomposition of Bt-containing straw, fungi were more affected than bacteria. Agromyces, Terrabacter, Microbacterium, Glycomyces, and Kribbella were the most representative unique (existed only in the Bt treatments and appeared at the early stage) bacterial genera, and Trichoderma was the most representative unique fungal genus in the Bt straw decomposition. By using similarity index calculation and function prediction, the significant differences between Bt straw and non-Bt straw treatments were found to be transient for both microbial taxa and functional traits. These results suggested that Bt rice has a significant but transient impact on soil microbes in terms of microbial straw decomposition. [ABSTRACT FROM AUTHOR]

The intra-aggregate architecture of soil macroaggregates provides suitable microhabitats for nematodes to graze on microorganisms. However, it is not fully clear how nematodes and microbial communities interactively mediate soil organic carbon (SOC) turnover. Here, we aimed to illustrate the relationships between nematodes, microbial community, and SOC turnover in the macroaggregates of a red soil receiving long-term manure application. Soil macroaggregates (>2 mm) were sampled from an 11-year field experiment including four manure treatments: no manure (M0), low manure rate (M1), high manure rate (M2), and high manure rate with lime (M3). The abundances of nematodes and microbial communities were substantially increased under manure treatments. Bacterivores dominated under the M2 and M3 treatments, while plant parasites were enriched under the M1 treatment. Phospholipid fatty acid analysis indicated that the ratio of bacteria to fungi significantly increased, but the ratio of Gram-positive bacteria to Gram-negative bacteria declined with the increasing manure addition. Random forest modeling showed that soil porosity had a primary effect on nematode assemblages, while pH and SOC contributed profoundly to the structure of the microbial community and carbon metabolic capacity. Structural equation modeling suggested that nematode grazing promoted carbon metabolic activities predominantly due to increased microbial biomass. Taken together, the mechanistic understanding of nematode-microorganism interactions may have important implications for improving soil fertility by nematode-mediated microbial processes. [ABSTRACT FROM AUTHOR]

Abstract: An increasing number of studies indicate that microbial diversity plays a crucial role in the mediation of ecosystem multifunctionality (EMF) in natural ecosystems. However, this point remains mostly overlooked in managed ecosystems, especially in agriculture. Here, we compiled promising strategies for the targeted exploitation of the associations between microbial diversity and EMF of agricultural soils using samples from two long‐term (more than 30 years) experimental field sites in southern China. The two sites experienced a similar monsoon climate and fertilization management practices. We used high‐throughput amplicon sequencing, structural equation modelling and random forest analysis, to analyse our data and validate our hypotheses. We found that soil physiochemical properties and the C‐, N‐, P‐ and S‐cycle enzyme activities were increased with the increase in microbial diversity. Specifically, a positive linear relationship was observed between microbial diversity and EMF, which was mediated by long‐term fertilization management via changes in soil microbial communities and physiochemical properties. Random forest analysis and SEM showed that the important role of microbial diversity on EMF was maintained even when simultaneously taking multiple multifunctionality drivers (soil physiochemical properties, soil aggregation and enzymatic patterns) into account. In addition, microbial diversity, C‐cycle enzyme activity and pH value are feasible predictors of EMF; these factors were shown to be the main drivers of EMF of arable soils. Our findings suggest that there may be a limited degree of multifunctional redundancy in arable soils. The relationship we observed between microbial diversity and EMF suggests that management practices that foster more diverse soil microbial communities may have the potential to improve the functioning of agroecosystems. A plain language summary is available for this article. [ABSTRACT FROM AUTHOR]

We conducted a microcosm experiment with soil being sterilized, reinoculated with native microbial community and subsequently manipulated the bacterivorous nematodes, including three treatments: without (CK) or with introducing one species of the two bacterivores characterized with different body size but similar c-p (colonizer-persister) value ( Rhabditis intermedia and Protorhabditis oxyuroides, accounted for 6 and 59% of bacterivores in initially undisturbed soil, respectively). We monitored the NO and CO emissions, soil properties, and especially quantified gross N transformation rates using N tracing technique after the 50 days incubation. No significant differences were observed on soil NH and NO concentrations between the CK and two bacterivores, but this was not the case for gross N transformation rates. In comparison to CK, R. intermedia did not affect soil N transformation rates, while P. oxyuroides significantly increased the rates of mineralization of organic N to NH , oxidation of NH to NO , immobilization of NO to organic N and dissimilatory NO reduction to NH . Furthermore, the mean residence time of NH and NO pool was greatly lowered by P. oxyuroides, suggesting it stimulated soil N turnover. Such stimulatory effect was unrelated to the changes in abundance of bacteria and ammonia-oxidizing bacteria (AOB). In contrast to CK, only P. oxyuroides significantly promoted soil NO and CO emissions. Noticeably, bacterivores increased the mineralization of recalcitrant organic N but decreased soil δC and δN values, in particular for P. oxyuroides. Combining trait-based approach and isotope-based analysis showed high potential in moving forward to a mechanistic understanding of bacterivore-mediated N cycling. [ABSTRACT FROM AUTHOR]

Abstract: Subterranean detritivores such as earthworms can increase soil nutrient availability through their burrowing and casting activities. A number of recent studies have explored whether these changes caused by earthworms may in turn affect plant performance and resistance to herbivores, but no formal synthesis of this literature has been conducted to date. We tested for the effects of earthworms on plant growth, resistance and chemical defences against insect herbivores by performing a meta‐analysis of the existing literature up to 2016. We also explored ecological factors that might explain among‐studies variation in the magnitude of the earthworm effects on plant growth and resistance. We found that earthworm presence increases plant growth (by 20%) and nitrogen content (by 11%). Overall, earthworms did not affect plant resistance against chewing herbivores (caterpillars, slugs and rootworms), and even led to a 22% decrease in plant resistance against phloem‐feeding herbivores (aphids). However, earthworm presence increased production of chemical defences by 31% when plants where attacked by cell‐feeders (thrips), and resulted in an 81% increase in resistance against thrips. The magnitude of earthworm effects was stronger when earthworm inoculations consisted of a mix of species and ecological types, and when densities of earthworms were high. These results suggest that earthworm presence is an important factor underlying natural variation in plant defences against herbivores, and call for a better integration of the soil fauna in the studies of plant‐herbivore interaction, both for applied and fundamental research. A plain language summary is available for this article. [ABSTRACT FROM AUTHOR]

Insecticidal crystal (Cry) proteins produced by transgenic Bacillus thuringiensis (Bt) rice that enter the soil via root exudation and plant residues may be harmful to non-target soil organisms. We conducted a 3-year field investigation to determine if soil nematode abundance and diversity were affected by exposure to two transgenic Bt rice cultivars, compared to their non-transgenic near isolines. Near isolines were Kemingdao (KMD-Bt) expressing the single Cry1Ab gene and its non-Bt near isoline Xiushui-11 (XSD), as well as Huahui-1 (HH-Bt) expressing the fused Cry1Ab/Cry1Ac gene and its non-Bt near isoline Minghui-63 (MH). Nematode variables including community composition, abundance, trophic groups, and most of the common genera differed significantly between the rice cultivars. However, these nematode variables were similar under transgenic Bt rice and its non-Bt near isoline, although higher Shannon's index value and Pielou's index value were found in soils planted with Bt rice than the non-Bt near isoline. During this 3-year field study, gene modification (single Cry1Ab gene and fused Cry1Ab/Cry1Ac gene) supports a more uniform distribution of nematode species but had no effect on soil nematode abundance and community composition. We conclude that continuous cultivation of KMD-Bt and HH-Bt rice varieties for 3 years is not detrimental to soil nematode communities under field conditions. [ABSTRACT FROM AUTHOR]

Tomoceridae is common but among the most problematic groups of Collembola. Its position within Collembola and the relationships within the family remain obscure. This also extends to the generic division of the subfamily Tomocerinae that remains controversial. This study examines these issues by integrating both molecular and morphological evidence. Our molecular phylogeny based on rDNA sequences supports the monophyly of Tomoceridae and the sister relationship between Tomocerinae and Lepidophorellinae. Reconstructions and tree topology tests constraining monophyly did not resolve the relationships between Tomoceridae and other collembolan groups. We also examined the morphology of the first instar (primary) larvae, which has significant phylogenetic value among higher Collembola. Mapping primary chaetotaxy onto our molecular phylogeny provided further evidence for the unique position of Tomoceridae within Entomobryomorpha and Collembola. The monophyly and subfamilial classification within Tomoceridae were validated here, whereas its position among Collembola will need further studies in a broader consideration across the major collembolan orders. Within Tomocerinae, the monophyly of Pogonognathellus was demonstrated, but the status of Tomocerus and Tomocerina is still to be resolved. [ABSTRACT FROM AUTHOR]

In agricultural ecosystems, most crop cultivars are bred for pest resistance with the aim of resisting aboveground herbivores, but it is unclear if this resistance also affects abundance, composition, and activity of underground pests and content of soil labile pools. A fully factorial greenhouse experiment was carried out, using four rice cultivars with distinct resistance to shoot herbivore brown planthopper, Nilaparvata lugens, with and without rice root nematodes, Hirschmanniella spp., to test two hypotheses: (1) rice cultivars resistant to brown planthopper are more susceptible to rice root nematodes and (2) rice root nematodes of resistant cultivars cause greater modification of labile pools of rhizosphere soil than those of susceptible cultivars by inducing more leakage of plant metabolites. Nematode abundance, soluble sugar and soluble amino acid contents of plant, and microbial biomass C and N, dissolved organic C and N, and soluble sugar and amino acid contents of rhizosphere soil were analyzed. The abundance of rice root nematodes substantially increased under all rice cultivars following root nematode inoculation. Rice cultivar resistance to brown planthopper did not affect the numbers of rice root nematodes but decreased negative effects of nematodes on root growth, shoot soluble sugar and amino acid contents, and labile pools of rhizosphere soil, probably implying that integrated complex mechanisms other than only resource allocation were involved in rice resistance to aboveground and belowground herbivores. Our study will contribute to a better understanding of aboveground-belowground interactions and to the development of integrated pest managements by considering belowground ecosystem responses in crop systems. [ABSTRACT FROM AUTHOR]

A soil culture experiment was conducted to determine whether a plant hormone, indole-3-acetic acid (IAA), could influencefluoranthene(Flu) removal from soil. Four treatments were utilized: (i) unplanted soil (CK), (ii) soil planted with ryegrass (P), (iii) soil planted with ryegrass and treated with 0.24 mg kg−1IAA (P+0.24), (iv) soil planted with ryegrass and treated with 2.4 mg kg−1IAA (P+2.4). The Flu initial concentration was 200 mg kg−1. After 3 months, the percentage of Flu removal and plant root biomass were significantly increased under the P+2.4 and the removal rate was 35.68%. The total Flu content in plants was higher than that in the other treatments. The Flu concentration was significantly increased in the shoots, but not significantly altered in the roots. The highest translocation factor was observed in the P+2.4. Increase in number of bacteria, actinomycetes and fungi were observed in the planted treatments, and the amount of fungi was significantly increased in P+2.4. Flu removal was related to the Flu in ryegrass, and was insignificantly correlated with the stimulation of soil microflora, which suggesting that IAA may work mainly on improving plant growth, the Flu uptake, and eventually leading to enhanced remediation of Flu polluted soil. [ABSTRACT FROM PUBLISHER]

The aims of the present study were to compare the toxic effects of benzo[ a]pyrene (B aP) and to screen for rapid and sensitive biomarkers that can be used to assess the environmental risks of B aP in earthworms in different natural soil types. The authors exposed Eisenia fetida to 2 types of soil (red soil and fluvo-aquic soil) spiked with different concentrations (0 mg kg−1, 1 mg kg−1, 10 mg kg−1, 100 mg kg−1, and 500 mg kg−1) of B aP for 7 d or 14 d. Benzo[ a]pyrene-induced weight variation altered the activities of antioxidant enzymes (superoxide dismutase [SOD]; catalase [CAT]; and guaiacol peroxidase [POD]) and changed the content of malondialdehyde (MDA). In addition, using the comet assay, the authors determined the DNA damage in earthworms. The results revealed that the comet assay was suitable for evaluating the genotoxicity of B aP in the soil, even at the lowest examined concentration. The MDA content was the least sensitive indicator of B aP toxicity. A 3-way analysis of variance (ANOVA) was used to determine whether the soil type, exposure concentration, and duration affected the B aP toxicity. The antioxidant enzyme activities and the MDA content were shown to be significantly correlated with the exposure concentration. The percentage of weight variation ( p < 0.001), CAT activity ( p < 0.05), and SOD activity ( p < 0.01) were significantly affected by the soil type, and the POD activity ( p < 0.01), CAT activity ( p < 0.001), and SOD activity ( p < 0.001) were significantly affected by the exposure duration. Therefore, measuring DNA damage in earthworms is a simple and efficient means of assessing B aP genotoxicity in a terrestrial environment, and the effects of the soil type and exposure time on the other parameters that were investigated in E. fetida, which were used as responsive biomarkers, should be considered. Environ Toxicol Chem 2014;9999:1-8. © 2014 SETAC [ABSTRACT FROM AUTHOR]

The differences in soil inorganic-nitrogen (N) concentration and distribution, plant biomass, and root growth in the presence or absence of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) under different urea-application methods (placement versus homogeneously applied) were explored in a short-term microcosm experiment. Spring wheat ( Triticum aestivum L.) was grown in a microcosm with six different treatments: no amendment (CK), DMPP homogeneously applied (DMPP-hom), urea homogeneously applied (Urea-hom), urea with DMPP homogeneously applied (Urea + DMPP-hom), urea placement (Urea-place), and urea with DMPP placement (Urea + DMPP-place). After 28 d, plant biomass, soil inorganic nitrogen content, distribution of soil inorganic nitrogen and plant roots in the soil were analyzed. The soil inorganic N and plant roots tended to be distributed asymmetrically in the placement treatment but were distributed symmetrically in the homogeneous treatment. DMPP addition significantly increased the soil NH $ _4^+ $-N content and decreased the NO $ _3^- $-N content, especially near the fertilized zones in the placement treatment. Compared to the urea-only treatments, DMPP application significantly increased the shoot biomass and root lengths of the wheat in the homogeneous treatment but decreased them in the placement treatment. Therefore, homogeneously applied urea and DMPP may produce a more uniform nutrient distribution, leading to greater nitrogen retention in the soil and thus accelerating wheat growth. [ABSTRACT FROM AUTHOR]

Background and Aims: The importance of aboveground herbivores for modifying belowground ecosystems has prompted numerous studies; however, studies can be biased by context dependent conditions which lead to extremely inconsistent results. So far, the impacts of herbivory intensity by important rice pests on rice paddy soil ecosystems are lacking. The aim of this study was to test the hypothesis that intermediate herbivory intensity of the brown planthopper ( Nilaparvata lugens Stål) could promote soil labile resources and microbial biomass, while high intensity would show a reverse pattern, by mediating rice plant growth. This study will also help the development of integrative pest management. Methods: Four hopper infestation density treatments (0, 4, 8 and 12 nymphs per rice plant) and two infestation duration treatments (9 and 15 days after N. lugens infestation, DAI 9 and DAI 15) were established in a glasshouse experiment. Soil and plant were sampled destructively from four replicates and analysed for soil labile resources availability, soil microbial biomass and plant performance, respectively. Results: The infestation density significantly affected both shoot and root mass of rice ( P < 0.05), soil dissolved organic carbon (DOC) and nitrogen (DON), and microbial biomass carbon (MBC) and nitrogen (MBN), and the effects were further enhanced by prolonged infestation duration. Compared to the control (CK) without N. lugens, plant dry mass, DOC, DON, MBC and MBN increased under low (LD) and moderate hopper densities (MD) but decreased under high density (HD) on DAI 9. Moreover, the LD treatment exerted the most promotional effects on DAI 15. Rice root to shoot ratio generally increased in treatments subjected to herbivory. The labile resources and microbial biomass showed close relationships with both shoot and root mass across treatments, in particular with root mass on DAI 15. Such a trend indicated that the shift of photosynthate allocation to belowground contributed to changes of soil resource availability and microbial biomass. Conclusions: Intermediate herbivory intensity showed positive effects on rice seedling performance and, further, promoted soil labile resource availability and microbial biomass. The importance of extrapolating temporal and spatial scale, i.e. from the short-term greenhouse experiment to an entire rice growing season in the field, was highlighted. [ABSTRACT FROM AUTHOR]

The effect of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) on N transformations and composition of ammonia-oxidizing bacteria (AOB) communities was investigated at the centimeter scale in a microcosm experiment under laboratory conditions. After 28 days, samples were collected from soil treated with urea or urea and DMPP at increasing distance from the fertilizer zone; this distance ranged from 0 to 5 cm in both horizontal and vertical directions. The results showed that DMPP application significantly increased soil pH and NH-N and mineral N (NH-N, NO-N, and NO-N) concentrations but decreased (NO + NO)-N concentration, and such effect was decreased by increasing the distance from the fertilizer zone. Fingerprint profiles of denaturing gradient gel electrophoresis showed that the number of bands decreased by increasing the distance from the fertilizer zone due to decreasing NH-N concentrations in the urea treatment. Compared to urea applied alone, DMPP application increased NH-N concentrations and decreased AOB diversity from 0 to 3 cm but promoted diversity from 3 to 5 cm distance from the fertilizer zone. A phylogenetic analysis showed that AOB communities were dominated by Nitrosospira cluster 3. Therefore, the nitrification inhibitor DMPP modified the composition of AOB communities by increasing the distance from the fertilizer zone and this probably was related to the changes in soil pH and inorganic N concentration. [ABSTRACT FROM AUTHOR]

Purpose: Prometryne with moderate to low mobility in soil is a ubiquitous environmental pollutant in water and soil. Bioremediation is widely used to remove pollutants from contaminated soil. Bacterial-feeding nematodes have been tested on the decomposition of soil organic matter and the release of nutrients through their interaction with soil microorganisms, but little attention has been paid to their effects on the removal of herbicides in soil. In this study, we investigated the effects of bacterial-feeding nematodes ( Cephalobus Bastian) on the dissipation of prometryne and microbial activity in prometryne contaminated soil. Materials and methods: Cultured with prometryne for a period of 6 months, prometryne-degrading bacteria strains P-1 and P-2 were isolated from sediments obtained from Anhui Huaxing Chemical Industry Co., Ltd. (Anhui Province, China). Bacterial-feeding nematodes were reared on Nematode Growth Medium agar plates (NGM) supplemented with prometryne for 5 months. Gnotobiotic microcosm experiments were conducted by inoculating both nematodes and prometryne-degrading bacteria strains P-1 ( Ochrobactrum sp.) and P-2 ( Bacillus sp.) into the contaminated soil. Soil samples were analyzed for prometryne concentration, the number of bacteria and nematodes, basal soil respiration, and enzyme activities. Results and discussion: The results show that (1) about 50-66% of the prometryne is dissipated in the treatments with nematodes and the dissipation rate is raised by 5-7% compared with the treatments without nematodes. The nematodes have positive effects on the dissipation of prometryne through their interaction with bacteria in soil; (2) the nematode grazing can increase the population size of bacteria; and (3) the introduction of nematodes can enhance basal soil respiration and soil enzyme activities, that is, soil microbial activity. Conclusions: The inoculation of nematodes enhanced microbial activity in contaminated soils and accelerated the dissipation of prometryne, and thus nematodes can be used in restoration of contaminated sites by accelerating pollutants dissipation in the future. [ABSTRACT FROM AUTHOR]

Avoiding soil degradation and improving crop productivity could be achieved by performing sustainable soil nutrient management with an appropriate understanding of soil properties' spatial variability. The present fertilizer recommendations for the region where the study area is located are typically symmetric for large regions. This leads to the under-application of fertilizers in zones with low nutrient contents and over-application in zones with high nutrient contents. Therefore, this study was conducted to assess soil management zones (MZs) in the study area for effective soil nutrient management and to evaluate soil properties' spatial variability. A total of 100 geo-referenced soil samples were collected at a depth of 0–20 cm, processed and analyzed for pH, available nitrogen (AN), available phosphorus (AP), available potassium (AK), soil organic carbon (SOC), total nitrogen (TN) and total phosphorous (TP), while C:N, C:P and N:P ratios were calculated. Soil properties' coefficients of variation (CVs) widely varied from low (1.132%) to moderate (45.748%). Ordinary kriging and semi-variogram analysis showed differed spatial variability patterns for the studied soil properties with spatial dependence ranged from weak to strong. MZs were delineated by performing principal component analysis (PCA) and fuzzy K-means clustering. Four PCs with eigen values more than 1 dominated 84.44% of the total variance, so they were retained for clustering analysis. Three MZs were delineated based on the two criteria modified partition entropy (MPE) and fuzzy performance index (FPI). The studied soil properties differed significantly among MZs. Thus, the methodology used for MZ delineation could be used effectively for soil site-specific nutrient management for avoiding soil degradation concurrently with maximizing crop production in the study area. [ABSTRACT FROM AUTHOR]

This paper has been retracted. [ABSTRACT FROM AUTHOR]

Bacterial persisters are phenotypic variants that tolerate exposure to lethal antibiotics. These dormant cells are responsible for chronic and recurrent infections. Multiple mechanisms have been linked to persister formation. Here, we report that a complex, consisting of an extracellular poly(dC) and its membrane-associated binding protein RmlB, appears to be associated with persistence of the opportunistic pathogen Pseudomonas aeruginosa. Environmental stimuli triggers a switch in the complex physiological state (from poly(dC)/RmlB to P-poly(dC)/RmlB or RmlB). In response to the switch, bacteria decrease proton motive force and intracellular ATP levels, forming dormant cells. This alteration in complex status is linked to a (p)ppGpp-controlled signaling pathway that includes inorganic polyphosphate, Lon protease, exonuclease VII (XseA/XseB), and the type III secretion system. The persistence might be also an adaptive response to the lethal action of the dTDP-L-rhamnose pathway shutdown, which occurs due to switching of poly(dC)/RmlB. The mechanisms underlying bacterial persisters formation remain poorly understood. Here, Chen et al. identify a complex formed by extracellular poly(dC) and the binding protein RmlB that controls Pseudomonas aeruginosa persister formation in response to environmental stimuli. [ABSTRACT FROM AUTHOR]