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The objectives of this study were to test an artificial substrate sampler method for aquaculture ponds and assess the water quality based on the benthic macroinvertebrate community living in fishpond sediment at four farms with tilapia production in the Baixa Mogiana region of São Paulo State, Brazil. Benthic macroinvertebrates were monitored every 15 days for 3 months. Approximately 500,000 organisms distributed in 47 taxa were collected. Chironomidae, Glossiphonidae, Hirudinidae, Libelullidae, Oligochaeta, and Polycentropodidae were present in all collected samples, with the dominance of Chironomidae in the benthic community. Polycentropodidae, a sensitive family to organic pollution, had a greater abundance in fish farms with better environmental conditions. Significant differences in dissolved oxygen and pH were observed among fishponds at different fish farms. Biomonitoring with artificial substrate is a simple and low-cost alternative to monitoring water quality of tilapia culture in fishponds. The artificial substrate sampling method was effective, but the evaluation of more critical conditions of water quality would improve the method and enhance the knowledge of taxa and ecology of macrobenthic organisms in fishponds. [ABSTRACT FROM AUTHOR]

The potential of optical remote sensing data to identify, map and monitor croplands is well recognized. However, clouds strongly limit the usefulness of optical imagery for these applications. This paper aims at assessing cloud cover conditions over four states in the tropical and sub-tropical Center-South region of Brazil to guide the development of an appropriate agricultural monitoring system based on Landsat-like imagery. Cloudiness was assessed during overlapping four months periods to match the typical length of crop cycles in the study area. The percentage of clear sky occurrence was computed from the 1 km resolution MODIS Cloud Mask product (MOD35) considering 14 years of data between July 2000 and June 2014. Results showed high seasonality of cloud occurrence within the crop year with strong variations across the study area. The maximum seasonality was observed for the two states in the northern part of the study area (i.e., the ones closer to the Equator line), which also presented the lowest averaged values (15%) of clear sky occurrence during the main (summer) cropping period (November to February). In these locations, optical data faces severe constraints for mapping summer crops. On the other hand, relatively favorable conditions were found in the southern part of the study region. In the South, clear sky values of around 45% were found and no significant clear sky seasonality was observed. Results underpin the challenges to implement an operational crop monitoring system based solely on optical remote sensing imagery in tropical and sub-tropical regions, in particular if short-cycle crops have to be monitored during the cloudy summer months. To cope with cloudiness issues, we recommend the use of new systems with higher repetition rates such as Sentinel-2. For local studies, Unmanned Aircraft Vehicles (UAVs) might be used to augment the observing capability. Multi-sensor approaches combining optical and microwave data can be another option. In cases where wall-to-wall maps are not mandatory, statistical sampling approaches might also be a suitable alternative for obtaining useful crop area information. [ABSTRACT FROM AUTHOR]

Only well-chosen segmentation parameters ensure optimum results of object-based image analysis (OBIA). Manually defining suitable parameter sets can be a time-consuming approach, not necessarily leading to optimum results; the subjectivity of the manual approach is also obvious. For this reason, in supervised segmentation as proposed by Stefanski et al. (2013) one integrates the segmentation and classification tasks. The segmentation is optimized directly with respect to the subsequent classification. In this contribution, we build on this work and developed a fully autonomous workflow for supervised object-based classification, combining image segmentation and random forest (RF) classification. Starting from a fixed set of randomly selected and manually interpreted training samples, suitable segmentation parameters are automatically identified. A sub-tropical study site located in São Paulo State (Brazil) was used to evaluate the proposed approach. Two multi-temporal Landsat 8 image mosaics were used as input (from August 2013 and January 2014) together with training samples from field visits and VHR (RapidEye) photo-interpretation. Using four test sites of 15 × 15 km2 with manually interpreted crops as independent validation samples, we demonstrate that the approach leads to robust classification results. On these samples (pixel wise, n ≈ 1 million) an overall accuracy (OA) of 80% could be reached while classifying five classes: sugarcane, soybean, cassava, peanut and others. We found that the overall accuracy obtained from the four test sites was only marginally lower compared to the out-of-bag OA obtained from the training samples. Amongst the five classes, sugarcane and soybean were classified best, while cassava and peanut were often misclassified due to similarity in the spatio-temporal feature space and high within-class variabilities. Interestingly, misclassified pixels were in most cases correctly identified through the RF classification margin, which is produced as a by-product to the classification map. [ABSTRACT FROM AUTHOR]