8 results on '"Brian Henry"'
Search Results
2. Design-rules for stapled peptides with in vivo activity and their application to Mdm2/X antagonists
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Arun Chandramohan, Hubert Josien, Tsz Ying Yuen, Ruchia Duggal, Diana Spiegelberg, Lin Yan, Yu-Chi Angela Juang, Lan Ge, Pietro G. Aronica, Hung Yi Kristal Kaan, Yee Hwee Lim, Andrea Peier, Brad Sherborne, Jerome Hochman, Songnian Lin, Kaustav Biswas, Marika Nestor, Chandra S. Verma, David P. Lane, Tomi K. Sawyer, Robert Garbaccio, Brian Henry, Srinivasaraghavan Kannan, Christopher J. Brown, Charles W. Johannes, and Anthony W. Partridge
- Subjects
Science - Abstract
Abstract Although stapled α-helical peptides can address challenging targets, their advancement is impeded by poor understandings for making them cell permeable while avoiding off-target toxicities. By synthesizing >350 molecules, we present workflows for identifying stapled peptides against Mdm2(X) with in vivo activity and no off-target effects. Key insights include a clear correlation between lipophilicity and permeability, removal of positive charge to avoid off-target toxicities, judicious anionic residue placement to enhance solubility/behavior, optimization of C-terminal length/helicity to enhance potency, and optimization of staple type/number to avoid polypharmacology. Workflow application gives peptides with >292x improved cell proliferation potencies and no off-target cell proliferation effects ( > 3800x on-target index). Application of these ‘design rules’ to a distinct Mdm2(X) peptide series improves ( > 150x) cellular potencies and removes off-target toxicities. The outlined workflow should facilitate therapeutic impacts, especially for those targets such as Mdm2(X) that have hydrophobic interfaces and are targetable with a helical motif.
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- 2024
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3. Quantifying Recent Storm-Induced Change on a Small Fetch-Limited Barrier Island along North Carolina’s Crystal Coast Using Aerial Imagery and LiDAR
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Hannah Sirianni, Matthew J. Sirianni, David J. Mallinson, Niels L. Lindquist, Lexia M. Valdes-Weaver, Michael Moody, Brian Henry, Christopher Colli, Brian Rubino, Manuel Merello Peñalver, and Carter Henne
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barrier islands ,fetch-limited ,LiDAR ,aerial imagery ,storms ,change detection ,Environmental sciences ,GE1-350 ,Harbors and coast protective works. Coastal engineering. Lighthouses ,TC203-380 ,Geography (General) ,G1-922 - Abstract
Barrier islands within sheltered environments are an important natural defense from severe storm impacts for coastal communities worldwide. Despite their importance, these fetch-limited barrier islands remain understudied and their ability to withstand and recover from storms is not well-understood. Here, we present a case study of Sugarloaf Island in North Carolina that demonstrates the operational use of openly accessible LiDAR and aerial imagery data to quantify synoptic habitat, shoreline, and volumetric change between 2014 and 2020, a period that encompasses four hurricanes and a winter storm event. During this time period, our results show: (1) an 11–13% decrease in marsh and shrub habitat, (2) an average landward shoreline migration of 2.9 m yr−1 and up to 5.2 m yr−1 in extreme areas, and (3) a net volume loss of approximately 9800 m3. The results of this study highlight the importance of storms as a driver of morphologic change on Sugarloaf Island and have implications for better understanding the resiliency of fetch-limited barrier islands to storms. This work helps to enhance prerestoration data availability and supports knowledge-based decision-making regarding habitat change, erosional issues, and the efficacy of nature-based solutions to increase the resiliency of a coastal community in North Carolina.
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- 2022
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4. STUB1 is an intracellular checkpoint for interferon gamma sensing
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Simon Ng, Shuhui Lim, Adrian Chong Nyi Sim, Ruban Mangadu, Ally Lau, Chunsheng Zhang, Sarah Bollinger Martinez, Arun Chandramohan, U-Ming Lim, Samantha Shu Wen Ho, Shih Chieh Chang, Pooja Gopal, Lewis Z. Hong, Adam Schwaid, Aaron Zefrin Fernandis, Andrey Loboda, Cai Li, Uyen Phan, Brian Henry, and Anthony W. Partridge
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Medicine ,Science - Abstract
Abstract Immune checkpoint blockade (ICB) leads to durable and complete tumour regression in some patients but in others gives temporary, partial or no response. Accordingly, significant efforts are underway to identify tumour-intrinsic mechanisms underlying ICB resistance. Results from a published CRISPR screen in a mouse model suggested that targeting STUB1, an E3 ligase involved in protein homeostasis, may overcome ICB resistance but the molecular basis of this effect remains unclear. Herein, we report an under-appreciated role of STUB1 to dampen the interferon gamma (IFNγ) response. Genetic deletion of STUB1 increased IFNGR1 abundance on the cell surface and thus enhanced the downstream IFNγ response as showed by multiple approaches including Western blotting, flow cytometry, qPCR, phospho-STAT1 assay, immunopeptidomics, proteomics, and gene expression profiling. Human prostate and breast cancer cells with STUB1 deletion were also susceptible to cytokine-induced growth inhibition. Furthermore, blockade of STUB1 protein function recapitulated the STUB1-null phenotypes. Despite these encouraging in vitro data and positive implications from clinical datasets, we did not observe in vivo benefits of inactivating Stub1 in mouse syngeneic tumour models—with or without combination with anti-PD-1 therapy. However, our findings elucidate STUB1 as a barrier to IFNγ sensing, prompting further investigations to assess if broader inactivation of human STUB1 in both tumors and immune cells could overcome ICB resistance.
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- 2022
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5. Exquisitely Specific anti-KRAS Biodegraders Inform on the Cellular Prevalence of Nucleotide-Loaded States
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Shuhui Lim, Regina Khoo, Yu-Chi Juang, Pooja Gopal, Huibin Zhang, Constance Yeo, Khong Ming Peh, Jinkai Teo, Simon Ng, Brian Henry, and Anthony W. Partridge
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Chemistry ,QD1-999 - Published
- 2020
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6. Inferring the dysconnection syndrome in schizophrenia: Interpretational considerations on methods for the network analyses of fMRI data
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Brian Henry Silverstein, Steven L Bressler, and Vaibhav A. Diwadkar
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Schizophrenia ,brain networks ,connectivity analysis ,fMRI methods ,Dysconnection syndrome ,Psychiatry ,RC435-571 - Abstract
Schizophrenia has long been considered one of the most intractable of psychiatric conditions. Its etiology is likely polygenic, and its symptoms the result of complex network-level changes in neuronal activity. While easily identifiable by psychiatrists based on clear behavioral signs, the biological substrate of the disease remains poorly understood. Here we discuss current trends and key concepts in the theoretical framework surrounding schizophrenia, and critically discuss brain network approaches applied to neuroimaging data that can illuminate the correlates of the illness. We take the approach of generating a theoretical framework from early principles of brain function, neural units, and build to the highly relevant and practical perspective of network function. Next, we outline the strengths and limitations of several fMRI-based analytic methodologies for assessing in vivo brain network function, including undirected and directed functional connectivity and effective connectivity. The underlying assumptions of each approach for modeling fMRI data are treated in some quantitative detail, allowing for assessment of the utility of each for generating inferences about brain networks relevant to schizophrenia. fMRI and the analyses of fMRI signals provides a limited, yet vibrant platform from which to test specific hypotheses about brain network dysfunction in schizophrenia. Carefully considered and applied connectivity measures have the power to illuminate loss or change of function at the network level, thus providing insight into the underlying neurobiology which gives rise to the emergent symptoms seen in the altered cognition and behavior of schizophrenia patients.
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- 2016
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7. Distinct BOLD fMRI Responses of Capsaicin-Induced Thermal Sensation Reveal Pain-Related Brain Activation in Nonhuman Primates.
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Abu Bakar Ali Asad, Stephanie Seah, Richard Baumgartner, Dai Feng, Andres Jensen, Elaine Manigbas, Brian Henry, Andrea Houghton, Jeffrey L Evelhoch, Stuart W G Derbyshire, and Chih-Liang Chin
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Medicine ,Science - Abstract
BACKGROUND:Approximately 20% of the adult population suffer from chronic pain that is not adequately treated by current therapies, highlighting a great need for improved treatment options. To develop effective analgesics, experimental human and animal models of pain are critical. Topically/intra-dermally applied capsaicin induces hyperalgesia and allodynia to thermal and tactile stimuli that mimics chronic pain and is a useful translation from preclinical research to clinical investigation. Many behavioral and self-report studies of pain have exploited the use of the capsaicin pain model, but objective biomarker correlates of the capsaicin augmented nociceptive response in nonhuman primates remains to be explored. METHODOLOGY:Here we establish an aversive capsaicin-induced fMRI model using non-noxious heat stimuli in Cynomolgus monkeys (n = 8). BOLD fMRI data were collected during thermal challenge (ON:20 s/42°C; OFF:40 s/35°C, 4-cycle) at baseline and 30 min post-capsaicin (0.1 mg, topical, forearm) application. Tail withdrawal behavioral studies were also conducted in the same animals using 42°C or 48°C water bath pre- and post- capsaicin application (0.1 mg, subcutaneous, tail). PRINCIPAL FINDINGS:Group comparisons between pre- and post-capsaicin application revealed significant BOLD signal increases in brain regions associated with the 'pain matrix', including somatosensory, frontal, and cingulate cortices, as well as the cerebellum (paired t-test, p
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- 2016
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8. Investigation of cross-species translatability of pharmacological MRI in awake nonhuman primate - a buprenorphine challenge study.
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Stephanie Seah, Abu Bakar Ali Asad, Richard Baumgartner, Dai Feng, Donald S Williams, Elaine Manigbas, John D Beaver, Torsten Reese, Brian Henry, Jeffrey L Evelhoch, and Chih-Liang Chin
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Medicine ,Science - Abstract
BACKGROUND: Pharmacological MRI (phMRI) is a neuroimaging technique where drug-induced hemodynamic responses can represent a pharmacodynamic biomarker to delineate underlying biological consequences of drug actions. In most preclinical studies, animals are anesthetized during image acquisition to minimize movement. However, it has been demonstrated anesthesia could attenuate basal neuronal activity, which can confound interpretation of drug-induced brain activation patterns. Significant efforts have been made to establish awake imaging in rodents and nonhuman primates (NHP). Whilst various platforms have been developed for imaging awake NHP, comparison and validation of phMRI data as translational biomarkers across species remain to be explored. METHODOLOGY: We have established an awake NHP imaging model that encompasses comprehensive acclimation procedures with a dedicated animal restrainer. Using a cerebral blood volume (CBV)-based phMRI approach, we have determined differential responses of brain activation elicited by the systemic administration of buprenorphine (0.03 mg/kg i.v.), a partial µ-opioid receptor agonist, in the same animal under awake and anesthetized conditions. Additionally, region-of-interest analyses were performed to determine regional drug-induced CBV time-course data and corresponding area-under-curve (AUC) values from brain areas with high density of µ-opioid receptors. PRINCIPAL FINDINGS: In awake NHPs, group-level analyses revealed buprenorphine significantly activated brain regions including, thalamus, striatum, frontal and cingulate cortices (paired t-test, versus saline vehicle, p
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- 2014
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