1. Unveiling the Brazilian kefir microbiome: discovery of a novel Lactobacillus kefiranofaciens (LkefirU) genome and in silico prospection of bioactive peptides with potential anti-Alzheimer properties.
- Author
-
Silva MH, Batista LL, Malta SM, Santos ACC, Mendes-Silva AP, Bonetti AM, Ueira-Vieira C, and Dos Santos AR
- Subjects
- Brazil, Humans, Molecular Docking Simulation, Amyloid beta-Peptides metabolism, Amyloid beta-Peptides genetics, Amyloid Precursor Protein Secretases metabolism, Aspartic Acid Endopeptidases genetics, Aspartic Acid Endopeptidases metabolism, Metagenomics methods, Kefir microbiology, Alzheimer Disease, Lactobacillus genetics, Genome, Bacterial, Microbiota, Peptides chemistry, Peptides pharmacology
- Abstract
Background: Kefir is a complex microbial community that plays a critical role in the fermentation and production of bioactive peptides, and has health-improving properties. The composition of kefir can vary by geographic localization and weather, and this paper focuses on a Brazilian sample and continues previous work that has successful anti-Alzheimer properties. In this study, we employed shotgun metagenomics and peptidomics approaches to characterize Brazilian kefir further., Results: We successfully assembled the novel genome of Lactobacillus kefiranofaciens (LkefirU) and conducted a comprehensive pangenome analysis to compare it with other strains. Furthermore, we performed a peptidome analysis, revealing the presence of bioactive peptides encrypted by L. kefiranofaciens in the Brazilian kefir sample, and utilized in silico prospecting and molecular docking techniques to identify potential anti-Alzheimer peptides, targeting β-amyloid (fibril and plaque), BACE, and acetylcholinesterase. Through this analysis, we identified two peptides that show promise as compounds with anti-Alzheimer properties., Conclusions: These findings not only provide insights into the genome of L. kefiranofaciens but also serve as a promising prototype for the development of novel anti-Alzheimer compounds derived from Brazilian kefir., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF