3,295 results on '"Electrophoresis, Starch Gel"'
Search Results
2. Transferrin polymorphism and opportunistic infections in HIV-infected women in Rwanda.
- Author
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Masaisa F, Gahutu JB, Mukiibi J, Delanghe J, and Philippé J
- Subjects
- Adult, Cross-Sectional Studies, Electrophoresis, Starch Gel, Female, HIV Infections complications, Humans, Middle Aged, Rwanda, AIDS-Related Opportunistic Infections genetics, HIV Infections genetics, Polymorphism, Genetic, Transferrin genetics
- Abstract
Objective: We investigated the prevalence of opportunistic infections in HIV-infected women according to transferrin (TF) phenotype., Methods: We conducted a cross-sectional study among 200 HIV-positive women in the Butare University Teaching Hospital in Rwanda. TF phenotypes were determined using starch gel electrophoresis., Results: Phenotype frequencies of TF CD, CB and CC were 14.5, 3 and 82.5%, respectively. The homozygous TF DD phenotype was not found. Subjects with TF CD phenotype had a significantly higher prevalence of opportunistic infections than subjects with TF CC phenotype, 76 and 52%, respectively (p = 0.026). In logistic regression, there was a significant correlation between TF phenotypes and opportunistic infections (p = 0.012). Subjects with TF CD phenotype had significantly lower values for TF (p = 0.006) than TF CC subjects. Hematological parameters (RBC, RBC indices, hemoglobin, hematocrit, WBC, neutrophils, lymphocytes, platelets and erythrocyte sedimentation rate), iron, ferritin, TF saturation, C-reactive protein and CD4 count did not differ according to TF phenotype., Conclusion: Subjects with TF CC phenotype have a lower prevalence of opportunistic infections. Iron status may play a role in this association., (Copyright © 2012 S. Karger AG, Basel.)
- Published
- 2012
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3. Adenylate kinase locus 1 polymorphism and feto-placental development.
- Author
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Fulvia GB, Antonio P, Anna N, Patrizia S, Ada A, Egidio B, and Andrea M
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- Adenylate Kinase chemistry, Adenylate Kinase genetics, Alleles, Birth Weight, Electrophoresis, Starch Gel, Female, Fetal Blood enzymology, Gestational Age, Humans, Infant, Newborn, Italy, Male, Organ Size, Pregnancy, Adenylate Kinase metabolism, Fetal Development, Placentation, Polymorphism, Genetic
- Abstract
Objective: Recently our group has found that the correlation between birth weight and placental weight - an index of a balanced feto-placental unit development - is influenced by genetic factors. Since adenylate kinase locus 1 (AK₁) is a polymorphic enzyme that plays an important role in the synthesis of nucleotides required for many metabolic functions, we have investigated the possible role of its genetic variability in the correlation between birth weight and placental weight., Study Design: 342 consecutive healthy newborn infants from the population of Rome (Italy) and 286 puerperae from another population from Central Italy were studied., Results: The correlation coefficient between birth weight and placental weight is much higher in infants with low activity AK₁2-1 phenotype than in those with high activity AK₁1 phenotype. The difference between AK₁ and AK₁2-1 is well marked only in newborns with a gestational age greater than 38 weeks and it is not influenced by sex, maternal age and maternal smoking. A similar pattern is observed with maternal AK₁ phenotype., Conclusions: These results suggest that the difference in enzymatic activity between AK₁ phenotypes influencing the equilibrium among ATP, ADP, AMP and adenosine could have an important role in a balanced development of feto-placental unit., (Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2011
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4. Consequences of habitat fragmentation for the prairie-endemic weevil Haplorhynchites aeneus.
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Kluger EC, Berlocher SH, Tooker JF, and Hanks LM
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- Animals, Conservation of Natural Resources, Ecosystem, Electrophoresis, Starch Gel, Food Preferences, Gene Flow, Genetic Variation, Illinois, Larva enzymology, Larva genetics, Larva growth & development, Larva physiology, Population Dynamics, Reproduction, Seasons, Species Specificity, Weevils enzymology, Weevils genetics, Weevils growth & development, Asteraceae physiology, Weevils physiology
- Abstract
Widespread destruction of tallgrass prairies in the midwestern United States has fragmented plant communities with the result that populations of endemic animal species have become geographically isolated from one another. The goal of the research summarized here was to evaluate the potential for conserving endemic prairie species of herbivorous insects by managing their host plants. Our study species was the weevil Haplorhynchites aeneus (Boehman), adults of which feed on pollen of plants in the genus Silphium (Asteraceae: Heliantheae). The female weevils clip the peduncles of flower heads and oviposit into the heads, where the larvae feed on the ovules. The research was conducted in 12 prairie sites in eastern Illinois. An allozyme analysis revealed that most populations of H. aeneus at the various prairie sites were genetically differentiated from one another, but the degree of differentiation was not associated with geographic distance between sites. Adult H. aeneus fed and oviposited on the plant species Silphium laciniatum L., S. integrifolium Michx., and S. terebinthinaceum Jacq, which differ in bloom phenology. There was no evidence of genetic differentiation of weevil populations with respect to host plant species, and adult weevils strongly preferred S. terebinthinaceum. We conclude that the oligophagous nature of the weevil assures its survival in small prairie remnants even where some of the host plant species are absent. Although H. aeneus can have a significant impact on reproduction of host plants by clipping flower heads, the perennial nature of Silphium species prevents their local extinction.
- Published
- 2011
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5. Characterization of a novel Entamoeba histolytica strain from Burkina Faso, Africa, possessing a unique hexokinase-2 gene.
- Author
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Suzuki J, Kobayashi S, Imada M, Tolba ME, and Takeuchi T
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- Alleles, Amino Acid Sequence, Amino Acid Substitution, Animals, Base Sequence, Burkina Faso, Cricetinae, Electrophoresis, Starch Gel, Entamoeba histolytica enzymology, Entamoeba histolytica pathogenicity, Genotype, Hexokinase metabolism, Humans, Isoelectric Focusing, Isoenzymes genetics, Isoenzymes metabolism, Mesocricetus, Polymorphism, Genetic, Sequence Homology, Substrate Specificity, Entamoeba histolytica genetics, Hexokinase genetics, Liver Abscess, Amebic parasitology
- Abstract
An Entamoeba histolytica strain (BF-841 cl1) that originated from Burkina Faso, Africa presented with novel, polymorphic genotypes of the serine-rich E. histolytica protein and the anodic hexokinase‑2 (HXK-2) isoenzyme band, which showed less electrophoretic mobility than that of an E. histolytica reference strain [HM-1:IMSS cl6 (zymodeme (Z)-II)] by starch gel electrophoresis and isoelectric focusing (IEF). The HXK-2 gene of BF-841 cl1 had amino acid variations at four positions compared to the sequence of HM-1:IMSS cl6. These variations were absent from the sequences of four other E. histolytica strains with different zymodemes [KU27 (Z-II), SAW1627 (Z-IIa-), SAW755CR clB (Z-XIV), and KU2 (Z-XIX)]. The results of IEF showed no difference in the substrate specificity of HXK (HXK-1 and HXK-2) between BF-841 cl1 and the three reference E. histolytica strains (HM-1:IMSS cl6, SAW755 clB, and KU27). It was also confirmed that BF-841 cl1 was able to form liver abscesses in Syrian hamsters.
- Published
- 2011
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6. Characterization of two closely related α-amylase paralogs in the bark beetle, Ips typographus (L.).
- Author
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Viktorinova I, Kucerova L, Bohmova M, Henry I, Jindra M, Dolezal P, Zurovcova M, and Zurovec M
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- Amino Acid Sequence, Animals, Base Sequence, Cloning, Molecular, Coleoptera genetics, Electrophoresis, Polyacrylamide Gel, Electrophoresis, Starch Gel, Insect Proteins genetics, Isoenzymes genetics, Isoenzymes metabolism, Molecular Sequence Data, Phylogeny, RNA, Messenger metabolism, alpha-Amylases genetics, Coleoptera enzymology, Insect Proteins metabolism, Sequence Homology, Amino Acid, alpha-Amylases metabolism
- Abstract
Ips typographus (L.), the eight-spined spruce bark beetle, causes severe damage throughout Eurasian spruce forests and suitable nuclear markers are needed in order to study its population structure on a genetic level. Two closely related genes encoding α-amylase in I. typographus were characterized and named AmyA and AmyB. Both α-amylase paralogs consisted of six exons and five introns. AmyA encodes a polypeptide of 483 amino acids, whereas AmyB has two alternative transcripts encoding polypeptides of 483 and 370 amino acids. The expression levels of both genes were high during larval stage and adulthood. The AmyB transcripts were absent in the pupal stage. A modification of the allozyme staining method allowed us to detect two clusters of bands on the electrophoretic gel that may correspond to the two α-amylase genes. There was a correlation between the lack of AmyB expression in pupa and the absence of the fast migrating isozyme cluster at this stage, suggesting that the faster migrating isoforms are products of the AmyB gene, whereas the slowly migrating bands are derived from the AmyA., (© 2011 Wiley Periodicals, Inc.)
- Published
- 2011
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7. Allozyme polymorphisms in horseshoe crabs, Carcinoscorpius rotundicauda, collected from polluted and unpolluted intertidal areas in Peninsular Malaysia.
- Author
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Yap CK, Chong CM, and Tan SG
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- Animals, Electrophoresis, Starch Gel, Horseshoe Crabs enzymology, Malaysia, Horseshoe Crabs genetics, Isoenzymes genetics, Polymorphism, Genetic, Water Pollution
- Abstract
It has been widely reported that allozyme frequency variation is a potential indicator of heavy metal-induced impacts in aquatic populations. In the present study, wild populations of horseshoe crab (Carcinoscorpius rotundicauda) were collected from contaminated and uncontaminated sites of Peninsular Malaysia. By adopting horizontal starch gel electrophoresis, seven enzyme systems were used to study allozyme polymorphisms. Nine polymorphic loci were observed in C. rotundicauda. The relationships of allozyme variations with the concentrations of Cd, Cu, Ni, and Zn in sediments and in muscle tissues of horseshoe crabs were determined. Based on genetic distance, the lower mean value of Nei's D (0.017) indicated that both of the contaminated populations of Kg. Pasir Puteh and Kuala Juru were very closely related when compared to the relatively uncontaminated Pantai Lido population. Higher heterozygosities were shown by the contaminated populations when compared to the uncontaminated population. Different allelic frequencies could be observed for the aldolase (ALD; E.C. 2.7.5.1) locus between the contaminated and uncontaminated populations of C. rotundicauda. The dendrogram of genetic relationships of the three populations of C. rotundicauda showed the same clustering pattern as the dendrograms are based on heavy metals in the sediments and in the horseshoe crabs' abdominal muscles. From the F statistics, the present study showed that the three populations of horseshoe crabs were considered to have undergone moderate genetic differentiation with a mean F (ST) value of 0.092 .The current results suggest that allozyme polymorphism in horseshoe crabs is a potential biomonitoring tool for metal contamination, although further validation is required.
- Published
- 2011
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8. Inter and intra subpopulation genetic variability of roe deer (Capreolus capreolus L.) assessed by I and II class genetic markers.
- Author
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Kamieniarz R, Wolc A, Lisowski M, Dabert M, Grajewski B, Steppa R, and Szwaczkowski T
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- Animals, Base Sequence, DNA Primers, Electrophoresis, Starch Gel, Female, Male, Microsatellite Repeats genetics, Deer genetics, Genetic Markers, Genetic Variation
- Abstract
The material was collected in three regions of Poland and consisted of 105 randomly chosen individuals killed during hunts (49 males, 56 females), out of which 51 were from Wielkopolska, 22 from Podkarpacie and 32 from Warmia. From each animal a blood sample was taken from the chest, stored in a probe with K2EDTA and frozen. The serum was used to establish the genotype for transferin and albumin whereas the samples with erythrocytes provided information on hemoglobin genotype. DNA was isolated from samples from each individual. Characteristics of eight (from among twelve studied) microsatellite loci and genetic distances were estimated by the use of standard computer package programs. Generally, monomorphism in blood proteins was registered. For the microsatellite loci the number of alleles ranged from 3 in the RT27-6-Fa locus (effectively two as the third allele was present only in two subpopulations with a very low frequency) to 10 in RT1-VI. Five loci showed heterozygosity of 0.5 or above which suggests their usefulness in parentage control. Considerable genetic distances (corresponding to geographical mileages) between the subpopulations were observed based on microsatellite markers.
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- 2011
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9. [Monomorphism of isoenzyme loci in natural and cultivated amaranth (Amaranthus L.) populations].
- Author
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Iudina RS, Zheleznov AV, and Shumnyĭ VK
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- Amaranthus growth & development, Electrophoresis, Starch Gel, Isoenzymes genetics, Amaranthus enzymology, Amaranthus genetics, Polymorphism, Genetic
- Abstract
Starch gel electrophoresis was used for isozyme analysis of ADH, GDH, MDH, IDH, and ME in populations of amaranth. Experiments were performed with 93 populations and 4 cultivars. Some populations proved to be polymorphic, and this fact allowed analysis of the genetic control of the enzymes listed. The populations examined showed poor allozyme variability. Monomorphism for all loci studied was observed in 73 populations and 4 varieties. Starch gel electrophoresis was used for isozyme analysis ofADH, GDH, MDH, IDH, and ME in populations of amaranth. Experiments were performed with 93 populations and 4 cultivars. Some populations proved to be polymorphic, and this fact allowed analysis of the genetic control of the enzymes listed. The populations examined showed poor allozyme variability. Monomorphism for all loci studied was observed in 73 populations and 4 varieties. Only some populations demonstrated rare polymorphism for a single locus each: Adh, Mdh 2, Gdh, Idh 1, Idh 2, or Mod 2. The results demonstrate genetic monomorphism of amaranth for the studied loci.
- Published
- 2010
10. Genetic and morphometric evidence for the conspecific status of the bumble bees, Bombus melanopygus and Bombus edwardsii.
- Author
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Owen RE, Whidden TL, and Plowright RC
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- Alberta, Animals, Bees anatomy & histology, Bees genetics, Biometry, Electrophoresis, Starch Gel, Female, Gene Frequency, Male, Pacific States, Pigmentation genetics, Species Specificity, Bees classification, Isoenzymes genetics, Wings, Animal anatomy & histology
- Abstract
The taxonomic status of closely related bumble bee species is often unclear. The relationship between the two nominate taxa, Bombus melanopygus Nylander (Hymenoptera: Apidae) and Bombus edwardsii Cresson (Hymenoptera: Apidae), was investigated using genetic (enzyme electrophoretic) and morphometric analyses. The taxa differ in the color of the abdominal terga two and three, being ferruginous in B. melanopygus and black in B. edwardsii. B. edwardsii occurs throughout California, while B. melanopygus extends north through Oregon, to Alaska and Canada. They are sympatric only in southern Oregon and northern California. The taxonomic status of these taxa was questioned when Owen and Plowright (1980) reared colonies from queens collected in the area of sympatry, and discovered that pile coloration was due to a single, biallelic Mendelian gene, with the red (R) allele dominant to the black (r). Here it is shown that all the taxa, whether from California, Oregon, or Alberta, have the same electrophoretic profile and cannot be reliably distinguished by wing morphometrics. This strongly supports the conclusion that B. melanopygus and B. edwardsii are conspecific and should be synonymized under the name B. melanopygus. Hence, there is a gene frequency cline running from north to south, where the red allele is completely replaced by the black allele over a distance of about 600 km.
- Published
- 2010
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11. Different survival of chromium-exposed Oxya chinensis among allozyme genotypes.
- Author
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Li L, Lu F, Zhang M, Guo Y, and Ma E
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- Animals, Electrophoresis, Starch Gel, Genotype, Chromium toxicity, Grasshoppers drug effects
- Abstract
The goal of the present study was to compare the different survival of Oxya chinensis exposed to chromium(VI) among allozyme genotypes to gain a better understanding of the relationship between the genetic variations and environmental disturbance. This study analyzed the occurrence of genotypes in O. chinensis population exposed to Cr(VI). O. chinensis samples were collected at Yuanping, Shanxi Province, China and used in acute toxicity tests. Specimens were assigned to Cr(VI) exposure (LD50: 291.0 mg/kg) for 24 h. The genetic composition of both dead and survived specimens was analyzed with horizontal starch gel electrophoresis in four enzymes (GPI, PGM, LDH, and ME). The results indicated that under Cr(VI) exposure, specimens with different genotypes had various mortalities at the four loci in laboratory conditions, and there was a genetic basis for tolerance in O. chinensis during acute exposure to Cr(VI).
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- 2009
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12. ADA genetic polymorphism and the effect of smoking on neonatal bilirubinemia and developmental parameters.
- Author
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Gloria-Bottini F, Magrini A, Cozzoli E, Bergamaschi A, and Bottini E
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- Adenosine Deaminase metabolism, Alleles, Birth Weight, Electrophoresis, Starch Gel, Female, Genetic Variation, Gestational Age, Humans, Hyperbilirubinemia, Neonatal blood, Hyperbilirubinemia, Neonatal enzymology, Hyperbilirubinemia, Neonatal genetics, Isoenzymes, Phenotype, Polymorphism, Genetic, Pregnancy, Prospective Studies, Adenosine Deaminase genetics, Bilirubin blood, Infant, Newborn blood, Smoking adverse effects
- Abstract
Background: Genetic variability of metabolic enzymes may influence the effect of cigarette smoking on intrauterine development and on early neonatal events., Aims: To investigate the role of adenosine deaminase genetic polymorphism on the effect of smoking on neonatal bilirubinemia and developmental parameters., Study Design: Analysis of association between adenosine deaminase phenotypes and neonatal developmental parameters. Prospective study of serum bilirubin level in relation to adenosine deaminase phenotype., Methods: We have studied 360 consecutive newborn infants from the Caucasian population of Rome. Serum bilirubin concentration was determined at birth and every 24 h for the first five days., Results: Overall maternal smoking is associated with a slight decrease in the incidence of phototherapy (13.4% in non smoking vs 11.7% in smoking mothers) and with a reduction of birth weight (3374 g in non smoking mothers vs 3133 g in smoking mothers). There is a significant interaction between smoke and adenosine deaminase. While in non smoking mothers the incidence of phototherapy in carriers of ADA 2 allele is higher than in ADA 1 phenotype, in infants from smoking mothers the pattern is reversed and the incidence of phototherapy in carriers of ADA 2 allele is lower than in infants with ADA 1 phenotype. Other neonatal bilirubin parameters follow a similar pattern of interaction between smoking and ADA. The negative effect of smoke on birth weight is much more evident in infant with ADA 1 phenotype than in those carrying the ADA 2 allele., Conclusions: The data suggest that ADA phenotype modifies the effect of smoking on developmental and bilirubin parameters.
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- 2008
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13. Population genetic structure and diversity of the Apennine endemic stream frog, Rana italica--insights on the Pleistocene evolutionary history of the Italian peninsular biota.
- Author
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Canestrelli D, Cimmaruta R, and Nascetti G
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- Animals, Bayes Theorem, Cluster Analysis, Cytochromes b genetics, DNA, Mitochondrial genetics, Electrophoresis, Starch Gel, Gene Frequency, Geography, Haplotypes, Isoenzymes genetics, Italy, Phylogeny, Polymerase Chain Reaction, Sequence Analysis, DNA, Evolution, Molecular, Genetic Variation, Genetics, Population, Ranidae genetics
- Abstract
For most species in the Western Palaearctic region, southern Mediterranean peninsulas have been identified as major Quaternary refugia and hotspots of intraspecific diversity, and thus, as areas of particular relevance for the conservation of the evolutionary potential. We analysed the patterns of geographical variation among 26 populations of the Italian stream frog, using both nuclear (allozymes) and mitochondrial (partial cytochrome b sequences) markers. Phylogenetic, phylogeographical and population genetic analyses suggested that the species survived the last glacial-interglacial cycles in two distinct refugia, one restricted to the tip of the Calabrian peninsula, at the extreme south of the species' range, the other spanning from central Calabria to central Apennines and showing evidences for further population subdivision therein. Historical demographic tests suggested a significant population expansion from the latter, which most likely began around the last pleniglacial. This expansion would have led to the rapid colonization of the northern Apennines to the north, and to a secondary contact and population admixture with the population from the southern refugium in southern central Calabria. A comparison of the evolutionary history inferred for the Italian stream frog with the data emerging for other codistributed species suggests: (i) the generality of a multiple-refugia scenario for the Italian peninsula, (ii) the possible occurrence of at least one suture zone in southern Italy, and (iii) that for most species, this Pleistocene refugium is not only a hotspot, but also a melting pot of intraspecific genetic diversity. Finally, the conservation implications of these results are also briefly highlighted.
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- 2008
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14. Geographical structuring of genetic diversity across the whole distribution range of Narcissus longispathus, a habitat-specialist, Mediterranean narrow endemic.
- Author
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Medrano M and Herrera CM
- Subjects
- Ecosystem, Electrophoresis, Starch Gel, Geography, Polymorphism, Genetic, Regression Analysis, Spain, Gene Flow, Genetic Drift, Genetic Variation, Narcissus genetics
- Abstract
Background and Aims: High mountain ranges of the Mediterranean Basin harbour a large number of narrowly endemic plants. In this study an investigation is made of the levels and partitioning of genetic diversity in Narcissus longispathus, a narrow endemic of south-eastern Spanish mountains characterized by a naturally fragmented distribution due to extreme specialization on a rare habitat type. By using dense sampling of populations across the species' whole geographical range, genetic structuring at different geographical scales is also examined., Methods: Using horizontal starch-gel electrophoresis, allozyme variability was screened at 19 loci for a total of 858 individuals from 27 populations. The data were analysed by means of standard statistical approaches in order to estimate gene diversity and the genetic structure of the populations., Key Results: Narcissus longispathus displayed high levels of genetic diversity and extensive diversification among populations. At the species level, the percentage of polymorphic loci was 68 %, with average values of 2.1, 0.11 and 0.14 for the number of alleles per locus, observed heterozygosity and expected heterozygosity, respectively. Southern and more isolated populations tended to have less genetic variability than northern and less-isolated populations. A strong spatial patterning of genetic diversity was found at the various spatial scales. Gene flow/drift equilibrium occurred over distances <4 km. Beyond that distance divergence was relatively more influenced by drift. The populations studied seem to derive from three panmictic units or 'gene pools', with levels of admixture being greatest in the central and south-eastern portions of the species' range., Conclusions: In addition to documenting a case of high genetic diversity in a narrow endemic plant with naturally fragmented populations, the results emphasize the need for dense population sampling and examination of different geographical scales for understanding population genetic structure in habitat specialists restricted to ecological islands.
- Published
- 2008
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15. Genetic structure and gene flow of Anopheles minimus and Anopheles harrisoni in Kanchanaburi Province, Thailand.
- Author
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Poolprasert P, Manguin S, Bangs MJ, Sukhontabhirom S, Poolsomboon S, Akaratanakul P, and Chareonviriyaphap T
- Subjects
- Animals, Anopheles classification, Anopheles growth & development, Electrophoresis, Starch Gel, Geography, Polymorphism, Genetic, Thailand, Anopheles genetics, Gene Flow
- Abstract
Isozyme frequencies were compared in seven field collections of Anopheles minimus complex using starch gel electrophoresis. Mosquito collections were sampled from four districts in Kanchanaburi Province where malaria is endemic. From eight enzyme systems, nine loci and seven polymorphisms were detected, indicating limited genetic differentiation among the seven collections (F(ST) = 0.061). The highest percent polymorphic loci were observed in Bong Ti Noi (BTN) Village (55.6%), whereas the least percent polymorphism was seen in Tha Kradan (TK) Village (22.2%). Comparing villages Pra Jedee (PJ) with Pu Teuy C (PTC) and Huai Khayeng (HK) with Pra Jedee (PJ), gene flow among collections varied from 3.72 to 62.25 reproductive migrants per generation. Among the seven collections, no correlation was seen between genetic and geographical distances (P > 0.05). Anopheles minimus (former species A) and Anopheles harrisoni (former species C) from Pu Teuy fit most closely in the same cluster, possibly indicating relatively recent divergence between taxa. The genetic and epidemiological ramifications of these findings are discussed.
- Published
- 2008
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16. Evidence of reinforcement of premating isolation between two species of the genus Ochthebius (Coleoptera: Hydraenidae).
- Author
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Urbanelli S and Porretta D
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- Animals, Electrophoresis, Starch Gel, Isoenzymes genetics, Italy, Species Specificity, Coleoptera genetics, Genetic Speciation, Genetics, Population, Sexual Behavior, Animal physiology
- Abstract
The increase in premating reproductive isolation between recently diverged and potentially interbreeding taxa resulting from selection against hybridization (reinforcement) is one of the most contentious issues in evolutionary biology. After many years of debate, its plausibility under various conditions has been shown by theoretical studies and some cases have been documented. At present, interest is arising about the frequency and importance of reinforcement in nature. Ochthebius quadricollis and Ochthebius sp. A are two hydraenid beetles inhabiting marine rock pools in the Mediterranean basin. By molecular analysis of a contact zone between the two species along the Italian Tyrrhenian coast, full reproductive isolation between the two species was evidenced. However, the finding of introgressed specimens at some diagnostic loci suggested that gene flow occurred in the past but then ceased. In this article, by analyzing species composition of mating couples collected in sympatric localities, we show the existence of strong assortative mating between the two species in nature. In laboratory multiple-choice mating trials, sympatric populations showed greater assortative mating than allopatric populations. Reinforcement is suggested as the most parsimonious hypothesis to explain the evolution of discriminative mate recognition systems occurring among O. quadricollis and Ochthebius sp. A under sympatric, but not allopatric, populations.
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- 2008
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17. Mating system variation in the hermaphroditic brooding coral, Seriatopora hystrix.
- Author
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Sherman CD
- Subjects
- Animals, Australia, Ecosystem, Electrophoresis, Starch Gel, Isoenzymes genetics, Pacific Ocean, Anthozoa physiology, Genetic Variation, Genetics, Population, Inbreeding, Sexual Behavior, Animal physiology
- Abstract
Self-compatible, hermaphroditic marine invertebrates have the potential to self-fertilize in the absence of mates or under sperm-limited conditions, and outcross when sperm is available from a variety of males. Hence, many hermaphroditic marine invertebrates may have evolved mixed-mating systems that involve facultative self-fertilization. Such mixed-mating strategies are well documented for plants but have rarely been investigated in animals. Here, I use allozyme markers to make estimates of selfing from population surveys of reef slope and reef flat sites, and contrast this with direct estimates of selfing from progeny-array analysis, for the brooding coral Seriatopora hystrix. Consistent heterozygote deficits previously reported for S. hystrix suggests that inbreeding (including the extreme of selfing) may be common in this species. I detected significant levels of inbreeding within populations (F(IS)=0.48) and small but significant differentiation among all sites (F(ST)=0.04). I detected no significant differentiation among habitats (F(HT)=0.009) though among site differentiation did occur within the reef slope habitat (F(SH)=0.06), but not within the reef flat habitat (F(SH)=0.015). My direct estimates of outcrossing for six colonies and their progeny from a single reef flat site revealed an intermediate value (t(m) (+/-s.d.)=0.53+/-0.20). Inbreeding coefficients calculated from progeny arrays (F(e)=0.31) were similar to indirect estimates based on adult genotype frequencies for that site (F(IS)=0.38). This study confirms that the mating system of this brooding coral is potentially variable, with both outcrossing and selfing.
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- 2008
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18. Hotspots of diversity in a clonal world--the Mediterranean moss Pleurochaete squarrosa in Central Europe.
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Grundmann M, Ansell SW, Russell SJ, Koch MA, and Vogel JC
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- Bryophyta enzymology, Bryophyta growth & development, DNA, Chloroplast chemistry, DNA, Chloroplast genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Electrophoresis, Starch Gel, Europe, Genetic Variation, Haplotypes genetics, Linkage Disequilibrium, Plant Shoots enzymology, Plant Shoots genetics, Polymerase Chain Reaction, Polymorphism, Genetic, Sequence Analysis, DNA, Bryophyta genetics
- Abstract
Diversity patterns of the dioecious haploid Mediterranean moss Pleurochaete squarrosa were analysed from Central and Northwest Europe using nuclear and chloroplast DNA sequencing and enzyme electrophoresis. Across 69 populations, 38 distinct haploid multilocus genotypes (MLGs) were detected, but nearly all populations were clonal. Only five MLGs occurred in more than two regions, and two diversity hotspots were detected. The Kaiserstuhl mountains in Southwest Germany harboured 34 MLGs, 25 being endemic within Central Europe. Levels of linkage disequilibrium and population structure in Kaiserstuhl populations were similar to levels and structure in sexually reproducing populations in the Mediterranean Basin. In the Moselle-Nahe area, some 250 km north, a comparably high allelic diversity, but no evidence of recombination, was detected. Genetic diversity measures were significantly lower than estimates obtained in the Mediterranean Basin and a G(ST) of 0.89 signified extreme population differentiation. Mantel tests identified a positive correlation on genetic and geographical distance for distances up to 50 km. Seven nrITS and three cpDNA haplotypes were detected, their geographical structure mirroring enzyme data set results. Comparative analysis with Mediterranean data demonstrated multiple recolonization of Central Europe from both the Iberian Peninsula and the Balkans. A suture zone of genotypes was detected along the border of Belgium/France and Germany. Despite P. squarrosa having haploid spore and/or vegetative propagules dispersal, we found patterns of postglacial recolonization of Central Europe comparable with those reported in flowering plants and animals. This study demonstrates the importance of comparative research on population genetics and phylogeography of a diverse range of organisms.
- Published
- 2008
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19. Development of a molecular assay specific for the Leishmania donovani complex that discriminates L. donovani/Leishmania infantum zymodemes: a useful tool for typing MON-1.
- Author
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Haralambous C, Antoniou M, Pratlong F, Dedet JP, and Soteriadou K
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- Animals, DNA, Protozoan chemistry, DNA, Protozoan genetics, Dogs, Electrophoresis, Starch Gel, Enzymes analysis, Genotype, Humans, Molecular Epidemiology economics, Molecular Sequence Data, Sequence Analysis, DNA, Leishmania donovani classification, Leishmania donovani genetics, Leishmania infantum genetics, Molecular Epidemiology methods, Polymerase Chain Reaction methods, Polymorphism, Restriction Fragment Length, Protozoan Proteins genetics
- Abstract
We have developed a simple, rapid, sensitive, and cost-effective typing method, based on the amplicon size of the K26 gene, capable of species/strain discrimination of Leishmania donovani complex strains causing visceral leishmaniasis (VL). It was evaluated on 112 strains and compared with multilocus enzyme electrophoresis (MLEE) typing. The K26 polymerase chain reaction (PCR) applied on 26 representative L. donovani complex strains gave 14 different amplicon sizes. The assay was specific to the L. donovani complex and discriminated L. infantum from L. donovani strains. MON-1 strains were also easily distinguished from other non-MON-1. Surprisingly, 29.3% of the Greek strains included in this study were MLEE typed as MON-98 and gave exclusively a 940-bp amplicon. The majority of Greek MON-1 strains gave also the 940-bp amplicon, whereas a 626-bp amplicon was consistently obtained with other European MON-1 strains. K26 PCR-restriction fragment length polymorphism, based on MON-1 K26 sequence polymorphism, gave 2 MON-1 subgroups. Application of the method may contribute to efficiently monitor VL.
- Published
- 2008
- Full Text
- View/download PDF
20. Characterization of Trypanosoma cruzi isolated from humans, vectors, and animal reservoirs following an outbreak of acute human Chagas disease in Santa Catarina State, Brazil.
- Author
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Steindel M, Kramer Pacheco L, Scholl D, Soares M, de Moraes MH, Eger I, Kosmann C, Sincero TC, Stoco PH, Murta SM, de Carvalho-Pinto CJ, and Grisard EC
- Subjects
- Animals, Brazil epidemiology, Disease Reservoirs parasitology, Disease Vectors, Electrophoresis, Starch Gel, Enzymes analysis, Genes, rRNA, Humans, Molecular Epidemiology, Opossums parasitology, Protozoan Proteins analysis, Triatoma parasitology, Trypanosoma cruzi enzymology, Trypanosoma cruzi genetics, Chagas Disease epidemiology, Chagas Disease parasitology, Disease Outbreaks, Trypanosoma cruzi classification, Trypanosoma cruzi isolation & purification
- Abstract
During March 2005, 24 cases of acute human Chagas disease were detected in Santa Catarina State, southern Brazil, all of them related to the ingestion of Trypanosoma cruzi-contaminated sugar cane juice. Following field studies allowed the isolation of 13 T. cruzi strains from humans, opossums (Didelphis aurita and Didelphis albiventris), and vectors (Triatoma tibiamaculata). The isolated strains were characterized by multilocus enzyme electrophoresis (MLEE) and analysis of the spliced-leader and 24Salpha rRNA genes. The assays revealed that all strains isolated from humans belong to the TcII group but revealed a TcII variant pattern for the phosphoglucomutase enzyme. Strains isolated from opossums also showed a TcI profile in all analysis, but strains isolated from triatomines revealed a mixed TcI/TcII profile by MLEE. No indication of the presence of Trypanosoma rangeli was observed in any assay. Considering that mixed strains (TcI/TcII) were isolated from triatomines in an area without active vectorial transmission to humans and that all strains isolated from humans belong to the TcII group, our results show that T. cruzi TcI and TcII groups are circulating among reservoirs and vectors in southern Brazil and indicate that selection toward TcII group in humans may occur after ingestion of a mixed (TcI/TcII) T. cruzi population.
- Published
- 2008
- Full Text
- View/download PDF
21. Genetic variability in three Amazon parrot species.
- Author
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Lopes IF, Del Lama MA, and Del Lama SN
- Subjects
- Animals, Brazil, Electrophoresis, Starch Gel, Gene Frequency, Parrots blood, Parrots classification, Isoenzymes analysis, Parrots genetics, Polymorphism, Genetic
- Abstract
Parrots of the genus Amazona are among the most threatened species of the Order Pscittaciformes. This work describes allozyme polymorphisms in three Amazon parrot species--the Blue-fronted Amazon (Amazona aestiva), the Orange-winged Amazon (Amazona amazonica), and the Festive Amazon (Amazona festiva) -, and provides useful data for the evaluation of their genetic variability. We electrophoretically analyzed blood samples from 68 wild-caught individuals, maintained in captivity in three Brazilian zoos. Eight of the ten studied enzyme loci exhibited polymorphism. Glucosephosphate isomerase (Gpi) proved to be a diagnostic locus for the identification of these Amazon species. The expected average heterozygosity of the Blue-fronted Amazon (0.060) differed significantly from the expected heterozygosities of the Orange-winged Amazon and the Festive Amazon (0.040 and 0.039, respectively). This result was discussed as a consequence of hybridization between two geographic A. aestiva subspecies, and alternatively as a particular trait of this species. Genetic variability of the Blue-fronted Amazon compared to birds in general is not low on a species-wide level, despite the fact that this parrot is one of the most illegally traded species. Allozyme analysis proved to be an useful tool in monitoring the genetic variation within the genus Amazona and can be applied in the management program of other threatened species of this genus.
- Published
- 2007
- Full Text
- View/download PDF
22. Distinct electrophoretic polymorphism pattern at alcohol dehydrogenase (Adh) locus of Drosophila melanogaster natural populations from Turkey.
- Author
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Ozsoy ED
- Subjects
- Animals, Electrophoresis, Starch Gel, Genetics, Population, Turkey, Alcohol Dehydrogenase genetics, Drosophila melanogaster genetics, Polymorphism, Genetic
- Abstract
Small number of Drosophila melanogaster populations from two distinct geographical regions, Central Anatolia and Black Sea, of Turkey were studied. Populations sampled were electrophoresed for a single locus, alcohol dehydrogenase (Adh) to assess population differentiation. Both the magnitude of genetic differentiation levels and the population structure based on hierarchical F-statistics allow populations to be grouped on two genetically divergent area, Central Anatolian and Black Sea. One ecological correlate, average yearly maximum rainfal. Ryear, seems to track this Adh genetic variation pattern. The study also shows that a typical pattern of geographical Adh polymorphism can emerge with a handfull of populations sampled across a relatively small distance.
- Published
- 2007
23. Allozyme variation in the camaenid tree snails Amphidromus atricallosus (Gould, 1843) and A. inversus (Müller, 1774).
- Author
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Prasankok P, Ota H, Toda M, and Panha S
- Subjects
- Animals, Electrophoresis, Starch Gel, Gene Frequency, Genotype, Malaysia, Phylogeny, Polymorphism, Genetic, Singapore, Snails classification, Snails enzymology, Species Specificity, Thailand, Genetic Variation, Isoenzymes genetics, Snails genetics
- Abstract
We examined allozyme variation in two camaenid tree snails, Amphidromus atricallosus and A. inversus, across two principal regions of Thailand and from Singapore, plus for A. inversus, one site in peninsular Malaysia. Using horizontal starch gel electrophoresis, 13 allozyme loci (11 polymorphic) were screened for A. atricallosus and 18 (5 polymorphic) for A. inversus. Heterozygosity was higher in A. atricallosus (Hexp=0.018-0.201, mean=0.085) than in A. inversus (Hexp=0-0.023, mean= 0.002). Genetic heterogeneity among samples was higher in A. inversus (Fst=0.965) than in A. atricallosus (Fst=0.781). Within A. atricallosus, populations were more differentiated in southern Thailand (Fst=0.551) than in eastern Thailand (Fst=0.144). The high Fst and low Hexp in populations of A. inversus suggest that this species is likely to have experienced a series of strong bottlenecks, perhaps occurring chiefly on offshore continental-shelf islands. The low Fst values of A. atricallosus in eastern Thailand suggest frequent gene flows among populations in this region. The southern and eastern samples of A. atricallosus exhibited fixed allele differences at four loci and great genetic distance (Nei's D=0.485-0.946), suggesting that these two samples may actually represent, or else be evolving into, separate species.
- Published
- 2007
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24. [Electrophoretic patterns of salivary hemeproteins (nitrophorines) of Rhodnius colombiensis and R. prolixus (Hemiptera, Reduviidae, Triatominae)].
- Author
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Arévalo A, Carranza JC, Guhl F, and Vallejo GA
- Subjects
- Animals, Hemeproteins genetics, Insect Proteins genetics, Polymorphism, Genetic, Rhodnius anatomy & histology, Rhodnius classification, Salivary Glands chemistry, Salivary Proteins and Peptides genetics, Electrophoresis, Starch Gel, Hemeproteins analysis, Insect Proteins analysis, Rhodnius chemistry, Salivary Proteins and Peptides analysis
- Abstract
Introduction: Salivary hemeprotein electrophoresis in starch gels is a recent technique used for differentiation of Rhodnius species with great phenotypic similarity. Furthermore, populations of the same species can be differentiated from geographically separated locales. Of the 15 described Rhodnius species in Latin America, at least eight have been reported in Colombia., Objective: To use the salivary hemeproteins electrophoresis for R. prolixus and R. colombiensis identification. These two species are phenotypically similar and have overlapping domestic and sylvatic cycles where they occur in the upper basin of the Magdalena river, Central Colombia., Material and Methods: The content of salivary glands of each insect was subjected to starch gel electrophoresis using glycine buffer, and the bands were revealed with 3,3',5,5'-tetramethylbenzidine. Band patterns were photographically recorded., Results: Electrophoretic patterns of salivary hemeproteins of R. prolixus and R. colombiensis were able to unequivocally differentiate the two species., Conclusion: The usefulness of the starch gel technique for distinguishing between R. prolixus and R. colombiensis was demonstrated as an additional tool to the morphometric and molecular methods already in use for differentiation of these two species.
- Published
- 2007
25. First report of genetic hybrids between two very divergent Leishmania species: Leishmania infantum and Leishmania major.
- Author
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Ravel C, Cortes S, Pratlong F, Morio F, Dedet JP, and Campino L
- Subjects
- AIDS-Related Opportunistic Infections parasitology, Adult, Animals, Base Sequence, DNA, Protozoan genetics, Electrophoresis, Starch Gel, Female, Humans, Isoenzymes, Leishmania infantum classification, Leishmania infantum enzymology, Leishmania major classification, Leishmania major enzymology, Molecular Sequence Data, Sequence Analysis, DNA methods, Hybridization, Genetic, Leishmania infantum genetics, Leishmania major genetics, Leishmaniasis, Visceral parasitology
- Abstract
The genus Leishmania includes many pathogenic species which are genetically very distant. The possibility of genetic exchange between different strains is still an important and debated question. Very few genetic hybrids (i.e., offspring of genetically dissimilar species) have been described in Leishmania. In this study, we report the first example of genetic hybrids occurring between two divergent Leishmania species, Leishmania infantum and Leishmania major. These two species have distinct geographical distributions and are transmitted by different vector species to different mammalian reservoir hosts. These hybrid strains were isolated in Portugal from immunocompromised patients and characterized by molecular and isoenzymatic techniques. These approaches showed that these chimeric strains probably contained the complete genome of both L. major and L. infantum. We believe this is the first report of genetic hybrids between such phylogenetically and epidemiologically distant species of Leishmania. This raises questions about the frequency of such cross-species genetic exchange in natural conditions, modalities of hybrid transmission, their long term maintenance as well as the consequences of these transfers on phenotypes such as drug resistance or pathogenicity.
- Published
- 2006
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26. Incomplete cryptic speciation between intertidal and subtidal morphs of Acrocnida brachiata (Echinodermata: Ophiuroidea) in the Northeast Atlantic.
- Author
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Muths D, Davoult D, Gentil F, and Jollivet D
- Subjects
- Animals, Atlantic Ocean, Base Sequence, DNA, Mitochondrial chemistry, DNA, Mitochondrial genetics, Echinodermata enzymology, Electron Transport Complex IV chemistry, Electron Transport Complex IV genetics, Electrophoresis, Starch Gel, Europe, Genetic Variation, Glucose-6-Phosphate Isomerase genetics, Hexokinase genetics, Isoenzymes, Malate Dehydrogenase genetics, Mannose-6-Phosphate Isomerase genetics, Molecular Sequence Data, Phosphoglucomutase genetics, Phylogeny, Polymerase Chain Reaction, Sequence Analysis, DNA, Echinodermata genetics, Ecosystem, Evolution, Molecular
- Abstract
The brittle-star Acrocnida brachiata (Montagu) lives in sandy-bottom habitat of both intertidal and subtidal zones along the coasts of the northwestern Europe. An allozyme frequency-based survey (five enzyme loci) was combined with a mitochondrial (mt) COI haplotype analysis (598-bp sequences) on 17 populations to trace back past colonization pathways from the actual population structure of the species. Both genetic markers display a sharp genetic break between intertidal (clade I) and subtidal populations (clade S). This break corresponds to an allele frequency inversion at three enzyme loci (Hk, Pgm and Pgi) and a deep divergence of about 20% in mtCOI sequences between most of the intertidal populations and other samples. The geographic distribution of clade I seems to be more restricted than clade S as it is absent from the intertidal of the eastern English Channel and North Sea and may be replaced by clade S in south Brittany. Applying previously published rates of mutation, divergence between the two clades is estimated to pre-date 5 million years ago and may be due to allopatric speciation processes at the Mio-Pliocene transition. The occurrence of putative hybrids in a few localities, however, suggests incomplete cryptic speciation with secondary contact zones. The relative importance of colonization history vs. habitat specialization are discussed in the light of neutral evolution as tested from mtCOI gene sequences. While differential selection seems to have contributed little to the separation of the lineages, it may have played a role in the emergence of adaptive polymorphisms in the hybrid zone. Furthermore, congruent spatial patterns of differentiation were observed in both clades suggesting a recent increase in population size. These findings are in agreement with a recent expansion of the populations during or after the formation of the English Channel, from a southern refuge for the subtidal clade whereas the intertidal clade may have persisted further north. As previously suspected for a species with a very short pelagic larval phase, contemporary gene flow between distant or adjacent populations appears to be extremely reduced or even absent.
- Published
- 2006
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27. Trypanosoma cruzi: infectivity modulation of a clone after passages through different hosts.
- Author
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Pérez Brandán C, Padilla AM, Diosque P, and Basombrío MA
- Subjects
- Animals, Cloning, Organism, Electrophoresis, Starch Gel, Genetic Variation, Guinea Pigs, Host-Parasite Interactions, Isoenzymes analysis, Isoenzymes genetics, Male, Mice, Parasitemia parasitology, Phylogeny, Random Amplified Polymorphic DNA Technique, Serial Passage, Species Specificity, Trypanosoma cruzi enzymology, Trypanosoma cruzi genetics, Virulence, Chagas Disease parasitology, Trypanosoma cruzi pathogenicity
- Abstract
Although Trypanosoma cruzi virulence can be modified through passages in vivo or long-term in vitro culture, the mechanisms involved are poorly understood. Here we report modifications in the infectivity of a T. cruzi clone after passages in different hosts without detectable changes in parasite genetic patterns. A clone was obtained from a T. cruzi IIe isolate and showed to be less virulent than the original isolate (p<0.05). This clone was enzymatically similar to the original isolate as shown by multilocus enzyme electrophoresis. Infection of this clone was compared by successive passages in mice and guinea pigs. The mouse-passaged subline became more virulent for both host species compared to the guinea pig-passaged subline (p<0.05). The clone line displayed similar random amplified polymorphic DNA patterns before and after passages in different hosts suggesting that alterations in virulence could be a result of a differential expression of virulence factors.
- Published
- 2006
- Full Text
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28. Multilocus enzyme electrophoresis supports speciation within the Anopheles nili group of malaria vectors in Cameroon.
- Author
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Awono-Ambene HP, Simard F, Antonio-Nkondjio C, Cohuet A, Kengne P, and Fontenille D
- Subjects
- Alleles, Animals, Anopheles enzymology, Anopheles genetics, Cameroon, DNA, Ribosomal chemistry, Electrophoresis, Starch Gel, Female, Gene Frequency, Humans, Insect Vectors enzymology, Insect Vectors genetics, Isoenzymes analysis, Isoenzymes genetics, Polymorphism, Genetic, Species Specificity, Anopheles classification, Genetic Variation, Insect Vectors classification, Malaria transmission
- Abstract
Multilocus enzyme analysis of the genetic variability and population structure was conducted among three malaria vector species of the Anopheles nili group in Cameroon: An. nili, An. carnevalei, and the recently described An. ovengensis. We detected species-specific alleles and large differences in shared allele frequencies at six of nine loci (e.g., PGM, GOT1, IDH1, IDH2, PGI, and alpha-GPD). This non-random distribution of alleles leads to high and significant values of differentiation indexes (0.569 < Fst < 0.874, P < 10(-4)). These results fully agree with standard morphologic descriptions, and therefore provide further support for recent taxonomic classification within the An. nili group.
- Published
- 2006
29. The effect of liquorice extract-containing starch gel on the amount and microbial composition of plaque.
- Author
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Söderling E, Karjalainen S, Lille M, Maukonen J, Saarela M, and Autio K
- Subjects
- Acids analysis, Adult, Cross-Over Studies, Dental Plaque microbiology, Dental Plaque Index, Double-Blind Method, Electrophoresis, Starch Gel, Female, Gels, Glycyrrhetinic Acid pharmacology, Humans, Male, Middle Aged, Saliva microbiology, Starch pharmacology, Anti-Bacterial Agents pharmacology, Dental Plaque drug therapy, Glycyrrhetinic Acid analogs & derivatives, Plant Extracts pharmacology, Silicic Acid pharmacology, Streptococcus mutans drug effects
- Abstract
The aim of this study was to find out whether liquorice-containing starch gel could affect plaque accumulation and its microbial composition. Sixteen healthy volunteers (mean age: 30.4+/-6.9 years) used 6 g of either control [8% acid-hydrolyzed corn starch, 25% maltitol syrup, water (w/w)] or liquorice gel (control + 2.5% liquorice extract), three times a day for 2 weeks. The gels were used in a random order with a 2-week washout period in between. At the end of each fortnight, plaque was allowed to accumulate for 2 days and all available plaque from the right side of the mouth was collected, weighed, and transferred to transport medium. The plaque on the left side was dyed and photographed in a standardized manner. Mutans streptococci, total streptococci, and facultative bacteria were assessed from the plaque using plate culturing. Plaque index (0-5) of incisors and canines on the left side was evaluated from the photographs. The clinical study was preceded by an in vivo acid production test. The acid production from gels containing 2.5-10% liquorice extract was monitored with a microelectrode. The in vivo acid production potential of the maltitol-containing starch gel was about 50% compared to the sucrose control. Liquorice inhibited acid production from the gel. In the clinical study, the weight of plaque after consumption of the liquorice gel did not differ from that of the control gel. No differences were found in the microbial counts nor in the plaque index between the two gels. In addition, the liquorice gel had no effect on the stability of the predominant bacterial populations of the plaque samples of 16 individuals as detected by PCR-denaturing gradient gel electrophoresis. In conclusion, an addition of liquorice extract to starch-containing gel with a low acid production potential had no effect on the plaque formed during a 2-week gel consumption period.
- Published
- 2006
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30. Cascading host-associated genetic differentiation in parasitoids of phytophagous insects.
- Author
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Stireman JO, Nason JD, Heard SB, and Seehawer JM
- Subjects
- Animals, DNA, Mitochondrial chemistry, DNA, Mitochondrial genetics, Diptera parasitology, Electron Transport Complex IV chemistry, Electron Transport Complex IV genetics, Electrophoresis, Starch Gel, Genetic Variation, Host-Parasite Interactions, Lepidoptera parasitology, Phylogeny, Polymerase Chain Reaction, Sequence Analysis, DNA, Wasps enzymology, Diptera genetics, Lepidoptera genetics, Solidago parasitology, Wasps genetics
- Abstract
The extraordinary diversity of phytophagous insects may be attributable to their narrow specialization as parasites of plants, with selective tradeoffs associated with alternate host plants driving genetic divergence of host-associated forms via ecological speciation. Most phytophagous insects in turn are attacked by parasitoid insects, which are similarly specialized and may also undergo host-associated differentiation (HAD). A particularly interesting possibility is that HAD by phytophagous insects might lead to HAD in parasitoids, as parasitoids evolve divergent lineages on the new host plant-specific lineages of their phytophagous hosts. We call this process 'cascading host-associated differentiation' (cascading HAD). We tested for cascading HAD in parasitoids of two phytophagous insects, each of which consists of genetically distinct host-associated lineages on the same pair of goldenrods (Solidago). Each parasitoid exhibited significant host-associated genetic divergence, and the distribution and patterns of divergence are consistent with divergence in sympatry. Although evidence for cascading HAD is currently limited, our results suggest that it could play an important role in the diversification of parasitoids attacking phytophagous insects. The existence of cryptic host-associated lineages also suggests that the diversity of parasitoids may be vastly underestimated.
- Published
- 2006
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31. Genetic diversity within and among sinai populations of three Ballota species (Lamiaceae).
- Author
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Zaghloul MS, Hamrick JL, Moustafa AA, Kamel WM, and El-Ghareeb R
- Subjects
- Alleles, Ballota classification, Conservation of Natural Resources, Electrophoresis, Starch Gel, Geography, Species Specificity, Ballota genetics, Genetic Variation
- Abstract
Ballota undulata, Ballota kaiseri, and Ballota saxatilis are very rare (and endemic--B. kaiseri), threatened species growing in St. Catherine Protectorate, southern Sinai, Egypt. They are subjected to a number of threats that have caused populations to decline in both number and size. For the long-term survival of these species, an appropriate conservation strategy for the maintenance of their genetic variation should be developed. This study measures genetic diversity within and among populations of these Ballota species and determines the conservation implications of the results. The genetic analyses demonstrated that the three Ballota species maintain relatively high levels of genetic diversity (He = 0.195-0.317) and that most of the their genetic diversity was found within populations (GST = 0.045-0.099). Indirect estimates of historical gene flow for B. undulata and B. saxatilis were relatively high (Nm(W) = 5.25 and 3.37, respectively) but suggest that there is somewhat less gene movement among B. kaiseri populations (Nm(W) = 2.29). The levels of genetic diversity maintained within populations of the three Ballota species indicate that an appropriate sampling design for ex situ safeguarding should capture the majority of the genetic diversity found within these taxa.
- Published
- 2006
- Full Text
- View/download PDF
32. Patterns of hybridization and population genetic structure in the terrestrial orchids Liparis kumokiri and Liparis makinoana (Orchidaceae) in sympatric populations.
- Author
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Chung MY, Nason JD, and Chung MG
- Subjects
- Conservation of Natural Resources, Electrophoresis, Starch Gel, Gene Frequency, Isoenzymes genetics, Korea, Orchidaceae anatomy & histology, Species Specificity, Demography, Genetic Variation, Genetics, Population, Hybridization, Genetic, Orchidaceae genetics, Phenotype
- Abstract
We investigated the potential for gene flow and genetic assimilation via hybridization between common and rare species of the terrestrial orchid genus Liparis, focusing specifically on sympatric and allopatric populations of the common Liparis kumokiri and the rare Liparis makinoana. We utilized analyses of genetic diversity, morphology, and the spatial distributions of individuals and genotypes to quantify the dynamics of interspecific gene flow at within- and among-population scales. High levels of allozyme genetic diversity (HE) were found in populations of the rare L. makinoana (0.317), whereas the common L. kumokiri (N = 1744 from 14 populations) revealed a complete lack of variation. This contrast may reflect different breeding systems and associated rates of genetic drift (L. makinoana is self-incompatible, whereas L. kumokiri is self-compatible). At the two known sympatric sites, individuals were found that recombined parental phenotypes, possessing floral characteristics of L. kumokiri and vegetative characteristics of L. makinoana. These putative hybrids were the only individuals found segregating alleles diagnostic of both parental species. Analysis of these individuals indicated that hybrid genotypes were skewed towards L. kumokiri and later generation recombinants of L. kumokiri at both sympatric sites. Furthermore, Ripley's bivariate L(r) statistics revealed that at one site these hybrids are strongly spatially clustered with L. kumokiri. Nonetheless, the relatively low frequency of hybrids, absence of ongoing hybridization (no F1s or first generation backcrossess), and strong genetic differentiation between morphologically 'pure' parental populations at sympatric sites (FST = 0.708-0.816) indicates that hybridization was not an important bridge for gene flow. The results from these two species suggest that natural hybridization has not played an important role in the diversification of Liparis, but instead support the view that genetic drift and limited gene flow are primarily responsible for speciation in Liparis. Based on genetic data and current status of the species, implications of the research for conservation are considered to provide guidelines for appropriate conservation and management strategies.
- Published
- 2005
- Full Text
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33. Hematological parameters and red blood cell indices in healthy Thai children: a revision for 2005.
- Author
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Viprakasit V, Suwanthol L, Sangpraypan T, Glomglao W, Utto W, and Veerakul G
- Subjects
- Adolescent, Child, Child, Preschool, Electrophoresis, Starch Gel, Female, Humans, Infant, Leukocyte Count, Male, Reference Values, Thailand, Erythrocyte Indices physiology
- Abstract
In order to provide a reference range for hematological parameters and red blood cells indices in Thai children, we analyzed data from 395 healthy non-anemic Thai children age from 1-16 years old, who all had normal pattern of hemoglobin typing (Hb A and Hb A2 less than 3.5%). Hematological analysis was performed using an automated cell counter and the hemoglobin studies were carried out by electrophoresis and liquid chromatography. Owing to a high frequency of a thalassemia in Thailand, cases with MCV < 75 fL has been excluded from the study since these cases were likely to be heterozygotes for alpha0 thalassemia. These criterions were applied to select so-called 'normal' controls for our analysis. Relatively mild microcytosis and hypochromia were observed, in particular in the first three years of age, suggesting an intrinsic immature nature of erythropiesis in the children. Age-dependent differences in the reference values for white blood cell (WBC) count and differential and platelet count were observed. Herein the hematological data and red blood cell indices were summarized according to ages and these will be of clinically useful for the future reference.
- Published
- 2005
34. Variability and genetic differentiation among Anopheles (Ano.) intermedius Chagas, 1908 and Anopheles (Ano.) mattogrossensis Lutz & Neiva, 1911 (Diptera: Culicidae) from the Brazilian Amazon.
- Author
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dos Santos JM, Rodriguez GA, Maia Jde F, and Tadei WP
- Subjects
- Animals, Anopheles classification, Anopheles enzymology, Brazil, Electrophoresis, Starch Gel, Gene Expression Regulation, Enzymologic, Isoenzymes analysis, Isoenzymes genetics, Anopheles genetics, Genetic Variation
- Abstract
Anopheles (Anopheles) intermedius and Anopheles (Ano.) mattogrossensis are Brazilian anopheline species belonging to the scarcely studied Anopheles subgenus. Few studies have been done on the genetic differentiation of these species. Both species have been found infected by Plasmodium and are sympatric with other anopheline species from the Nyssorhynchus subgenus. Eighteen enzymatic loci were analyzed in larval specimens of An. intermedius and An. mattogrossensis aiming to estimate the variability and genetic differentiation between these species. An. mattogrossensis population showed higher genetic variability (P = 44.4 and Ho = 0.081 +/- 0.031) than that of An. intermedius (P = 33.3 and Ho = 0.048 +/- 0.021). Most analyzed loci showed genotypic frequencies according to Hardy-Weinberg equilibrium, except for LAP1 and LAP2 in An. intermedius, and EST1 and PGM loci in An. mattogrossensis. The genetic distance between these species (D = 0.683) was consistent with the inter-specific values reported for Anopheles subgenus. We verified that the polymorphism and heterozygosity percentile values found in both species and compared to those in the literature, showed no relation between the level of isozyme variability and geographical distribution. The low variability found in these two species is probably more related to the niche they occupy than to their geographic distribution.
- Published
- 2005
- Full Text
- View/download PDF
35. Phylogeny and taxonomy of the North American clade of the Ceratocystis fimbriata complex.
- Author
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Johnson JA, Harrington TC, and Engelbrecht CJ
- Subjects
- Ascomycota cytology, Ascomycota isolation & purification, Carya microbiology, DNA, Fungal chemistry, DNA, Fungal genetics, DNA, Ribosomal Spacer chemistry, DNA, Ribosomal Spacer genetics, Electrophoresis, Starch Gel, Enzymes chemistry, Enzymes isolation & purification, Fungal Proteins chemistry, Fungal Proteins isolation & purification, Molecular Sequence Data, North America, Photomicrography, Plant Diseases microbiology, Polymorphism, Genetic, Populus microbiology, Prunus microbiology, Quercus microbiology, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Ascomycota classification, Ascomycota genetics, Phylogeny
- Abstract
Ceratocystis fimbriata is a widely distributed, plant pathogenic fungus that causes wilts and cankers on many woody hosts. Earlier phylogenetic analyses of DNA sequences revealed three geographic clades within the C. fimbriata complex that are centered respectively in North America, Latin America and Asia. This study looked for cryptic species within the North American clade. The internal transcribed spacer regions (ITS) of the rDNA were sequenced, and phylogenetic analysis indicated that most isolates from the North American clade group into four host-associated lineages, referred to as the aspen, hickory, oak and cherry lineages, which were isolated primarily from wounds or diseased trees of Populus, Carya, Quercus and Prunus, respectively. A single isolate collected from P. serotina in Wisconsin had a unique ITS sequence. Allozyme electromorphs also were highly polymorphic within the North American clade, and the inferred phylogenies from these data were congruent with the ITS-rDNA analyses. In pairing experiments isolates from the aspen, hickory, oak and cherry lineages were interfertile only with other isolates from their respective lineages. Inoculation experiments with isolates of the four host-associated groupings showed strong host specialization by isolates from the aspen and hickory lineages on Populus tremuloides and Carya illinoensis, respectively, but isolates from the oak and cherry lineages did not consistently reveal host specialization. Morphological features distinguish isolates in the North American clade from those of the Latin American clade (including C. fimbriata sensu stricto). Based on the phylogenetic evidence, interfertility, host specialization and morphology, the oak and cherry lineages are recognized as the earlier described C. variospora, the poplar lineage as C. populicola sp. nov., and the hickory lineage as C. caryae sp. nov. A new species associated with the bark beetle Scolytus quadrispinosus on Carya is closely related to C. caryae and is described as C. smalleyi.
- Published
- 2005
- Full Text
- View/download PDF
36. Genetic structure and environmental heterogeneity in the European hake (Merluccius merluccius).
- Author
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Cimmaruta R, Bondanelli P, and Nascetti G
- Subjects
- Animals, Atlantic Ocean, Cluster Analysis, Electrophoresis, Starch Gel, Gene Frequency, Geography, Isoenzymes genetics, Mediterranean Sea, Seawater analysis, Sodium Chloride analysis, Temperature, Environment, Fishes genetics, Genetic Variation, Genetics, Population
- Abstract
This study aimed at assessing the genetic structure and the state of the stocks of the European hake (Merluccius merluccius). To this end, 15 samples were taken from the whole range of the species and analysed using allozymes. Since 11 samples were taken from the poorly studied Mediterranean Sea, the results obtained provided a complete picture of the hake's genetic structure and an initial insight into its relationships with environmental features. Atlantic and Mediterranean hake populations are separated by the Almeria-Oran front. This area has been proved to be the boundary between Atlantic and Mediterranean stocks of many marine organisms, but some doubt exists concerning the efficaciousness of the local gyres as barriers to the gene flow. Our data have evidenced a latitudinal cline at loci Gapdh and Gpi-2 within the Mediterranean Sea, with a further steep change across the Almeria-Oran front. The genetic pattern showed a strong correlation with the values of the salinity both at the surface and at -320 m and of the salinity + temperature at the surface, suggesting a role for these parameters in maintaining the genetic differentiation among the two population groups through selective processes. Finally, the levels of genetic variability were found to be slightly lower in the depleted Atlantic stock than in the Mediterranean one.
- Published
- 2005
- Full Text
- View/download PDF
37. Genetic variation and population structure of two species of neo-tropical mud-mussels (Mytella spp).
- Author
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Oliveira ME, Russo CA, Lazoski C, Vianna PR, and Solé-Cava AM
- Subjects
- Animals, Brazil, Electrophoresis, Starch Gel, Gene Frequency, Heterozygote, Mytilidae classification, Mytilidae enzymology, Species Specificity, Genetic Variation genetics, Mytilidae genetics
- Abstract
Mytella guyanensis Lamarck (1819) and Mytella charruana d'Orbigny (1846) are widespread euryhaline bivalves that have become commercially important in Brazil. Despite their importance, however, no genetic information that would be useful to orient governmental policies is available for these species. We analyzed, through allozyme electrophoresis, populations of M. guyanensis and M. charruana along 3,500 km of Brazilian coast. Pairwise comparisons among gene frequencies in M. guyanensis resulted in high levels of pairwise gene identity (I = 0.976 to 0.998). Conversely, significant levels of population structure were found in both M. guyanensis (FST = 0.089) and M. charruana (FST = 0.102). Heterozygosity levels for both species were high (H(e) = 0.090 to 0.134 in M. guyanensis and H(e) = 0.191 to 0.228 in M. charruana). The larger population size of M. charruana could explain, at least partially, the higher levels of genetic variability for this species. These levels of genetic variability yield an effective population size estimate of about 300,000 for M. guyanensis, and 540,000 for M. charruana, based on neutralist expectations. Remarkably, these numbers are much smaller than the estimated actual population sizes. This distortion might be explained by unstable population sizes and it suggests that long-term genetic variability studies are crucial to prevent artifactual viability analysis data for these commercially exploited species.
- Published
- 2005
38. Investigation of serum protein systems in Chinese pigs.
- Author
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Tao J, Hu WX, Msangi CI, Luo ZY, Tang LJ, Qin ZQ, Liu SP, and Tao Y
- Subjects
- Amylases blood, Amylases genetics, Animals, Ceruloplasmin genetics, China, Cluster Analysis, Electrophoresis, Starch Gel, Gene Frequency, Hemopexin genetics, Heterozygote, Prealbumin genetics, Species Specificity, Transferrin genetics, Blood Proteins genetics, Breeding methods, Polymorphism, Genetic, Sus scrofa genetics
- Abstract
Polymorphisms of transferrin (Tf), pre-albumin (Pa), haemopexin (Hpx), ceruloplasmin (Cp) and amylase (Am) of Duroc pigs and Hunan indigenous pigs were investigated using horizontal starch gel electrophoresis. Allele frequencies of Durocs determined in 2004 were compared with frequencies presented in the paper by Baker L.N. (1968) Serum protein variation in Duroc and Hampshire pigs. Vox Sanguinis15, 154-8. The number of serum protein alleles decreased over time and allele frequencies aggregated across certain alleles, including TfB, PaA, Hpx3, CpB and AmB. Differences in allele frequencies, average heterozygosities and standard genetic distances between the Duroc pigs and Hunan indigenous pig populations were examined. The relationship between Durocs and Hunan indigenous pigs was found to be more distant than those among the three Hunan indigenous pig populations.
- Published
- 2005
- Full Text
- View/download PDF
39. Evidence for a natural hybrid of peacock bass (Cichla monoculus vs Cichla temensis) based on esterase electrophoretic patterns.
- Author
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Teixeira AS and Oliveira Sda S
- Subjects
- Animals, Electrophoresis, Starch Gel, Esterases genetics, Cichlids genetics, Esterases analysis, Hybridization, Genetic genetics, Muscle, Skeletal enzymology
- Abstract
Esterase (Est) and esterase-D (Est-D) electrophoretic patterns identified by starch gel electrophoresis of skeletal muscle protein extracts of 184 specimens of three species of peacock bass, locally known as tucunares (Cichla monoculus, C. temensis and Cichla sp), plus four specimens of a supposed hybrid (C. monoculus vs C. temensis), collected from the Central Amazon, were examined to determine if they could aid in identifying a supposed hybrid between C. monoculus and C. temensis. Six zones of electrophoretic activity were found with these enzyme systems. The Est enzyme showed one zone of activity, formed by bands 1, 2 and 3, plus three zones of activity, presumably controlled by Est-1, 2 and 3 loci. The Est-D enzyme had two zones of activity, presumably controlled by Est-D1 and Est-D2 loci. Cichla monoculus and C. temensis shared band 2 and alleles Est-1(1), Est-2(1), Est-3(2), and Est-D1(1), and therefore these were useless for identifying hybrids between the two species. However, a probable hybrid pattern of bands 1, 2, and 3, presumably generated by a combination of pattern 12 from C. monoculus with pattern 23 from C. temensis, resulting from a possible cross between these two species, was detected. Although the Est-D2 locus cannot be considered an ideal diagnostic marker for identifying the supposed hybrid (C. monoculus vs C. temensis), as it is polymorphic, it proved to be useful for determining the origin of the hybrid, i.e., which parental species were involved in the hybridization process.
- Published
- 2005
40. Eco-epidemiological survey of Leishmania (Viannia) braziliensis American cutaneous and mucocutaneous leishmaniasis in Ribeira Valley River, Paraná State, Brazil.
- Author
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de Castro EA, Luz E, Telles FQ, Pandey A, Biseto A, Dinaiski M, Sbalqueiro I, and Soccol VT
- Subjects
- Animals, Brazil epidemiology, Dogs parasitology, Electrophoresis, Starch Gel, Female, Horses parasitology, Humans, Leishmania braziliensis enzymology, Leishmania braziliensis genetics, Leishmaniasis, Cutaneous diagnosis, Leishmaniasis, Cutaneous parasitology, Male, Psychodidae, Random Amplified Polymorphic DNA Technique, Rural Population, Seasons, Seroepidemiologic Studies, Skin Tests, Disease Reservoirs, Leishmania braziliensis isolation & purification, Leishmaniasis, Cutaneous epidemiology
- Abstract
Leishmaniasis is endemic since last century in Adrianópolis Municipality, Ribeira Valley and is a serious public health. A study carried out during 1993-2003 on epidemiological surveys conducted in rural communities showed 339 new cases of cutaneous leishmaniasis (CL) detected from four municipalities (Adrianópolis, Cerro Azul, Doutor Ulysses and Rio Branco do Sul). A larger prevalence of cutaneous lesions was observed in rural workers (36%), women with domestic activities (18%), and younger students (31%). Multiple lesions were noticed in 53% of patients, but only one case of mucocutaneous leishmaniasis was reported. Twenty stocks were isolated from patients with characteristics lesions and were identified as Leishmania (Viannia) braziliensis using multi-locus enzyme electrophoresis (MLEE) and Random Amplified DNA (RAPD). In Phlebotominae survey, five species were obtained. Lutzomyia intermedia sl. represented 97.5% in peridomiciliar area and 100% in domicile. A canine serological survey made (Indirect Immunofluorescence Antibody Test, IFAT and Enzyme Linked Immunosorbent Assay, ELISA) in six rural county of Adrianópolis Municipality during 1998-1999 showed that 15.1% (24/159) of dogs were sera reactive. No lesions were observed in dogs and no parasite was isolated from lymph node aspirates and biopsies. In wild reservoirs study, only seven animals (Cricetidae, Desmodus sp. and edentates) were captured, but no parasites were found in culture from deep organs. The paper presents results of our 10 years study on cutaneous leishmaniasis survey in the Ribeira River Valley, East Region of Paraná State, Brazil. Environment changes in this region are also discussed.
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- 2005
- Full Text
- View/download PDF
41. Mating system of wild Phaseolus lunatus L. and its relationship to population size.
- Author
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Zoro Bi I, Maquet A, and Baudoin JP
- Subjects
- Electrophoresis, Starch Gel, Gene Frequency, Isoenzymes, Models, Genetic, Phaseolus genetics, Reproduction physiology, Genetics, Population, Inbreeding, Phaseolus physiology, Population Density
- Abstract
Using isozyme variation in a naturally pollinated seed family for 10 wild Phaseolus lunatus L. (Lima bean) populations, ranging in sizes from 10 to 60 reproductive individuals, we estimated levels of outcrossing (t) and parental inbreeding coefficient (F). We also examined the relationship between outcrossing rate and population size. Average estimates of the single-locus outcrossing rate (ts) ranged from 0.024 to 0.246 (mean=0.091+/-0.065). Estimates of the multilocus outcrossing rate (tm) ranged from 0.027 to 0.268, and averaged 0.096+/-0.071. Inbreeding coefficients based on genotypic frequencies of maternal plants were positive and significantly greater than zero (F=0.504), suggesting an excess of homozygotes in all the populations studied. There was indirect evidence of nonrandom mating for outcrosses and this was mainly attributed to self-fertilisation since the averaged difference between tm and ts, which provides a measure of biparental inbreeding, represents only 1% of the autogamy rate. No significant correlation was observed between outcrossing rate and population size. Estimates of t showed significant heterogeneity among populations and factors explaining this tendency are suggested.
- Published
- 2005
- Full Text
- View/download PDF
42. Population genetic differentiation in taxa of Lotus (Fabaceae: Loteae) endemic to the Gran Canarian pine forest.
- Author
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Oliva-Tejera F, Caujapé-Castells J, Naranjo-Suárez J, Navarro-Déniz J, Acebes-Ginovés JR, and Bramwell D
- Subjects
- Atlantic Islands, Cluster Analysis, Electrophoresis, Starch Gel, Gene Frequency, Geography, Isoenzymes, Lotus classification, Population Density, Species Specificity, Genetic Variation, Genetics, Population, Lotus genetics, Phylogeny
- Abstract
A survey of allozyme variation at 17 loci in 14 populations representing four taxonomically problematic Gran Canarian pine forest endemic taxa of Lotus (L. genistoides, L. holosericeus, L. spartioides and some taxonomically uncertain populations collected under the designation Lotus sp.) was conducted to examine their diversification and systematic relationships. All groups exhibited high values of genetic variation, although inbreeding was common within populations. Considerable among-population genetic homogeneity was detected, as inferred from low values of Gst within each of the groups. The high population sizes of these taxa and a lack of evidence for isolation by distance or genetic bottlenecks indicate that diversity has accumulated over a long period of environmental stability. The association of high genetic distances with low linear distances, and the substantial increase in the values of Gst when the taxa considered were merged in different combinations hint at an incipient (yet probably taxonomically insufficient) reproductive isolation. The genetic similarity between L. genistoides, L. holosericeus and L. spartioides, together with the different behaviour of the populations collected under the designation Lotus sp., may have important implications for the restructuring of the taxonomy of this group when the ongoing morphological studies are completed.
- Published
- 2005
- Full Text
- View/download PDF
43. Isoenzyme variation in Melipona rufiventris (Hymenoptera: Apidae, Meliponina) in Minas Gerais State, Brazil.
- Author
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Costa RG, Tavares MG, Dias LA, and Campos LA
- Subjects
- Animals, Brazil, Electrophoresis, Starch Gel, Gene Frequency, Genetic Variation, Geography, Heterozygote, Inbreeding, Male, Bees enzymology, Bees genetics, Isoenzymes genetics
- Abstract
The stingless bee Melipona rufiventris is an important pollinator in several Brazilian ecosystems. Originally widely distributed in Minas Gerais (MG) state, this species is becoming very rare. Therefore this species was included in the endangered species list of MG. We used isoenzyme data for a better understanding of the genetic structure of several M. rufiventris colonies. Samples of 35 colonies were collected from 12 localities and evaluated by nine enzymatic systems, which yielded 17 loci. M. rufiventris genetic variation was found to be low, typical of an endangered species. The proportion of polymorphic loci was 5.88% in both ecosystems. Only Est-4 was polymorphic in colonies from the Forest and Mdh-1 in colonies from the Cerrado. The expected heterozygosity ranged from 0.0068 in the Cerrado to 0.0078 in the Forest. Despite this, enzyme electrophoretic analyses provided a good idea of the diversity between samples from Cerrado and Forest which reinforce the existence of two different "forms" of M. rufiventris in MG, one present in the Cerrado and the other in Forest. This information is of great importance for the conservation of M. rufiventris in MG.
- Published
- 2005
- Full Text
- View/download PDF
44. Salvage of genetically valuable tissues following a freezer failure.
- Author
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Hanner R, Corthals A, and Dessauer HC
- Subjects
- Animals, Cryopreservation, Electrophoresis, Starch Gel, Female, Lizards metabolism, Temperature, Nucleic Acids metabolism, Proteins metabolism
- Published
- 2005
- Full Text
- View/download PDF
45. Determine alpha-1 antitrypsin level and phenotype in patients with neutrophilic panniculitis.
- Author
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Walling H and Geraminejad P
- Subjects
- Electrophoresis, Starch Gel, Humans, Isoenzymes genetics, Neutrophils pathology, Panniculitis etiology, Panniculitis pathology, Phenotype, alpha 1-Antitrypsin genetics, alpha 1-Antitrypsin Deficiency complications, alpha 1-Antitrypsin Deficiency enzymology, Isoenzymes analysis, Panniculitis enzymology, alpha 1-Antitrypsin analysis, alpha 1-Antitrypsin Deficiency diagnosis
- Published
- 2005
- Full Text
- View/download PDF
46. Sex-biased predation by polecats influences the mating system of frogs.
- Author
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Lodé T, Holveck MJ, Lesbarrères D, and Pagano A
- Subjects
- Animals, Conflict, Psychological, Electrophoresis, Starch Gel, Female, Ferrets genetics, France, Isoenzymes, Male, Telemetry, Ferrets physiology, Predatory Behavior physiology, Ranidae physiology, Sex Ratio, Sexual Behavior, Animal physiology
- Abstract
In agile frogs, Rana dalmatina, an increase in male-biased operational sex ratio and in male abundance results in the emergence of alternative male mating behaviour in the form of searching. As a consequence, females are coerced into mating with multiple males, which in turn increases the level of conflict between the sexes. Selective predation on males by the European polecat, Mustela putorius, decreases the occurrence of polyandry. In ponds visited by polecats, the sex ratio is less male biased than in ponds where polecats are absent. As a result most males call to attract females and fewer males actively search for females. Females are able to choose between calling males and mate with a single male. Thus, predation by polecats is found to influence sex ratio, male abundance and sexual conflict in a frog mating system, restricting the opportunity for multiple mating.
- Published
- 2004
- Full Text
- View/download PDF
47. Thermal selection of PGM allozymes in newly founded populations of the thermotolerant vent polychaete Alvinella pompejana.
- Author
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Piccino P, Viard F, Sarradin PM, Le Bris N, Le Guen D, and Jollivet D
- Subjects
- Animals, Electrophoresis, Starch Gel, Gene Frequency, Genetics, Population, Genotype, Geography, Isoenzymes, Kinetics, Models, Biological, Pacific Ocean, Species Specificity, Biological Evolution, Hot Temperature, Phosphoglucomutase metabolism, Polychaeta enzymology, Selection, Genetic
- Abstract
Alvinella pompejana lives on the top of chimneys at deep-sea hydrothermal vents of the East Pacific Rise. It is thought to be one of the most thermotolerant and eurythermal metazoans. Our experimental approach combines methods of population genetics and biochemistry, considering temperature as a potential selective factor. Phosphoglucomutase (Pgm-1 locus) is one of the most polymorphic loci of A. pompejana and exhibits four alleles, from which alleles 90 and 100 dominate with frequencies of approximately 0.5 in populations. Results from previous studies suggested that allele 90 might be more thermostable than allele 100. Significant genetic differentiation was found by comparing contrasted microhabitats, especially the young, still hot, versus older and colder chimneys, with allele 90 being at highest frequency on young chimneys. Moreover the frequency of allele 90 was positively correlated with mean temperature at the opening of Alvinella tubes. In parallel, thermostability and thermal optimum experiments demonstrated that allele 90 is more thermostable and more active at higher temperatures than allele 100. This dataset supports an additive model of diversifying selection in which allele 90 is favoured on young hot chimneys but counterbalanced over the whole metapopulation by the dynamics of the vent ecosystem.
- Published
- 2004
- Full Text
- View/download PDF
48. Genetic linkage mapping of allozyme loci in even- and odd-year pink salmon (Oncorhynchus gorbuscha).
- Author
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Matsuoka MP, Gharrett AJ, Wilmot RL, and Smoker WW
- Subjects
- Alaska, Animals, Crosses, Genetic, Electrophoresis, Starch Gel, Female, Histocytochemistry, Isoenzymes, Male, Sex Factors, Species Specificity, Chromosome Mapping, Genetic Variation, Recombination, Genetic genetics, Salmon genetics
- Abstract
We constructed genetic linkage maps of allozyme loci in even- and odd-year pink salmon (Oncorhynchus gorbuscha), using the total of 320 families (each female was crossed with two different males, and 80 females and 160 males were used for each of even year and odd year). The maps include eight linkage groups involving 22 loci. We observed substantial variation in recombination frequencies among different families within broodline and between sexes within broodlines. In the linkage analysis between sAAT-3* and sMDH-B1,2*, two even-year families and one odd-year family exhibited evidence of association, but two even-year and one odd-year families did not. Recombination rate tends to be reduced in males in pink salmon. The ratio of recombination rate (female/male), which ranged from 1.7 to infinity, averaged 2.8 in the even-year crosses and 3.2 in the odd-year crosses. The linkage groups (LG) I and II involving sAAT and mAH loci, which probably duplicated in the recent tetraploidization event, and the orders of loci in the LGs I (sAAT-3* --> mAH-4*) and II (mAH-3* --> sAAT-4*) were reversed, suggesting the possible paracentric inversion during salmonid evolution after the duplication.
- Published
- 2004
- Full Text
- View/download PDF
49. Genetic variability of natural populations of trematodes of the genus Lecithochirium parasites of eels.
- Author
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Vilas R, Sanmartín ML, and Paniagua E
- Subjects
- Alleles, Anguilla, Animals, Electrophoresis, Starch Gel, Fish Diseases parasitology, France, Genetic Variation, Genotype, Phylogeny, Polymorphism, Genetic, Seawater parasitology, Spain, Stomach parasitology, Trematoda enzymology, Trematode Infections parasitology, Trematoda genetics
- Abstract
Allozyme variation within and among populations of 3 species of the genus Lecithochirium (Trematoda: Hemiuridae) was studied by starch gel electrophoresis. In total, 19 loci were analysed in 7 populations. The level of genetic variability was relatively high in all populations. The percentage of polymorphic loci (0.95 criterion) observed per population varied from 21.0% to 55.5%, and expected heterozygosity levels varied from 0.082 to 0.197. All populations showed significant heterozygote deficiencies. In Lecithochirium fusiforme most of the deviations from Hardy-Weinberg proportions were within the populations and this species showed moderate population structuring (F(IS)=0.486, F(ST)=0.142, Nm= 1.51) and accordingly low intraspecific genetic distances (D=0.003 to 0.027). A significant lack of heterozygotes for several polymorphic loci was revealed in Lecithochirium rufoviride and Lecithochirium musculus. The most probable cause of the population genetic subdivision in L. rufoviride is the presence of at least 1 cryptic species in the populations studied. Although the lowest percentage of fixed genetic differences was that between L. fusiforme and L. musculus, two different algorithms for the construction of evolutionary trees on a matrix of genetic distances confirmed that L. fusiforme and L. rufoviride are phenetically the most closely related species.
- Published
- 2004
- Full Text
- View/download PDF
50. Heritabilities and additive genetic variances of the activities of some enzymes in Drosophila melanogaster populations living in different habitats.
- Author
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Pecsenye K, Komlósi I, and Saura A
- Subjects
- Analysis of Variance, Animals, Crosses, Genetic, Electrophoresis, Starch Gel, Oxidoreductases metabolism, Sweden, Drosophila melanogaster enzymology, Drosophila melanogaster genetics, Environment, Genetics, Population, Oxidoreductases genetics
- Abstract
Drosophila melanogaster samples were collected from a large population in two habitats: farmyards and distilleries. Samples were taken from two villages in each habitat. Three isofemale lines were established from all four samples and full-sib crosses were set in each isofemale line. Activities of four enzymes (ADH, alpha GPDH, IDH and 6PGDH) were measured in the offspring of each cross on starch gel after electrophoresis. Broad sense heritabilities and additive genetic variances were estimated in all four samples. Most of the activity variation was observed within the isofemale lines. The isofemale lines tended to be more different in the distilleries than in the farmyards. There was no significant difference in the average activities between the two habitats for any of the enzymes investigated. The additive genetic variance of the enzyme activities did not exhibit a consistent habitat pattern. In the farmyard habitat, we detected a higher activity variation in Tiszafüred than in the other village. Strong correlation was observed among the activities of the enzymes investigated. Correlation coefficients indicated higher level of correlation in the samples collected in Tiszafüred than in those originating from Tiszaszolos. The heritability values were rather high and they had a considerable variation both between the habitats and across the enzymes.
- Published
- 2004
- Full Text
- View/download PDF
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