521 results on '"Nitrogen heterocycles"'
Search Results
2. Third-Generation CD73 Inhibitors Based on a 4,6-Disubstituted-2-Thiopyridine Scaffold.
- Author
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Grosjean F, Shaldaeva M, Cros-Perrial E, Rodriguez C, Ghoteimi R, Lebrun A, Gao ZG, Uttaro JP, Mathé C, Jacobson KA, Petter Jordheim L, Ménétrier-Caux C, Chaloin L, and Peyrottes S
- Abstract
Various series of 4,6-disubstituted-2-thiopyridine derivatives were synthesized and evaluated as potential ecto-5'-nucleotidase (CD73) inhibitors. Altogether, about ninety compounds were prepared using a general synthetic pathway involving one or two steps (eventually one-pot) procedures. Variation of the nature of the substituents in positions 4 and 6 (methyl, trifluoromethyl or phenyl) of the thiopurine ring, as well as on the thiol function, was examined and led to marked differences both in term of reactivity and ability to interfere with the putative target protein. Using a functional assay on immune cells, few compounds belonging to series 4 were shown to be able to antagonize the inhibition of the T-cell proliferation at both 100 μM and 10 μM (completely for 4 ab and partially for 4 ai), that is as potent as AOPCP which entirely reversed the inhibitory impact of exogenous ATP on T cell proliferation until 62.5 μM. In addition, we have shown that both compounds (4 ab and 4 ai) were also capable of moderately inhibiting the hA
2A receptor with Ki in the μmolar range in HEK-293 cells. Thus, with the aim to reduce the molecular size and the lipophilicity of our initial scaffold, we finally observed by serendipity a modification of the potential target of our compounds., (© 2024 The Author(s). ChemMedChem published by Wiley-VCH GmbH.)- Published
- 2024
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3. Revisiting the Reaction of Sulfur Ylides with Acetylenic Esters: Synthesis of Trisubstituted 1,3-Dienes, α-Carbonyl Vinyl Sulfoxides and α-Carbonyl Vinyl Sulfoxonium Ylides.
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de Jesus MP and Burtoloso ACB
- Abstract
We report herein a reexamination of the reactions between sulfoxonium ylides and acetylenic esters. Continuing our previous study of conjugate additions using α-carbonyl sulfoxonium ylides, we came across an interesting transformation when dimethyl acetylenedicarboxylate (DMAD) was employed as a Michael acceptor. Trisubstituted electron-deficient 1,3-dienes and α-carbonyl vinyl sulfoxides were obtained for the first time from these sulfur ylides, in a stereoselective manner (exclusively forming the E-isomer), achieving yields of up to 70 % and 83 %, respectively. Selected dienes were subsequently utilized in the synthesis of novel nitrogen heterocycles. Interestingly, when di-tert-butyl acetylenedicarboxylate (DtBAD) or alkyl propiolates were evaluated, the isolated product arose from the classical Michael addition, yielding α-carbonyl vinyl sulfoxonium ylides in yields of up to 89 %., (© 2024 Wiley-VCH GmbH.)
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- 2024
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4. Novel Prodrug Strategies for the Treatment of Tuberculosis.
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Kim CG, Jose J, Hay MP, and Choi PJ
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- Humans, Nitroimidazoles chemistry, Nitroimidazoles pharmacology, Nitroimidazoles therapeutic use, Nitroimidazoles chemical synthesis, Animals, Prodrugs chemistry, Prodrugs pharmacology, Prodrugs therapeutic use, Prodrugs chemical synthesis, Antitubercular Agents chemistry, Antitubercular Agents pharmacology, Antitubercular Agents chemical synthesis, Antitubercular Agents therapeutic use, Mycobacterium tuberculosis drug effects, Tuberculosis drug therapy
- Abstract
The emergence of drug-resistant strains of Mycobacterium tuberculosis (M.tb), the causative agent of tuberculosis, is on the rise and increasing antimicrobial resistance is a global threat. This phenomenon necessitates new drug design methods such as a prodrug strategy to develop novel antitubercular agents. The prodrug strategy is a viable and useful means to improve the absorption, distribution, metabolism, excretion and toxicity (ADMET) profiles of pharmacologically active agents. Granulomas are a pathological hallmark of M.tb infection and bear a remarkable resemblance to the tumour microenvironment, including regions of hypoxia. The hypoxic environment observed in the two structures offer an exceptional opportunity to deliver antitubercular agents selectively in a similar manner to hypoxia activated prodrugs in cancer therapy. Nitroimidazoles have been studied extensively as bioactivated prodrugs of cancer, and their suitability as substrates for mammalian reductases highlight their huge potential. This review will discuss the mechanism of action and resistance mechanisms of the current prodrugs used for the treatment of tuberculosis. It will also highlight the potential advantages and challenges of using hypoxia activated prodrugs as a viable strategy to target latent M.tb in hypoxic regions of granulomas., (© 2024 The Author(s). Chemistry - An Asian Journal published by Wiley-VCH GmbH.)
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- 2024
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5. Skeletal Editing via Transition-Metal-Catalyzed Nitrene Insertion.
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Bhatti P, Gupta A, Chaudhari SB, Valmiki RK, Laha JK, and Manna S
- Abstract
Metal-nitrenes are valuable reactive intermediates for synthesis and are widely used to construct biologically relevant scaffolds, complexes and functionalized molecules. The ring expansion of cyclic molecules via single-nitrogen-atom insertion via nitrene or metal-nitrenoid intermediates has emerged as a promising modern strategy for driving advantageous nitrogen-rich compound synthesis. In recent years, the catalytic insertion of a single nitrogen atom into carbocycles, leading to N-heterocycles, has become an important focus of modern synthetic approaches with applications in medicinal chemistry, materials science, and industry. Catalytic single-nitrogen-atom insertions have been increasing in prominence in modern organic synthesis due to their capability to construct high-value added nitrogen-containing heterocycles from simple feedstocks. In this review, we will discuss the rapidly growing field of skeletal editing via single-nitrogen-atom insertion using transition metal catalysis to access nitrogen-containing heterocycles, with a focus on nitrogen insertion across a wide spectrum of carbocycles., (© 2024 The Chemical Society of Japan and Wiley-VCH GmbH.)
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- 2024
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6. Unlocking the Potential of Pyrrole: Recent Advances in New Pyrrole-Containing Compounds with Antibacterial Potential.
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Rusu A, Oancea OL, Tanase C, and Uncu L
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- Structure-Activity Relationship, Humans, Bacteria drug effects, Microbial Sensitivity Tests, Pyrroles chemistry, Pyrroles pharmacology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology
- Abstract
Nitrogen heterocycles are valuable structural elements in the molecules of antibacterial drugs approved and used to treat bacterial infections. Pyrrole is a five-atom heterocycle found in many natural compounds with biological activity, including antibacterial activity. Numerous compounds are being develop based on the pyrrole heterocycle as new potential antibacterial drugs. Due to the phenomenon of antibacterial resistance, there is a continuous need to create new effective antibacterials. In the scientific literature, we have identified the most relevant studies that aim to develop new compounds, such as pyrrole derivatives, that are proven to have antibacterial activity. Nature is an endless reservoir of inspiration for designing new compounds based on the structure of pyrrole heterocycles such as calcimycin, lynamycins, marinopyrroles, nargenicines, phallusialides, and others. However, many other synthetic compounds based on the pyrrole heterocycle have been developed and can be optimized in the future. The identified compounds were classified according to the type of chemical structure. The chemical structure-activity relationships, mechanisms of action, and antibacterial effectiveness of the most valuable compounds were highlighted. This review highlights scientific progress in designing new pyrrole-containing compounds and provides examples of lead compounds that can be successfully optimized further.
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- 2024
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7. Azolopyrimidine-Based Thioethers: Synthesis via Cross-Dehydrogenative C-S Coupling and In Silico Evaluation of Anti-SARS-CoV-2 Activity.
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Akulov AA, Silaeva AI, Varaksin MV, Butorin II, Lyapustin DN, Drokin RA, Kotovskaya SK, Zaykovskaya AV, Pyankov OV, Rusinov VL, Charushin VN, and Chupakhin ON
- Abstract
Azoloazine derivatives are known as promising small molecules that are potentially able to counteract a broad spectrum of RNA viruses including SARS-CoV-2. However, a pool of synthetic pathways to provide convenient structural modification of such compounds without de novo construction of the heterocyclic scaffold is rather limited so far. This work proposes an approach to the direct C(sp
2 )-H functionalization of azolopyrimidine substrates with aromatic thiol residues, mediated by the iodine/persulfate reagent system. The reported herein sulfenylation protocol has afforded a series of previously undescribed azolopyrimidine-based thioethers obtained in yields of up to 87 %. Applicability of the approach to the selenium-centered synthons has been demonstrated as well. Besides, the in silico study with regard to the achieved cross-coupling products has suggested the possible affinity to the SARS-CoV-2 main protease (Mpro ), as follows from the conducted pharmacophore search and the molecular docking experiments. As a result, the developed synthetic transformation is expected to be of utility in the design of novel antiviral agents based on small azaheterocyclic molecules., (© 2024 Wiley-VCH GmbH.)- Published
- 2024
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8. A TEMPO-N 3 Complex Enables the Electrochemical C-H Azidation of N-Heterocycles through the Cleavage of Alkoxyamines.
- Author
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Biswas S, Ghosh S, and Das I
- Abstract
A TEMPO-N
3 charge-transfer complex enables the electrochemical C-H azidation of various N-heterocycles. The TEMPO+ ion, generated from TEMPO, assists in producing N3 ⋅ by forming a TEMPO-N3 complex with N3 - . The formation of this complex is supported by UV-vis absorption spectra, cyclic voltammetry studies, and ESI-HRMS studies. The reaction likely proceeds by forming a highly labile azidooxygenation adduct, which undergoes oxidative alkoxyamine mesolytic cleavage. Subsequent deprotonation of the resulting carbocation exclusively produces the azidation product. It is important to note that substituted olefins generally yield azidooxygenation or diazidation as the final product. Our study demonstrates that N-heterocycles deliver a selective monoazidation product, possibly due to steric reasons. ESI-HRMS studies provide evidence for forming azidooxygenation and alkoxyamine radical cation adducts. The regio- and chemoselectivity of this azidation reaction using the TEMPO-N3 complex have been discussed., (© 2024 Wiley-VCH GmbH.)- Published
- 2024
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9. Convergent Paired Electrolysis for [3+2] Cycloaddition of Azidotrimethylsilane with N-Heterocycles.
- Author
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Bankura A, Ghosh S, Biswas S, and Das I
- Abstract
A widely used method to obtain tetrazoles is through the azide and nitrile [3+2] cycloaddition. However, this process often involves using non-recyclable transition metals or Lewis acid catalysts and stoichiometric amounts of oxidants and additives, which reduces atom efficiency. We have discovered a convergent paired electrochemical reaction to perform this cycloaddition reaction, without the need for metal catalysts or oxidants. This tetrazolation strategy uses azidotrimethylsilane (TMSN
3 ) and N-heterocycles in an undivided cell at a constant current. We use a mixture of CH3 CN and equivalent amounts of H2 O as co-solvent at room temperature. It is crucial to produce a stoichiometric amount of active hydroxyl ions through the cathodic reduction of water. Cyclic voltammetry (CV) studies and control experiments confirm that the cycloaddition reaction is specific to the electrode electron transfer process, eliminating the need for a mediator to shuttle electrons. This metal- and oxidant-free strategy is highly compatible with different functional groups and produces products with moderate to good yields. We have successfully tetrazolated bioactive compounds at a late stage, scaled up batches efficiently, and synthesized free amino-containing N-heterocycles via denitrogenation of tetrazoles., (© 2024 Wiley-VCH GmbH.)- Published
- 2024
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10. Absorption, Fluorescence, and Two-Photon Excitation Ability of 5-o-Tolyl-11 (or 13)-o-tolylisoindolo[2,1-a]quinolines Prepared by Ring-Closing Metathesis and [2+3] Cycloaddition.
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Wada Y, Jang K, Ishii H, Watakabe Y, Tsutsumi M, Sako M, Takehara T, Suzuki T, Tsujino H, Tsutsumi Y, Nemoto T, and Arisawa M
- Abstract
We have successfully improved the fluorescence quantum yield of isoindolo[2,1-a]quinoline derivatives by suppressing the rotation of the phenyl groups at positions 5 and 11 (or 13). Additionally, we found that the planarity of these phenyl groups at positions 5 and 11 (or 13) of isoindolo[2,1-a]quinoline derivatives is crucial for two-photon absorption properties., (© 2024 The Author(s). Chemistry - An Asian Journal published by Wiley-VCH GmbH.)
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- 2024
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11. Non-Alternant Nanographenes Bearing N-Doped Non-Hexagonal Pairs: Synthesis, Structural Analysis and Photophysical Properties.
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Luo H and Liu J
- Abstract
Introduction of non-hexagons and/or heteroatoms allows for finely tuning the physicochemical properties of nanographenes. Heteroatoms doping have dominated the modulation of nanographenes with tunable band gap, rich electrochemical activities and so on. The pair of non-hexagons, for instance, pentagon-heptagon pairs, have furnished nanographenes with aromatic and/or antiaromatic characteristics, open-shell properties and so on. In order to meet the growing demand for versatile nanographenes in materials science, research on novel nanographenes with heteroatom doped non-hexagonal pairs has been aroused in recent years. In this review, we focus on nanographenes with nitrogen-doped non-hexagonal paris including the synthesis, structure analysis, photophysical properties, and potential applications in organic devices., (© 2024 The Author(s). Angewandte Chemie International Edition published by Wiley-VCH GmbH.)
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- 2024
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12. First Alliance of Pyrazole and Furoxan Leading to High-Performance Energetic Materials.
- Author
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Khoranyan TE, Larin AA, Suponitsky KY, Ananyev IV, Melnikov IN, Kosareva EK, Muravyev NV, Dalinger IL, Pivkina AN, and Fershtat LL
- Abstract
Nitrogen heterocyclic scaffolds retain their leading position as valuable building blocks in material science, particularly for the design of small-molecule energetic materials. However, the search for more balanced combinations of directly linked heterocyclic cores is far from being exhausted and aims to reach ideally balanced high-energy substances. Herein, we present the synthetic route to novel pyrazole-furoxan framework enriched with nitro groups and demonstrate a promising set of properties, viz., good thermal stability, acceptable mechanical sensitivity, and high detonation performance. In-depth crystal analysis showed that the isomers having lower-impact sensitivity values in both types of regioisomeric pairs are those with the exocyclic furoxan oxygen atom being closer to the pyrazole ring. Owing to the favorable combination of high crystal densities (1.83-1.93 g cm
-3 ), positive oxygen balance to CO (up to +13.9%), and high enthalpies of formation (322-435 kJ mol-1 ), the synthesized compounds show high calculated detonation velocities (8.4-9.1 km s-1 ) and excellent metal accelerating abilities. The incorporation of the 3-nitrofuroxan moiety increases the thermal stability (by ca. 20 °C) and decreases the mechanical sensitivity of target hybrid materials in both types of regioisomeric pairs. Simultaneously, the detonation performance of 3-nitrofuroxans is almost identical to that of 4-nitrofuroxans, highlighting the potential of the regioisomeric tunability in the future design of energetic materials.- Published
- 2024
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13. Skeletal Editing by Hypervalent Iodine Mediated Nitrogen Insertion.
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Gupta A, Bhatti P, Laha JK, and Manna S
- Abstract
Hypervalent iodine reagents are versatile and readily accessible reagents that have been extensively applied in contemporary synthesis in modern organic chemistry. Among them, iodonitrene (ArI=NR), is a powerful reactive species, widely used for a single-nitrogen-atom insertion reaction, and skeletal editing to construct N-heterocycles. Skeletal editing with reactive iodonitrene components has recently emerged as an exciting approach in modern chemical transformation. These reagents have been extensively used to produce biologically relevant heterocycles and functionalized molecular architectures. Recently, the insertion of a nitrogen-atom into hydrocarbons to generate N-heterocyclic compounds using hypervalent iodine reagents has been a significant focus in the field of molecular editing reactions. In this review, we discuss the rapidly emerging field of nitrene insertion, including skeletal editing and nitrogen insertion, using hypervalent iodine reagents to access nitrogen-containing heterocycles, and the current mechanistic understanding of these processes., (© 2024 Wiley-VCH GmbH.)
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- 2024
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14. Direct C3-H Alkylation and Alkenylation of Quinolines with Enones.
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Xu L, Wang X, Yang D, Yang X, and Wang D
- Abstract
Conversion of quinoline C-H bonds into C-C bonds is essential for obtaining the enormous array of derivatives required for pharmaceutical and agrochemical development. Despite over a century of synthetic efforts, direct alkylation and alkenylation at C3-H positions in a wide array of quinoline precursors remain predominantly challenging and elusive. This report outlines the first successful quinoline C3-H alkylation and alkenylation reactions, exhibiting exceptional regio- and stereoselectivity, all achieved under redox-neutral and transition-metal-free conditions. The method involves a three-step, one-pot or two-pot sequence, including 1,4-dearomative addition, functionalization at C3, and elimination or transalkylation to produce 3-alkylated/alkenylated quinolines. The presence of a carbonyl group in these products allows for further synthetic manipulations, enabling the production of cyanides, amides, amines, and simple alkyl derivatives., (© 2024 Wiley-VCH GmbH.)
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- 2024
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15. Tandem diazotization/cyclization approach for the synthesis of a fused 1,2,3-triazinone-furazan/furoxan heterocyclic system.
- Author
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Sidunets YA, Melekhina VG, and Fershtat LL
- Abstract
A straightforward protocol for the synthesis of a previously unknown [1,2,5]oxadiazolo[3,4- d ][1,2,3]triazin-7(6 H )-one heterocyclic system was developed. The described approach is based on tandem diazotization/azo coupling reactions of (1,2,5-oxadiazolyl)carboxamide derivatives bearing both aromatic and aliphatic substituents. The NO-donor ability of the synthesized furoxano[3,4- d ][1,2,3]triazin-7(6 H )-ones was additionally evaluated. The elaborated method provides access to novel nitrogen heterocyclic compounds with potential applications as drug candidates or thermostable components of functional organic materials., (Copyright © 2024, Sidunets et al.)
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- 2024
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16. Cycloadditions of Diazoalkenes with P 4 and tBuCP: Access to Diazaphospholes.
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Hauer S, Reitz J, Koike T, Hansmann MM, and Wolf R
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Diazoalkenes readily react with tert-butylphosphaalkyne (tBuCP) and white phosphorus (P
4 ) to afford novel phosphorus heterocycles, 3H-1,2,4-diazamonophospholes and 1,2,3,4-diazadiphospholes. Both species represent rare examples of neutral heterophospholes. The mechanism of formation and the electronic structures of these formal (3+2) cycloaddition products were analyzed computationally. The new phospholes form structurally diverse coordination compounds with transition metal and main group elements. Given the growing number of stable diazoalkenes, this work offers a straightforward route to neutral aza(di-)phospholes as a new ligand class., (© 2024 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)- Published
- 2024
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17. Coinage Metal Complexes of a Sterically Encumbered Anionic Pyridylborate.
- Author
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Vanga M, Muñoz-Castro A, and Dias HVR
- Abstract
Sterically loaded, anionic pyridine has been synthesized and utilized successfully in the stabilization of a isoleptic series of coinage metal complexes. The treatment of [4-(Ph
3 B)-2,6-Trip2 Py]K (Trip=2,4,6-i Pr3 C6 H2 ) with CuBr(PPh3 ), AgCl(PPh3 ) or AuCl(PPh3 ) (Py=pyridine) afforded the corresponding [4-(Ph3 B)-2,6-Trip2 Py]M(PPh3 ) (M=Au, Ag, Cu) complexes, via salt metathesis, as isolable, crystalline solids. Notably, these reactions avoid the facile single electron transfer chemistry reported with the less bulky ligand systems. The X-ray structures revealed that they are two-coordinate metal adducts. The M-N and M-P bond distances are longest in the silver and shortest in the copper adduct among the three group 11 family members. Computational analysis revealed an interesting stability dependence on steric bulk of the anionic pyridine (i. e., pyridyl borate) ligand. A comparison of structures and bonding of [4-(Ph3 B)-2,6-Trip2 Py]Au(PPh3 ) to pyridine and m-terphenyl complexes, {[2,6-Trip2 Py]Au(PPh3 )}[SbF6 ] and [2,6-Trip2 Ph]Au(PPh3 ) are also provided. The Au(I) isocyanide complex, [4-(Ph3 B)-2,6-Trip2 Py]Au(CNBut ) has been stabilized using the same anionic pyridylborate illustrating that it can support other gold-ligand moieties as well., (© 2024 Wiley-VCH GmbH.)- Published
- 2024
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18. Energy recovery from syngas and pyrolysis wastewaters with anaerobic mixed cultures.
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Robazza A and Neumann A
- Abstract
The anaerobic digestion of aqueous condensate from fast pyrolysis is a promising technology for enhancing carbon and energy recovery from waste. Syngas, another pyrolysis product, could be integrated as a co-substrate to improve process efficiency. However, limited knowledge exists on the co-fermentation of pyrolysis syngas and aqueous condensate by anaerobic cultures and the effects of substrate toxicity. This work investigates the ability of mesophilic and thermophilic anaerobic mixed cultures to co-ferment syngas and the aqueous condensate from either sewage sludge or polyethylene plastics pyrolysis in semi-batch bottle fermentations. It identifies inhibitory concentrations for carboxydotrophic and methanogenic reactions, examines specific component removal and assesses energy recovery potential. The results show successful co-fermentation of syngas and aqueous condensate components like phenols and N-heterocycles. However, the characteristics and load of the aqueous condensates affected process performance and product formation. The toxicity, likely resulting from the synergistic effect of multiple toxicants, depended on the PACs' composition. At 37 °C, concentrations of 15.6 g
COD /gVSS and 7.8 gCOD /gVSS of sewage sludge-derived aqueous condensate inhibited by 50% carboxydotrophic and methanogenic activity, respectively. At 55 °C, loads between 3.9 and 6.8 gCOD /gVSS inhibited by 50% both reactions. Polyethylene plastics condensate showed higher toxicity, with 2.8 gCOD /gVSS and 0.3 gCOD /gVSS at 37 °C decreasing carboxydotrophic and methanogenic rates by 50%. At 55 °C, 0.3 gCOD /gVSS inhibited by 50% CO uptake rates and methanogenesis. Increasing PAC loads reduced methane production and promoted short-chain carboxylates formation. The recalcitrant components in sewage sludge condensate hindered e-mol recovery, while plastics condensate showed high e-mol recoveries despite the stronger toxicity. Even with challenges posed by substrate toxicity and composition variations, the successful conversion of syngas and aqueous condensates highlights the potential of this technology in advancing carbon and energy recovery from anthropogenic waste streams., (© 2024. The Author(s).)- Published
- 2024
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19. Harnessing unprotected deactivated amines and arylglyoxals in the Ugi reaction for the synthesis of fused complex nitrogen heterocycles.
- Author
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Gómez-Ayuso J, Pertejo P, Hermosilla T, Carreira-Barral I, Quesada R, and García-Valverde M
- Abstract
Piperazines and diazepines are examples of nitrogen heterocycles present in many marketed drugs highlighting their importance in the discovery of novel bioactive compounds. However, their synthesis often faces challenges, including complex functionalization and lengthy reaction sequences. Multicomponent reactions, notably the Ugi reaction, have emerged as powerful tools to address these hurdles. Here, we have demonstrated the possibility of using the combination of arylglyoxals and carboxylic acids tethered to nonprotected deactivated amines as a powerful strategy for the synthesis of complex fused heterocycles. The limited nucleophilic character of the amino group of the anthranilic acid, indole-2-carboxylic acid, pyrrole-2-carboxylic acid or N -phenylglycine has allowed the use of these compounds in the Ugi reaction without triggering competitive reactions. The additional functional group present in the resulting Ugi adduct can be leveraged in different post-condensation strategies to easily generate multiple fused nitrogen heterocycles including benzodiazepinone and piperazinone cores., (Copyright © 2024, Gómez-Ayuso et al.)
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- 2024
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20. Recent Discovery of Nitrogen Heterocycles from Marine-Derived Aspergillus Species.
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Shi J, Yu M, Chen W, Chen S, Qiu Y, Xu Z, Wang Y, Huang G, and Zheng C
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- Heterocyclic Compounds pharmacology, Heterocyclic Compounds chemistry, Nitrogen chemistry, Animals, Biological Products pharmacology, Biological Products chemistry, Humans, Drug Discovery methods, Structure-Activity Relationship, Aspergillus metabolism, Aquatic Organisms, Alkaloids pharmacology, Alkaloids chemistry
- Abstract
Nitrogen heterocycles have drawn considerable attention because of their structurally novel and significant biological activities. Marine-derived fungi, especially the Aspergillus species, possess unique metabolic pathways to produce secondary metabolites with novel structures and potent biological activities. This review prioritizes the structural diversity and biological activities of nitrogen heterocycles that are produced by marine-derived Aspergillus species from January 2019 to January 2024, and their relevant biological activities. A total of 306 new nitrogen heterocycles, including seven major categories-indole alkaloids, diketopiperazine alkaloids, quinazoline alkaloids, isoquinoline alkaloids pyrrolidine alkaloids, cyclopeptide alkaloids, and other heterocyclic alkaloids-are presented in this review. Among these nitrogen heterocycles, 52 compounds had novel skeleton structures. Remarkably, 103 compounds showed various biological activities, such as cytotoxic, antimicrobial, anti-inflammatory, antifungal, anti-virus, and enzyme-inhibitory activities, and 21 compounds showed potent activities. This paper will guide further investigations into the structural diversity and biological activities of nitrogen heterocycles derived from the Aspergillus species and their potential contributions to the future development of new natural drug products in the medicinal and agricultural fields.
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- 2024
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21. Application and challenges of nitrogen heterocycles in PROTAC linker.
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Li Y, Qu J, Jiang L, Peng X, Wu K, Chen M, Peng Y, and Cao X
- Subjects
- Humans, Molecular Structure, Animals, Ligands, Heterocyclic Compounds chemistry, Heterocyclic Compounds pharmacology, Heterocyclic Compounds chemical synthesis, Nitrogen chemistry
- Abstract
The absence of effective active pockets makes traditional molecularly targeted drug strategies ineffective against 80 % of human disease-related proteins. The PROTAC technology effectively makes up for the deficiency of traditional molecular targeted drugs, which produces drug activity by degrading rather than inhibiting the target protein. The degradation of PROTAC is not only affected by POI ligand and E3 ligand, but by the selection of suitable linker which can play an important role in the efficiency and selectivity of the degradation. In the early exploring stage of the PROTAC, flexible chains were priorly applied as the linker of PROTAC. Although PROTAC with flexible chains as linkers sometimes perform well in vitro bioactivity evaluations, the introduction of lipophilic flexible chains reduces the hydrophilicity of these molecules, resulting in generally poor pharmacokinetic characteristics and pharmacological activities in vivo. In addition, recent reports have also shown that some PROTAC with flexible chains have some risks to causing hemolysis in vivo. Therefore, PROTAC with flexible chains show less druggability and large difficulty to entering the clinical trial stage. On the other hand, the application of nitrogen heterocycles in the design of PROTAC linkers has been widely reported in recent years. More and more reports have shown that the introduction of nitrogen heterocycles in the linker not only can effectively improves the metabolism of PROTAC in vivo, but also can enhance the degradation efficiency and selectivity of PROTAC. These PROTAC with nitrogen heterocycle linkers have attracted much attention of pharmaceutical chemists. The introduction of nitrogen heterocycles in the linker deserves priority consideration in the primary design of the PROTAC based on various druggabilities including pharmacokinetic characteristics and pharmacological activity. In this work, we summarized the optimization process and progress of nitrogen heterocyclic rings as the PROTAC linker in recent years. However, there were still limited understanding of how to discover, design and optimize PROTAC. For example, the selection of the types of nitrogen heterocycles and the optimization sites of this linker are challenges for researchers, choosing between four to six-membered nitrogen heterocycles, selecting from saturated to unsaturated ones, and even optimizing the length and extension angle of the linker. There is a truly need for theoretical explanation and elucidation of the PROTAC to guide the developing of more effective and valuable PROTAC., Competing Interests: Declaration of competing interest The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article., (Copyright © 2024 Elsevier Masson SAS. All rights reserved.)
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- 2024
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22. Novel Pyrazole-Chalcone Hybrids: Synthesis and Computational Insights Against Breast Cancer.
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Dabhade PS, Dabhade MP, Rathod LS, Dhawale SA, More SA, Chaudhari SY, and Mokale SN
- Subjects
- Humans, Female, Structure-Activity Relationship, Molecular Structure, Chalcones chemistry, Chalcones pharmacology, Chalcones chemical synthesis, Molecular Docking Simulation, Chalcone chemistry, Chalcone pharmacology, Cell Line, Tumor, Estrogen Receptor alpha metabolism, Estrogen Receptor alpha antagonists & inhibitors, Dose-Response Relationship, Drug, Animals, Rats, Pyrazoles chemistry, Pyrazoles pharmacology, Pyrazoles chemical synthesis, Breast Neoplasms drug therapy, Breast Neoplasms pathology, Breast Neoplasms metabolism, Antineoplastic Agents pharmacology, Antineoplastic Agents chemistry, Antineoplastic Agents chemical synthesis, Drug Screening Assays, Antitumor, Cell Proliferation drug effects, Apoptosis drug effects
- Abstract
More women die of breast cancer than of any other malignancy. The resistance and toxicity of traditional hormone therapy created an urgent need for potential molecules for treating breast cancer effectively. Novel biphenyl-substituted pyrazole chalcones linked to a pyrrolidine ring were designed by using a hybridization approach. The hybrids were assessed against MCF-7 and MDA-MB-231 cells by NRU assay. Among them, 8 k, 8 d, 8 m, 8 h, and 8 f showed significantly potent IC
50 values: 0.17, 5.48, 8.13, 20.51, and 23.61 μM) respectively, on MCF-7 cells compared to the positive control Raloxifene and Tamoxifen. Furthermore, most active compound 8 k [3-(3-(4-fluorophenyl)-1-phenyl-1H-pyrazol-4-yl)-1-(2-(2-(pyrrolidin-1-yl)-ethoxy)-phenyl)-chalcone] showed cell death induced through apoptosis, cell cycle arrest at the G2/M phase, and demonstrated decrease of ER-α protein in western blotting study. Docking studies of 8 k and 8 d established adequate interactions with estrogen receptor-α as required for SERM binding. The active hybrids exhibited good pharmacokinetic properties for oral bioavailability and drug-likeness. Whereas, RMSD, RMSF, and Rg values from Molecular dynamics studies stipulated stability of the complex formed between compound 8 k and receptor. All of these findings strongly indicate the antiproliferative potential of pyrazole-chalcone hybrids for the treatment of breast cancer., (© 2024 Wiley-VHCA AG, Zurich, Switzerland.)- Published
- 2024
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23. Mechanistic Approach Toward the C4-Selective Amination of Pyridines via Nucleophilic Substitution of Hydrogen.
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Choi H, Ham WS, van Bonn P, Zhang J, Kim D, and Chang S
- Abstract
The development of site-selective functionalization of N-heteroarenes is highly desirable in streamlined synthesis. In this context, direct amination of pyridines stands as an important synthetic methodology, with particular emphasis on accessing 4-aminopyridines, a versatile pharmacophore in medicinal chemistry. Herein, we report a reaction manifold for the C4-selective amination of pyridines by employing nucleophilic substitution of hydrogen (S
N H). Through 4-pyridyl pyridinium salt intermediates, 4-aminopyridine products are obtained in reaction with aqueous ammonia without intermediate isolation. The notable regioselectivity was achieved by the electronic tuning of the external pyridine reagents along with the maximization of polarizability in the proton elimination stage. Further mechanistic investigations provided a guiding principle for the selective C-H pyridination of additional N-heteroarenes, presenting a strategic avenue for installation of diverse functional groups., (© 2024 Wiley-VCH GmbH.)- Published
- 2024
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24. Bypassing Ammonia: From N 2 to Nitrogen Heterocycles without N 1 Intermediates or Transition Metals.
- Author
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Weber M, Kupfer T, Arrowsmith M, Dewhurst RD, Rang M, Ritschel B, Titlbach S, Ernst M, Rodrigues MO, da Silva Júnior EN, and Braunschweig H
- Abstract
Diboradiazene compounds, derived in one step from the boron-mediated reduction of dinitrogen (N
2 ), were treated separately with sulfur and acetic anhydride, providing heterocyclic compounds that are BN isosteres of thiophene and 1,3-oxazole, respectively. These simple reactions represent the final steps in two-step routes to complex heterocycles from N2 that both circumvent the need for transition metal reagents and completely bypass the traditional intermediate ammonia., (© 2024 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)- Published
- 2024
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25. Targeted Metabolic Investigation of Ligandrol and Analytical Methods Validation for Its Main Long-term Metabolite.
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Angelis YS, Sakellariou P, Petrou M, and Pitsinos EN
- Subjects
- Humans, Chromatography, Liquid methods, Doping in Sports prevention & control, Pyrrolidinones chemistry, Pyrrolidinones metabolism, Gas Chromatography-Mass Spectrometry
- Abstract
Prompted by the need for related analytical reference material in the frame of the fight against doping in sports, synthetic efforts towards the main long-term bishydroxylated metabolite (LGD-LTM1) of the nonsteroidal selective androgen receptor modulator (SARM) ligandrol have produced related derivatives that were exploited for a targeted metabolite analysis of urine samples obtained in the course of previous excretion studies of this SARM. Further clarifying ligandrol's metabolic profile, the availability of synthetic reference material permitted the structural elucidation of a previously reported pyrrolidinone-type metabolite and revealed its potential analytical utility as an additional long-term marker. Moreover, synthetic reference material enabled the comparison and validation of liquid chromatography coupled with mass spectrometry (LC-MS)-based and gas chromatography coupled with mass spectrometry (GC-MS)-based detection and identification methods focusing on the LGD-LTM1 marker., (© 2024 The Authors. ChemPlusChem published by Wiley-VCH GmbH.)
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- 2024
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26. Synthesis and Evaluation of 5-(Heteroarylmethylene)hydantoins as Glycogen Synthase Kinase-3β Inhibitors.
- Author
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Schneider NO, Gilreath K, Burkett DJ, St Maurice M, and Donaldson WA
- Abstract
Glycogen synthase kinase-3 (GSK-3) is a serine/threonine kinase which plays a center role in the phosphorylation of a wide variety of proteins, generally leading to their inactivation. As such, GSK-3 is viewed as a therapeutic target. An ever-increasing number of small organic molecule inhibitors of GSK-3 have been reported. Phenylmethylene hydantoins are known to exhibit a wide range of inhibitory activities including for GSK-3β. A family of fourteen 2-heterocycle substituted methylene hydantoins ( 14 , 17 - 29 ) were prepared and evaluated for the inhibition of GSK-3β at 25 μM. The IC
50 values of five of these compounds was determined; the two best inhibitors are 5-[(4'-chloro-2-pyridinyl)methylene]hydantoin (IC50 = 2.14 ± 0.18 μM) and 5-[(6'-bromo-2-pyridinyl)methylene]hydantoin (IC50 = 3.39 ± 0.16 μM). The computational docking of the compounds with GSK-3β (pdb 1q41) revealed poses with hydrogen bonding to the backbone at Val135. The 5-[(heteroaryl)methylene]hydantoins did not strongly inhibit other metalloenzymes, demonstrating poor inhibitory activity against matrix metalloproteinase-12 at 25 μM and against human carbonic anhydrase at 200 μM, and were not inhibitors for Staphylococcus aureus pyruvate carboxylase at concentrations >1000 μM.- Published
- 2024
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27. N-Aryl-DABCO Salts as an Unprecedented Sensing Platform for the Detection of Thiols and Selenols.
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Ranishenka B, Lamekina Y, Seviarynchyk T, Bugaenko D, Shmanai V, and Karchava A
- Abstract
Quaternary N-aryl-DABCO salts were introduced for the first time as a highly selective sensing platform for thiols and selenols. By employing this platform, a highly sensitive coumarin based "off-on" fluorescent probe was designed and synthesized. The probe possesses a good solubility in water, low background fluorescence, and, most importantly, demonstrates high selectivity to aryl thiols and selenols over their aliphatic counterparts and other common nucleophiles. A dramatic increase in fluorescence intensity is achieved through the selective cleavage of the quaternized DABCO-ring, yielding a piperazine derivatives with a high fluorescence quantum yield (~72 %). Moreover, stability of the probe to the most used reducing agents DTT and TCEP was demonstrated. The limits of detection for p-thiocresol and phenyl selenide were evaluated to be 22 nM and 6 nM, respectively., (© 2024 Wiley-VCH GmbH.)
- Published
- 2024
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28. (Diazomethyl)dimethylphosphine Oxide - A Diazoalkane Reagent for [3+2] Cycloadditions.
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Slobodyanyuk EY, Tarasiuk I, Pasichnyk T, Volochnyuk DM, Sibgatulin DO, and Grygorenko OO
- Abstract
A safe and efficient method for the in-situ preparation of (diazomethyl)dimethylphosphine oxide - a hereto unexplored diazoalkane reagent - is developed. The method is based on the diazotization of the corresponding P(O)Me
2 -substituted amine (readily available in multigram quantities) in non-aqueous media. The protocol provides the target product as ca. 1.5 M CHCl3 solution which is stable at -18 °C. The utility of the synthesized diazoalkane is illustrated by its [3+2] cycloaddition with electron-poor alkynes and alkenes providing the corresponding P(O)Me2 -substituted pyrazoles and pyrazolines with moderate to good efficiency. In this view, the title compound represents and an important extension of medicinally relevant phosphine oxide reagents., (© 2024 Wiley‐VCH GmbH.)- Published
- 2024
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29. Prebiotic Vitamin B 3 Synthesis in Carbonaceous Planetesimals.
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Paschek K, Lee M, Semenov DA, and Henning TK
- Abstract
Aqueous chemistry within carbonaceous planetesimals is promising for synthesizing prebiotic organic matter essential to all life. Meteorites derived from these planetesimals delivered these life building blocks to the early Earth, potentially facilitating the origins of life. Here, we studied the formation of vitamin B
3 as it is an important precursor of the coenzyme NAD(P)(H), which is essential for the metabolism of all life as we know it. We propose a new reaction mechanism based on known experiments in the literature that explains the synthesis of vitamin B3 . It combines the sugar precursors glyceraldehyde or dihydroxyacetone with the amino acids aspartic acid or asparagine in aqueous solution without oxygen or other oxidizing agents. We performed thermochemical equilibrium calculations to test the thermodynamic favorability. The predicted vitamin B3 abundances resulting from this new pathway were compared with measured values in asteroids and meteorites. We conclude that competition for reactants and decomposition by hydrolysis are necessary to explain the prebiotic content of meteorites. In sum, our model fits well into the complex network of chemical pathways active in this environment., (© 2023 The Authors. ChemPlusChem published by Wiley-VCH GmbH.)- Published
- 2024
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30. Manganese-catalyzed Efficient Synthesis of N-heterocycles and Aminoketones Using Glycerol as a C3 Synthon.
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Wei Z, Ke Z, Wang Y, and Liu Q
- Abstract
Glycerol is one of the important biomass-derived feedstocks and the high-value utilizations of glycerol have attracted much attentions in recent years. Herein, we report a manganese catalyzed dehydrogenative coupling of glycerol with amines for the synthesis of substituted 2-methylquinoxalines, 2-ethylbenzimidazoles, and α-aminoketones without any external oxidant. In these reactions, NHC-based pincer manganese complex featuring a pyridine backbone displayed high catalytic activity and selectivity, in which hydrogen and water were produced as the only by-products using glycerol as a C3 synthon., (© 2024 Wiley-VCH GmbH.)
- Published
- 2024
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31. Novel Benzotriazole-β-lactam Derivatives as Antimalarial Agents: Design, Synthesis, Biological Evaluation and Molecular Docking Studies.
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Aye M, Jarrahpour A, Haghighijoo Z, Heiran R, Pournejati R, Karbalaei-Heidari HR, Sinou V, Brunel JM, Akkurt M, Özdemir N, and Turos E
- Subjects
- Humans, Molecular Docking Simulation, beta-Lactams pharmacology, beta-Lactams chemistry, Spectroscopy, Fourier Transform Infrared, Triazoles chemistry, Acetates, Structure-Activity Relationship, Antimalarials chemistry, Malaria
- Abstract
Many people around the world suffer from malaria, especially in tropical or subtropical regions. While malaria medications have shown success in treating malaria, there is still a problem with resistance to these drugs. Herein, we designed and synthesized some structurally novel benzotriazole-β-lactams using 2-(1H-benzo[d][1,2,3]triazol-1-yl)acetic acid as a key intermediate. To synthesize the target molecules, the ketene-imine cycloaddition reaction was employed. First, The reaction of 1H-benzo[d][1,2,3]triazole with 2-bromoacetic acid in aqueous sodium hydroxide yielded 2-(1H-benzo[d][1,2,3]triazol-1-yl)acetic acid. Then, the treatment of 2-(1H-benzo[d][1,2,3]triazol-1-yl)acetic acid with tosyl chloride, triethyl amine, and Schiff base provided new β-lactams in good to moderate yields.The formation of all cycloadducts was confirmed by elemental analysis, FT-IR, NMR and mass spectral data. Moreover, X-ray crystallography was used to determine the relative stereochemistry of 4a compound. The in vitro antimalarial activity test was conducted for each compound against P. falciparum K1. The IC
50 values ranged from 5.56 to 25.65 μM. A cytotoxicity profile of the compounds at 200 μM final concentration revealed suitable selectivity of the compounds for malaria treatment. Furthermore, the docking study was carried out for each compound into the P. falciparum dihydrofolate reductase enzyme (PfDHFR) binding site to analyze their possible binding orientation in the active site., (© 2024 Wiley-VHCA AG, Zurich, Switzerland.)- Published
- 2024
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32. Aza-Heterocyclic Building Blocks with In-Ring CF 2 -Fragment.
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Ryabukhin SV, Bondarenko DV, Trofymchuk SA, Lega DA, and Volochnyuk DM
- Abstract
Modern organic chemistry is a titan supporting and reinforcing pharmaceutical, agricultural, food and material science products. Over the past decades, the organic compounds market has been evolving to meet all the research demands. In this regard, medicinal chemistry is especially dependent on available chemical space as subtle tuning of the molecule structure is required to create a drug with relevant physicochemical properties and a remarkable activity profile. The recent rapid evolution of synthetic methodology to deploy fluorine has brought fluorinated compounds to the spotlight of MedChem community. And now unique properties of fluorine still keep fascinating more and more as its justified installation into a molecular framework has a beneficial impact on membrane permeability, lipophilicity, metabolic stability, pharmacokinetic properties, conformation, pK
a , etc. The backward influence of medicinal chemistry on organic synthesis has also changed the landscape of the latter towards new fluorinated topologies as well. Such complex relationships create a flexible and ever-changing ecosystem. Given that MedChem investigations strongly lean on the ability to reach suitable building blocks and the existence of reliable synthetic methods in this review we collected advances in the chemistry of respectful, but still enigmatic gem-difluorinated aza-heterocyclic building blocks., (© 2023 The Chemical Society of Japan & Wiley-VCH GmbH.)- Published
- 2024
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33. Dehydrogenative Electrochemical Synthesis of N-Aryl-3,4-Dihydroquinolin-2-ones by Iodine(III)-Mediated Coupling Reaction.
- Author
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Bieniek JC, Mashtakov B, Schollmeyer D, and Waldvogel SR
- Abstract
Electrochemically generated hypervalent iodine(III) species are powerful reagents for oxidative C-N coupling reactions, providing access to valuable N-heterocycles. A new electrocatalytic hypervalent iodine(III)-mediated in-cell synthesis of 1H-N-aryl-3,4-dihydroquinolin-2-ones by dehydrogenative C-N bond formation is presented. Catalytic amounts of the redox mediator, a low supporting electrolyte concentration and recycling of the solvent used make this method a sustainable alternative to electrochemical ex-cell or conventional approaches. Furthermore, inexpensive, readily available electrode materials and a simple galvanostatic set-up are applied. The broad functional group tolerance could be demonstrated by synthesizing 23 examples in yields up to 96 %, with one reaction being performed on a 10-fold higher scale. Based on the obtained results a sound reaction mechanism could be proposed., (© 2023 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH.)
- Published
- 2024
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34. Supporting Electrolyte-Free Electrochemical Oxidative C-H Sulfonylation and Thiocyanation of Fused Pyrimidin-4-Ones in an All-Green Electrolytic System.
- Author
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Biswas S, Ghosh S, and Das I
- Abstract
An electrooxidative C-H functionalization is a widely accepted route to obtain sulfur-containing arenes and heteroarenes. However, this process often involves using non-recyclable supporting electrolytes, (co)solvents like hexafluoroisopropanol, additives like acid, or catalysts. The use of additional reagents can increase costs and waste, reducing atom efficiency. Moreover, unlike other nitrogen-containing heterocycles, there have only been sporadic reports of electrochemical C-H functionalization in fused pyrimidin-4-ones, and an electrolyte-free process has yet to be developed. This work demonstrates that such anodic coupling reactions can be performed in an all-green electrolytic system without using such additional electrolytes or HFIP, maintaining a high atom economy. This C-H functionalization strategy utilizes inexpensive sodium sulfinates and ammonium thiocyanate as sulfonylating and thiocyanating agents in an undivided cell at a constant current, using a mixture of CH
3 CN/H2 O as solvent at room temperature. Thus, fused pyrimidin-4-ones can be selectively converted into C3-sulfonylated and -thiocyanated derivatives in moderate to good yields., (© 2023 Wiley-VCH GmbH.)- Published
- 2024
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35. Applications of Pyrrole and Pyridine-based Heterocycles in Cancer Diagnosis and Treatment.
- Author
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Tyagi R, Yadav K, Srivastava N, and Sagar R
- Subjects
- Humans, Heterocyclic Compounds chemistry, Heterocyclic Compounds pharmacology, Heterocyclic Compounds chemical synthesis, Animals, Neoplasms drug therapy, Neoplasms diagnosis, Antineoplastic Agents pharmacology, Antineoplastic Agents chemistry, Antineoplastic Agents chemical synthesis, Pyridines pharmacology, Pyridines chemistry, Pyridines chemical synthesis, Pyrroles chemistry, Pyrroles pharmacology, Pyrroles chemical synthesis
- Abstract
Background: The escalation of cancer worldwide is one of the major causes of economy burden and loss of human resources. According to the American Cancer Society, there will be 1,958,310 new cancer cases and 609,820 projected cancer deaths in 2023 in the United States. It is projected that by 2040, the burden of global cancer is expected to rise to 29.5 million per year, causing a death toll of 16.4 million. The hemostasis regulation by cellular protein synthesis and their targeted degradation is required for normal cell growth. The imbalance in hemostasis causes unbridled growth in cells and results in cancer. The DNA of cells needs to be targeted by chemotherapeutic agents for cancer treatment, but at the same time, their efficacy and toxicity also need to be considered for successful treatment., Objective: The objective of this study is to review the published work on pyrrole and pyridine, which have been prominent in the diagnosis and possess anticancer activity, to obtain some novel lead molecules of improved cancer therapeutic., Methods: A literature search was carried out using different search engines, like Sci-finder, Elsevier, ScienceDirect, RSC etc., for small molecules based on pyrrole and pyridine helpful in diagnosis and inducing apoptosis in cancer cells. The research findings on the application of these compounds from 2018-2023 were reviewed on a variety of cell lines, such as breast cancer, liver cancer, epithelial cancer, etc. Results: In this review, the published small molecules, pyrrole and pyridine and their derivatives, which have roles in the diagnosis and treatment of cancers, were discussed to provide some insight into the structural features responsible for diagnosis and treatment. The analogues with the chromeno-furo-pyridine skeleton showed the highest anticancer activity against breast cancer. The compound 5-amino-N-(1-(pyridin-4- yl)ethylidene)-1H-pyrazole-4-carbohydrazides was highly potent against HEPG2 cancer cell. Redaporfin is used for the treatment of cholangiocarcinoma, biliary tract cancer, cisplatin-resistant head and neck squamous cell carcinoma, and pigmentation melanoma, and it is in clinical trials for phase II. These structural features present a high potential for designing novel anticancer agents for diagnosis and drug development., Conclusion: Therefore, the N- and C-substituted pyrrole and pyridine-based novel privileged small Nheterocyclic scaffolds are potential molecules used in the diagnosis and treatment of cancer. This review discusses the reports on the synthesis of such molecules during 2018-2023. The review mainly discusses various diagnostic techniques for cancer, which employ pyrrole and pyridine heterocyclic scaffolds. Furthermore, the anticancer activity of N- and C-substituted pyrrole and pyridine-based scaffolds has been described, which works against different cancer cell lines, such as MCF-7, A549, A2780, HepG2, MDA-MB-231, K562, HT- 29, Caco-2 cells, Hela, Huh-7, WSU-DLCL2, HCT-116, HBL-100, H23, HCC827, SKOV3, etc. This review will help the researchers to obtain a critical insight into the structural aspects of pyrrole and pyridine-based scaffolds useful in cancer diagnosis as well as treatment and design pathways to develop novel drugs in the future., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2024
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36. Aldiminium and 1,2,3-triazolium dithiocarboxylate zwitterions derived from cyclic (alkyl)(amino) and mesoionic carbenes.
- Author
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Touj N, Mazars F, Zaragoza G, and Delaude L
- Abstract
The synthesis of zwitterionic dithiocarboxylate adducts was achieved by deprotonating various aldiminium or 1,2,3-triazolium salts with a strong base, followed by the nucleophilic addition of the in situ-generated cyclic (alkyl)(amino) or mesoionic carbenes (CAACs or MICs) onto carbon disulfide. Nine novel compounds were isolated and fully characterized by
1 H and13 C NMR, FTIR, and HRMS techniques. Moreover, the molecular structures of two CAAC·CS2 and two MIC·CS2 betaines were determined by X-ray diffraction analysis. The analytical data recorded for all these adducts were compared with those reported previously for related NHC·CS2 betaines derived from imidazolinium or (benz)imidazolium salts. Due to the absence of electronic communication between the CS2 unit and the orthogonal heterocycle, all the CAAC·CS2 , MIC·CS2 , and NHC·CS2 zwitterions displayed similar electronic properties and featured the same bite angle. Yet, their steric properties are liable to ample modifications by varying the exact nature of their cationic heterocycle and its substituents., (Copyright © 2023, Touj et al.)- Published
- 2023
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37. Nitrogen Heterocycle Synthesis through Hydride Abstraction of Acyclic Carbamates and Related Species: Scope, Mechanism, Stereoselectivity, and Product Conformation Studies.
- Author
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Miller JL, Damodaran K, and Floreancig PE
- Abstract
Acyliminium ions and related species are potent electrophiles that can be quite valuable in the synthesis of nitrogen-containing molecules. This manuscript describes a protocol to form these intermediates through hydride abstractions of easily accessible allylic carbamates, amides, and sulfonamides that avoids the reversibility that is possible in classical condensation-based routes. These intermediates are used in the preparation of a range of nitrogen-containing heterocycles, and in many cases high levels of stereocontrol are observed. Specifically areas of investigation include the impact of chemical structure on oxidation efficiency, the geometry of the intermediate iminium ions, the impact of a substrate stereocenter on stereocontrol, and an examination of transition state geometry., (© 2023 Wiley-VCH GmbH.)
- Published
- 2023
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38. 1,2,4-Triazines and Calcium Carbide in the Catalyst-Free Synthesis of 2,3,6-Trisubstituted Pyridines and Their D-, 13 C-, and Doubly D 2 - 13 C 2 -Labeled Analogues.
- Author
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Voronin VV, Polynski MV, and Ledovskaya MS
- Abstract
A novel synthetic approach to 2,3,6-trisubstituted pyridines, their 4,5-dideuterated derivatives, 4,5-
13 C2 - and doubly-labeled D2 -13 C2 -pyridines has been developed using catalyst-free [4+2] cycloaddition of 1,2,4-triazines and in situ generated acetylene or labeled acetylene. Calcium carbide and water or deuterium oxide were used for the in situ generation of acetylene and dideuteroacetylene. Calcium carbide-13 C2 in the mixture with water or deuterium oxide was applied as13 C2 -acetylene and D2 -13 C2 -acetylene source., (© 2023 Wiley-VCH GmbH.)- Published
- 2023
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39. NMR "Finger Prints" of N-Heterocyclic Carbenes, DFT Analysis: Scopes and Limitations.
- Author
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Kondrashova SA and Latypov SK
- Abstract
The scopes and limitations of theoretical methods for estimating various NMR metrics of NHCs are considered on a wide range of model NHCs and their derivatives, using a number of computational approximations. On the whole, the most reliable, from the point of view of predictability and insusceptibility to additional effects, are
31 P/13 C NMR shifts of NHC-phosphinidene adducts and13 C CSs of carbenes themselves. The method based on the analysis of77 Se CS NHC-selenoureas has some limitations since the observed NMR parameters can also be modulated by exchange effects due to their formation with non-classical hydrogen bonds. As for HEP, since the delicate balance of electron distribution between Pd and two carbon centers can nonlinearly affect relativistic spin-orbit effects, the accuracy of the estimation of this metric may still be limited.13 C CSs of NHC-azolium salts do not seem to be reliable, since the observed values are strongly influenced by the effects of the exchange between different forms with counterions, which are difficult to estimate correctly.- Published
- 2023
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40. Creating a Defined Chirality in Amino Acids and Cyclic Dipeptides by Photochemical Deracemization.
- Author
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Großkopf J, Plaza M, Kutta RJ, Nuernberger P, and Bach T
- Abstract
2,5-Diketopiperazines are cyclic dipeptides displaying a wide range of applications. Their enantioselective preparation has now been found possible from the respective racemates by a photochemical deracemization (53 examples, 74 % to quantitative yield, 71-99 % ee). A chiral benzophenone catalyst in concert with irradiation at λ=366 nm enables to establish the configuration at the stereogenic carbon atom C6 at will. If other stereogenic centers are present in the diketopiperazines they remain unaffected and a stereochemical editing is possible at a single position. Consecutive reactions, including the conversion into N-aryl or N-alkyl amino acids or the reduction to piperazines, occur without compromising the newly created stereogenic center. Transient absorption spectroscopy revealed that the benzophenone catalyst processes one enantiomer of the 2,5-diketopiperazines preferentially and enables a reversible hydrogen atom transfer that is responsible for the deracemization process. The remarkably long lifetime of the protonated ketyl radical implies a yet unprecedented mode of action., (© 2023 The Authors. Angewandte Chemie International Edition published by Wiley-VCH GmbH.)
- Published
- 2023
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41. Condensation of Benzyl Carbamate with Glyoxal in Polar Protic and Aprotic Solvents.
- Author
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Paromov AE
- Abstract
The synthesis of substituted 2,4,6,8,10,12-hexaazaisowurtzitane via direct condensation is challenging. The selection of starting ammonia derivatives is very limited. The important step in developing alternative synthetic routes to these compounds is to investigate their formation process in detail. Here, we examined an acid-catalyzed condensation between benzyl carbamate and glyoxal in a ratio of 2:1 in a range of polar protic and aprotic solvents, and discovered a new process occurring during the cascade condensation of glyoxal with ammonia derivatives as well as discovered several processes hindering the formation of caged compounds. More specifically, a cyclic compound, N , N '-bis(carbobenzoxy)-3,6-diamino-1,4-dioxane-2,5-diol, was found to form at the early stage of condensation under low acidity conditions. The formation of this compound is governed by an easier condensation of alcohol groups compared to the amide ones. The condensation intermediates, N , N '-bis(carbobenzoxy)ethan-1,2-diol, N , N ', N ″-tris(carbobenzoxy)ethanol, and N , N ', N ″, N ‴-tetrakis(carbobenzoxy)ethan, were obtained at a higher acidity. A range of solvents were identified: those that react with benzyl carbamate, those that promote the progress of side processes, and those that promote precipitation of condensation intermediates. A few byproducts were isolated and identified. It was found that DMSO exhibits a strong deactivating ability, while CH
3 CN exhibits a strong activating ability towards the acid-catalyzed condensation process of benzyl carbamate with glyoxal.- Published
- 2023
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42. The Role of Five-Membered Heterocycles in the Molecular Structure of Antibacterial Drugs Used in Therapy.
- Author
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Rusu A, Moga IM, Uncu L, and Hancu G
- Abstract
Five-membered heterocycles are essential structural components in various antibacterial drugs; the physicochemical properties of a five-membered heterocycle can play a crucial role in determining the biological activity of an antibacterial drug. These properties can affect the drug's activity spectrum, potency, and pharmacokinetic and toxicological properties. Using scientific databases, we identified and discussed the antibacterials used in therapy, containing five-membered heterocycles in their molecular structure. The identified five-membered heterocycles used in antibacterial design contain one to four heteroatoms (nitrogen, oxygen, and sulfur). Antibacterials containing five-membered heterocycles were discussed, highlighting the biological properties imprinted by the targeted heterocycle. In some antibacterials, heterocycles with five atoms are pharmacophores responsible for their specific antibacterial activity. As pharmacophores, these heterocycles help design new medicinal molecules, improving their potency and selectivity and comprehending the structure-activity relationship of antibiotics. Unfortunately, particular heterocycles can also affect the drug's potential toxicity. The review extensively presents the most successful five-atom heterocycles used to design antibacterial essential medicines. Understanding and optimizing the intrinsic characteristics of a five-membered heterocycle can help the development of antibacterial drugs with improved activity, pharmacokinetic profile, and safety.
- Published
- 2023
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43. Lutidyl Radical Photoelectron Spectra Reveal Additive Substituent Effects on Benzyl Derivatives' Ionization Energy.
- Author
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Kanayama K, Fernholz C, Nakamura H, Maruta K, Bodi A, and Hemberger P
- Abstract
Understanding how isomerism influences photoelectron spectra helps in the assignment and analysis of reactive mixtures, especially for heterocycles with numerous isomers. Threshold photoelectron spectra of lutidyl radical isomers, i. e., benzyl derivatives with a nitrogen heteroatom and a methyl substituent, are recorded using vacuum ultraviolet synchrotron radiation. The radicals are produced by flash pyrolysis from aminomethyl methylpyridine precursors. Experimental ionization energies are determined to be 7.54, 7.50, and 7.45 eV for 2,4-, 2,6- and 3,5-lutidyl, respectively, in excellent agreement with composite method calculations. Franck-Condon simulations aid the TPES assignment but are also shown to exhibit artifacts if large-amplitude motions, notably the methyl internal rotation are assumed to be active in the double harmonic approximation. Based on calculated adiabatic ionization energies (AIE) of benzyl, picolyl, and xylyl radicals, the N and CH
3 substituent effects are found to be additive, position-dependent and decrease in the para>ortho≳meta order in magnitude with the nitrogen heteroatom increasing and the methyl substituent decreasing the AIE. These effects are discussed in light of the charge distribution upon ionization. The additivity of the substituent effects also helps predict the influence of substituents on the binding energy of the unpaired electron in analogous radicals., (© 2023 The Authors. ChemPhysChem published by Wiley-VCH GmbH.)- Published
- 2023
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44. Regioselective Synthesis of NO-Donor (4-Nitro-1,2,3-triazolyl)furoxans via Eliminative Azide-Olefin Cycloaddition.
- Author
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Stebletsova IA, Larin AA, Ananyev IV, and Fershtat LL
- Abstract
A facile and efficient method for the regioselective [3 + 2] cycloaddition of 4-azidofuroxans to 1-dimethylamino-2-nitroethylene under p -TSA catalysis affording (4-nitro-1,2,3-triazolyl)furoxans was developed. This transformation is believed to proceed via eliminative azide-olefin cycloaddition resulting in its complete regioselectivity. The developed protocol has a broad substrate scope and enables a straightforward assembly of the 4-nitro-1,2,3-triazole motif. Moreover, synthesized (4-nitro-1,2,3-triazolyl)furoxans were found to be capable of NO release in a broad range of concentrations, thus providing a novel platform for future drug design and related biomedical applications of heterocyclic NO donors.
- Published
- 2023
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45. Unlocking New Prenylation Modes: Azaindoles as a New Substrate Class for Indole Prenyltransferases.
- Author
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Gardner ED, Johnson BP, Dimas DA, McClurg HE, Severance ZC, Burgett AW, and Singh S
- Abstract
Aza-substitution, the replacement of aromatic CH groups with nitrogen atoms, is an established medicinal chemistry strategy for increasing solubility, but current methods of accessing functionalized azaindoles are limited. In this work, indole-alkylating aromatic prenyltransferases (PTs) were explored as a strategy to directly functionalize azaindole-substituted analogs of natural products. For this, a series of aza-l-tryptophans (Aza-Trp) featuring N -substitution of every aromatic CH position of the indole ring and their corresponding cyclic Aza-l-Trp-l-proline dipeptides (Aza-CyWP), were synthesized as substrate mimetics for the indole-alkylating PTs FgaPT2, CdpNPT, and FtmPT1. We then demonstrated most of these substrate analogs were accepted by a PT, and the regioselectivity of each prenylation was heavily influenced by the position of the N -substitution. Remarkably, FgaPT2 was found to produce cationic N -prenylpyridinium products, representing not only a new substrate class for indole PTs but also a previously unobserved prenylation mode. The discovery that nitrogenous indole bioisosteres can be accepted by PTs thus provides access to previously unavailable chemical space in the search for bioactive indolediketopiperazine analogs., Competing Interests: Conflicts There are no conflicts to declare.
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- 2023
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46. 2,2'-Biquinoline-Based Recyclable Electroauxiliaries for the Generation of Alkyl Radicals via C-C Bond Cleavage.
- Author
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Ratnam S, Unone S, and Janssen-Müller D
- Abstract
Alkyl radical precursors are essential for a wide variety of photocatalytic and 3d-metal-catalyzed C-C bond forming reactions. Neutral organic heterocycles as electroauxiliaries such as 4-alkyl Hantzsch esters have become reliable tools for alkyl radical formation. Here we show that 2,2'-biquinoline-derived alkyl-substituted dihydroquinolines act as competent radical precursors with the ability to form primary, secondary and tertiary alkyl radicals. Hydroalkylation of benzalmalononitriles and N-Boc protected diazenes has been achieved through copper catalysis under mild conditions of 50 °C with good to very good yields of up to 85 %. Furthermore, the dihydroquinolines' reactivity towards a denitrative alkylation of nitroolefins such as β-nitrostyrene was discovered. Most importantly, the released biquinoline can be recycled, which greatly improves the overall atom-economy of these alkyl radical precursors in comparison to previous N-heterocyclic electroauxiliaries., (© 2023 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH.)
- Published
- 2023
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47. Discovery of new imidazotetrazinones with potential to overcome tumor resistance.
- Author
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Summers HS, Lewis W, Williams HEL, Bradshaw TD, Moody CJ, and Stevens MFG
- Subjects
- Humans, Temozolomide pharmacology, Dacarbazine pharmacology, Dacarbazine therapeutic use, Cell Line, Tumor, Thiazoles pharmacology, Thiazoles therapeutic use, Antineoplastic Agents, Alkylating therapeutic use, Drug Resistance, Neoplasm, Antineoplastic Agents, Brain Neoplasms drug therapy, Glioblastoma drug therapy
- Abstract
We describe the design, organic synthesis, and characterization, including X-ray crystallography, of a series of novel analogues of the clinically used antitumor agent temozolomide, together with their in vitro biological evaluation. The work has resulted in the discovery of a new series of anticancer imidazotetrazines that offer the potential to overcome the resistance mounted by tumors against temozolomide. The rationally designed compounds that incorporate a propargyl alkylating moiety and a thiazole ring as isosteric replacement for a carboxamide, are readily synthesized (gram-scale), exhibit defined solid-state structures, and enhanced growth-inhibitory activity against human tumor cell lines, including MGMT-expressing and MMR-deficient lines, molecular features that confer tumor resistance. The cell proliferation data were confirmed by clonogenic cell survival assays, and DNA flow cytometry analysis was undertaken to determine the effects of new analogues on cell cycle progression. Detailed
1 H NMR spectroscopic studies showed that the new agents are stable in solution, and confirmed their mechanism of action. The propargyl and thiazole substituents significantly improve potency and physicochemical, drug metabolism and permeability properties, suggesting that the thiazole 13 should be prioritized for further preclinical evaluation., Competing Interests: Declaration of competing interest The authors declare no competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier Masson SAS.. All rights reserved.)- Published
- 2023
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48. Mono- and Difluorinated Saturated Heterocyclic Amines for Drug Discovery: Systematic Study of Their Physicochemical Properties.
- Author
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Melnykov KP, Nazar K, Smyrnov O, Skreminskyi A, Pavlenko S, Klymenko-Ulianov O, Shishkina S, Volochnyuk DM, and Grygorenko OO
- Subjects
- Chemical Phenomena, Molecular Conformation, Drug Discovery, Fluorine chemistry, Amines chemistry
- Abstract
A comprehensive study of physicochemical properties (pK
a , LogP, and intrinsic microsomal clearance) within the series of mono- and difluorinated azetidine, pyrrolidine, and piperidine derivatives was performed. While the number of fluorine atoms and their distance to the protonation center were the major factors defining the compound's basicity, both pKa and LogP values were affected considerably by the conformational preferences of the corresponding derivatives. For example, features of "Janus face" (facially polarized) cyclic compounds (i. e., unusually high hydrophilicity) were identified for cis-3,5-difluoropiperidine, preferring a diaxial conformation. Intrinsic microsomal clearance measurements demonstrated high metabolic stability of the compounds studied (with a single exception of the 3,3-difluoroazetidine derivative). According to pKa - LogP plots, the title compounds provide a valuable extension of the fluorine-containing (e. g., fluoroalkyl-substituted) saturated heterocyclic amine series as building blocks for rational optimization studies in early drug discovery., (© 2023 Wiley-VCH GmbH.)- Published
- 2023
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49. Proteomic Profiling of Paracoccidioides brasiliensis in Response to Phenacylideneoxindol Derivative: Unveiling Molecular Targets and Pathways.
- Author
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Silva LDC, Rocha OB, Portis IG, Santos TG, Freitas E Silva KS, Santos Filho RFD, Cunha S, Alonso A, Soares CMA, and Pereira M
- Abstract
Background: The treatment of paracoccidioidomycosis (PCM) is a challenge, and the discovery of new antifungal compounds is crucial. The phenacylideneoxindoles exhibited promising antifungal activity against Paracoccidioides spp., but their mode of action remains unknown., Methods: Through proteomic analysis, we investigated the effects of (E)-3-(2-oxo-2-phenylethylidene)indolin-2-one on P. brasiliensis . In addition, we investigated the metabolic alterations of P. brasiliensis in response to the compound. Furthermore, the effects of the compound on the membrane, ethanol production, and reactive oxygen species (ROS) production were verified., Results: We identified differentially regulated proteins that revealed significant metabolic reorganization, including an increase in ethanol production, suggesting the activation of alcoholic fermentation and alterations in the rigidity of fungal cell membrane with an increase of the ergosterol content and formation of ROS., Conclusions: These findings enhance our understanding of the mode of action and response of P. brasiliensis to the investigated promising antifungal compound, emphasizing its potential as a candidate for the treatment of PCM.
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- 2023
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50. Semicarbazides Carrying Indole Core: Synthesis, Cytotoxicity Evaluation against Human Breast Cancer Cell Lines, and Molecular Modeling Studies.
- Author
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Çelik B, Buran Uğur S, Baran M, Gündüz MG, Keskin S, Önder GÖ, Bitgen N, Kaya S, and Doğan ŞD
- Subjects
- Female, Humans, Cell Line, Cell Line, Tumor, Cell Proliferation, Drug Screening Assays, Antitumor, Molecular Docking Simulation, Molecular Structure, Semicarbazides pharmacology, Structure-Activity Relationship, Antineoplastic Agents chemistry, Breast Neoplasms drug therapy, Indoles chemical synthesis, Indoles pharmacology, Carboxylic Acids chemical synthesis, Carboxylic Acids pharmacology
- Abstract
In this article, we report the synthesis and cytotoxicity evaluation of novel indole-carrying semicarbazide derivatives (IS1-IS15). The target molecules were obtained by the reaction of aryl/alkyl isocyanates with 1H-indole-2-carbohydrazide that was in-house synthesized from 1H-indole-2-carboxylic acid. Following structural characterization by
1 H-NMR,13 C-NMR, and HR-MS, IS1-IS15 were investigated for their cytotoxic activity against human breast cancer cell lines, MCF-7 and MDA-MB-231. According to the data obtained from the MTT assay, phenyl ring with a lipophilic group at its para-position and alkyl moiety were preferential substituents on the indole-semicarbazide scaffold for antiproliferative activity. The effect of IS12 (N-(4-chloro-3-(trifluoromethyl)phenyl)-2-(1H-indole-2-carbonyl)hydrazine-1-carboxamide), the compound that demonstrated remarkable antiproliferative activity on both cell lines, was also evaluated on the apoptotic pathway. Moreover, the calculation of critical descriptors constituting drug-likeness confirmed the position of the selected compounds in the anticancer drug development process. Finally, molecular docking studies suggested the inhibition of tubulin polymerization as the potential activity mechanism of this class of molecules., (© 2023 Wiley-VHCA AG, Zurich, Switzerland.)- Published
- 2023
- Full Text
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