28 results on '"Savran, D"'
Search Results
2. Meningiomas: Sex-Specific Differences and Prognostic Implications of a Chromosome X Loss.
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Berghaus N, Hielscher T, Savran D, Schrimpf D, Maas SLN, Preusser M, Weller M, Acker T, Herold-Mende C, Wick W, von Deimling A, and Sahm F
- Abstract
Background: Meningiomas are the most common primary intracranial tumours in adults. Several studies proposed new stratification systems with a more accurate risk prediction than the WHO grading, e.g. based on methylation and copy number variations (CNVs). Yet, common shortcomings in these analyses are either a lack of stratification by sex of patients or excluding the gonososmes from CNV assessment., Methods: Within this study, DNA methylation array data from 7,424 meningioma samples as well as targeted sequencing, clinical annotations and morphology subtyping of 796 samples were examined for differences between females and males regarding mutations, methylation classes, copy number variations and histology., Results: Meningiomas from females accounted for about 53 % of the malignant tumours and present a loss of one X chromosome in 57 % of these malignant cases. In the group of benign tumours, females comprised about 75 % of the patients. Therein, a loss of one X chromosome was detected in only about 10 % of the cases but was associated with a significantly worse progression free survival., Conclusion: Although genomic instability is a common feature of malignant meningiomas, particularly loss of the X chromosome in tumours of female patients in otherwise histologically and molecularly low-risk tumours confers higher risk. Hence, the gonosomal copy number status can be leveraged for increased diagnostic accuracy., (© The Author(s) 2024. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
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- 2024
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3. Cryo-EM Structure of the Full-length hnRNPA1 Amyloid Fibril.
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Sharma K, Banerjee S, Savran D, Rajes C, Wiese S, Girdhar A, Schwierz N, Lee C, Shorter J, Schmidt M, Guo L, and Fändrich M
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- Cryoelectron Microscopy methods, Mutation, Prions chemistry, Protein Domains, Amyloid chemistry, Heterogeneous Nuclear Ribonucleoprotein A1 chemistry
- Abstract
Heterogeneous nuclear ribonucleoprotein A1 (hnRNPA1) is a multifunctional RNA-binding protein that is associated with neurodegenerative diseases, such as amyotrophic lateral sclerosis and multisystem proteinopathy. In this study, we have used cryo-electron microscopy to investigate the three-dimensional structure of amyloid fibrils from full-length hnRNPA1 protein. We find that the fibril core is formed by a 45-residue segment of the prion-like low-complexity domain of the protein, whereas the remaining parts of the protein (275 residues) form a fuzzy coat around the fibril core. The fibril consists of two fibril protein stacks that are arranged into a pseudo-2
1 screw symmetry. The ordered core harbors several of the positions that are known to be affected by disease-associated mutations, but does not encompass the most aggregation-prone segments of the protein. These data indicate that the structures of amyloid fibrils from full-length proteins may be more complex than anticipated by current theories on protein misfolding., Competing Interests: Declaration of Competing Interest All authors except J.S. declare no conflict of interest. J.S. is a consultant for Dewpoint Therapeutics, ADRx, and Neumora. J.S. is an advisor and shareholder for Confluence Therapeutics., (Copyright © 2023 Elsevier Ltd. All rights reserved.)- Published
- 2023
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4. Packed red blood cell transfusion in preterm infants.
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Bellach L, Eigenschink M, Hassanein A, Savran D, Salzer U, Müllner EW, Repa A, Klebermass-Schrehof K, Wisgrill L, Giordano V, and Berger A
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- Erythrocyte Transfusion adverse effects, Humans, Infant, Infant, Low Birth Weight, Infant, Newborn, Infant, Premature, Anemia, Neonatal complications, Anemia, Neonatal prevention & control, Enterocolitis, Necrotizing prevention & control, Enterocolitis, Necrotizing therapy
- Abstract
Premature infants commonly receive adult packed red blood cells (pRBCs) during their hospital stay. As adult erythrocytes differ substantially from those of preterm infants, transfusion of adult pRBCs into preterm infants can be considered inappropriate for the physiology of a preterm infant. An absence of standardisation of transfusion protocols makes it difficult to compare and interpret pertinent clinical data, as reflected by unclear associations between pRBC transfusion and complications related to prematurity, such as bronchopulmonary dysplasia, neurodevelopmental impairment, retinopathy of prematurity, or necrotising enterocolitis. The difficulty in interpreting clinical data is further increased by differences in study designs that either overestimate pRBC-associated complications of prematurity or have not yet been designed to directly link pRBC transfusions to their respective complications. Thus, neonatal transfusion practice has become an ongoing difficulty, in which differences in transfusion guidelines hinder the ability to generate comparable clinical data, and heterogeneity in clinical data prevents the implementation of standardised transfusion protocols. To overcome these issues, novel approaches with biochemical-clinical translational designs could enable clinicians to gather causal evidence instead of circumstantial correlation., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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5. SAA fibrils involved in AA amyloidosis are similar in bulk and by single particle reconstitution: A MAS solid-state NMR study.
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Sundaria A, Liberta F, Savran D, Sarkar R, Rodina N, Peters C, Schwierz N, Haupt C, Schmidt M, and Reif B
- Abstract
AA amyloidosis is one of the most prevalent forms of systemic amyloidosis and affects both humans and other vertebrates. In this study, we compare MAS solid-state NMR data with a recent cryo-EM study of fibrils involving full-length murine SAA1.1. We address the question whether the specific requirements for the reconstitution of an amyloid fibril structure by cryo-EM can potentially yield a bias towards a particular fibril polymorph. We employ fibril seeds extracted from in to vivo material to imprint the fibril structure onto the biochemically produced protein. Sequential assignments yield the secondary structure elements in the fibril state. Long-range DARR and PAR experiments confirm largely the topology observed in the ex-vivo cryo-EM study. We find that the β-sheets identified in the NMR experiments are similar to the β-sheets found in the cryo-EM study, with the exception of amino acids 33-42. These residues cannot be assigned by solid-state NMR, while they adopt a stable β-sheet in the cryo-EM structure. We suggest that the differences between MAS solid-state NMR and cryo-EM data are a consequence of a second conformer involving residues 33-42. Moreover, we were able to characterize the dynamic C-terminal tail of SAA in the fibril state. The C-terminus is flexible, remains detached from the fibrils, and does not affect the SAA fibril structure as confirmed further by molecular dynamics simulations. As the C-terminus can potentially interact with other cellular components, binding to cellular targets can affect its accessibility for protease digestion., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2022 The Authors.)
- Published
- 2022
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6. Cryo-EM demonstrates the in vitro proliferation of an ex vivo amyloid fibril morphology by seeding.
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Heerde T, Rennegarbe M, Biedermann A, Savran D, Pfeiffer PB, Hitzenberger M, Baur J, Puscalau-Girtu I, Zacharias M, Schwierz N, Haupt C, Schmidt M, and Fändrich M
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- Amyloidosis genetics, Amyloidosis pathology, Animals, Cloning, Molecular, Cryoelectron Microscopy, Endopeptidase K chemistry, Escherichia coli genetics, Escherichia coli metabolism, Gene Expression, Genetic Vectors chemistry, Genetic Vectors metabolism, Humans, Mice, Mice, Transgenic, Molecular Dynamics Simulation, Protein Conformation, Protein Isoforms chemistry, Protein Isoforms genetics, Protein Isoforms metabolism, Protein Stability, Proteolysis, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Serum Amyloid A Protein genetics, Serum Amyloid A Protein metabolism, Amyloid chemistry, Serum Amyloid A Protein chemistry
- Abstract
Several studies showed that seeding of solutions of monomeric fibril proteins with ex vivo amyloid fibrils accelerated the kinetics of fibril formation in vitro but did not necessarily replicate the seed structure. In this research we use cryo-electron microscopy and other methods to analyze the ability of serum amyloid A (SAA)1.1-derived amyloid fibrils, purified from systemic AA amyloidosis tissue, to seed solutions of recombinant SAA1.1 protein. We show that 98% of the seeded fibrils remodel the full fibril structure of the main ex vivo fibril morphology, which we used for seeding, while they are notably different from unseeded in vitro fibrils. The seeded fibrils show a similar proteinase K resistance as ex vivo fibrils and are substantially more stable to proteolytic digestion than unseeded in vitro fibrils. Our data support the view that the fibril morphology contributes to determining proteolytic stability and that pathogenic amyloid fibrils arise from proteolytic selection., (© 2022. The Author(s).)
- Published
- 2022
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7. Redox Properties of Human Erythrocytes Are Adapted for Vitamin C Recycling.
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Eigenschink M, Savran D, Zitterer CP, Granitzer S, Fritz M, Baron DM, Müllner EW, and Salzer U
- Abstract
Ascorbic acid (AA; or vitamin C) is an important physiological antioxidant and radical scavenger. Some mammalian species, including homo sapiens , have lost the ability to synthetize AA and depend on its nutritional uptake. Erythrocytes from AA-auxotroph mammals express high amounts of the glucose transporter GLUT1. This isoform enables rapid uptake of glucose as well as dehydroascorbate (DHA), the fully oxidized form of AA. Here, we explored the effects of DHA uptake on the redox metabolism of human erythrocytes. DHA uptake enhanced plasma membrane electron transport (PMET) activity. This process is mediated by DCytb, a membrane bound cytochrome catalyzing extracellular reduction of Fe
3+ and ascorbate free radical (AFR), the first oxidized form of AA. DHA uptake also decreased cellular radical oxygen species (ROS) levels. Both effects were massively enhanced in the presence of physiological glucose concentrations. Reduction of DHA to AA largely depleted intracellular glutathione (GSH) and induced the efflux of its oxidized form, GSSG. GSSG efflux could be inhibited by MK-571 ( IC50 = 5 μM), indicating involvement of multidrug resistance associated protein (MRP1/4). DHA-dependent GSH depletion and GSSG efflux were completely rescued in the presence of 5 mM glucose and, partially, by 2-deoxy-glucose (2-DG), respectively. These findings indicate that human erythrocytes are physiologically adapted to recycle AA both intracellularly via GLUT1-mediated DHA uptake and reduction and extracellularly via DCytb-mediated AFR reduction. We discuss the possibility that this improved erythrocyte-mediated AA recycling was a prerequisite for the emergence of AA auxotrophy which independently occurred at least twice during mammalian evolution., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Eigenschink, Savran, Zitterer, Granitzer, Fritz, Baron, Müllner and Salzer.)- Published
- 2021
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8. Role of Chiral Two-Body Currents in ^{6}Li Magnetic Properties in Light of a New Precision Measurement with the Relative Self-Absorption Technique.
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Friman-Gayer U, Romig C, Hüther T, Albe K, Bacca S, Beck T, Berger M, Birkhan J, Hebeler K, Hernandez OJ, Isaak J, König S, Pietralla N, Ries PC, Rohrer J, Roth R, Savran D, Scheck M, Schwenk A, Seutin R, and Werner V
- Abstract
A direct measurement of the decay width of the excited 0_{1}^{+} state of ^{6}Li using the relative self-absorption technique is reported. Our value of Γ_{γ,0_{1}^{+}→1_{1}^{+}}=8.17(14)_{stat.}(11)_{syst.} eV provides sufficiently low experimental uncertainties to test modern theories of nuclear forces. The corresponding transition rate is compared to the results of ab initio calculations based on chiral effective field theory that take into account contributions to the magnetic dipole operator beyond leading order. This enables a precision test of the impact of two-body currents that enter at next-to-leading order.
- Published
- 2021
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9. ΔK=0 M1 Excitation Strength of the Well-Deformed Nucleus ^{164}Dy from K Mixing.
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Beck T, Werner V, Pietralla N, Bhike M, Cooper N, Friman-Gayer U, Isaak J, Jolos RV, Kleemann J, Krishichayan, Papst O, Tornow W, Bernards C, Crider BP, Ilieva RS, Löher B, Mihai C, Naqvi F, Pascu S, Peters EE, Prados-Estevez FM, Ross TJ, Savran D, Vanhoy JR, and Zilges A
- Abstract
The size of a ΔK=0 M1 excitation strength has been determined for the first time in a predominantly axially deformed even-even nucleus. It has been obtained from the observation of a rare K-mixing situation between two close-lying J^{π}=1^{+} states of the nucleus ^{164}Dy with components characterized by intrinsic projection quantum numbers K=0 and K=1. Nuclear resonance fluorescence induced by quasimonochromatic linearly polarized γ-ray beams provided evidence for K mixing of the 1^{+} states at 3159.1(3) and 3173.6(3) keV in excitation energy from their γ-decay branching ratios into the ground-state band. The ΔK=0 transition strength of B(M1;0_{1}^{+}→1_{K=0}^{+})=0.008(1)μ_{N}^{2} was inferred from a mixing analysis of their M1 transition rates into the ground-state band. It is in agreement with predictions from the quasiparticle phonon nuclear model. This determination represents first experimental information on the M1 excitation strength of a nuclear quantum state with a negative R-symmetry quantum number.
- Published
- 2020
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10. Fragmentation of Single-Particle Strength around the Doubly Magic Nucleus ^{132}Sn and the Position of the 0f_{5/2} Proton-Hole State in ^{131}In.
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Vaquero V, Jungclaus A, Aumann T, Tscheuschner J, Litvinova EV, Tostevin JA, Baba H, Ahn DS, Avigo R, Boretzky K, Bracco A, Caesar C, Camera F, Chen S, Derya V, Doornenbal P, Endres J, Fukuda N, Garg U, Giaz A, Harakeh MN, Heil M, Horvat A, Ieki K, Imai N, Inabe N, Kalantar-Nayestanaki N, Kobayashi N, Kondo Y, Koyama S, Kubo T, Martel I, Matsushita M, Million B, Motobayashi T, Nakamura T, Nakatsuka N, Nishimura M, Nishimura S, Ota S, Otsu H, Ozaki T, Petri M, Reifarth R, Rodríguez-Sánchez JL, Rossi D, Saito AT, Sakurai H, Savran D, Scheit H, Schindler F, Schrock P, Semmler D, Shiga Y, Shikata M, Shimizu Y, Simon H, Steppenbeck D, Suzuki H, Sumikama T, Symochko D, Syndikus I, Takeda H, Takeuchi S, Taniuchi R, Togano Y, Tsubota J, Wang H, Wieland O, Yoneda K, Zenihiro J, and Zilges A
- Abstract
Spectroscopic factors of neutron-hole and proton-hole states in ^{131}Sn and ^{131}In, respectively, were measured using one-nucleon removal reactions from doubly magic ^{132}Sn at relativistic energies. For ^{131}In, a 2910(50)-keV γ ray was observed for the first time and tentatively assigned to a decay from a 5/2^{-} state at 3275(50) keV to the known 1/2^{-} level at 365 keV. The spectroscopic factors determined for this new excited state and three other single-hole states provide first evidence for a strong fragmentation of single-hole strength in ^{131}Sn and ^{131}In. The experimental results are compared to theoretical calculations based on the relativistic particle-vibration coupling model and to experimental information for single-hole states in the stable doubly magic nucleus ^{208}Pb.
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- 2020
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11. Approaching the Gamow Window with Stored Ions: Direct Measurement of ^{124}Xe(p,γ) in the ESR Storage Ring.
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Glorius J, Langer C, Slavkovská Z, Bott L, Brandau C, Brückner B, Blaum K, Chen X, Dababneh S, Davinson T, Erbacher P, Fiebiger S, Gaßner T, Göbel K, Groothuis M, Gumberidze A, Gyürky G, Heil M, Hess R, Hensch R, Hillmann P, Hillenbrand PM, Hinrichs O, Jurado B, Kausch T, Khodaparast A, Kisselbach T, Klapper N, Kozhuharov C, Kurtulgil D, Lane G, Lederer-Woods C, Lestinsky M, Litvinov S, Litvinov YA, Löher B, Nolden F, Petridis N, Popp U, Rauscher T, Reed M, Reifarth R, Sanjari MS, Savran D, Simon H, Spillmann U, Steck M, Stöhlker T, Stumm J, Surzhykov A, Szücs T, Nguyen TT, Taremi Zadeh A, Thomas B, Torilov SY, Törnqvist H, Träger M, Trageser C, Trotsenko S, Varga L, Volknandt M, Weick H, Weigand M, Wolf C, Woods PJ, and Xing YM
- Abstract
We report the first measurement of low-energy proton-capture cross sections of ^{124}Xe in a heavy-ion storage ring. ^{124}Xe^{54+} ions of five different beam energies between 5.5 and 8 AMeV were stored to collide with a windowless hydrogen target. The ^{125}Cs reaction products were directly detected. The interaction energies are located on the high energy tail of the Gamow window for hot, explosive scenarios such as supernovae and x-ray binaries. The results serve as an important test of predicted astrophysical reaction rates in this mass range. Good agreement in the prediction of the astrophysically important proton width at low energy is found, with only a 30% difference between measurement and theory. Larger deviations are found above the neutron emission threshold, where also neutron and γ widths significantly impact the cross sections. The newly established experimental method is a very powerful tool to investigate nuclear reactions on rare ion beams at low center-of-mass energies.
- Published
- 2019
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12. Modelling survival of Salmonella Enteritidis during storage of yoghurt at different temperatures.
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Savran D, Pérez-Rodríguez F, and Kadir Halkman A
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- Cold Temperature, Colony Count, Microbial, Food Microbiology, Salmonella enteritidis metabolism, Food Storage methods, Salmonella enteritidis growth & development, Yogurt microbiology
- Abstract
The aim of this study was to evaluate the behaviour of Salmonella Enteritidis during the storage of yoghurt at different temperatures (4, 12, 20, and 25 °C), and to develop mathematical models to predict the behaviour of this bacterium as a function of storage temperature. Results indicated that Salmonella was able to survive longer during storage when temperature was low (e.g. 304 h at 4 °C, 60 h at 25 °C). The Geeraerd model with log-decrease and tailing was selected as the most suitable model to describe survival. To evaluate the effect of storage temperature on kinetic parameters such as death rate (k
max ) secondary models were developed. The kmax was maximum at 25 °C and minimum at 4 °C with kmax = 0.28 and 0.039 h-1 , respectively. The residual population (Nres ) ranged 0.5 and 1.8 log CFU/g but there was no temperature dependency of this parameter. A probabilistic example was conduced based on the developed model to assess the exposure to Salmonella by consumption of traditional Turkish yoghurt., (Copyright © 2018 Elsevier B.V. All rights reserved.)- Published
- 2018
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13. Strong Neutron Pairing in core+4n Nuclei.
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Revel A, Marqués FM, Sorlin O, Aumann T, Caesar C, Holl M, Panin V, Vandebrouck M, Wamers F, Alvarez-Pol H, Atar L, Avdeichikov V, Beceiro-Novo S, Bemmerer D, Benlliure J, Bertulani CA, Boillos JM, Boretzky K, Borge MJG, Caamaño M, Casarejos E, Catford WN, Cederkäll J, Chartier M, Chulkov L, Cortina-Gil D, Cravo E, Crespo R, Datta Pramanik U, Díaz Fernández P, Dillmann I, Elekes Z, Enders J, Ershova O, Estradé A, Farinon F, Fraile LM, Freer M, Galaviz D, Geissel H, Gernhäuser R, Golubev P, Göbel K, Hagdahl J, Heftrich T, Heil M, Heine M, Heinz A, Henriques A, Ignatov A, Johansson HT, Jonson B, Kahlbow J, Kalantar-Nayestanaki N, Kanungo R, Kelic-Heil A, Knyazev A, Kröll T, Kurz N, Labiche M, Langer C, Le Bleis T, Lemmon R, Lindberg S, Machado J, Marganiec J, Movsesyan A, Nacher E, Najafi M, Nilsson T, Nociforo C, Paschalis S, Perea A, Petri M, Pietri S, Plag R, Reifarth R, Ribeiro G, Rigollet C, Röder M, Rossi D, Savran D, Scheit H, Simon H, Syndikus I, Taylor JT, Tengblad O, Thies R, Togano Y, Velho P, Volkov V, Wagner A, Weick H, Wheldon C, Wilson G, Winfield JS, Woods P, Yakorev D, Zhukov M, Zilges A, and Zuber K
- Abstract
The emission of neutron pairs from the neutron-rich N=12 isotones ^{18}C and ^{20}O has been studied by high-energy nucleon knockout from ^{19}N and ^{21}O secondary beams, populating unbound states of the two isotones up to 15 MeV above their two-neutron emission thresholds. The analysis of triple fragment-n-n correlations shows that the decay ^{19}N(-1p)^{18}C^{*}→^{16}C+n+n is clearly dominated by direct pair emission. The two-neutron correlation strength, the largest ever observed, suggests the predominance of a ^{14}C core surrounded by four valence neutrons arranged in strongly correlated pairs. On the other hand, a significant competition of a sequential branch is found in the decay ^{21}O(-1n)^{20}O^{*}→^{18}O+n+n, attributed to its formation through the knockout of a deeply bound neutron that breaks the ^{16}O core and reduces the number of pairs.
- Published
- 2018
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14. Modeling the survival of Salmonella Enteritidis and Salmonella Typhimurium during the fermentation of yogurt.
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Savran D, Pérez-Rodríguez F, and Halkman AK
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- Bacterial Load, Fermentation, Food Contamination, Humans, Microbial Viability, Risk, Risk Assessment, Salmonella Food Poisoning epidemiology, Salmonella Food Poisoning etiology, Salmonella Food Poisoning microbiology, Salmonella enteritidis isolation & purification, Salmonella enteritidis metabolism, Salmonella typhimurium isolation & purification, Salmonella typhimurium metabolism, Species Specificity, Turkey epidemiology, Yogurt adverse effects, Yogurt analysis, Models, Biological, Salmonella enteritidis growth & development, Salmonella typhimurium growth & development, Yogurt microbiology
- Abstract
The objective of this study was to evaluate the behavior of Salmonella Enteritidis and Salmonella Typhimurium, the two most important serovars of salmonellosis , during the fermentation of yogurt. The microorganisms were enumerated in milk throughout the fermentation process at three initial inoculum levels (3, 5 and 7 log CFU/mL). DMFit software was used in the fitting procedure of the data (IFR, Norwich, UK, Version 3.5). The data provided sigmoidal curves that were successfully displayed with the Baranyi model. The results showed that the initial inoculum level did not affect the growth for both pathogens; thus, the µ
max values (maximum specific growth rate) did not significantly differ across all the contamination levels, ranging from 0.26 to 0.38 for S. Enteritidis and from 0.50 to 0.56 log CFU/g/h for S. Typhimurium ( P > 0.05). However, the µmax values significantly differed between the two serovars ( P < 0.05). The λ values (lag time) did not have a clear trend in either of the pathogens. The present study showed that Salmonella can survive the fermentation process of milk even at a low contamination level. In addition, the models presented in this study can be used in quantitative risk assessment studies to estimate the threat to consumers.- Published
- 2018
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15. Quasifree (p, 2p) Reactions on Oxygen Isotopes: Observation of Isospin Independence of the Reduced Single-Particle Strength.
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Atar L, Paschalis S, Barbieri C, Bertulani CA, Díaz Fernández P, Holl M, Najafi MA, Panin V, Alvarez-Pol H, Aumann T, Avdeichikov V, Beceiro-Novo S, Bemmerer D, Benlliure J, Boillos JM, Boretzky K, Borge MJG, Caamaño M, Caesar C, Casarejos E, Catford W, Cederkall J, Chartier M, Chulkov L, Cortina-Gil D, Cravo E, Crespo R, Dillmann I, Elekes Z, Enders J, Ershova O, Estrade A, Farinon F, Fraile LM, Freer M, Galaviz Redondo D, Geissel H, Gernhäuser R, Golubev P, Göbel K, Hagdahl J, Heftrich T, Heil M, Heine M, Heinz A, Henriques A, Hufnagel A, Ignatov A, Johansson HT, Jonson B, Kahlbow J, Kalantar-Nayestanaki N, Kanungo R, Kelic-Heil A, Knyazev A, Kröll T, Kurz N, Labiche M, Langer C, Le Bleis T, Lemmon R, Lindberg S, Machado J, Marganiec-Gałązka J, Movsesyan A, Nacher E, Nikolskii EY, Nilsson T, Nociforo C, Perea A, Petri M, Pietri S, Plag R, Reifarth R, Ribeiro G, Rigollet C, Rossi DM, Röder M, Savran D, Scheit H, Simon H, Sorlin O, Syndikus I, Taylor JT, Tengblad O, Thies R, Togano Y, Vandebrouck M, Velho P, Volkov V, Wagner A, Wamers F, Weick H, Wheldon C, Wilson GL, Winfield JS, Woods P, Yakorev D, Zhukov M, Zilges A, and Zuber K
- Abstract
Quasifree one-proton knockout reactions have been employed in inverse kinematics for a systematic study of the structure of stable and exotic oxygen isotopes at the R^{3}B/LAND setup with incident beam energies in the range of 300-450 MeV/u. The oxygen isotopic chain offers a large variation of separation energies that allows for a quantitative understanding of single-particle strength with changing isospin asymmetry. Quasifree knockout reactions provide a complementary approach to intermediate-energy one-nucleon removal reactions. Inclusive cross sections for quasifree knockout reactions of the type ^{A}O(p,2p)^{A-1}N have been determined and compared to calculations based on the eikonal reaction theory. The reduction factors for the single-particle strength with respect to the independent-particle model were obtained and compared to state-of-the-art ab initio predictions. The results do not show any significant dependence on proton-neutron asymmetry.
- Published
- 2018
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16. C1 lateral mass screw insertion from the caudal-dorsal to the cranial-ventral direction as an alternate method for C1 fixation: A quantitative anatomical and morphometric evaluation.
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Senoglu M, Karadag A, Kinali B, Bozkurt B, Icke C, Halacoglu Savran D, and Middlebrooks EH
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- Adult, Aged, Aged, 80 and over, Atlanto-Axial Joint surgery, Atlanto-Occipital Joint surgery, Female, Humans, Male, Middle Aged, Postoperative Complications prevention & control, Spinal Fusion adverse effects, Tomography, X-Ray Computed, Bone Screws adverse effects, Cervical Vertebrae surgery, Postoperative Complications epidemiology, Spinal Fusion methods
- Abstract
Object: C1 lateral mass screw has been widely used for fixation of the upper cervical spine. However, traditional fixation methods are not without complication. Morphometric measurement of an alternative approach is conducted., Methods: Three-dimensional CT scans of the cervical spine obtained in 100 adults were evaluated, and key measurements were determined for screw entry points, trajectories, and screw lengths for placement of a C1 screw via this alternate approach. Additional measures were included to account for relevant anatomic variation, including the size of the dangerous lateral zone of the C1 entry point and depth of the atlantooccipital joint surface. Twenty dried atlantal specimens were evaluated to determine corresponding ex vivo measurements., Results: The mean maximum angle of medialization was 20.8°±2.8° (right) and 21.1°±2.8° (left), as measured in the axial CT images. Sagittal CT images show the mean maximum superior angulation was 24.7°±4.3° (right) and 24°±4.0° (left), and the mean minimum superior angulation was 13.6°±4.4° (right) and 13.6°±3.9° (left). The mean screw length within the lateral mass was 21.2±1.9mm (right) and 21.3±2.0mm (left). Given an additional 10-15mm needed for rod adaptation, an ideal screw length of 30-35mm was determined., Conclusion: The C1 insertion caudally from the C2 nerve root may become an alternate method. Preoperative consideration of the ideal screw insertion point, trajectory, and length are vital for safe and effective surgical intervention., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
- Published
- 2017
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17. E2 decay strength of the M1 scissors mode of ^{156}Gd and its first excited rotational state.
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Beck T, Beller J, Pietralla N, Bhike M, Birkhan J, Derya V, Gayer U, Hennig A, Isaak J, Löher B, Ponomarev VY, Richter A, Romig C, Savran D, Scheck M, Tornow W, Werner V, Zilges A, and Zweidinger M
- Abstract
The E2/M1 multipole mixing ratio δ_{1→2} of the 1_{sc}^{+}→2_{1}^{+} γ-ray decay in ^{156}Gd and hence the isovector E2 transition rate of the scissors mode of a well-deformed rotational nucleus has been measured for the first time. It has been obtained from the angular distribution of an artificial quasimonochromatic linearly polarized γ-ray beam of energy 3.07(6) MeV scattered inelastically off an isotopically highly enriched ^{156}Gd target. The data yield first direct support for the deformation dependence of effective proton and neutron quadrupole boson charges in the framework of algebraic nuclear models. First evidence for a low-lying J^{π}=2^{+} member of the rotational band of states on top of the 1^{+} band head is obtained, too, indicating a significant signature splitting in the K=1 scissors mode rotational band.
- Published
- 2017
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18. Investigating the Pygmy Dipole Resonance Using β Decay.
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Scheck M, Mishev S, Ponomarev VY, Chapman R, Gaffney LP, Gregor ET, Pietralla N, Spagnoletti P, Savran D, and Simpson GS
- Abstract
In this contribution it is explored whether γ-ray spectroscopy following β decay with high Q values from mother nuclei with low ground-state spin can be exploited as a probe for the pygmy dipole resonance. The suitability of this approach is demonstrated by a comparison between data from photon scattering, ^{136}Xe(γ,γ^{'}), and ^{136}I [J_{0}^{π}=(1^{-})]→^{136}Xe^{*} β-decay data. It is demonstrated that β decay populates 1^{-} levels associated with the pygmy dipole resonance, but only a fraction of those. The complementary insight into the wave functions probed by β decay is elucidated by calculations within the quasiparticle phonon model. It is demonstrated that β decay dominantly populates complex configurations, which are only weakly excited in inelastic scattering experiments.
- Published
- 2016
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19. First observation of the unbound nucleus 15Ne.
- Author
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Wamers F, Marganiec J, Aksouh F, Aksyutina Y, Álvarez-Pol H, Aumann T, Beceiro-Novo S, Boretzky K, Borge MJ, Chartier M, Chatillon A, Chulkov LV, Cortina-Gil D, Emling H, Ershova O, Fraile LM, Fynbo HO, Galaviz D, Geissel H, Heil M, Hoffmann DH, Johansson HT, Jonson B, Karagiannis C, Kiselev OA, Kratz JV, Kulessa R, Kurz N, Langer C, Lantz M, Le Bleis T, Lemmon R, Litvinov YA, Mahata K, Müntz C, Nilsson T, Nociforo C, Nyman G, Ott W, Panin V, Paschalis S, Perea A, Plag R, Reifarth R, Richter A, Rodriguez-Tajes C, Rossi D, Riisager K, Savran D, Schrieder G, Simon H, Stroth J, Sümmerer K, Tengblad O, Weick H, Wimmer C, and Zhukov MV
- Abstract
We report on the first observation of the unbound proton-rich nucleus 15Ne. Its ground state and first excited state were populated in two-neutron knockout reactions from a beam of 500 MeV/u 17Ne. The 15Ne ground state is found to be unbound by 2.522(66) MeV. The decay proceeds directly to 13O with simultaneous two-proton emission. No evidence for sequential decay via the energetically allowed 2- and 1- states in 14F is observed. The 15Ne ground state is shown to have a strong configuration with two protons in the (sd) shell around 13O with a 63(5)% (1s1/2)2 component.
- Published
- 2014
- Full Text
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20. Measurement of the dipole polarizability of the unstable neutron-rich nucleus 68Ni.
- Author
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Rossi DM, Adrich P, Aksouh F, Alvarez-Pol H, Aumann T, Benlliure J, Böhmer M, Boretzky K, Casarejos E, Chartier M, Chatillon A, Cortina-Gil D, Datta Pramanik U, Emling H, Ershova O, Fernandez-Dominguez B, Geissel H, Gorska M, Heil M, Johansson HT, Junghans A, Kelic-Heil A, Kiselev O, Klimkiewicz A, Kratz JV, Krücken R, Kurz N, Labiche M, Le Bleis T, Lemmon R, Litvinov YA, Mahata K, Maierbeck P, Movsesyan A, Nilsson T, Nociforo C, Palit R, Paschalis S, Plag R, Reifarth R, Savran D, Scheit H, Simon H, Sümmerer K, Wagner A, Waluś W, Weick H, and Winkler M
- Abstract
The E1 strength distribution in 68Ni has been investigated using Coulomb excitation in inverse kinematics at the R3B-LAND setup and by measuring the invariant mass in the one- and two-neutron decay channels. The giant dipole resonance and a low-lying peak (pygmy dipole resonance) have been observed at 17.1(2) and 9.55(17) MeV, respectively. The measured dipole polarizability is compared to relativistic random phase approximation calculations yielding a neutron-skin thickness of 0.17(2) fm. A method and analysis applicable to neutron-rich nuclei has been developed, allowing for a precise determination of neutron skins in nuclei as a function of neutron excess.
- Published
- 2013
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21. Constraint on 0νββ matrix elements from a novel decay channel of the scissors mode: the case of 154Gd.
- Author
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Beller J, Pietralla N, Barea J, Elvers M, Endres J, Fransen C, Kotila J, Möller O, Richter A, Rodríguez TR, Romig C, Savran D, Scheck M, Schnorrenberger L, Sonnabend K, Werner V, Zilges A, and Zweidinger M
- Abstract
The nucleus (154)Gd is located in a region of the nuclear chart where rapid changes of nuclear deformation occur as a function of particle number. It was investigated using a combination of γ-ray scattering experiments and a γγ-coincidence study following electron capture decay of (154)Tb(m). A novel decay channel from the scissors mode to the first excited 0(+) state was observed. Its transition strength was determined to B(M1;1(sc)(+)→0(2)(+))=0.031(4)μ(N)(2). The properties of the scissors mode of (154)Gd imply a much larger matrix element than previously thought for the neutrinoless double-β decay to the 0(2)(+) state in such a shape-transitional region. Theory indicates an even larger effect for (150)Nd.
- Published
- 2013
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22. Isospin character of the pygmy dipole resonance in 124Sn.
- Author
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Endres J, Litvinova E, Savran D, Butler PA, Harakeh MN, Harissopulos S, Herzberg RD, Krücken R, Lagoyannis A, Pietralla N, Ponomarev VY, Popescu L, Ring P, Scheck M, Sonnabend K, Stoica VI, Wörtche HJ, and Zilges A
- Abstract
The pygmy dipole resonance has been studied in the proton-magic nucleus 124Sn with the (α, α'γ) coincidence method at Eα=136 MeV. The comparison with results of photon-scattering experiments reveals a splitting into two components with different structure: one group of states which is excited in (α, α'γ) as well as in (γ, γ') reactions and a group of states at higher energies which is only excited in (γ, γ') reactions. Calculations with the self-consistent relativistic quasiparticle time-blocking approximation and the quasiparticle phonon model are in qualitative agreement with the experimental results and predict a low-lying isoscalar component dominated by neutron-skin oscillations and a higher-lying more isovector component on the tail of the giant dipole resonance.
- Published
- 2010
- Full Text
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23. Effect of cooking method (baking compared with frying) on acrylamide level of potato chips.
- Author
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Palazoğlu TK, Savran D, and Gökmen V
- Subjects
- Chromatography, Liquid, Food Handling methods, Hot Temperature, Mass Spectrometry, Acrylamide analysis, Asparagine analysis, Carbohydrates analysis, Cooking methods, Solanum tuberosum chemistry
- Abstract
The effect of cooking method (baking compared with frying) on acrylamide level of potato chips was investigated in this study. Baking and frying experiments were conducted at 170, 180, and 190 degrees C using potato slices with a thickness of 1.4 mm. Raw potatoes were analyzed for reducing sugars and asparagine. Surface and internal temperatures of potato slices were monitored during the experiments to better explain the results. Fried and baked chips were analyzed for acrylamide content using an LC-MS method. The results showed that acrylamide level of potato chips prepared by frying increased with frying temperature (19.6 ng/g at 170 degrees C, 39 ng/g at 180 degrees C, and 95 ng/g at 190 degrees C). In baking, however, the highest acrylamide level was observed in potato chips prepared at 170 degrees C (47.8 ng/g at 170 degrees C, 19.3 ng/g at 180 degrees C, and 29.7 ng/g at 190 degrees C). The results showed that baking at 170 degrees C more than doubled the acrylamide amount that formed upon frying at the same temperature, whereas at 180 and 190 degrees C, the acrylamide levels of chips prepared by baking were lower than their fried counterparts.
- Published
- 2010
- Full Text
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24. Fine structure of the pygmy dipole resonance in (136)Xe.
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Savran D, Fritzsche M, Hasper J, Lindenberg K, Müller S, Ponomarev VY, Sonnabend K, and Zilges A
- Abstract
The photoresponse of the semimagic N=82 nucleus (136)Xe was measured up to the neutron separation energy S(n) using the (gamma, gamma') reaction. A concentration of strong dipole excitations is observed well below S(n) showing a fragmented resonancelike structure. Microscopic calculations in the quasiparticle phonon model including complex configurations of up to three phonons agree well with the experimental data in the total integrated strength, in the shape and the fragmentation of the resonance, which allows us to draw conclusions on the damping mechanism of the pygmy dipole resonance.
- Published
- 2008
- Full Text
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25. Nature of the pygmy dipole resonance in 140Ce studied in (alpha, alpha' gamma) experiments.
- Author
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Savran D, Babilon M, van den Berg AM, Harakeh MN, Hasper J, Matic A, Wörtche HJ, and Zilges A
- Abstract
A concentration of electric-dipole excitations below the particle threshold, which is frequently denoted as the pygmy dipole resonance, has been studied in the semimagic nucleus 140Ce in (alpha, alpha' gamma) experiments at E alpha = 136 MeV. The technique of alpha-gamma coincidence experiments allows the separation of E1 excitations from states of other multipolarities in the same energy region and provides an excellent energy resolution to allow a detailed analysis for each state. The experimental results show that the PDR splits into two parts with different nuclear structure: one part which is excited in (alpha, alpha' gamma) as well as (gamma, gamma') experiments and one part which is excited only in (gamma, gamma').
- Published
- 2006
- Full Text
- View/download PDF
26. Microscopic nature of the pygmy dipole resonance: the stable Ca isotopes.
- Author
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Hartmann T, Babilon M, Kamerdzhiev S, Litvinova E, Savran D, Volz S, and Zilges A
- Abstract
The electric dipole strength distribution in 44Ca has been measured up to 10 MeV in high resolution photon scattering experiments for the first time. The data obtained have been compared to earlier measurements on (40,48)Ca in order to view the evolution of the electric pygmy dipole resonance (PDR). Calculations that were performed within the framework of the microscopic extended theory of finite Fermi systems, which adds contributions of the quasiparticle-phonon coupling to random phase approximation calculations, give a qualitative agreement with the experimental data for all three isotopes. We have shown that it is necessary to include this coupling to describe the PDR.
- Published
- 2004
- Full Text
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27. Hemodynamics associated with breathing through an inspiratory impedance threshold device in human volunteers.
- Author
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Convertino VA, Ratliff DA, Ryan KL, Doerr DF, Ludwig DA, Muniz GW, Britton DL, Clah SD, Fernald KB, Ruiz AF, Lurie KG, and Idris AH
- Subjects
- Adult, Female, Humans, Male, Stroke Volume, Blood Pressure, Cardiography, Impedance instrumentation, Heart Rate, Masks, Respiration
- Abstract
Objective: Increased negative intrathoracic pressure during spontaneous inspiration through an impedance threshold device (ITD) causes elevated arterial blood pressure in humans. This study was performed to determine whether the acute increase in blood pressure induced by breathing through an ITD is associated with increased stroke volume and cardiac output., Design: Randomized, blinded, controlled trial., Setting: Laboratory., Subjects: Ten women and ten men., Interventions: We measured hemodynamic and respiratory responses during two separate ITD conditions: 1) breathing through a face mask with an ITD (impedance of 6 cm H2O [0.59 kPa]) and 2) breathing through the same face mask with a sham ITD (control). Stroke volume was measured by thoracic bioimpedance., Measurements and Main Results: Compared with the control condition, ITD produced higher stroke volume (124 +/- 3 vs. 137 +/- 3 mL; p = .013), heart rate (63 +/- 3 vs. 68 +/- 3 beats/min; p = .049), cardiac output (7.69 vs. 9.34 L/min; p = .001), and systolic blood pressure (115 +/- 2 to 122 +/- 2 mm Hg [15.33 +/- 0.3 to 16.26 +/- 0.3 kPa]; p = .005) without affecting expired minute ventilation (6.2 +/- 0.4 to 6.5 +/- 0.4 L/min; p = .609)., Conclusions: Breathing with an ITD at relatively low impedance increases systolic blood pressure by increasing stroke volume and cardiac output. The ITD may provide short-term protection against cardiovascular collapse induced by orthostatic stress or hemorrhage.
- Published
- 2004
- Full Text
- View/download PDF
28. Effects of inspiratory impedance on the carotid-cardiac baroreflex response in humans.
- Author
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Convertino VA, Ratliff DA, Ryan KL, Cooke WH, Doerr DF, Ludwig DA, Muniz GW, Britton DL, Clah SD, Fernald KB, Ruiz AF, Idris A, and Lurie KG
- Subjects
- Adult, Blood Pressure physiology, Female, Heart Rate physiology, Humans, Male, Respiratory Function Tests instrumentation, Respiratory Mechanics physiology, Sex Characteristics, Tidal Volume physiology, Vagus Nerve physiology, Airway Resistance physiology, Baroreflex physiology, Carotid Arteries physiology, Heart physiology
- Abstract
We were interested in a therapeutic device designed to increase carotid-cardiac baroreflex sensitivity (BRS) since high BRS is associated with a lower risk for development of hypotension in humans with experimentally-induced central hypovolemia. We hypothesized that spontaneous breathing through an impedance threshold device (ITD) designed to increase negative intrathoracic pressure during inspiration and elevate arterial blood pressure would acutely increase BRS in humans. We tested this hypothesis by measuring heart rate (HR), systolic (SBP) and diastolic (DBP) blood pressures, and carotid-cardiac BRS in 10 female and 10 male subjects breathing through a face mask at three separate ITD conditions: (a) 6 cm H(2)O; (b) 12 cm H(2)O; and (c) a control (0 cm H(2)O). HR was increased (P = 0. 013) from 64 +/- 3 bpm during control to 68 +/- 3 bpm at 6 cm H(2)O ITD and 71 +/- 4 bpm at 12 cm H(2)O ITD breathing conditions. During ITD breathing, BRS was not altered but responses were shifted to higher arterial pressures. However, SBP and DBP were elevated for both the 6 and 12 cm H(2)O conditions compared to the 0 cm H(2)O condition, but returned to control (sham) levels by 30 minutes after cessation of ITD breathing. There were no gender effects for BRS or any hemodynamic responses to breathing through the ITD. We conclude that breathing with inspiratory impedance at relatively low pressures can increase baseline arterial blood pressure, i. e., reset the operational point for SBP on the baroreflex stimulus-response relationship, in healthy subjects. This resetting of the cardiac baroreflex may represent a mechanism that allows blood pressure to increase without a reflex-mediated reduction in HR.
- Published
- 2004
- Full Text
- View/download PDF
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