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9 results on '"Hong, Cheng-Fang"'

1. Translocation of fungicides and their efficacy in controlling Phellinus noxius, the cause of brown root rot disease

Author

Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., Chung, Chia-Lin, Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., and Chung, Chia-Lin

Abstract

Brown root rot disease (BRRD), caused by Phellinus noxius, is an important tree disease in tropical/subtropical areas. To improve chemical control of BRRD and deter emergence of fungicide resistance in P. noxius, this study investigated control efficacies and systemic activities of fungicides with different modes of action. Fourteen fungicides with 11 different modes of action were tested for inhibitory effects in vitro on 39 P. noxius isolates from Taiwan, Hong Kong, Malaysia, Australia, and Pacific Islands. Cyproconazole, epoxiconazole, and tebuconazole (FRAC 3, target-site G1) inhibited colony growth of P. noxius by 99.9 to 100% at 10 ppm and 97.7 to 99.8% at 1 ppm. The other effective fungicide was cyprodinil + fludioxonil (FRAC 9 + 12, target-site D1 + E2), which showed growth inhibition of 96.9% at 10 ppm and 88.6% at 1 ppm. Acropetal translocation of six selected fungicides was evaluated in bishop wood (Bischofia javanica) seedlings by immersion of the root tips in 100 ppm of each fungicide, followed by liquid or gas chromatography tandem-mass spectrometry analyses of consecutive segments of root, stem, and leaf tissues at 7- and 21-days post-treatment. Bi-directional translocation of the fungicides was also evaluated by stem injection of fungicide solutions. Cyproconazole and tebuconazole were the most readily absorbed by roots and efficiently transported acropetally. Greenhouse experiments suggested that cyproconazole, tebuconazole, and epoxiconazole have a slightly higher potential for controlling BRRD than mepronil, prochloraz, and cyprodinil + fludioxonil. Because all tested fungicides lacked basipetal translocation, soil drenching should be considered instead of trunk injection for their use in BRRD control.

Published
2023

2. Translocation of fungicides and their efficacy in controlling Phellinus noxius, the cause of brown root rot disease

Author

Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., Chung, Chia-Lin, Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., and Chung, Chia-Lin

Abstract

Brown root rot disease (BRRD), caused by Phellinus noxius, is an important tree disease in tropical/subtropical areas. To improve chemical control of BRRD and deter emergence of fungicide resistance in P. noxius, this study investigated control efficacies and systemic activities of fungicides with different modes of action. Fourteen fungicides with 11 different modes of action were tested for inhibitory effects in vitro on 39 P. noxius isolates from Taiwan, Hong Kong, Malaysia, Australia, and Pacific Islands. Cyproconazole, epoxiconazole, and tebuconazole (FRAC 3, target-site G1) inhibited colony growth of P. noxius by 99.9 to 100% at 10 ppm and 97.7 to 99.8% at 1 ppm. The other effective fungicide was cyprodinil + fludioxonil (FRAC 9 + 12, target-site D1 + E2), which showed growth inhibition of 96.9% at 10 ppm and 88.6% at 1 ppm. Acropetal translocation of six selected fungicides was evaluated in bishop wood (Bischofia javanica) seedlings by immersion of the root tips in 100 ppm of each fungicide, followed by liquid or gas chromatography tandem-mass spectrometry analyses of consecutive segments of root, stem, and leaf tissues at 7- and 21-days post-treatment. Bi-directional translocation of the fungicides was also evaluated by stem injection of fungicide solutions. Cyproconazole and tebuconazole were the most readily absorbed by roots and efficiently transported acropetally. Greenhouse experiments suggested that cyproconazole, tebuconazole, and epoxiconazole have a slightly higher potential for controlling BRRD than mepronil, prochloraz, and cyprodinil + fludioxonil. Because all tested fungicides lacked basipetal translocation, soil drenching should be considered instead of trunk injection for their use in BRRD control.

Published
2023

3. Translocation of fungicides and their efficacy in controlling Phellinus noxius, the cause of brown root rot disease

Author

Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., Chung, Chia-Lin, Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., and Chung, Chia-Lin

Abstract

Brown root rot disease (BRRD), caused by Phellinus noxius, is an important tree disease in tropical/subtropical areas. To improve chemical control of BRRD and deter emergence of fungicide resistance in P. noxius, this study investigated control efficacies and systemic activities of fungicides with different modes of action. Fourteen fungicides with 11 different modes of action were tested for inhibitory effects in vitro on 39 P. noxius isolates from Taiwan, Hong Kong, Malaysia, Australia, and Pacific Islands. Cyproconazole, epoxiconazole, and tebuconazole (FRAC 3, target-site G1) inhibited colony growth of P. noxius by 99.9 to 100% at 10 ppm and 97.7 to 99.8% at 1 ppm. The other effective fungicide was cyprodinil + fludioxonil (FRAC 9 + 12, target-site D1 + E2), which showed growth inhibition of 96.9% at 10 ppm and 88.6% at 1 ppm. Acropetal translocation of six selected fungicides was evaluated in bishop wood (Bischofia javanica) seedlings by immersion of the root tips in 100 ppm of each fungicide, followed by liquid or gas chromatography tandem-mass spectrometry analyses of consecutive segments of root, stem, and leaf tissues at 7- and 21-days post-treatment. Bi-directional translocation of the fungicides was also evaluated by stem injection of fungicide solutions. Cyproconazole and tebuconazole were the most readily absorbed by roots and efficiently transported acropetally. Greenhouse experiments suggested that cyproconazole, tebuconazole, and epoxiconazole have a slightly higher potential for controlling BRRD than mepronil, prochloraz, and cyprodinil + fludioxonil. Because all tested fungicides lacked basipetal translocation, soil drenching should be considered instead of trunk injection for their use in BRRD control.

Published
2023

4. Translocation of Fungicides and Their Efficacy in Controlling Phellinus noxius, the Cause of Brown Root Rot Disease

Author

Liao Ting-Zhi, Chen Yu-Hsuan, Tsai Jyh-Nong, Chao Chieh, Huang Tzu-Pi, Hong Cheng-Fang, Wu Zong-Chi, Tsai Isheng Jason, Lee Hsin-Han, Klopfenstein Ned B., Kim Mee-Sook, Stewart Jane E., Atibalentja Ndeme, Brooks Fred E., Cannon Philip G., Farid A. Mohd, Hattori Tsutomu, Kwan Hoi-Shan, Ching Lam Regent Yau, Ota Yuko, Sahashi Norio, Schlub Robert L., Shuey Louise S., Tang Alvin M. C., Chung Chia-Lin, Liao Ting-Zhi, Chen Yu-Hsuan, Tsai Jyh-Nong, Chao Chieh, Huang Tzu-Pi, Hong Cheng-Fang, Wu Zong-Chi, Tsai Isheng Jason, Lee Hsin-Han, Klopfenstein Ned B., Kim Mee-Sook, Stewart Jane E., Atibalentja Ndeme, Brooks Fred E., Cannon Philip G., Farid A. Mohd, Hattori Tsutomu, Kwan Hoi-Shan, Ching Lam Regent Yau, Ota Yuko, Sahashi Norio, Schlub Robert L., Shuey Louise S., Tang Alvin M. C., and Chung Chia-Lin

Published
2023

5. Translocation of fungicides and their efficacy in controlling Phellinus noxius, the cause of brown root rot disease

Author

Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., Chung, Chia-Lin, Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., and Chung, Chia-Lin

Abstract

Brown root rot disease (BRRD), caused by Phellinus noxius, is an important tree disease in tropical/subtropical areas. To improve chemical control of BRRD and deter emergence of fungicide resistance in P. noxius, this study investigated control efficacies and systemic activities of fungicides with different modes of action. Fourteen fungicides with 11 different modes of action were tested for inhibitory effects in vitro on 39 P. noxius isolates from Taiwan, Hong Kong, Malaysia, Australia, and Pacific Islands. Cyproconazole, epoxiconazole, and tebuconazole (FRAC 3, target-site G1) inhibited colony growth of P. noxius by 99.9 to 100% at 10 ppm and 97.7 to 99.8% at 1 ppm. The other effective fungicide was cyprodinil + fludioxonil (FRAC 9 + 12, target-site D1 + E2), which showed growth inhibition of 96.9% at 10 ppm and 88.6% at 1 ppm. Acropetal translocation of six selected fungicides was evaluated in bishop wood (Bischofia javanica) seedlings by immersion of the root tips in 100 ppm of each fungicide, followed by liquid or gas chromatography tandem-mass spectrometry analyses of consecutive segments of root, stem, and leaf tissues at 7- and 21-days post-treatment. Bi-directional translocation of the fungicides was also evaluated by stem injection of fungicide solutions. Cyproconazole and tebuconazole were the most readily absorbed by roots and efficiently transported acropetally. Greenhouse experiments suggested that cyproconazole, tebuconazole, and epoxiconazole have a slightly higher potential for controlling BRRD than mepronil, prochloraz, and cyprodinil + fludioxonil. Because all tested fungicides lacked basipetal translocation, soil drenching should be considered instead of trunk injection for their use in BRRD control.

Published
2023

6. Translocation of fungicides and their efficacy in controlling Phellinus noxius, the cause of brown root rot disease

Author

Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., Chung, Chia-Lin, Liao, Ting-Zhi, Chen, Yu-Hsuan, Tsai, Jyh-Nong, Chao, Chieh, Huang, Tzu-Pi, Hong, Cheng-Fang, Wu, Zong-Chi, Tsai, Isheng Jason, Lee, Hsin-Han, Klopfenstein, Ned Brian, Kim, Mee-Sook, Stewart, Jane E., Atibalentja, Ndeme, Brooks, Fred E., Cannon, Phil, Mohd Farid, Ahmad, Hattori, Tsutomu, Kwan, Hoi-Shan, Lam, Yau-Ching Regent, Ota, Yuko, Sahashi, Norio, Schlub, Robert L., Shuey, Louise S., Tang, Alvin M. C., and Chung, Chia-Lin

Abstract

Brown root rot disease (BRRD), caused by Phellinus noxius, is an important tree disease in tropical/subtropical areas. To improve chemical control of BRRD and deter emergence of fungicide resistance in P. noxius, this study investigated control efficacies and systemic activities of fungicides with different modes of action. Fourteen fungicides with 11 different modes of action were tested for inhibitory effects in vitro on 39 P. noxius isolates from Taiwan, Hong Kong, Malaysia, Australia, and Pacific Islands. Cyproconazole, epoxiconazole, and tebuconazole (FRAC 3, target-site G1) inhibited colony growth of P. noxius by 99.9 to 100% at 10 ppm and 97.7 to 99.8% at 1 ppm. The other effective fungicide was cyprodinil + fludioxonil (FRAC 9 + 12, target-site D1 + E2), which showed growth inhibition of 96.9% at 10 ppm and 88.6% at 1 ppm. Acropetal translocation of six selected fungicides was evaluated in bishop wood (Bischofia javanica) seedlings by immersion of the root tips in 100 ppm of each fungicide, followed by liquid or gas chromatography tandem-mass spectrometry analyses of consecutive segments of root, stem, and leaf tissues at 7- and 21-days post-treatment. Bi-directional translocation of the fungicides was also evaluated by stem injection of fungicide solutions. Cyproconazole and tebuconazole were the most readily absorbed by roots and efficiently transported acropetally. Greenhouse experiments suggested that cyproconazole, tebuconazole, and epoxiconazole have a slightly higher potential for controlling BRRD than mepronil, prochloraz, and cyprodinil + fludioxonil. Because all tested fungicides lacked basipetal translocation, soil drenching should be considered instead of trunk injection for their use in BRRD control.

Published
2022

7. Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex.

Author

Geiser, David M, Geiser, David M, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus JN, Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward CY, Lofton, Lily W, Logrieco, Antonio F, López-Berges, Manuel S, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, NMI, Monod, Michel, Moretti, Antonio, Mostert, Diane, Mulè, Giuseppina, Geiser, David M, Geiser, David M, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus JN, Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward CY, Lofton, Lily W, Logrieco, Antonio F, López-Berges, Manuel S, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, NMI, Monod, Michel, Moretti, Antonio, Mostert, Diane, and Mulè, Giuseppina

Abstract

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available.

Published
2021

8. Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex.

Author

Geiser, David M, Geiser, David M, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus JN, Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward CY, Lofton, Lily W, Logrieco, Antonio F, López-Berges, Manuel S, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, NMI, Monod, Michel, Moretti, Antonio, Mostert, Diane, Mulè, Giuseppina, Geiser, David M, Geiser, David M, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus JN, Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward CY, Lofton, Lily W, Logrieco, Antonio F, López-Berges, Manuel S, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, NMI, Monod, Michel, Moretti, Antonio, Mostert, Diane, and Mulè, Giuseppina

Abstract

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available.

Published
2021

9. Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex

Author

Geiser, David M, Al-Hatmi, Abdullah M S, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus J. N., Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward C Y, Lofton, Lily W, Logrieco, Antonio F, S López-Berges, Manuel, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, N M I, Monod, Michel, Moretti, Antonio, Mostert, Diane, Mulè, Giuseppina, Munaut, Françoise, Munkvold, Gary P, Nicholson, Paul, Nucci, Marcio, O'Donnell, Kerry, Pasquali, Matias, Pfenning, Ludwig H, Prigitano, Anna, Proctor, Robert H, Ranque, Stéphane, Rehner, Stephen A, Rep, Martijn, Rodríguez-Alvarado, Gerardo, Rose, Lindy Joy, Roth, Mitchell G, Ruiz-Roldán, Carmen, Saleh, Amgad A, Salleh, Baharuddin, Sang, Hyunkyu, Scandiani, María Mercedes, Scauflaire, Jonathan, Schmale, David G, Short, Dylan P G, Šišić, Adnan, Smith, Jason A, Smyth, Christopher W, Son, Hokyoung, Spahr, Ellie, Stajich, Jason E, Steenkamp, Emma, Steinberg, Christian, Subramaniam, Rajagopal, Suga, Haruhisa, Summerell, Brett A, Susca, Antonella, Swett, Cassandra L, Toomajian, Christopher, Torres-Cruz, Terry J, Tortorano, Anna M, Urban, Martin, Vaillancourt, Lisa J, Vallad, Gary E, van der Lee, Theo A J, Vanderpool, Dan, van Diepeningen, Anne D, Vaughan, Martha M, Venter, Eduard, Vermeulen, Marcele, Verweij, Paul E, Viljoen, Altus, Waalwijk, Cees, Wallace, Emma C, Walther, Grit, Wang, Jie, Ward, Todd J, Wickes, Brian L, Wiederhold, Nathan P, Wingfield, Michael J, Wood, Ana K M, Xu, Jin-Rong, Yang, Xiao-Bing, Yli-Mattila, Tapani, Yun, Sung-Hwan, Zakaria, Latiffah, Zhang, Hao, Zhang, Ning, Zhang, Sean X, Zhang, Xue, Geiser, David M, Al-Hatmi, Abdullah M S, Aoki, Takayuki, Arie, Tsutomu, Balmas, Virgilio, Barnes, Irene, Bergstrom, Gary C, Bhattacharyya, Madan K, Blomquist, Cheryl L, Bowden, Robert L, Brankovics, Balázs, Brown, Daren W, Burgess, Lester W, Bushley, Kathryn, Busman, Mark, Cano-Lira, José F, Carrillo, Joseph D, Chang, Hao-Xun, Chen, Chi-Yu, Chen, Wanquan, Chilvers, Martin, Chulze, Sofia, Coleman, Jeffrey J, Cuomo, Christina A, de Beer, Z Wilhelm, de Hoog, G Sybren, Del Castillo-Múnera, Johanna, Del Ponte, Emerson M, Diéguez-Uribeondo, Javier, Di Pietro, Antonio, Edel-Hermann, Véronique, Elmer, Wade H, Epstein, Lynn, Eskalen, Akif, Esposto, Maria Carmela, Everts, Kathryne L, Fernández-Pavía, Sylvia P, da Silva, Gilvan Ferreira, Foroud, Nora A, Fourie, Gerda, Frandsen, Rasmus J. N., Freeman, Stanley, Freitag, Michael, Frenkel, Omer, Fuller, Kevin K, Gagkaeva, Tatiana, Gardiner, Donald M, Glenn, Anthony E, Gold, Scott E, Gordon, Thomas R, Gregory, Nancy F, Gryzenhout, Marieka, Guarro, Josep, Gugino, Beth K, Gutierrez, Santiago, Hammond-Kosack, Kim E, Harris, Linda J, Homa, Mónika, Hong, Cheng-Fang, Hornok, László, Huang, Jenn-Wen, Ilkit, Macit, Jacobs, Adriaana, Jacobs, Karin, Jiang, Cong, Jiménez-Gasco, María Del Mar, Kang, Seogchan, Kasson, Matthew T, Kazan, Kemal, Kennell, John C, Kim, Hye-Seon, Kistler, H Corby, Kuldau, Gretchen A, Kulik, Tomasz, Kurzai, Oliver, Laraba, Imane, Laurence, Matthew H, Lee, Theresa, Lee, Yin-Won, Lee, Yong-Hwan, Leslie, John F, Liew, Edward C Y, Lofton, Lily W, Logrieco, Antonio F, S López-Berges, Manuel, Luque, Alicia G, Lysøe, Erik, Ma, Li-Jun, Marra, Robert E, Martin, Frank N, May, Sara R, McCormick, Susan P, McGee, Chyanna, Meis, Jacques F, Migheli, Quirico, Mohamed Nor, N M I, Monod, Michel, Moretti, Antonio, Mostert, Diane, Mulè, Giuseppina, Munaut, Françoise, Munkvold, Gary P, Nicholson, Paul, Nucci, Marcio, O'Donnell, Kerry, Pasquali, Matias, Pfenning, Ludwig H, Prigitano, Anna, Proctor, Robert H, Ranque, Stéphane, Rehner, Stephen A, Rep, Martijn, Rodríguez-Alvarado, Gerardo, Rose, Lindy Joy, Roth, Mitchell G, Ruiz-Roldán, Carmen, Saleh, Amgad A, Salleh, Baharuddin, Sang, Hyunkyu, Scandiani, María Mercedes, Scauflaire, Jonathan, Schmale, David G, Short, Dylan P G, Šišić, Adnan, Smith, Jason A, Smyth, Christopher W, Son, Hokyoung, Spahr, Ellie, Stajich, Jason E, Steenkamp, Emma, Steinberg, Christian, Subramaniam, Rajagopal, Suga, Haruhisa, Summerell, Brett A, Susca, Antonella, Swett, Cassandra L, Toomajian, Christopher, Torres-Cruz, Terry J, Tortorano, Anna M, Urban, Martin, Vaillancourt, Lisa J, Vallad, Gary E, van der Lee, Theo A J, Vanderpool, Dan, van Diepeningen, Anne D, Vaughan, Martha M, Venter, Eduard, Vermeulen, Marcele, Verweij, Paul E, Viljoen, Altus, Waalwijk, Cees, Wallace, Emma C, Walther, Grit, Wang, Jie, Ward, Todd J, Wickes, Brian L, Wiederhold, Nathan P, Wingfield, Michael J, Wood, Ana K M, Xu, Jin-Rong, Yang, Xiao-Bing, Yli-Mattila, Tapani, Yun, Sung-Hwan, Zakaria, Latiffah, Zhang, Hao, Zhang, Ning, Zhang, Sean X, and Zhang, Xue

Abstract

Scientific communication is facilitated by a data-driven, scientifically sound taxonomy that considers the end-user's needs and established successful practice. In 2013, the Fusarium community voiced near unanimous support for a concept of Fusarium that represented a clade comprising all agriculturally and clinically important Fusarium species, including the F. solani species complex (FSSC). Subsequently, this concept was challenged in 2015 by one research group who proposed dividing the genus Fusarium into seven genera, including the FSSC described as members of the genus Neocosmospora, with subsequent justification in 2018 based on claims that the 2013 concept of Fusarium is polyphyletic. Here, we test this claim and provide a phylogeny based on exonic nucleotide sequences of 19 orthologous protein-coding genes that strongly support the monophyly of Fusarium including the FSSC. We reassert the practical and scientific argument in support of a genus Fusarium that includes the FSSC and several other basal lineages, consistent with the longstanding use of this name among plant pathologists, medical mycologists, quarantine officials, regulatory agencies, students, and researchers with a stake in its taxonomy. In recognition of this monophyly, 40 species described as genus Neocosmospora were recombined in genus Fusarium, and nine others were renamed Fusarium. Here the global Fusarium community voices strong support for the inclusion of the FSSC in Fusarium, as it remains the best scientific, nomenclatural, and practical taxonomic option available.

Published
2021

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