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Regional genetic differentiation within species is often addressed in evolutionary ecology and conservation biology. Here, we address regional differentiation in two closely related hybridizing taxa, the perennial sedges Carex flava and C. viridula and their hybrid C. × subviridula in 37 populations in the north and centre of their distribution range in Europe (Estonia, Lowland (<1000 m a.s.l.) and Highland Switzerland) using 10 putative microsatellite loci. We ask whether regional differentiation was larger in the less common taxon C. viridula or whether, possibly due to hybridization, it was similar between taxa. Our results showed similar, low to moderate genetic diversity for the three studied taxa. In total, we found 12 regional species-specific alleles. Analysis of molecular variance (AMOVA), STRUCTURE and multidimensional scaling analysis showed regional structure in genetic variation, where intraspecific differentiation between regions was lower for C. flava (AMOVA: 6.84 %) than for C. viridula (20.77 %) or C. × subviridula (18.27 %) populations. Hybrids differed from the parental taxa in the two regions where they occurred, i.e. in Estonia and Lowland Switzerland. We conclude that C. flava and C. viridula clearly differ from each other genetically, that there is pronounced regional differentiation and that, despite hybridization, this regional differentiation is more pronounced in the less common taxon, C. viridula. We encourage future studies on hybridizing taxa to work with plant populations from more than one region.

Rarer species are expected to show stronger geographic differentiation than more common species. However, if rare species hybridize with common species, differentiation may be quite similar between the two due to genetic admixing via backcrossing. We studied morphological differentiation of plants of 21 natural populations of the more common Carex flava, 16 of the less common Carex viridula and 6 of their hybrids from 27 sites in three climatically different regions, Estonia, Lowland Switzerland and Highland Switzerland. Univariate ANOVA and multivariate principal component analysis of 14 morphological characters, describing both vegetative and reproductive characters, allowed to clearly distinguish C. flava from C. viridula. Carex viridula populations showed stronger regional variation than C. flava. Hybrids had both intermediate and transgressive characters in Switzerland and Estonia. On average, hybrids from Lowland Switzerland were more similar to Swiss C. flava than to C. viridula, while hybrids from Estonia were morphologically intermediate between plants of Estonian populations of the parental species. The results suggest that within-region genetic admixing between species has limited potential to lead to region-specific similarity between species, at least in our model system of the C. flava complex. We conclude that C. flava and C. viridula are clearly distinct species and that, despite hybridization, geographic differentiation is more pronounced in the less common C. viridula than in C. flava.

Regional genetic differentiation within species is often addressed in evolutionary ecology and conservation biology. Here, we address regional differentiation in two closely related hybridizing taxa, the perennial sedges Carex flava and C. viridula and their hybrid C. × subviridula in 37 populations in the north and centre of their distribution range in Europe (Estonia, Lowland (<1000 m a.s.l.) and Highland Switzerland) using 10 putative microsatellite loci. We ask whether regional differentiation was larger in the less common taxon C. viridula or whether, possibly due to hybridization, it was similar between taxa. Our results showed similar, low to moderate genetic diversity for the three studied taxa. In total, we found 12 regional species-specific alleles. Analysis of molecular variance (AMOVA), STRUCTURE and multidimensional scaling analysis showed regional structure in genetic variation, where intraspecific differentiation between regions was lower for C. flava (AMOVA: 6.84 %) than for C. viridula (20.77 %) or C. × subviridula (18.27 %) populations. Hybrids differed from the parental taxa in the two regions where they occurred, i.e. in Estonia and Lowland Switzerland. We conclude that C. flava and C. viridula clearly differ from each other genetically, that there is pronounced regional differentiation and that, despite hybridization, this regional differentiation is more pronounced in the less common taxon, C. viridula. We encourage future studies on hybridizing taxa to work with plant populations from more than one region.