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We investigate identifying the boundary of a domain from sample points in the domain. We introduce new estimators for the normal vector to the boundary, distance of a point to the boundary, and a test for whether a point lies within a boundary strip. The estimators can be efficiently computed and are more accurate than the ones present in the literature. We provide rigorous error estimates for the estimators. Furthermore we use the detected boundary points to solve boundary-value problems for PDE on point clouds. We prove error estimates for the Laplace and eikonal equations on point clouds. Finally we provide a range of numerical experiments illustrating the performance of our boundary estimators, applications to PDE on point clouds, and tests on image data sets., Comment: 53 pages, 14 figures

In this work we build a unifying framework to interpolate between density-driven and geometry-based algorithms for data clustering, and specifically, to connect the mean shift algorithm with spectral clustering at discrete and continuum levels. We seek this connection through the introduction of Fokker-Planck equations on data graphs. Besides introducing new forms of mean shift algorithms on graphs, we provide new theoretical insights on the behavior of the family of diffusion maps in the large sample limit as well as provide new connections between diffusion maps and mean shift dynamics on a fixed graph. Several numerical examples illustrate our theoretical findings and highlight the benefits of interpolating density-driven and geometry-based clustering algorithms.

We study graph-based Laplacian semi-supervised learning at low labeling rates. Laplacian learning uses harmonic extension on a graph to propagate labels. At very low label rates, Laplacian learning becomes degenerate and the solution is roughly constant with spikes at each labeled data point. Previous work has shown that this degeneracy occurs when the number of labeled data points is finite while the number of unlabeled data points tends to infinity. In this work we allow the number of labeled data points to grow to infinity with the number of labels. Our results show that for a random geometric graph with length scale $\varepsilon>0$ and labeling rate $\beta>0$, if $\beta \ll\varepsilon^2$ then the solution becomes degenerate and spikes form, and if $\beta\gg \varepsilon^2$ then Laplacian learning is well-posed and consistent with a continuum Laplace equation. Furthermore, in the well-posed setting we prove quantitative error estimates of $O(\varepsilon\beta^{-1/2})$ for the difference between the solutions of the discrete problem and continuum PDE, up to logarithmic factors. We also study $p$-Laplacian regularization and show the same degeneracy result when $\beta \ll \varepsilon^p$. The proofs of our well-posedness results use the random walk interpretation of Laplacian learning and PDE arguments, while the proofs of the ill-posedness results use $\Gamma$-convergence tools from the calculus of variations. We also present numerical results on synthetic and real data to illustrate our results.

We consider dynamics driven by interaction energies on graphs. We introduce graph analogues of the continuum nonlocal-interaction equation and interpret them as gradient flows with respect to a graph Wasserstein distance. The particular Wasserstein distance we consider arises from the graph analogue of the Benamou-Brenier formulation where the graph continuity equation uses an upwind interpolation to define the density along the edges. While this approach has both theoretical and computational advantages, the resulting distance is only a quasi-metric. We investigate this quasi-metric both on graphs and on more general structures where the set of "vertices" is an arbitrary positive measure. We call the resulting gradient flow of the nonlocal-interaction energy the nonlocal nonlocal-interaction equation (NL$^2$IE). We develop the existence theory for the solutions of the NL$^2$IE as curves of maximal slope with respect to the upwind Wasserstein quasi-metric. Furthermore, we show that the solutions of the NL$^2$IE on graphs converge as the empirical measures of the set of vertices converge weakly, which establishes a valuable discrete-to-continuum convergence result., Comment: 46 pages. Minor revision with improved presentation and fixed typos

Scalings in which the graph Laplacian approaches a differential operator in the large graph limit are used to develop understanding of a number of algorithms for semi-supervised learning; in particular the extension, to this graph setting, of the probit algorithm, level set and kriging methods, are studied. Both optimization and Bayesian approaches are considered, based around a regularizing quadratic form found from an affine transformation of the Laplacian, raised to a, possibly fractional, exponent. Conditions on the parameters defining this quadratic form are identified under which well-defined limiting continuum analogues of the optimization and Bayesian semi-supervised learning problems may be found, thereby shedding light on the design of algorithms in the large graph setting. The large graph limits of the optimization formulations are tackled through $\Gamma-$convergence, using the recently introduced $TL^p$ metric. The small labelling noise limits of the Bayesian formulations are also identified, and contrasted with pre-existing harmonic function approaches to the problem.

We investigate a family of regression problems in a semi-supervised setting. The task is to assign real-valued labels to a set of $n$ sample points, provided a small training subset of $N$ labeled points. A goal of semi-supervised learning is to take advantage of the (geometric) structure provided by the large number of unlabeled data when assigning labels. We consider random geometric graphs, with connection radius $\epsilon(n)$, to represent the geometry of the data set. Functionals which model the task reward the regularity of the estimator function and impose or reward the agreement with the training data. Here we consider the discrete $p$-Laplacian regularization. We investigate asymptotic behavior when the number of unlabeled points increases, while the number of training points remains fixed. We uncover a delicate interplay between the regularizing nature of the functionals considered and the nonlocality inherent to the graph constructions. We rigorously obtain almost optimal ranges on the scaling of $\epsilon(n)$ for the asymptotic consistency to hold. We prove that the minimizers of the discrete functionals in random setting converge uniformly to the desired continuum limit. Furthermore we discover that for the standard model used there is a restrictive upper bound on how quickly $\epsilon(n)$ must converge to zero as $n \to \infty$. We introduce a new model which is as simple as the original model, but overcomes this restriction.

Transport based distances, such as the Wasserstein distance and earth mover's distance, have been shown to be an effective tool in signal and image analysis. The success of transport based distances is in part due to their Lagrangian nature which allows it to capture the important variations in many signal classes. However these distances require the signal to be nonnegative and normalized. Furthermore, the signals are considered as measures and compared by redistributing (transporting) them, which does not directly take into account the signal intensity. Here we study a transport-based distance, called the $TL^p$ distance, that combines Lagrangian and intensity modelling and is directly applicable to general, non-positive and multi-channelled signals. The framework allows the application of existing numerical methods. We give an overview of the basic properties of this distance and applications to classification, with multi-channelled, non-positive one and two-dimensional signals, and color transfer.

Transport-based techniques for signal and data analysis have received increased attention recently. Given their abilities to provide accurate generative models for signal intensities and other data distributions, they have been used in a variety of applications including content-based retrieval, cancer detection, image super-resolution, and statistical machine learning, to name a few, and shown to produce state of the art in several applications. Moreover, the geometric characteristics of transport-related metrics have inspired new kinds of algorithms for interpreting the meaning of data distributions. Here we provide an overview of the mathematical underpinnings of mass transport-related methods, including numerical implementation, as well as a review, with demonstrations, of several applications.

We study the problem of finding the one-dimensional structure in a given data set. In other words we consider ways to approximate a given measure (data) by curves. We consider an objective functional whose minimizers are a regularization of principal curves and introduce a new functional which allows for multiple curves. We prove the existence of minimizers and establish their basic properties. We develop an efficient algorithm for obtaining (near) minimizers of the functional. While both of the functionals used are nonconvex, we argue that enlarging the configuration space to allow for multiple curves leads to a simpler energy landscape with fewer undesirable (high-energy) local minima. Furthermore we note that the approach proposed is able to find the one-dimensional structure even for data with considerable amount of noise.

This paper establishes the consistency of spectral approaches to data clustering. We consider clustering of point clouds obtained as samples of a ground-truth measure. A graph representing the point cloud is obtained by assigning weights to edges based on the distance between the points they connect. We investigate the spectral convergence of both unnormalized and normalized graph Laplacians towards the appropriate operators in the continuum domain. We obtain sharp conditions on how the connectivity radius can be scaled with respect to the number of sample points for the spectral convergence to hold. We also show that the discrete clusters obtained via spectral clustering converge towards a continuum partition of the ground truth measure. Such continuum partition minimizes a functional describing the continuum analogue of the graph-based spectral partitioning. Our approach, based on variational convergence, is general and flexible.