1. Ancient Mitogenomes Reveal the Evolutionary History and Biogeography of Sloths
- Author
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Dirk Hackenberger, Gillian C. Gibb, Melanie Kuch, Frédéric Delsuc, Emil Karpinski, H. Gregory McDonald, James I. Mead, Paul Szpak, Lionel Hautier, Hendrik N. Poinar, Ross D. E. MacPhee, Guillaume Billet, Jorge G. Martínez, Institut des Sciences de l'Evolution de Montpellier (UMR ISEM), École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre National de la Recherche Scientifique (CNRS)-Institut de recherche pour le développement [IRD] : UR226, McMaster University [Hamilton, Ontario], Trent University, American Museum of Natural History (AMNH), Muséum national d'Histoire naturelle (MNHN), Centre de Recherche en Paléontologie - Paris (CR2P), Muséum national d'Histoire naturelle (MNHN)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), ANR-10-LABX-0025,CEBA,CEnter of the study of Biodiversity in Amazonia(2010), ANR-10-LABX-0004,CeMEB,Mediterranean Center for Environment and Biodiversity(2010), ANR-17-CE31-0009,GAARAnti,Pont terrestre 'GAARlandia' vs voies de dispersion à travers les Petites Antilles–Couplage entre dynamique de la subduction et processus de l'évolution des espèces dans le domaine des Caraïbes.(2017), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-École Pratique des Hautes Études (EPHE), and Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Institut de recherche pour le développement [IRD] : UR226-Centre National de la Recherche Scientifique (CNRS)
- Subjects
0301 basic medicine ,[SDV]Life Sciences [q-bio] ,purl.org/becyt/ford/1 [https] ,0302 clinical medicine ,[SDE.BE.BIOS]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.bios ,CONVERGENCE ,GAARLANDIA ,Megalonyx ,Phylogeny ,biology ,Ancient DNA ,Acratocnus ,Sloth ,GAARlandia ,Biological Evolution ,Phylogenetics ,Extinct sloths ,Sister group ,Biogeography ,EXTINCT SLOTHS ,Molecular dating ,General Agricultural and Biological Sciences ,Morphology ,MITOGENOMICS ,[SDE.BE.PAL]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.pal ,Nothrotheriops ,Mylodon ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,PHYLOGENETICS ,biology.animal ,Animals ,ANCIENT DNA ,MOLECULAR DATING ,14. Life underwater ,DNA, Ancient ,purl.org/becyt/ford/1.6 [https] ,mitogenomics ,convergence ,15. Life on land ,biology.organism_classification ,Sloths ,Evolutionary radiation ,030104 developmental biology ,Evolutionary biology ,Genome, Mitochondrial ,Megatherium ,MORPHOLOGY ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Animal Distribution ,030217 neurology & neurosurgery ,BIOGEOGRAPHY - Abstract
Living sloths represent two distinct lineages of small-sized mammals that independently evolved arboreality from terrestrial ancestors. The six extant species are the survivors of an evolutionary radiation marked by the extinction of large terrestrial forms at the end of the Quaternary. Until now, sloth evolutionary history has mainly been reconstructed from phylogenetic analyses of morphological characters. Here, we used ancient DNA methods to successfully sequence 10 extinct sloth mitogenomes encompassing all major lineages. This includes the iconic continental ground sloths Megatherium, Megalonyx, Mylodon, and Nothrotheriops and the smaller endemic Caribbean sloths Parocnus and Acratocnus. Phylogenetic analyses identify eight distinct lineages grouped in three well-supported clades, whose interrelationships are markedly incongruent with the currently accepted morphological topology. We show that recently extinct Caribbean sloths have a single origin but comprise two highly divergent lineages that are not directly related to living two-fingered sloths, which instead group with Mylodon. Moreover, living three-fingered sloths do not represent the sister group to all other sloths but are nested within a clade of extinct ground sloths including Megatherium, Megalonyx, and Nothrotheriops. Molecular dating also reveals that the eight newly recognized sloth families all originated between 36 and 28 million years ago (mya). The early divergence of recently extinct Caribbean sloths around 35 mya is consistent with the debated GAARlandia hypothesis postulating the existence at that time of a biogeographic connection between northern South America and the Greater Antilles. This new molecular phylogeny has major implications for reinterpreting sloth morphological evolution, biogeography, and diversification history. Extant sloths are the survivors of an evolutionary radiation marked by the extinction of large terrestrial forms of the Ice Age. By sequencing ten mitogenomes from extinct sloths, Delsuc et al. present a new molecular phylogeny revealing widespread morphological convergence with major implications for reinterpreting sloth evolutionary history. Fil: Delsuc, Frédéric. Université Montpellier II; Francia Fil: Kuch, Melanie. Mcmaster Ancient Dna Centre; Canadá Fil: Gibb, Gillian C.. Massey University; Nueva Zelanda. Université Montpellier II; Francia Fil: Karpinski, Emil. Mcmaster Ancient Dna Centre; Canadá. Mcmaster University; Canadá Fil: Hackenberger, Dirk. Mcmaster Ancient Dna Centre; Canadá Fil: Szpak, Paul. Trent University; Canadá Fil: Martinez, Jorge Gabriel. Universidad Nacional de Tucumán; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucumán. Instituto Superior de Estudios Sociales. Universidad Nacional de Tucumán. Instituto Superior de Estudios Sociales; Argentina Fil: Mead, Jim I.. East Tennessee State University; Estados Unidos Fil: McDonald, H. Gregory. Bureau of Land Management; Estados Unidos Fil: Macphee, Ross Douglas Earle. American Museum of Natural History; Estados Unidos Fil: Billet, Guillaume. Université Pierre et Marie Curie; Francia Fil: Hautier, Lionel. Natural History Museum; Reino Unido. Université Montpellier II; Francia Fil: Poinar, Hendrik N.. Mcmaster Ancient Dna Centre; Canadá
- Published
- 2019