1. Discovery of dark pH-dependent H+ migration in a [NiFe]-hydrogenase and its mechanistic relevance: mobilizing the hydrido ligand of the Ni-C intermediate
- Author
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Murphy, BJ, Hidalgo, R, Roessler, MM, Evans, RM, Ash, PA, Myers, WK, Vincent, KA, and Armstrong, FA
- Subjects
Photolysis ,Nitrogen ,Escherichia coli Proteins ,Electron Spin Resonance Spectroscopy ,Temperature ,Electrons ,Hydrogen-Ion Concentration ,Ligands ,Article ,Carbon ,Oxygen ,Hydrogenase ,Metals ,Nickel ,Catalytic Domain ,Escherichia coli ,Protons ,Oxidation-Reduction ,Hydrogen - Abstract
Despite extensive studies on [NiFe]-hydrogenases, the mechanism by which these enzymes produce and activate H2so efficiently remains unclear. A well-known EPR-active state produced under H2and known as Ni-C is assigned as a NiIII–FeIIspecies with a hydrido ligand in the bridging position between the two metals. It has long been known that low-temperature photolysis of Ni-C yields distinctive EPR-active states, collectively termed Ni-L, that are attributed to migration of the bridging-H species as a proton; however, Ni-L has mainly been regarded as an artifact with no mechanistic relevance. It is now demonstrated, based on EPR and infrared spectroscopic studies, that the Ni-C to Ni-L interconversion in Hydrogenase-1 (Hyd-1) fromEscherichia coliis a pH-dependent process that proceeds readily in the dark—proton migration from Ni-C being favored as the pH is increased. The persistence of Ni-L in Hyd-1 must relate to unassigned differences in proton affinities of metal and adjacent amino acid sites, although the unusually high reduction potentials of the adjacent Fe–S centers in this O2-tolerant hydrogenase might also be a contributory factor, impeding elementary electron transfer off the [NiFe] site after proton departure. The results provide compelling evidence that Ni-L is a true, albeit elusive, catalytic intermediate of [NiFe]-hydrogenases.
- Published
- 2021