67 results on '"Jaroslav Brůžek"'
Search Results
2. Peptide analysis of tooth enamel – A sex estimation tool for archaeological, anthropological, or forensic research
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Ivan Mikšík, Marine Morvan, and Jaroslav Brůžek
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Filtration and Separation ,Analytical Chemistry - Published
- 2023
3. Undertaking Sex Assessment of Human Remains within Cultural Heritage: Applicability of Minimally-Invasive Methods for Proteomic Sex Estimation from Enamel Peptides
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Jaroslav Brůžek, Ivan Mikšík, Anežka Pilmann Kotěrová, Marine Morvan, Sylva Drtikolová Kaupová, Fréderic Santos, Alžběta Danielisová, Eliška Zazvonilová, Bruno Maureille, and Petr Velemínský
- Published
- 2023
4. The Importance of Historical Medical Records Review in the Interpretation of Dry Bone Lesions on Identified Skeletal Remains
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Iva Grossová, Jan Cvrček, Vítězslav Kuželka, Petr Velemínský, Viktor Chrobok, and Jaroslav Brůžek
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Male ,medicine.medical_specialty ,History ,Interpretation (philosophy) ,Medical record ,Reproducibility of Results ,Bone and Bones ,Medical Records ,Body Remains ,Pathology and Forensic Medicine ,Bone lesion ,Family medicine ,Credibility ,medicine ,Humans ,Pathological ,Historical record - Abstract
The examination of documented skeletal remains provides an exceptional opportunity for biohistorical research to answer questions about an individual's life and death. Research in this area also makes it possible to assess the reliability of historical records from the period of interest, which is often the subject of discussion, especially in cases of historically known individuals. The remains of K.B.C. (1895-1940), a prominent local landowner and politician, were exhumed because of the repair of a family tomb in Jilovistě, Czech Republic. The aim of this study was to analyze pathological changes in his bones and to interpret these by comparing them with the results of a historical medical records review of private family and public archives regarding his diseases and death, thus verifying their credibility. Morphological and X-ray examinations of the bones revealed several serious pathological changes, whose presence fully corresponded to the studied documents. This showed the records' reliability, and it was thus possible to accurately interpret the lesions found. The results demonstrated the need for interdisciplinary collaboration in the analysis of such cases, including the assistance of the living descendants of the studied individuals, if possible.
- Published
- 2021
5. Kinship and the familial occurrence of skeletal developmental anomalies in the noble Swéerts-Sporck family (Bohemia, 17th to 20th centuries)
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Jan Cvrček, Tomáš Jor, Jaroslav Brůžek, Ján Dupej, and Petr Velemínský
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Archeology ,Skull ,Ribs ,Biology ,Body Remains ,Pathology and Forensic Medicine ,Knowledge ,Similarity (network science) ,Evolutionary biology ,Kinship ,Frontal Sinus ,Humans ,Degree of similarity ,Inbreeding - Abstract
Objective To determine the degree of similarity of biologically related individuals according to the occurrence of skeletal developmental anomalies (SDA), to see whether these anomalies reflect documented biological relationships. Material and methods The sample consists of the skeletal remains of seven members of the noble Sweerts-Sporck family from the 17th-20th centuries. Eighty-nine SDA were examined using morphological assessment, X-ray and CT. The degree of similarity was calculated using a similarity coefficient ( Cvrcek et al., 2018 ). Results There were three shared SDA in the sample (cranial shift at the C-T border, cervical ribs, hypoplasia of rib 12), and another fifteen individual SDA were reported. The degree of similarity between individuals supports their documented relationships. The greatest similarity was found in closely related individuals such as father/son or siblings, and the least between unrelated individuals. Conclusions SDA can be used as a supportive tool for detecting family relationships. The results correspond to the conclusions of earlier analyses of non-metric traits and frontal sinuses in the same sample: the smaller the biological distance between individuals, the greater the degree of their similarity. Significance Using unique human skeletal collections, this communication contributes to the expansion of knowledge about the familial occurrence of SDA. Limitations The small number of individuals limits the use of statistical approaches. Suggestions for further research The results call for research on this topic using a larger sample with known genealogical data and the same approaches, to confirm our conclusions.
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- 2021
6. Skeletal age-at-death estimation from the acetabulum based on a convolutional neural network
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Zdeněk Buk, Anežka Pilmann Kotěrová, Jaroslav Brůžek, and Jana Velemínská
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- 2022
7. Familial occurrence of skeletal developmental anomalies as a reflection of biological relationships in a genealogically documented Central European sample (19th to 20th centuries)
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Martin Horák, Petr Velemínský, Tomáš Jor, Ondřej Naňka, Jaroslav Brůžek, Jan Cvrček, Vítězslav Kuželka, and Ján Dupej
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0301 basic medicine ,Histology ,Population ,Consanguinity ,medicine.disease_cause ,03 medical and health sciences ,0302 clinical medicine ,Similarity (network science) ,biology.animal ,Heredity ,medicine ,Humans ,Child ,education ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,education.field_of_study ,Anteater ,biology ,Temporal Bone ,Grandparent ,Cell Biology ,Aplasia ,medicine.disease ,Body Remains ,030104 developmental biology ,Cervical Vertebrae ,Anatomy ,Inbreeding ,Neck ,030217 neurology & neurosurgery ,Developmental Biology ,Demography - Abstract
Skeletal developmental anomalies (SDA) are a subject of constant interest across scientific disciplines, but still mostly as isolates and curiosities. The aim of this study was to find out to what extent the occurrence of SDA reflects documented biological relationships. The skeletal remains of 34 individuals with known genealogical data were available, members of one family over four generations (19th to 20th centuries, Bohemia, Czech Republic), including some inbred individuals. The occurrence of 89 SDA was assessed on the basis of scopic morphological evaluation and X-ray and CT examinations. The degree of similarity between individuals was calculated using a "similarity coefficient" (SC). A linear model was used to test the relationship between positive values of the SC and the relatedness of biologically related individuals. Simultaneously, based on population frequencies of the evaluated anomalies, those that could be considered familial were recorded. A statistically significant relationship between morphological similarity and the biological distance between individuals was found. The greatest similarity was found among close relatives such as parents and children, siblings, or grandparents and grandchildren. The effect of increased consanguinity on the occurrence of anomalies was not confirmed, however. Seventeen SDA shared by closely related individuals were found in the sample, supporting the documented family relationships among them. Eleven of these were selected as possibly familial, but only five were statistically significant: an elongated styloid process, a cervical block vertebrae (arch, facet joints), hamate hamulus aplasia, anteater nose sign, and incomplete fusion of the S1 spinous process. There were also 28 cases of individual occurrences of 17 different SDA, without connection to the documented relationships between individuals.
- Published
- 2021
8. Early life histories of Great Moravian children – carbon and nitrogen isotopic analysis of dentine serial sections from the Early Medieval population of Mikulčice (9th-10th centuries AD, Czechia)
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Sylva Drtikolová Kaupová, Jaroslav Brůžek, Jiří Hadrava, Ivan Mikšík, Marine Morvan, Lumír Poláček, Lenka Půtová, and Petr Velemínský
- Abstract
In order to compare the early life experiences of different population subgroups from the Early Medieval centre of Mikulčice, carbon and nitrogen isotopic values were measured in dentine serial sections from the first permanent molar of 78 individuals. Age-at-death, sex (estimated in subadults with the help of proteomics) and socio-economic status were considered as explicative variables. Average values of both nitrogen and carbon maximal isotopic offset within the isotopic profile were higher than the recommended range for weaning under healthy circumstances: 3.1 ± 0.8‰ for Δ15Nmax and 1.6 ± 0.8‰ for Δ13Cmax. Individuals who died during the first decade of life showed earlier ages at the final smoothing of the nitrogen isotopic curve (suggesting complete weaning) than older individuals. Most individuals (n = 43) showed positive covariance between δ15N and δ13C values during the period of breastfeeding. The average δ15N values from the post-weaning period were similar to those of bone, while post-weaning δ13C values were significantly higher. Though an increased Δ15Nmax suggests a common presence of physiological stress, the intra-population comparison of early life experiences does not suggest that individuals who died during their first decade experienced greater levels of environmental stress during infancy. The predominance of positive covariance between carbon and nitrogen isotopic values during the breastfeeding period, together with an increased Δ13Cmax and increased post-weaning δ13C, suggest that millet was either a part of a special diet preferred during lactation or was introduced as a first dietary supplement.
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- 2022
9. The computational age-at-death estimation from 3D surface models of the adult pubic symphysis using data mining methods
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Anežka Kotěrová, Michal Štepanovský, Zdeněk Buk, Jaroslav Brůžek, Nawaporn Techataweewan, and Jana Velemínská
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Adult ,bones ,Multidisciplinary ,laser scans ,Pubic Symphysis ,sample ,suchey-brooks ,transition analysis ,Imaging, Three-Dimensional ,human remains ,Age Determination by Skeleton ,skeleton ,Data Mining ,Forensic Anthropology ,Humans ,auricular surface ,ilium - Abstract
Age-at-death estimation of adult skeletal remains is a key part of biological profile estimation, yet it remains problematic for several reasons. One of them may be the subjective nature of the evaluation of age-related changes, or the fact that the human eye is unable to detect all the relevant surface changes. We have several aims: (1) to validate already existing computer models for age estimation; (2) to propose our own expert system based on computational approaches to eliminate the factor of subjectivity and to use the full potential of surface changes on an articulation area; and (3) to determine what age range the pubic symphysis is useful for age estimation. A sample of 483 3D representations of the pubic symphyseal surfaces from the ossa coxae of adult individuals coming from four European (two from Portugal, one from Switzerland and Greece) and one Asian (Thailand) identified skeletal collections was used. A validation of published algorithms showed very high error in our dataset—the Mean Absolute Error (MAE) ranged from 16.2 and 25.1 years. Two completely new approaches were proposed in this paper: SASS (Simple Automated Symphyseal Surface-based) and AANNESS (Advanced Automated Neural Network-grounded Extended Symphyseal Surface-based), whose MAE values are 11.7 and 10.6 years, respectively. Lastly, it was demonstrated that our models could estimate the age-at-death using the pubic symphysis over the entire adult age range. The proposed models offer objective age estimates with low estimation error (compared to traditional visual methods) and are able to estimate age using the pubic symphysis across the entire adult age range.
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- 2022
10. The impact of using new and conventional methods for the age-at-death estimation in a Czech medieval population (Mikulčice, 9th–10th century): the relationship between age-at-death and linear enamel hypoplasia
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Eliška Zazvonilová, Petr Velemínský, and Jaroslav Brůžek
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Estimation ,Czech ,education.field_of_study ,Population ,Age at death ,General Medicine ,Enamel hypoplasia ,medicine.disease ,language.human_language ,Bayesian statistics ,Bayes' theorem ,Geography ,Anthropology ,Linear regression ,language ,medicine ,Animal Science and Zoology ,education ,Ecology, Evolution, Behavior and Systematics ,Demography - Abstract
Recent advances in age-at-death estimation from the skeleton indicate that some of the most commonly used methods based on linear regression provide different results compared to new techniques using Bayesian statistics, and underestimate individuals over 60 years old which leads to biased prehistoric lifespans. The question is how the choice of age-at-death estimation method can influence subsequent comparisons between different populations or further analysis, such as assessment of the effect of early stress on mortality in adult individuals. The aim of our work is twofold: firstly, to test the differences between age estimation methods evaluating one indicator (the auricular surface), namely the original (Lovejoy et al. 1985), revised (Buckberry & Chamberlain 2002) and newly developed (Schmitt 2005) methods, on the Early Medieval adult population from Mikulcice - IIIrd church (Czech Republic, Central Europe). The secondary objective is to assess whether the different age distributions based on the different methods have an impact on age-dependent analyses, in this case the relationship between LEH and age-at-death. Our results showed that in the adult population from Mikulcice - IIIrd church, the original and revised methods provided different mortality profiles: the proportion of individuals older than 60 years acquired using Lovejoy's method was only 6.7%, while the newer methods increased the proportion to 26.7% (Buckberry & Chamberlain 2002) and 23.9% (Schmitt 2005). The choice of age-at-death estimation, and thus the different age distributions, also resulted in differences in the achieved age of individuals with and without stress markers, and specifically in the significance of the differences found. This finding seeks to draw attention to the fact that inconsistency in the use of different age-estimation methods can influence the results of further analyses and cause problems when comparing burial grounds.
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- 2020
11. Phenotypic diversity of skulls in the Merovingian population (Norroy‐le‐Veneur cemetery, 7th century AD, Moselle, France) in the context of Early Medieval Europe
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Petr Velemínský, Stanislav Katina, Jana Velemínská, Milan Thurzo, Jaroslav Brůžek, and Alena Šefčáková
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0303 health sciences ,Archeology ,education.field_of_study ,060101 anthropology ,media_common.quotation_subject ,Population ,Context (language use) ,06 humanities and the arts ,03 medical and health sciences ,Geography ,Anthropology ,Ethnology ,0601 history and archaeology ,education ,West europe ,030304 developmental biology ,Diversity (politics) ,media_common - Published
- 2020
12. Pig-Breeding Management in the Early Medieval Stronghold at Mikulčice (Eighth–Ninth Centuries, Czech Republic)
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Lumír Poláček, P. Limburský, Jaroslav Brůžek, Petr Velemínský, Lenka Kovačiková, and S. Drtikolová Kaupová
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Czech ,Ninth ,Archeology ,Domestic pig ,Pig breeding ,Geography ,language ,Subsistence economy ,Environmental Science (miscellaneous) ,Ancient history ,language.human_language - Abstract
The archaeozoological analysis sets point to the vital role of pigs in the subsistence economy of Early Medieval Mikulcice, an important Great Moravian centre (Czech Republic). The results of slaug...
- Published
- 2020
13. Paleodemografická interpretace kosterních souborů minulých populací: nové hodnocení raně středověkých pohřebišť u 3. a 6. kostela v Mikulčicích
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Eliška Zazvonilová, Petr Velemínský, and Jaroslav Brůžek
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Archeology - Abstract
Příspěvek v první části představuje současný stav paleodemografie minulých populací. Úskalím jakékoliv interpretace jsou problémy spolehlivého odhadu věku dožití dospělých jedinců, které dovolují exaktní klasifikaci maximálně do tří širokých věkových tříd (např. do 30 let, od 30 do 60 let a starších 60 let). Možnosti nové intepretace úmrtnostního profilu vzhledem k modelové úmrtnosti archaických populací (e0 = 25 až 35 let) podle Ledermanna jsou uvedeny na příkladech tří recentních výzkumů (Praha-Lahovice, Janíky a Diváky – Padělky nad humny). Text upozorňuje na skutečnost, že paleodemografická analýza pohřebišť se provádí s cílem identifikace demografických anomálií, nikoliv pro zjištění jakýchkoliv přímých demografických charakteristik populačního vzorku. Druhá část příspěvku se věnuje revizi pohlaví a věku dožití u jedinců dvou mikulčických pohřebišť (u 3. a 6. kostela), od jejichž prvního zpracování uplynulo půlstoletí. Naše výsledky ukázaly konzistenci výsledků odhadu pohlaví, nikoliv věku dožití. S rozvojem současných metod odhadu věku podle kostry je spojena možnost odhadu jedinců starších 60 let, které původní metody nedokázaly správně identifikovat
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- 2020
14. Current trends in methods for estimating age and sex from the adult human skeleton
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Anežka Kotěrová, Rebeka Rmoutilová, and Jaroslav Brůžek
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Anthropology - Published
- 2022
15. Entre peste et famine : caractérisation d’une crise de mortalité par l’étude de trois sépultures multiples du site de Kutná Hora – Sedlec (République tchèque, XIVe siècle)
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Filip Velímský, Petr Velemínský, Dominique Castex, Auxane de Lépinau, Hana Brzobohatá, Sacha Kacki, Jan Frolík, and Jaroslav Brůžek
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2. Zero hunger ,Cultural Studies ,non-specific stress markers ,0303 health sciences ,Archeology ,060101 anthropology ,indicateurs de stress non spécifiques ,paléodémographie ,06 humanities and the arts ,mortality crisis ,historical demography ,Peste noire ,Black Death ,03 medical and health sciences ,Anthropology ,crises de mortalité ,démographie historique ,famine ,0601 history and archaeology ,palaeodemography ,030304 developmental biology - Abstract
Les derniers siècles du Moyen Âge ont été marqués par des crises épidémiques et frumentaires récurrentes, dont certaines ont entrainé des vagues de mortalité telles qu’elles ont nécessité la création de sépultures de masse et de cimetières d’urgence. Si ces sépultures et ces ensembles funéraires ont souvent fait l’objet d’études anthropologiques, rares sont celles qui se sont appliquées à évaluer les caractéristiques paléobiologiques distinguant les deux types de crises. Le présent article explore cette question à travers l’étude anthropologique et paléopathologique de trois sépultures multiples du XIVe siècle mises au jour à Kutná Hora – Sedlec (République tchèque), que des données historiques permettent de relier soit à un épisode de famine, soit à la Peste noire. Les données acquises pour les 68 squelettes exhumés de ces tombes sont comparées à celles obtenues pour un échantillon de 284 squelettes issus d’un cimetière médiéval local (Cathédrale de Sedlec), ainsi qu’à un ensemble de données de référence documentant la mortalité par peste et par famine. Les résultats montrent des différences de composition par âge, de caractéristiques métriques et d’état sanitaire préexistant entre les deux séries tchèques. L’échantillon issu des sépultures multiples présente un profil de mortalité avant 20 ans, des valeurs pour certains indices démographiques et des caractéristiques paléopathologiques qui le rapprochent davantage des données de référence d’une mortalité par peste, ce qui conduit à privilégier l’hypothèse de sa relation avec la Peste noire. Si un diagnostic de certitude nécessitera des analyses complémentaires, cette étude fournit d’ores et déjà des indications sur les critères discriminants entre peste et famine et ouvre la voie à de futures recherches sur les épidémies et crises de subsistance du passé. The later centuries of the Middle Ages were a time of recurrent epidemics and famines, some of which caused such huge mortality that mass graves and emergency burial grounds had to be created. Several anthropological studies have investigated these graves and cemeteries, but only a few have attempted to assess the bioarchaeological features that could distinguish between these two types of crisis. Our study tackles this question through an anthropological and palaeopathological study of three 14th century mass graves at Kutná Hora – Sedlec (Czech Republic), for which historical data support a relationship with either a famine or the Black Death. Data on the 68 skeletons recovered from these graves were compared with data on 284 skeletons from a local mediaeval cemetery (Sedlec Cathedral) and with a set of reference data documenting plague and famine mortality. The results reveal differences in age structure, osteometrics and pre-existing health status between the catastrophic and attritional assemblages. The general pattern of non-adult mortality, the value of certain demographic indices and the pattern of skeletal lesions in the mass graves investigated align more closely with the reference data for plague mortality, making their link with the Black Death the most likely scenario. Although a definite diagnosis will require further analysis, this study offers the first evidence of features that might distinguish between these two types of crisis, paving the way for future research on past epidemics and famines.
- Published
- 2021
16. Far from home: A multi-analytical approach revealing the journey of an African-born individual to imperial Rome
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Marie-France Deguilloux, Kevin Salesse, Robert H. Tykot, Marie-Hélène Pemonge, Arwa Kharobi, Nina Maaranen, Jaroslav Brůžek, Vincent Balter, Dominique Castex, Maïté Rivollat, Elise Dufour, History, Archeology, Arts, Philosophy and Ethics, Multidisciplinary Archaeological Research Institute, Archéozoologie, archéobotanique : sociétés, pratiques et environnements (AASPE), Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Géologie de Lyon - Terre, Planètes, Environnement (LGL-TPE), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut national des sciences de l'Univers (INSU - CNRS)-Université Jean Monnet - Saint-Étienne (UJM)-Centre National de la Recherche Scientifique (CNRS), De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), and Université Bordeaux Montaigne (UBM)
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Archeology ,dental morphology ,[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistory ,media_common.quotation_subject ,Empire ,Ancient history ,Catacombs ,Early life ,mobility ,Roman period ,Capital (architecture) ,Forced migration ,Ancient DNA ,Geography ,Residence ,diet ,ancient DNA ,Lifeway ,stable and radiogenic isotopes ,media_common - Abstract
International audience; Rome saw its number of foreign individuals increase considerably as the empire expanded. These foreigners arrived as either free persons or slaves from the newly conquered provinces and nearfrontier zones and came to influence the whole life of the city. Yet relatively little is known about their life histories. In this study, we bring direct evidence for the first example of an African-born migrant, with an origin beyond the southern imperial border, discovered in Rome. Based on a multi-tissue sampling strategy including molar teeth and mandibular cortical bone, a multi-analytical approach including isotopic (δ 13 C, δ 15 N, δ 18 O, δ 34 S, 87 Sr/ 86 Sr), dental morphology (geometric morphometrics, nonmetric traits) and ancient DNA (mitochondrial DNA, Y chromosome) analyses allows reconstructing the journey and lifeway patterns of the individual US215/Mand1 buried in the mass grave from the catacombs of Saints Peter and Marcellinus. The successful isotopic and dental morphology analyses suggest that the individual was probably born in the vicinity of the Nile Valley or within the central Sahara Desert. Results also suggest a diachronic change of residence in the area during their early life. The way US215/Mand1 reached Rome is still hypothetical, although it seems likely that the individual could have undergone forced migration as a slave to the capital.
- Published
- 2021
17. Sex and ancestry related differences between two Central European populations determined using exocranial meshes
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Jaroslav Brůžek, Jana Velemínská, Barbora Musilová, Šárka Bejdová, and Ján Dupej
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Adult ,Male ,Support Vector Machine ,Adolescent ,Population sample ,Population ,Body size ,Biology ,White People ,Pathology and Forensic Medicine ,Machine Learning ,Young Adult ,Imaging, Three-Dimensional ,Biological profile ,Statistics ,Humans ,education ,Aged ,Czech Republic ,Principal Component Analysis ,education.field_of_study ,Skull ,Reproducibility of Results ,Middle Aged ,Sex Determination by Skeleton ,Sexual dimorphism ,Virtual anthropology ,Support vector machine ,Sex estimation ,Forensic Anthropology ,Female ,France ,Law - Abstract
Assessing sex and population affinity is an important part of the process of biologically identifying unknown human remains, and the skull is usually one of the best structures for assessing both these components of the biological profile. Population affinity is known to be a hugely important variable when estimating sex because the manifestation of sexually dimorphic traits, body size or social and behavioural habits differs across populations. Therefore, for forensic purposes, the estimation of ancestry is a necessary step in the identification of bone remains. The present study improves on the results of a previously developed virtual method using the exocranial surface for sex estimation and assessing population affinity. The ability to assess these components of the biological profile was successfully tested on 208 individuals from two recent European populations. The original classifier was based on geometric morphometric analyses (CPD-DCA, PCA, SVM) and was able to assess the sex of individuals belonging to one French population with an accuracy exceeding 90 % Musilová et al. [1]. To improve the reliability of the method, the Czech population sample was added to the dataset, yielding the highest accuracy of 96.2 %; using the combined dataset, the reliability of the method was 91.8 %. Secondly, we used the same method utilizing inter-population differences to classify individuals based on the shape of the skull. The greatest accuracy rate was 92.8 %, which makes our method a promising tool for sex estimation and assessing population affinity.
- Published
- 2019
18. Exhumation of Danish astronomer Tycho Brahe: verification of identity and determination of cause of death
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Sylva Kaupová, Jaroslav Brůžek, Petr Velemínský, Vítězslav Kuželka, Petra Havelková, and Miluše Dobisíková
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Danish ,Astronomer ,History ,Identity (philosophy) ,media_common.quotation_subject ,language ,The arts ,Genealogy ,language.human_language ,Cause of death ,media_common - Abstract
Tycho Brahe, noted Danish astronomer and founder of modern astronomy died in Prague in 1691, at the age of 54, and was buried in the Church of the Virgin Mary before Týn. In 2010, at the request of Danish authorities, his remains were exhumed and an investigation into the cause of his death was undertaken, with an aim to addressing speculations of him having been poisoned. This report contains detailed information on the process of the exhumation and results of the subsequent investigation. An anthropological analysis confirmed the authenticity of the remains, that they are actually those of Tycho Brahe, and confirmed the results of an earlier exhumation, done in 1901. Physical chemistry analysis was unable to confirm a lethal or sub-lethal dose of heavy metal poison (Hg). A detailed paleopathological analysis of the skeleton confirmed that Brahe suffered from DISH (diffuse idiopathic skeletal hyperostosis), which attends Type II diabetes, high blood pressure and obesity (the metabolic syndrome). From period documents describing Tycho Brahe’s lifestyle and his last days, it seems likely that he died of complications resulting from these conditions, today described as diseases of affluence, also referred to as “Western disease”.
- Published
- 2019
19. A time of change: dietary reconstruction of the Merovingian cemetery of Norroy-le-Veneur, France
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Sylva Kaupová, Zdeněk Vytlačil, Arnaud Lefebvre, Jaroslav Brůžek, and Petr Velemínský
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Adult ,010506 paleontology ,Range (biology) ,Fauna ,Population ,01 natural sciences ,Nobility ,Animals ,Humans ,Cemeteries ,0601 history and archaeology ,education ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,Isotope analysis ,Carbon Isotopes ,education.field_of_study ,Nitrogen Isotopes ,060102 archaeology ,δ13C ,06 humanities and the arts ,General Medicine ,History, Medieval ,Diet ,Geography ,Anthropology ,Ethnology ,Animal Science and Zoology ,Collagen ,France ,Social status ,Chronology - Abstract
The aim of this work was to analyse the diet of a Merovingian population sample of 80 individuals buried at Norroy-le-Veneur, France, with regard to their social status and chronology. A carbon and nitrogen stable isotope analysis of human adult bone collagen and related fauna from the same cemetery showed a diet based primarily on C3 plants, supplemented with animal protein in a range comparable to other contemporary sites. No significant contribution of C4 plants (e.g. millet) or marine-derived protein was detected. In terms of socio-economic stratification, individuals buried with rich grave good assemblages formed a narrow group with a significantly higher mean of δ13C than low-ranking individuals. We argue that this may represent a step in the gradual formation of the dietary exclusivity of Frankish elites, following a progressive rise in power of the Merovingian nobility. Also, during the timespan of the cemetery there was a population-wide decrease of 0.3 ‰ in the mean value of δ13C. The role of the Christian conversion of the population is questioned, but another factor influencing diet might have played a role.
- Published
- 2018
20. A genome sequence from a modern human skull over 45,000 years old from Zlatý kůň in Czechia
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Marco Mattonai, Kay Prüfer, Petr Velemínský, Johannes Krause, Jaroslav Brůžek, Thomas Higham, He Yu, Maria A. Spyrou, Alexander Stoessel, Cosimo Posth, Erika Ribechini, Thibaut Devièse, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology [Leipzig], Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Max Planck Institute for the Science of Human History (MPI-SHH), Max-Planck-Gesellschaft, University of Oxford [Oxford], Centre européen de recherche et d'enseignement des géosciences de l'environnement (CEREGE), Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Collège de France (CdF (institution))-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Pisa - Università di Pisa, Department of Anthropology, Národní muzeum, Max Planck SocietyFoundation CELLEXEuropean Research Council (ERC)European Commission324139UK Research & Innovation (UKRI)Natural Environment Research Council (NERC)Ministry of Culture of the Czech RepublicDKRVO 2019-2023/7.I.c00023272, and University of Oxford
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Neanderthal ,[SDV]Life Sciences [q-bio] ,Population ,Evolutionary biology ,Genome ,Article ,Evolutionary genetics ,03 medical and health sciences ,Middle East ,0302 clinical medicine ,biology.animal ,Humans ,Africa ,Czech Republic ,Europe ,Female ,Infant, Newborn ,Siberia ,Skull ,education ,Ecology, Evolution, Behavior and Systematics ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,Whole genome sequencing ,0303 health sciences ,education.field_of_study ,Ecology ,biology ,Human evolutionary genetics ,Infant ,Newborn ,Geography ,Homo sapiens ,Biological dispersal ,Human genome ,030217 neurology & neurosurgery - Abstract
Modern humans expanded into Eurasia more than 40,000 years ago following their dispersal out of Africa. These Eurasians carried ~2–3% Neanderthal ancestry in their genomes, originating from admixture with Neanderthals that took place sometime between 50,000 and 60,000 years ago, probably in the Middle East. In Europe, the modern human expansion preceded the disappearance of Neanderthals from the fossil record by 3,000–5,000 years. The genetic makeup of the first Europeans who colonized the continent more than 40,000 years ago remains poorly understood since few specimens have been studied. Here, we analyse a genome generated from the skull of a female individual from Zlatý kůň, Czechia. We found that she belonged to a population that appears to have contributed genetically neither to later Europeans nor to Asians. Her genome carries ~3% Neanderthal ancestry, similar to those of other Upper Palaeolithic hunter-gatherers. However, the lengths of the Neanderthal segments are longer than those observed in the currently oldest modern human genome of the ~45,000-year-old Ust’-Ishim individual from Siberia, suggesting that this individual from Zlatý kůň is one of the earliest Eurasian inhabitants following the expansion out of Africa., The authors present the genome sequence of a >45,000-year-old female Homo sapiens individual from the site of Zlatý kůň, Czechia. Although radiometric dating of the human remains was inconclusive, the authors were able to use molecular methods to demonstrate that she was probably among the earliest Eurasian inhabitants following expansion out of Africa.
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- 2021
21. On the diet of Tycho Brahe and his wife: did they consume fish from stagnant pools?
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Kaare Lund Rasmussen, Johannes van der Plicht, Sylva Kaupová, Jan Kameník, Jens Vellev, Vladimír Havránek, Jaroslav Brůžek, Petr Velemínský, Jan Kučera, Jiří Smolík, and Isotope Research
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Archeology ,lcsh:Fine Arts ,media_common.quotation_subject ,Kirsten Jørgensdatter ,lcsh:Analytical chemistry ,Zoology ,Conservation ,01 natural sciences ,law.invention ,Reservoir effect ,law ,Wife ,0601 history and archaeology ,Radiocarbon dating ,13C ,media_common ,lcsh:QD71-142 ,060102 archaeology ,biology ,Tycho Brahe ,15N ,010401 analytical chemistry ,06 humanities and the arts ,biology.organism_classification ,Protein intake ,Radiocarbon ,0104 chemical sciences ,Diet ,Freshwater fish ,%22">Fish ,lcsh:N - Abstract
Radiocarbon dating has been performed on cortical femoral tissue samples from Tycho Brahe (1546–1601) and his wife Kirsten Barbara Jørgensdatter (1549–1604). No discernible reservoir effect has been observed in either skeleton. This combined with unusually high δ15N values and seemingly terrestrial δ13C values, makes us suggest that a large fraction of their protein intake came from freshwater fish raised in stagnant pools.
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- 2020
22. Age-related differences in cranial sexual dimorphism in contemporary Europe
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Jaroslav Brůžek, Barbora Suchá, Šárka Bejdová, Nikola Fleischmannová, Jana Velemínská, Ján Dupej, and Anežka Kotěrová
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Senescence ,Adult ,Male ,Aging ,Population ,Biology ,01 natural sciences ,Pathology and Forensic Medicine ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Age related ,medicine ,Humans ,030216 legal & forensic medicine ,education ,Aged ,Czech Republic ,Morphometrics ,education.field_of_study ,Sex Characteristics ,010401 analytical chemistry ,Skull ,Middle Aged ,Sex Determination by Skeleton ,0104 chemical sciences ,Sexual dimorphism ,medicine.anatomical_structure ,Neurocranium ,Forehead ,Female ,Bone Remodeling ,France ,Tomography, X-Ray Computed ,Demography - Abstract
Biomechanical load and hormonal levels tended to change just like the soft and skeletal tissue of the elderly with age. Although aging in both sexes shared common traits, it was assumed that there would be a reduction of sexual dimorphism in aged individuals. The main goals of this study were (1) to evaluate age-related differences in cranial sexual dimorphism during senescence, (2) to determine age-related differences in female and male skulls separately, and (3) to compare skull senescence in Czech and French adult samples as discussed by Musilova et al. (Forensic Sci Int 269:70-77, 2016). The cranial surface was analyzed using coherent point drift-dense correspondence analysis. The study sample consisted of 245 CT scans of heads from recent Czech (83 males and 59 females) and French (52 males and 51 females) individuals. Virtual scans in the age range from 18 to 92 years were analyzed using geometric morphometrics. The cranial form was significantly greater in males in all age categories. After size normalization, sexual dimorphism of the frontal, occipital, and zygomatic regions tended to diminish in the elderly. Its development during aging was caused by morphological changes in both female and male skulls but secular changes must also be taken into account. The most notable aging changes were the widening of the neurocranium and the retrusion of the face, including the forehead, especially after the age of 60 in both sexes. Sexual dimorphism was similar between the Czech and French samples but its age-related differences were partially different because of the population specificity. Cranial senescence was found to degrade the accuracy of sex classification (92-94%) in the range of 2-3%.
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- 2020
23. Frontal sinus anatomy of the noble Swéerts-Sporck family and verification of their biological relationships using similarity analysis
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Petr Velemínský, Tomáš Jor, Jan Cvrček, Jaroslav Brůžek, and Rebeka Rmoutilová
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0301 basic medicine ,Male ,Histology ,Morphological similarity ,Computed tomography ,Biology ,Positive correlation ,03 medical and health sciences ,0302 clinical medicine ,Similarity (network science) ,Similarity analysis ,Ct examination ,medicine ,Humans ,Degree of similarity ,Inbreeding ,Ecology, Evolution, Behavior and Systematics ,Frontal sinus ,medicine.diagnostic_test ,Pedigree ,030104 developmental biology ,medicine.anatomical_structure ,Frontal Sinus ,Female ,Anatomy ,Tomography, X-Ray Computed ,Cartography ,030217 neurology & neurosurgery ,Biotechnology - Abstract
The evaluation of frontal sinus similarity is one way to detect biological relationships, especially in small groups, including families of historically known personalities. However, possibilities for studying this issue are currently limited. This contribution deals with the frontal sinuses of a rare osteological sample with known genealogical data, members of the noble Sweerts-Sporck family from the 17th to 20th centuries. The aim is to verify whether the frontal sinuses reflect documented family relationships. Basic dimensions of the frontal sinus such as total surface area and volume, and maximum height and width, and also morphology and anatomical features were evaluated using computed tomography scans. The portions of the frontal sinus above the "external supraorbital line" were analyzed. The degree of similarity between biologically related individuals was determined for each variable and compared with their known biological distance. The degree of similarity based on dimensions was evaluated using both the unadjusted measured data and standardized data adjusted to size. For the unadjusted dimensions, a positive correlation between morphological similarity and biological relatedness was apparent. On the other hand, no positive correlation was apparent for most of the standardized data. Only total volume showed a very weak indication of a positive trend in the standardized data, but this was weaker than in the original values. A positive quantifiable relationship between morphological patterns and biological distance is not clearly indicated. However, nonmetric features do support the documented relationships of the individuals.
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- 2020
24. A test of the Bulut et al. (2016) landmark-free method of quantifying sex differences in frontal bone roundness in a contemporary Czech sample
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Ján Dupej, Jana Velemínská, Markéta Čechová, Šárka Bejdová, and Jaroslav Brůžek
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Czech ,Adult ,Male ,Turkish population ,Support Vector Machine ,Population ,Biology ,01 natural sciences ,Pathology and Forensic Medicine ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Imaging, Three-Dimensional ,Statistics ,Genetics ,medicine ,Image Processing, Computer-Assisted ,Humans ,Computer Simulation ,030216 legal & forensic medicine ,education ,Aged ,Czech Republic ,Morphometrics ,Aged, 80 and over ,education.field_of_study ,010401 analytical chemistry ,Forensic anthropology ,Middle Aged ,Sex Determination by Skeleton ,language.human_language ,0104 chemical sciences ,Sexual dimorphism ,Skull ,Frontal bone ,medicine.anatomical_structure ,Frontal Bone ,language ,Forensic Anthropology ,Tomography, X-Ray Computed - Abstract
The skull, along with the pelvic bone, serves an important source of clues as to the sex of human skeletal remains. The frontal bone is one of the most significant sexually dimorphic structures employed in anthropological research, especially when studied by methods of virtual anthropology. For this reason, many new methods have been developed, but their utility for other populations remains to be verified. In the present study, we tested one such approach-the landmark-free method of Bulut et al. (2016) for quantifying sexually dimorphic differences in the shape of the frontal bone, developed using a sample of the Turkish population. Our study builds upon this methodology and tests its utility for the Czech population. We evaluated the shape of the male and female frontal bone using 3D morphometrics, comparing virtual models of frontal bones and corresponding software-generated spheres. To do so, we calculated the relative size of the frontal bone area deviating from the fitted sphere by less than 1 mm and used these data to estimate the sex of individuals. Using our sample of the Czech population, the method estimated the sex correctly in 72.8% of individuals. This success rate is about 5% lower than that achieved with the Turkish sample. This method is therefore not very suitable for estimating the sex of Czech individuals, especially considering the significantly greater success rates of other approaches.
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- 2020
25. Biological relationships and frontal sinus similarity in skeletal remains with known genealogical data
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Jan Cvrček, Petr Velemínský, Rebeka Rmoutilová, Markéta Čechová, Ondřej Naňka, Jaroslav Brůžek, Tomáš Jor, and Jana Velemínská
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0301 basic medicine ,Adult ,Male ,Histology ,Consanguinity ,Biology ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Similarity (network science) ,medicine ,Methods ,Humans ,Degree of similarity ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Aged ,Aged, 80 and over ,Frontal sinus ,Sex Characteristics ,Skull ,Grandparent ,Cell Biology ,Middle Aged ,Body Remains ,030104 developmental biology ,medicine.anatomical_structure ,Evolutionary biology ,Frontal Sinus ,Female ,Anatomy ,Tomography, X-Ray Computed ,Inbreeding ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Frontal sinus analysis has potential utility for detecting biologically related individuals. However, the methodological approach to its evaluation, as well as its informative value, have been questioned. The aim of this work is to introduce a new approach to evaluating the frontal sinus using the 'external supraorbital line' (ESOL) and to determine whether there are sex differences within families in frontal sinus measurements and whether frontal sinus similarity reflects known genetic relationships in both measurements and morphology. We examined the skeletal remains of 41 adult individuals (25 males, 16 females), all members of one family over four generations (19th to 20th centuries), including individuals with very close consanguinity. CT images of skulls were acquired, and both the dimensions and morphology of the frontal sinuses were analyzed using their portions above the ESOL. No significant sex differences were found within families based on frontal sinus dimensions. Significant relationships were found between biological distance and the maximum height and morphology of the frontal sinuses. The greatest degree of similarity was found among closely related individuals. Additionally, in several cases, there was a greater degree of similarity between first cousins or grandparents and their grandchildren than among siblings or parents and their children. Total surface, volume and width are not significant indicators of relatedness. Known genetic relationships are also supported by individual morphological features. Variability within families with very close consanguineous relationships was lower than within families with common degrees of consanguinity, although differences are significant only for some variables.
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- 2020
26. Advanced procedures for skull sex estimation using sexually dimorphic morphometric features
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Šárka Bejdová, Maria-Eleni Chovalopoulou, Andreas Bertsatos, and Jaroslav Brůžek
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Mastoid process ,Adult ,Male ,Computer science ,Cephalometry ,Population ,Posterior probability ,Sample (statistics) ,Pathology and Forensic Medicine ,Imaging, Three-Dimensional ,medicine ,Humans ,education ,computer.programming_language ,Aged ,Czech Republic ,Aged, 80 and over ,education.field_of_study ,Sex Characteristics ,Crania ,biology ,Greece ,business.industry ,Skull ,Pattern recognition ,Middle Aged ,biology.organism_classification ,Sex Determination by Skeleton ,Sexual dimorphism ,medicine.anatomical_structure ,GNU Octave ,Forensic Anthropology ,Female ,Artificial intelligence ,business ,computer ,Algorithms ,Software - Abstract
This paper introduces an automated method for estimating sex from cranial sex diagnostic traits by extracting and evaluating specialized morphometric features from the glabella, the supraorbital ridge, the occipital protuberance, and the mastoid process. The proposed method was developed and evaluated using two European population samples, a Czech sample comprising 170 crania reconstructed from anonymized CT scans and a Greek sample of 156 crania from the Athens Collection. It is based on a fully automatic algorithm applied on 3D models for extracting sex diagnostic morphometric features which are further processed by computer vision and machine learning algorithms. Classification accuracy was evaluated in a population specific and a population generic 2-way cross-validation scheme. Population-specific accuracy for individual morphometric features ranged from 78.5 to 96.7%, whereas population generic correct classification ranged from 71.7 to 90.8%. Combining all sex diagnostic traits in multi-feature sex estimation yielded correct classification performance in excess of 91% for the entire sample, whereas the sex of about three fourths of the sample could be determined with 100% accuracy according to posterior probability estimates. The proposed method provides an efficient and reliable way to estimate sex from cranial remains, and it offers significant advantages over existing methods. The proposed method can be readily implemented with the skullanalyzer computer program and the estimate_sex.m GNU Octave function, which are freely available under a suitable license.
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- 2020
27. Contributors
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Pascal Adalian, Bridget Algee-Hewitt, Radoslav Beňuš, Charles E.H. Berger, Soren Blau, Hans H. de Boer, Silvia Bozza, Jaroslav Brůžek, Zuzana Čaplová, Cristina Cattaneo, Catarina Coelho, Eugénia Cunha, Francisco Curate, João d’Oliveira Coelho, Oguzhan Ekizoglu, Daniel Franklin, Patrik Galeta, Julieta G. García-Donas, Richard L. Jantz, Michael N. Kalochristianakis, Elena F. Kranioti, Laura Manthey, David Navega, Efthymia Nikita, Panos Nikitas, Zuzana Obertová, Stephen D. Ousley, Grit Schüler, Minas Sifakis, Emanuele Sironi, Alistair Stewart, Petra Švábová, Franco Taroni, Mayonne van Wijk, and Tomáš Zeman
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- 2020
28. Sex estimation using continuous variables: Problems and principles of sex classification in the zone of uncertainty
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Patrik Galeta and Jaroslav Brůžek
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education.field_of_study ,Discriminant ,Discriminant function analysis ,Sex estimation ,Computer science ,Population ,Perspective (graphical) ,Statistics ,Forensic anthropology ,Context (language use) ,education ,Scientific evidence - Abstract
Sex estimation based on bone dimensions measured on a continuous scale and analyzed by discriminant function analysis (DFA) is an integral part of the corpus of forensic anthropology methods. The aim of this contribution is to provide a practical and intuitive explanation of DFA from a geometric perspective and to draw attention to three specific issues of DFA application, which when overlooked may yield a false sex diagnosis. We argue for publishing cross-validated classification accuracies only, for the application of population-specific discriminant functions that were derived from the population to which an individual of unknown sex belongs and for the avoidance of sex classification in the zone of uncertainty, where females and males cannot reliably be distinguished from each other. We suggest that following these rules is necessary for meeting the Daubert criteria for the admissibility of scientific evidence in a forensic context.
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- 2020
29. DSP: A probabilistic approach to sex estimation free from population specificity using innominate measurements
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Eugénia Cunha, Jaroslav Brůžek, Pierre Guyomarc’h, and Frédéric Santos
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education.field_of_study ,Bone preservation ,Probabilistic method ,Computer science ,Statistics ,Population ,Probabilistic logic ,Forensic anthropology ,Sample (statistics) ,Linear discriminant analysis ,education ,Reliability (statistics) - Abstract
This chapter discusses the DSP (Diagnose Sexuelle Probabiliste), a probabilistic method for sex estimation based on a dataset of 2040 innominates corresponding to the variability of human species in time and space. An independent sample was used for the validation of reliability of DSP2, and confirmed that sexual dimorphism of the pelvic region is not population-specific. The method offers some flexibility in the use of variables (a minimum of 4 out of 10 measures are needed to estimate a sex), which minimizes the problem of bone preservation. After its first publication in 2005, the DSP, which is based on Fisher's linear discriminant analysis, is now available in a free and cross-platform software. DSP2, made available in 2017, is one of the best tools for sex estimation both for bioarchaeology and forensic anthropology use, where the quantification of results is a major benefit.
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- 2020
30. Architecture of the femoral and tibial diaphyses in relation to body mass and composition: Research from whole-body CT scans of adult humans
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Frédéric Santos, Chiara Villa, Alizé Lacoste Jeanson, Jaroslav Brůžek, and Jytte Banner
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Adult ,Male ,0301 basic medicine ,Long bone ,Whole body ct ,Biology ,Fat mass ,03 medical and health sciences ,Cortical Bone ,medicine ,Humans ,0601 history and archaeology ,Femur ,Tibia ,Aged ,060101 anthropology ,Anatomy, Cross-Sectional ,Body Weight ,06 humanities and the arts ,Anatomy ,Middle Aged ,Skeleton (computer programming) ,Diaphysis ,030104 developmental biology ,medicine.anatomical_structure ,Anthropology ,Body Composition ,Female ,Cortical bone - Abstract
OBJECTIVES Recent investigations have evaluated the influence of body composition on long bones in order to overcome the limits of body mass (BM) estimation methods and eventually lead to studying nutrition in past populations. Knowing how fat mass (FM) and fat-free mass (FFM) impact the skeleton would also enhance the understanding of mobility, activity, and locomotion derived from bone architecture. We investigated the relationship between BM and composition, and the architecture of the entire tibial and femoral diaphyses in an adult sample representative of a wide range of variation in age, BM, and composition. MATERIALS AND METHODS Body composition was measured directly from 78 whole-body CT scans for which the age, sex, BM, and stature were recorded. The entire diaphyseal thickness, volume, curvature, and cross-sectional geometry parameters of both the femur and tibia were numerically extracted. RESULTS FM correlates with large portions of the femoral thickness in females only. FFM correlates with the femoral diaphysis in males but not in females. FFM correlates with the tibia architecture in both sexes, while FM is correlated in males exclusively. DISCUSSION BM and body components influence the architecture of the diaphysis of lower limb long bones in sex-specific patterns that are mostly reflected in their thickness and can be recorded, in some cases, for their strength, rigidity, and volume. Our results suggest that (1) long bone diaphyses should be thoroughly studied, as a whole, when possible; and (2) BM and body components should be accounted for when deriving activity, mobility, or locomotion patterns from cortical bone.
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- 2018
31. Spatial distribution of trace element Ca-normalized ratios in primary and permanent human tooth enamel
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Vincent Balter, Théo Tacail, Jaroslav Brůžek, Lenka Kovačiková, Laboratoire de Géologie de Lyon - Terre, Planètes, Environnement [Lyon] (LGL-TPE), Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École normale supérieure - Lyon (ENS Lyon), Laboratoire de Géologie de Lyon - Terre, Planètes, Environnement (LGL-TPE), École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Institut national des sciences de l'Univers (INSU - CNRS)-Université Jean Monnet - Saint-Étienne (UJM)-Centre National de la Recherche Scientifique (CNRS)
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Adult ,Male ,Molar ,Environmental Engineering ,chemistry.chemical_element ,Dentistry ,Tooth enamel ,010501 environmental sciences ,01 natural sciences ,stomatognathic system ,Human tooth ,medicine ,Humans ,Environmental Chemistry ,Tooth, Deciduous ,Dental Enamel ,Waste Management and Disposal ,Aged ,0105 earth and related environmental sciences ,Permanent teeth ,Laser ablation ,Enamel paint ,Chemistry ,business.industry ,010401 analytical chemistry ,Trace element ,Barium ,Transition metals ,Middle Aged ,Pollution ,Trace Elements ,0104 chemical sciences ,stomatognathic diseases ,medicine.anatomical_structure ,Strontium ,[SDU]Sciences of the Universe [physics] ,visual_art ,Dentin ,visual_art.visual_art_medium ,Calcium ,Female ,business ,Tooth - Abstract
The trace elements distribution embedded in tooth enamel offers a means to study exposure of toxicmetals and allows the reconstruction of dietary behaviors. The quantification of most of the elements with a spatial high resolution (similar to 50 mu m) is routinely achieved using laser ablation inductively coupled plasma mass spectrometry (LAICPMS). However, the lack of a comprehensive framework of trace elements distribution in enamel jeopardizes any endorsed sampling strategy using LA-ICPMS. The present work is an effort to improve our knowledge on this issue. We studied a suite of 22 sectioned teeth with known dietary history, including 12 3rd molars from 12 living individuals and 10 primary teeth from 3 living individuals. Using LA-ICPMS, we measured Ca, Cu, Zn, Ni, Sr, Ba and Pb variations along 2 or 3 rasters from cervical to occlusal enamel. Calcium concentrations are lower in primary than in permanent teeth and do not vary spatially within a tooth suggesting that enamel matures homogeneously before eruption. The Pb/Ca ratio does not vary within tooth enamel and between primary and permanent tooth enamel. The Cu/Ca and Ni/Ca ratios do not vary within tooth enamel but discriminate primary from permanent tooth enamel. The Zn/Ca ratios are higher in permanent than in primary tooth enamel, and increase up to an order of magnitude in the last hundred of microns at the enamel surface. The Sr/Ca and Ba/Ca ratios are higher in permanent than in primary tooth enamel, and decrease from the enamel-dentine junction towards outer enamel in permanent but not in primary tooth enamel. Considering the Ca-normalized intra-tooth variations of Zn, Sr and Ba, we recommend to perform laser ablation rasters along the enamel-dentine junction because this area is likely to retain most of the original and complete chemical information related to individual's life. (C) 2017 Elsevier B.V. All rights reserved.
- Published
- 2017
32. Validation and reliability of the sex estimation of the human os coxae using freely available DSP2 software for bioarchaeology and forensic anthropology
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Frédéric Santos, Jaroslav Brůžek, Pascal Murail, Bruno Dutailly, and Eugénia Cunha
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Male ,Population ,Posterior probability ,Validity ,Sample (statistics) ,Sexing ,03 medical and health sciences ,0302 clinical medicine ,Statistics ,Humans ,0601 history and archaeology ,030216 legal & forensic medicine ,Pelvic Bones ,education ,Mathematics ,education.field_of_study ,060101 anthropology ,Forensic anthropology ,06 humanities and the arts ,Sex Determination by Skeleton ,Linear discriminant analysis ,Anthropology ,Forensic Anthropology ,Female ,Anatomy ,Indeterminate ,Software - Abstract
Objectives A new tool for skeletal sex estimation based on measurements of the human os coxae is presented using skeletons from a metapopulation of identified adult individuals from twelve independent population samples. For reliable sex estimation, a posterior probability greater than 0.95 was considered to be the classification threshold: below this value, estimates are considered indeterminate. By providing free software, we aim to develop an even more disseminated method for sex estimation. Materials and Methods Ten metric variables collected from 2,040 ossa coxa of adult subjects of known sex were recorded between 1986 and 2002 (reference sample). To test both the validity and reliability, a target sample consisting of two series of adult ossa coxa of known sex (n = 623) was used. The DSP2 software (Diagnose Sexuelle Probabiliste v2) is based on Linear Discriminant Analysis, and the posterior probabilities are calculated using an R script. Results For the reference sample, any combination of four dimensions provides a correct sex estimate in at least 99% of cases. The percentage of individuals for whom sex can be estimated depends on the number of dimensions; for all ten variables it is higher than 90%. Those results are confirmed in the target sample. Discussion Our posterior probability threshold of 0.95 for sex estimate corresponds to the traditional sectioning point used in osteological studies. DSP2 software is replacing the former version that should not be used anymore. DSP2 is a robust and reliable technique for sexing adult os coxae, and is also user friendly.
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- 2017
33. Geometric morphometric and traditional methods for sex assessment using the posterior ilium
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Jana Velemínská, Jaroslav Brůžek, Rebeka Rmoutilová, and Ján Dupej
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Male ,Engineering drawing ,Sexing ,Sex assessment ,01 natural sciences ,Pathology and Forensic Medicine ,Ilium ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,030216 legal & forensic medicine ,Mathematics ,Sacroiliac joint ,Principal Component Analysis ,Chromosomes, Human, Y ,business.industry ,010401 analytical chemistry ,Pattern recognition ,Sulcus ,Sex Determination by Skeleton ,Linear discriminant analysis ,0104 chemical sciences ,Issues, ethics and legal aspects ,medicine.anatomical_structure ,Sex estimation ,Hip bone ,Metric (mathematics) ,Forensic Anthropology ,Artificial intelligence ,business - Abstract
The human hip bone is generally accepted as the most reliable bone for sex estimation in forensic and bioarchaeological disciplines. However, it is seldom completely preserved. The best preserved region is typically around the sacroiliac joint and its auricular surface; it is therefore surprising that this surface has not been involved in standard sexing methods. The aim of this study was to explore the shape and size sexual dimorphism of the auricular surface in detail and to compare its sex estimation accuracy using the geometric morphometric (GM) and traditional methodological approach. Our sample consisted of 121 specimens from 3 European osteological collections. The GM part of the study was based on 2D sliding semilandmarks that covered the outline of the auricular surface. Furthermore, several linear measurements and visual features (e.g. auricular surface elevation, postauricular sulcus) were chosen to test sex estimation accuracy using support vector machines. Concerning the GM analysis, the most notable sexual differences in the auricular surface outline relate to size. The best accuracy was achieved using form variables reaching 81.0%. Comparable accuracy (80.2%) was achieved using the metric approach, but combined with visual features the accuracy was increased to 93.4%. The GM approach was not very efficient in sexing the auricular surface outline, but the combination of visual features from the posterior ilium and metric variables of the auricular surface could be useful in sex estimation. Therefore, we provide a further testable linear discriminant equation based on this combination of variables.
- Published
- 2017
34. Impact of 3D Surface Scanning Protocols on the Os Coxae Digital Data: Implications for Sex and Age-at-death Assessment
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Rebeka Rmoutilová, Lukáš Friedl, Jaroslav Brůžek, Jana Velemínská, Vlastimil Králík, Pavel Růžička, François Marchal, Anežka Kotěrová, Czech Technical University in Prague (CTU), De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), University of West Bohemia [Plzeň ], Charles University [Prague] (CU), Anthropologie bio-culturelle, Droit, Ethique et Santé (ADES), and Aix Marseille Université (AMU)-EFS ALPES MEDITERRANEE-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Os coxae ,Male ,Computer science ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Age and sex estimation ,Laser scanner ,0302 clinical medicine ,Biological profile ,Statistics ,Validation ,030212 general & internal medicine ,Repeatability ,Accuracy ,Laser scanning ,Observer Variation ,RedLux Profiler ,RedLux profiler ,Surface scanning ,Age at death ,Forensic anthropology ,General Medicine ,Reliability ,Sex Determination by Skeleton ,Reproducibility ,Age and Sex Estimation ,Structured light technology ,Regression Analysis ,Female ,Morphology ,Laser Scanning ,Digital data ,Sex assignment ,Pathology and Forensic Medicine ,03 medical and health sciences ,Imaging, Three-Dimensional ,Age Determination by Skeleton ,Humans ,Computer Simulation ,030216 legal & forensic medicine ,Variability ,Pelvic Bones ,Structured Light Technology ,Outline analysis ,Lasers ,Os Coxae ,Biological Profile ,Forensic Anthropology ,Reconstruction ,Law ,Structured light - Abstract
The 3D imaging technologies have become of paramount importance for example in disciplines such as forensic anthropology and bioarchaeology, where they are being used more and more frequently. There are several new possibilities that they offer; for instance, the easier and faster sharing of data among institutions, the possibility of permanent documentation, or new opportunities of data analysis. An important requirement, however, is whether the data obtained from different scanning devices are comparable and whether the possible varying outputs could affect further analyses, such as the estimation of the biological profile. Therefore, we aimed to investigate two important questions: (1) whether 3D models acquired by two different scanning technologies (structured light and laser) are comparable and (2) whether the scanning equipment has an effect on the anthropological analyses, such as age-at-death estimation and sex assessment. 3D models of ossa coxa (n = 29) were acquired by laser (NextEngine) and structured light (HP 3D Structured Light Scanner PRO 2) scanners. The resulting 3D models from both scanners were subjected to age-at-death analyses (via the quantitative method of Stoyanova et al., 2017) and sex analyses (via Diagnose Sexuelle Probabiliste 2 of Brůžek et al., 2017). Furthermore, high quality scans of a small sample (n = 5) of pubic symphyseal surfaces with the RedLux Profiler device were acquired as reference surfaces to which the outputs from both scanners were compared. Small deviations between surfaces were more evident in more rugged surfaces (in areas of depression and protrusion). Even though small differences from the reference surfaces were found, they did not have a significant effect on the age and sex estimates. It never resulted in the opposite sex assignment, and no significant differences were observed between age estimates (with the exception of those with the TPS/BE model). Charles University Grant Agency [642218] IRN Bipedal Equilibrium, CNRS, France info:eu-repo/semantics/publishedVersion
- Published
- 2019
35. The impact of using new and conventional methods for the age-at-death estimation in a Czech medieval population (Mikulčice, 9
- Author
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Eliška, Zazvonilová, Petr, Velemínský, and Jaroslav, Brůžek
- Subjects
Adult ,Europe ,Age Determination by Skeleton ,Humans ,Bayes Theorem ,Dental Enamel Hypoplasia ,Middle Aged ,Anthropology, Physical ,Czech Republic - Abstract
Recent advances in age-at-death estimation from the skeleton indicate that some of the most commonly used methods based on linear regression provide different results compared to new techniques using Bayesian statistics, and underestimate individuals over 60 years old which leads to biased prehistoric lifespans. The question is how the choice of age-at-death estimation method can influence subsequent comparisons between different populations or further analysis, such as assessment of the effect of early stress on mortality in adult individuals. The aim of our work is twofold: firstly, to test the differences between age estimation methods evaluating one indicator (the auricular surface), namely the original (Lovejoy et al. 1985), revised (BuckberryChamberlain 2002) and newly developed (Schmitt 2005) methods, on the Early Medieval adult population from Mikulčice - III
- Published
- 2019
36. Early medieval diet in childhood and adulthood and its reflection in the dental health of a Central European population (Mikulčice, 9
- Author
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Michaela, Jílková, Sylva, Kaupová, Alena, Černíková, Lumír, Poláček, Jaroslav, Brůžek, and Petr, Velemínský
- Subjects
Adult ,Adolescent ,Animal Proteins, Dietary ,Humans ,Oral Health ,Tooth Wear ,Dental Caries ,Child ,Plant Proteins, Dietary ,History, Medieval ,Czech Republic ,Diet - Abstract
The aim of this study is to provide a detailed view of dental health in relationship to the diet of the Great Moravian population, with emphasis on childhood diet.We studied skeletal samples of the early medieval population of the Mikulčice agglomeration (Czech Republic) originating from the cemetery of the church VI (91 adults). Stable isotope analysis of carbon and nitrogen (intra-individual sampling - tooth and bone) was performed on this material, and dental characteristics (carious lesions, intensity of caries (I-CE), dental wear, linear enamel hypoplasia) evaluated.Isotopic signals obtained from tooth and bone samples of the same individuals differ significantly. Tooth samples show higher δWe provide the first direct information about the diet of the juvenile part of the Great Moravian population from Mikulčice. The diet of children differed from the diet of adults. Children consumed more millet and less animal protein than adults. The social stratification of this population was obvious in dietary composition from childhood. Elites consumed more animal proteins than non-elite individuals. Tooth decay was related to relative consumption of plant and animal proteins. Greater dental wear is related to a diet based on C3 plants. There was no significant connection between diet composition and the formation of enamel hypoplasia.
- Published
- 2019
37. An isotopic case study of individuals with syphilis from the pathological-anatomical reference collection of the National Museum in Prague (Czech Republic, 19th century A.D.)
- Author
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Kevin Salesse, Vítězslav Kuželka, Petr Velemínský, Sylva Kaupová, Jaroslav Brůžek, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), History, Archeology, Arts, Philosophy and Ethics, and Multidisciplinary Archaeological Research Institute
- Subjects
Adult ,Male ,Czech ,Archeology ,Stable isotope analysis ,Adolescent ,Nutritional stress ,Tertiary Syphilis ,Anthropologie physique ,Bone and Bones ,Pathology and Forensic Medicine ,[SHS]Humanities and Social Sciences ,Young Adult ,medicine ,Pathology ,Humans ,0601 history and archaeology ,Syphilis ,Pathological ,Aged ,Czech Republic ,Isotope analysis ,Carbon Isotopes ,060101 anthropology ,Bone collagen ,Nitrogen Isotopes ,060102 archaeology ,National museum ,business.industry ,Museums ,Treponemal infection ,History, 19th Century ,06 humanities and the arts ,Middle Aged ,medicine.disease ,language.human_language ,3. Good health ,Diet ,Isotopes et éléments radioactifs ,Sample size determination ,language ,Female ,Collagen ,business ,Demography - Abstract
Objective: This paper aims at investigating the possible existence of isotopic offsets in δ13Ccol and δ15Ncol valuesin relation to tertiary syphilis.Material: Based on materials from the 19th c. A.D. deriving from the pathological-anatomical reference collection(the Jedlička collection) of the National Museum in Prague (Czech Republic), a comparative approach often individuals with syphilis and nine without the disease was undertaken.Methods: Bone powder samples were defatted according to the protocol of Liden et al. (1995). Bone collagen wasextracted following the protocol of Bocherens et al. (1991).Results: Our results show that individuals with syphilis have lower δ13Ccol values than individuals without thedisease; the observed difference between the two groups is about 0.3-0.4‰, which is relatively small but stillmeaningful. However, no difference between δ15Ncol values of the two groups has been noticed.Conclusions: Either diets prescribed by physicians to syphilitic patients or nutritional stress caused by cyclicappetite disturbance due to the disease itself or the administered medical treatment appeared to be possibleexplanations of the observed isotopic pattern. Overall, the response of the two isotopic proxies could argue forrelatively limited nutritional restrictions.Significance: This is the first study examining bone collagen isotopic response to syphilis based on clinicallydocumented human skeletal materials.Limitations: The sample sizes are relatively small and cautiousness must be taken regarding the interpretations ofthe data.Suggestions for further research: Compound-specific stable isotope investigations and analysis of mercury contentcould be helpful to better understand the observed isotopic effects., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2019
38. Was He Murdered or Was He Not?-Part II: Multi-Elemental Analyses of Hair and Bone Samples from Tycho Brahe and Histopathology of His Bones
- Author
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Kaare Lund Rasmussen, Jan Kameník, Petr Velemínský, Jens Vellev, Niels Lynnerup, Lilian Skytte, Jan Kučera, Jiri Smolik, Jaroslav Brůžek, Marie Kubešová, Vladimír Havránek, V. Karpenko, and Ctibor Povýšil
- Subjects
Archeology ,History ,medicine.medical_specialty ,education.field_of_study ,060102 archaeology ,business.industry ,Time trends ,010401 analytical chemistry ,Population ,06 humanities and the arts ,Anatomy ,Histopathological examination ,01 natural sciences ,0104 chemical sciences ,medicine ,0601 history and archaeology ,Histopathology ,business ,education - Abstract
Hair and bone samples procured from the remains of Tycho Brahe were analysed by several analytical techniques. In segmented hair samples, concentrations of Fe, As, Ag and Au at the tips exceeded values for the contemporary population; however, they decreased towards the hair bulbs, similarly to Hg, indicating that recent exposure that was discontinued ~2 months prior to Brahe's death. Several other elements did not follow this pattern. Analyses of bones revealed signs of long-term exposure to Au, while many other elements were within expected ranges. Histopathological examination of bone sections yielded no signs of severe bone metabolic disorders.
- Published
- 2016
39. Disregarding population specificity: its influence on the sex assessment methods from the tibia
- Author
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Hana Brzobohatá, Jana Velemínská, Anežka Kotěrová, Jaroslav Brůžek, Ján Dupej, and Aleš Pilný
- Subjects
Adult ,Male ,Czech ,Population ,Sample (statistics) ,01 natural sciences ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,Discriminant function analysis ,Humans ,030216 legal & forensic medicine ,education ,Aged ,Aged, 80 and over ,education.field_of_study ,Tibia ,010401 analytical chemistry ,Discriminant Analysis ,Forensic anthropology ,Middle Aged ,Sex Determination by Skeleton ,Linear discriminant analysis ,language.human_language ,0104 chemical sciences ,Secular variation ,Forensic science ,Geography ,language ,Forensic Anthropology ,Female ,Neural Networks, Computer ,Anatomic Landmarks ,Demography - Abstract
Forensic anthropology has developed classification techniques for sex estimation of unknown skeletal remains, for example population-specific discriminant function analyses. These methods were designed for populations that lived mostly in the late nineteenth and twentieth centuries. Their level of reliability or misclassification is important for practical use in today's forensic practice; it is, however, unknown. We addressed the question of what the likelihood of errors would be if population specificity of discriminant functions of the tibia were disregarded. Moreover, five classification functions in a Czech sample were proposed (accuracies 82.1-87.5 %, sex bias ranged from -1.3 to -5.4 %). We measured ten variables traditionally used for sex assessment of the tibia on a sample of 30 male and 26 female models from recent Czech population. To estimate the classification accuracy and error (misclassification) rates ignoring population specificity, we selected published classification functions of tibia for the Portuguese, south European, and the North American populations. These functions were applied on the dimensions of the Czech population. Comparing the classification success of the reference and the tested Czech sample showed that females from Czech population were significantly overestimated and mostly misclassified as males. Overall accuracy of sex assessment significantly decreased (53.6-69.7 %), sex bias -29.4-100 %, which is most probably caused by secular trend and the generally high variability of body size. Results indicate that the discriminant functions, developed for skeletal series representing geographically and chronologically diverse populations, are not applicable in current forensic investigations. Finally, implications and recommendations for future research are discussed.
- Published
- 2016
40. A validation study of the Stoyanova et al. method (2017) for age-at-death estimation quantifying the 3D pubic symphyseal surface of adult males of European populations
- Author
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Jana Velemínská, Jaroslav Brůžek, Eugénia Cunha, and Anežka Kotěrová
- Subjects
Adult ,Male ,Validation study ,Multivariate statistics ,Pubic symphysis ,Sample (statistics) ,01 natural sciences ,Pathology and Forensic Medicine ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Imaging, Three-Dimensional ,Age Determination by Skeleton ,Statistics ,medicine ,Humans ,Computer Simulation ,030216 legal & forensic medicine ,Mathematics ,Aged ,Estimation ,Aged, 80 and over ,010401 analytical chemistry ,Age at death ,Univariate ,Pubic Symphysis ,Regression analysis ,Middle Aged ,0104 chemical sciences ,Europe ,medicine.anatomical_structure ,Forensic Anthropology ,Regression Analysis - Abstract
The age-at-death estimation thresholds have recently been shifted towards a more objective assessment of the aging process. Such a non-subjective approach offers quantitative methods of age estimation; for instance, the method relating to the surfaces of pubic symphyses of males published by Stoyanova et al. (J Forensic Sci 62:1434–1444, 2017). A validation study was conducted to test the method performance in European samples. The sample consisted of 96 meshes of pubic symphyses of male individuals (known sex and age) that came from four different samples (two Portuguese collections, one Swiss, and one Crete). Stoyanova’s method based on five regression models (three univariate and two multivariate models) performed worse in our sample, but only when the whole sample (without age limitation) was included. A sample limited to individuals under 40 years of age achieved better results in our study. The best results were reached through the thin plate spline algorithm (TPS/BE) with a root mean square error of 5.93 years and inaccuracy of 4.47 years. Generally, the multivariate regression models did not contribute to better age estimation. In our sample in all age categories, age was systematically underestimated. The quantitative method tested in this study works best for individuals under 40 years of age and provides a suitable basis for further research.
- Published
- 2018
41. Sex estimation using external morphology of the frontal bone and frontal sinuses in a contemporary Czech population
- Author
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Jana Velemínská, Markéta Čechová, Jaroslav Brůžek, Martin Horák, Šárka Bejdová, and Ján Dupej
- Subjects
Male ,Population ,Biology ,01 natural sciences ,Pathology and Forensic Medicine ,03 medical and health sciences ,Human skull ,0302 clinical medicine ,medicine ,Humans ,030216 legal & forensic medicine ,education ,Czech Republic ,Morphometrics ,education.field_of_study ,Sex Characteristics ,010401 analytical chemistry ,Skull ,Forensic anthropology ,Anatomy ,Sex Determination by Skeleton ,0104 chemical sciences ,Sexual dimorphism ,Frontal bone ,medicine.anatomical_structure ,Sex estimation ,Frontal Bone ,Forensic Anthropology ,Female - Abstract
Sex estimation is a task of utmost importance in forensic anthropology and bioarcheology. Along with the pelvic bone, the skull is the most important source of sexual dimorphism. On the human skull, the upper third of the face (i.e., the frontal bone) is one of the most significant sexually dimorphic structures useful in anthropological research, especially when studied by methods of virtual anthropology. This study was focused on sex estimation using the form and shape of the external surface of the frontal bone with or without the inclusion of its sinuses. The study sample consisted of 103 cranial CT images from a contemporary Czech population. Three-dimensional virtual models of the frontal bones and sinuses were analyzed using geometric morphometrics and multidimensional statistics: coherent point drift-dense correspondence analysis (CPD-DCA), principal component analysis (PCA), and support vector machine (SVM). The whole external frontal surface was significantly different between males and females both in form and shape. The greatest total success rate of sex estimation based on form was 93.2%, which decreased to 86.41% after crossvalidation, and this model identified females and males with the same accuracy. The best estimation based on shape reached a success rate of 91.26%, with slightly greater accuracy for females. After crossvalidation, however, the success rate decreased to 83.49%. The differences between sexes were significant also in the volume and surface of the frontal sinuses, but the sex estimation had only 64.07% accuracy after crossvalidation. Simultaneous use of the shape of the frontal surface and the frontal sinuses improved the total success rate to 98.05%, which decreased to 84.46% after crossvalidation.
- Published
- 2018
42. IsoArcH.eu: An open-access and collaborative isotope database for bioarchaeological samples from the Graeco-Roman world and its margins
- Author
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Ricardo J. Fernandes, Dominique Castex, Xavier de Rochefort, Kevin Salesse, Elise Dufour, Jaroslav Brůžek, History, Archeology, Arts, Philosophy and Ethics, and Multidisciplinary Archaeological Research Institute
- Subjects
010506 paleontology ,Archeology ,060102 archaeology ,Database ,06 humanities and the arts ,computer.software_genre ,01 natural sciences ,Archaeology ,Georeference ,Classical antiquity ,0601 history and archaeology ,computer ,Geology ,0105 earth and related environmental sciences - Abstract
This paper describes IsoArcH, a new web-based database of isotopic data for bioarchaeological samples from the Graeco-Roman world and its margins. IsoArcH was designed as a cooperative platform for the dissemination of isotopic data and associated archaeological information. IsoArcH follows the open access model and is freely accessible online ( http://www.isoarch.eu ). Created for paleodietary, paleomobility and paleoenvironmental reconstruction research purposes, IsoArcH compiled to this day published isotopic data for human, animal, and plant remains, as well as organic residues, from nearly 300 sites. All data have been georeferenced allowing for their display on ancient world maps and placement into their contemporaneous geopolitical background. In this paper, several data-driven examples are shown to illustrate the research potential offered by IsoArcH.
- Published
- 2018
43. Kinship and morphological similarity in the skeletal remains of individuals with known genealogical data (Bohemia, 19th to 20th centuries): A new methodological approach
- Author
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Jaroslav Brůžek, Petr Velemínský, Luboš Vostrý, Jan Cvrček, and Ján Dupej
- Subjects
0301 basic medicine ,Adult ,Male ,Morphological similarity ,Population ,Biology ,Positive correlation ,White People ,Anthropology, Physical ,03 medical and health sciences ,Young Adult ,Similarity (network science) ,Kinship ,Humans ,0601 history and archaeology ,Family ,Inbreeding ,education ,Aged ,Czech Republic ,Aged, 80 and over ,education.field_of_study ,060101 anthropology ,Anthropometry ,Significant difference ,History, 19th Century ,06 humanities and the arts ,History, 20th Century ,Middle Aged ,030104 developmental biology ,Evolutionary biology ,Anthropology ,Trait ,Female ,Anatomy ,Genealogy and Heraldry - Abstract
Objectives This article proposes a new approach, called the "similarity coefficient" (SC) for verifying family relationships from skeletal remains using nonmetric traits. Based on this method and further analyses, the authors aim to show the degree of similarity between individuals with varying degrees of kinship, including inbred individuals. Materials and methods Our sample includes the skeletal remains of 34 individuals with known genealogical data (four generations, 19th to 20th centuries). A total of 243 skeletal nonmetric traits were evaluated with respect to their anatomical characteristics. The SC was calculated by quantifying the agreement of trait occurrence between individuals. We also identified the traits that support the biological relationships of particular individuals by accounting for their population frequencies. Results There was a positive correlation between the morphological similarity of biologically related individuals and their biological distance. In some cases, we found greater degree of morphological similarity between first cousins than among other close relatives such as parents and children. At the same time, there was no statistically significant difference in the degree of similarity between inbred individuals and common relatives. Proven family relationships were best reflected by cranial traits, especially bone bridges associated with the courses of blood vessels and nerves. Conclusions The use of skeletal nonmetric traits for the detection of relatives is possible. There is a relationship between biological distance and the degree of morphological similarity in related individuals. It also appears that inbreeding, despite previous assumptions, does not lead to a significant reduction in morphological variation.
- Published
- 2018
44. Rich table but short life:Diffuse idiopathic skeletal hyperostosis in Danish astronomer Tycho Brahe (1546-1601) and its possible consequences
- Author
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Martin Horák, Ctibor Povýšil, Sylva Kaupová, Jaroslav Podliska, Zdeněk Dragoun, Jens Vellev, Sacha Kacki, Kaare Lund Rasmussen, Alizé Lacoste Jeanson, Niels Lynnerup, Jaroslav Brůžek, Jiří Smolík, Jan Kučera, Petr Velemínský, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Duke University [Durham], Antropologické oddělení, Národní muzeum, National Museum, Prague, Laboratory of Biological Anthropology, Faculty of Health and Medical Sciences, University of Copenhagen = Københavns Universitet (KU)-University of Copenhagen = Københavns Universitet (KU), University of Copenhagen = Københavns Universitet (KU), Laboratoire méditerranéen de préhistoire Europe-Afrique (LAMPEA), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Ministère de la Culture (MC), Charles University [Prague] (CU), Department of Radiology, Na Homolce Hospital, Nuclear Physics Institute of Czech Academy of Sciences, University of Southern Denmark (SDU), Department of Archaeology, National Heritage Institute, Czech Academy of Sciences [Prague] (CAS), Aarhus University [Aarhus], Durham University, University of Copenhagen = Københavns Universitet (UCPH)-University of Copenhagen = Københavns Universitet (UCPH), and University of Copenhagen = Københavns Universitet (UCPH)
- Subjects
Pediatrics ,Decision Analysis ,Physiology ,Astronomy ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,lcsh:Medicine ,Ossification ,[SHS]Humanities and Social Sciences ,0302 clinical medicine ,Endocrinology ,Cause of Death ,Medicine and Health Sciences ,Medicine ,030212 general & internal medicine ,lcsh:Science ,Paleopathology ,Musculoskeletal System ,Cause of death ,Diffuse Idiopathic Skeletal Hyperostosis ,Multidisciplinary ,Astronomer ,Hyperostosis, Diffuse Idiopathic Skeletal ,Short life ,3. Good health ,Physiological Parameters ,Connective Tissue ,language ,Engineering and Technology ,Bone Remodeling ,medicine.symptom ,Anatomy ,Management Engineering ,Research Article ,Hyperostosis ,medicine.medical_specialty ,Endocrine Disorders ,Research and Analysis Methods ,Bone and Bones ,Danish ,03 medical and health sciences ,Hyperostosis, Diffuse Idiopathic Skeletal/diagnosis ,Diabetes Mellitus ,Humans ,Obesity ,Skeleton ,Nutrition ,030203 arthritis & rheumatology ,Coma ,Ligaments ,business.industry ,lcsh:R ,Body Weight ,Decision Trees ,Biology and Life Sciences ,Bone and Bones/diagnostic imaging ,medicine.disease ,language.human_language ,Spine ,Diet ,Biological Tissue ,Metabolic Disorders ,lcsh:Q ,business ,Physiological Processes ,Hair ,Hair/pathology - Abstract
International audience; The exhumation of Danish astronomer Tycho Brahe (1546-1601) was performed in 2010 to verify speculative views on the cause of his death. Previous analyses of skeletal and hair remains recovered from his grave refuted the presumption that he died from poisoning. These studies also outlined the possibility that he actually died from an acute illness, echoing the rather vague and inaccurate testimony of some historical records. We performed a detailed paleopathological analysis of Tycho Brahe's skeletal remains, along with a reconstruction of his diet based on carbon and nitrogen stable isotopes analysis and an estimate of his physical status (relative body fat) based on medullar and cortical dimensions of the femo-ral shaft. The astronomer's remains exhibit bone changes indicative of diffuse idiopathic skeletal hyperostosis (DISH). The study further allows us to classify him as obese (100% reliability according to our decision tree designed from Danish males), and points out his rich diet (high input of animal protein and/or marine resources) and high social status. Comorbidi-ties of DISH and obesity are reviewed, and their influence on health status is discussed. We further consider some conditions associated with metabolic syndrome as possible causes of Tycho Brahe's final symptoms (urinary retention, renal failure and coma), including diabetes, alcoholic ketoacidosis and benign prostatic hypertrophy. Although a definite and specific diagnosis cannot be established, our study points to today's civilization diseases often associated with DISH and metabolic syndrome as the possible cause of death of Tycho Brahe.
- Published
- 2018
45. Development of facial sexual dimorphism in children aged between 12 and 15 years: a three-dimensional longitudinal study
- Author
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Jana Koudelová, V. Cagáňová, Václav Krajíček, Jaroslav Brůžek, and Jana Velemínská
- Subjects
Male ,Chin ,Longitudinal study ,Adolescent ,Eyebrow ,Orthodontics ,Nose ,Biology ,Eye ,Imaging, Three-Dimensional ,medicine ,Humans ,Forehead ,Longitudinal Studies ,Child ,Mouth ,Principal Component Analysis ,Sex Characteristics ,Optical Imaging ,Puberty ,Longitudinal growth ,Age Factors ,Anatomic Variation ,Anatomy ,Cheek ,Lip ,Sexual dimorphism ,medicine.anatomical_structure ,Otorhinolaryngology ,Face ,Photogrammetry ,Female ,Surgery ,Allometry ,Eyebrows ,Oral Surgery ,Prominent nose - Abstract
Structured Abstract Objectives To evaluate sexual dimorphism of facial form and shape and to describe differences between the average female and male face from 12 to 15 years. Setting and Sample Population Overall 120 facial scans from healthy Caucasian children (17 boys, 13 girls) were longitudinally evaluated over a 4-year period between the ages of 12 and 15 years. Materials and Methods Facial surface scans were obtained using a three-dimensional optical scanner Vectra-3D. Variation in facial shape and form was evaluated using geometric morphometric and statistical methods (DCA, PCA and permutation test). Average faces were superimposed, and the changes were evaluated using colour-coded maps. Results There were no significant sex differences (p > 0.05) in shape in any age category and no differences in form in the 12- and 13-year-olds, as the female faces were within the area of male variability. From the age of 14, a slight separation occurred, which was statistically confirmed. The differences were mainly associated with size. Generally boys had more prominent eyebrow ridges, more deeply set eyes, a flatter cheek area, and a more prominent nose and chin area. Conclusion The development of facial sexual dimorphism during pubertal growth is connected with ontogenetic allometry.
- Published
- 2015
46. Reconstruction of the Gravettian food-web at Předmostí I using multi-isotopic tracking (13C, 15N, 34S) of bone collagen
- Author
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Mietje Germonpré, Christoph Wissing, Martin Oliva, Yuichi I. Naito, Hervé Bocherens, Jaroslav Brůžek, Dorothée G. Drucker, and Martina Lázničková-Galetová
- Subjects
010506 paleontology ,060102 archaeology ,biology ,Woolly mammoth ,Pleistocene ,Ecology ,Fauna ,06 humanities and the arts ,15. Life on land ,biology.organism_classification ,01 natural sciences ,Predation ,Woolly rhinoceros ,0601 history and archaeology ,Mammal ,0105 earth and related environmental sciences ,Earth-Surface Processes ,Trophic level ,Mammoth - Abstract
The Gravettian site of Předmosti I in the central Moravian Plain has yielded a rich and diverse large mammal fauna dated around 25–27,000 14 C years BP (ca. 29,500–31,500 cal BP). This fauna includes numerous carnivores (cave lion, wolf, brown bear, polar fox, wolverine) and herbivores (reindeer, large bovine, red deer, muskox, horse, woolly rhinoceros, woolly mammoth) whose trophic position could be reconstructed using stable isotopic tracking (δ 13 C, δ 15 N, δ 34 S) of bone collagen ( n = 63). Among large canids, two morphotypes, “Pleistocene wolves” and “Palaeolithic dogs”, were considered, and two human bones attributed to the Gravettian assemblage of Předmosti I were also sampled. The trophic system around the Gravettian settlement of Předmosti I showed the typical niche partitioning among herbivores and carnivores seen in other mammoth-steppe contexts. The contribution of the analyzed prey species to the diet of the predators, including humans, was evaluated using a Bayesian mixing model (SIAR). Lions included great amounts of reindeer/muskox and possibly bison in their diet, while Pleistocene wolves were more focused on horse and possibly mammoth. Strong reliance on mammoth meat was found for the human of the site, similarly to previously analyzed individuals from other Gravettian sites in Moravia. Interestingly, the large canids interpreted as “Palaeolithic dogs” had a high proportion of reindeer/muskox in their diet, while consumption of mammoth would be expected from the availability of this prey especially in case of close interaction with humans. The peculiar isotopic composition of the Palaeolithic dogs of Předmosti I may indicate some control of their dietary intake by Gravettian people, who could have use them more for transportation than hunting purpose.
- Published
- 2015
47. Body mass estimation from the skeleton: An evaluation of 11 methods
- Author
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Niels Lynnerup, Ján Dupej, Chiara Villa, Jaroslav Brůžek, Alizé Lacoste Jeanson, and Frédéric Santos
- Subjects
Adult ,Male ,Population ,Absolute difference ,Overweight ,Pathology and Forensic Medicine ,Body Mass Index ,Ilium ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Statistics ,medicine ,Humans ,0601 history and archaeology ,030216 legal & forensic medicine ,Femur ,education ,Mathematics ,Aged ,Estimation ,Aged, 80 and over ,education.field_of_study ,060101 anthropology ,Forensic anthropology ,Reproducibility of Results ,06 humanities and the arts ,Middle Aged ,Skeleton (computer programming) ,Body Height ,Forensic Anthropology ,Female ,Underweight ,medicine.symptom ,Tomography, X-Ray Computed ,Law ,Body mass index - Abstract
Estimating an individual body mass (BM) from the skeleton is a challenge for forensic anthropology. However, identifying someone's BMI (Body Mass Index) category, i.e. underweight, normal, overweight or obese, could contribute to identification. Individual BM is also known to influence the age-at-death estimation from the skeleton. Several methods are regularly used by both archaeologists and forensic practitioners to estimate individual BM. The most commonly used methods are based on femoral head breadth, or stature and bi-iliac breadth. However, those methods have been created from mean population BMs and are therefore meant to estimate the average BM of a population. Being that they are based on individual BM data and estimated femoral cortical areas, the newest published methods are supposed to be more accurate. We evaluated the accuracy and reliability of the most commonly used and most recent BM estimation methods (n=11) on a sample of 64 individuals. Both sexes and all BMI categories are represented, as well as a wide range of BM. Ages in this sample range from 20 to 87 years of age. Absolute and real differences between actual BM and estimated BM were assessed; they determined the accuracy for individual BM estimation and for average BM estimation of a population, respectively. The proportion of the sample whose estimated BM falls within ±10% and ±20% of their actual BM determines the reliability of the methods in our sample for, respectively, individual BM estimation and average BM of a population. The tested methods result in an absolute difference of 11kg-26kg±10kg with regards to prediction of individuals actual BM. The real differences are very variable from method to method, ranging from -14kg to 25kg. None of the tested methods is able to estimate BM of half of the sample within ±10% of their actual BM but most of them can estimate BM of more than half of the sample within ±20% of their actual BM. The errors increase with increasing BM, demonstrating a bias in all the methods. No bone variable tested correlated with BM. BMI categories were correctly predicted for less than 50% of the sample in most cases. In conclusion, our study demonstrates that the 11 methods tested are not suited for estimating individual BM or for predicting BMI categories. However, they are accurate and reliable enough for estimating the average BM of a population.
- Published
- 2017
48. Semiautomatic extraction of cortical thickness and diaphyseal curvature from CT scans
- Author
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Josef Pelikán, Ján Dupej, Jaroslav Brůžek, and Alizé Lacoste Jeanson
- Subjects
0301 basic medicine ,Male ,Computer science ,Robust statistics ,Curvature ,Anthropology, Physical ,03 medical and health sciences ,Robustness (computer science) ,Medial axis ,Distortion ,medicine ,Image Processing, Computer-Assisted ,Humans ,0601 history and archaeology ,Computer vision ,Femur ,060101 anthropology ,business.industry ,06 humanities and the arts ,Thresholding ,Diaphysis ,030104 developmental biology ,medicine.anatomical_structure ,Anthropology ,Cortical bone ,Female ,Artificial intelligence ,Anatomy ,business ,Tomography, X-Ray Computed ,Algorithms - Abstract
The understanding of locomotor patterns, activity schemes, and biological variations has been enhanced by the study of the geometrical properties and cortical bone thickness of the long bones measured using CT scan cross-sections. With the development of scanning procedures, the internal architecture of the long bones can be explored along the entire diaphysis. Recently, several methods that map cortical thickness along the whole femoral diaphysis have been developed. Precise homology is vital for statistical examination of the data; however, the repeatability of these methods is unknown and some do not account for the curvature of the bones. We have designed a semiautomatic workflow that improves the morphometric analysis of cortical thickness, including robust data acquisition with minimal user interaction and considering the bone curvature. The proposed algorithm also performs automatic landmark refinement and rigid registration on the extracted morphometric maps of the cortical thickness. Because our algorithm automatically reslices the diaphysis into 100 cross-sections along the medial axis and uses an adaptive thresholding method, it is usable on CT scans that contain soft tissues as well as on bones that have not been oriented specifically prior to scanning. Our approach exhibits considerable robustness to error in user-supplied landmarks, suppresses distortion caused by the curvature of the bones, and calculates the curvature of the medial axis.
- Published
- 2017
49. Urban and rural infant-feeding practices and health in early medieval Central Europe (9th-10th Century, Czech Republic)
- Author
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Petr Velemínský, Estelle Herrscher, Lumír Poláček, Sandrine Cabut, Sylva Kaupová, and Jaroslav Brůžek
- Subjects
2. Zero hunger ,Czech ,education.field_of_study ,060101 anthropology ,060102 archaeology ,Population ,Breastfeeding ,Context (language use) ,Sample (statistics) ,06 humanities and the arts ,Breast milk ,language.human_language ,Geography ,Anthropology ,language ,Weaning ,0601 history and archaeology ,Anatomy ,education ,Infant feeding ,Demography - Abstract
In the Central European context, the 9th and 10th centuries are well known for rapid cultural and societal changes concerning the development of the economic and political structures of states as well as the adoption of Christianity. A bioarchaeological study based on a subadult skeletal series was conducted to tackle the impact of these changes on infant and young child feeding practices and, consequently, their health in both urban and rural populations. Data on growth and frequency of nonspecific stress indicators of a subadult group aged 0–6 years were analyzed. A subsample of 41 individuals was selected for nitrogen and carbon isotope analyses, applying an intra-individual sampling strategy (bone vs. tooth). The isotopic results attest to a mosaic of food behaviors. In the urban sample, some children may have been weaned during their second year of life, while some others may have still been consuming breast milk substantially up to 4–5 years of age. By contrast, data from the rural sample show more homogeneity, with a gradual cessation of breastfeeding starting after the age of 2 years. Several factors are suggested which may have been responsible for applied weaning strategies. There is no evidence that observed weaning strategies affected the level of biological stress which the urban subadult population had to face compared with the rural subadult population.
- Published
- 2014
50. Early medieval diet in childhood and adulthood and its reflection in the dental health of a Central European population (Mikulčice, 9th–10th centuries, Czech Republic)
- Author
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Alena Černíková, Petr Velemínský, Michaela Jílková, Sylva Kaupová, Lumír Poláček, and Jaroslav Brůžek
- Subjects
0301 basic medicine ,Czech ,Dental Wear ,Population ,03 medical and health sciences ,0302 clinical medicine ,stomatognathic system ,medicine ,Juvenile ,education ,General Dentistry ,education.field_of_study ,Dietary composition ,business.industry ,Dental health ,030206 dentistry ,Cell Biology ,General Medicine ,European population ,Enamel hypoplasia ,medicine.disease ,language.human_language ,stomatognathic diseases ,030104 developmental biology ,Otorhinolaryngology ,language ,business ,Demography - Abstract
Objectives The aim of this study is to provide a detailed view of dental health in relationship to the diet of the Great Moravian population, with emphasis on childhood diet. Design We studied skeletal samples of the early medieval population of the Mikulcice agglomeration (Czech Republic) originating from the cemetery of the church VI (91 adults). Stable isotope analysis of carbon and nitrogen (intra-individual sampling - tooth and bone) was performed on this material, and dental characteristics (carious lesions, intensity of caries (I-CE), dental wear, linear enamel hypoplasia) evaluated. Results Isotopic signals obtained from tooth and bone samples of the same individuals differ significantly. Tooth samples show higher δ13C and lower δ15N than bone samples. δ15N in tooth and bone samples is related to socio-economic status. We discovered a relationship between isotopic signals from tooth or bone and intensity of caries and dental wear. Conclusion We provide the first direct information about the diet of the juvenile part of the Great Moravian population from Mikulcice. The diet of children differed from the diet of adults. Children consumed more millet and less animal protein than adults. The social stratification of this population was obvious in dietary composition from childhood. Elites consumed more animal proteins than non-elite individuals. Tooth decay was related to relative consumption of plant and animal proteins. Greater dental wear is related to a diet based on C3 plants. There was no significant connection between diet composition and the formation of enamel hypoplasia.
- Published
- 2019
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