93 results on '"Limin HAO"'
Search Results
2. Genome screening, reporting, and genetic counseling for healthy populations
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Selina Casalino, Erika Frangione, Monica Chung, Georgia MacDonald, Sunakshi Chowdhary, Chloe Mighton, Hanna Faghfoury, Yvonne Bombard, Lisa Strug, Trevor J. Pugh, Jared Simpson, Saranya Arnoldo, Navneet Aujla, Erin Bearss, Alexandra Binnie, Bjug Borgundvaag, Howard Chertkow, Marc Clausen, Marc Dagher, Luke Devine, David Di Iorio, Steven Marc Friedman, Chun Yiu Jordan Fung, Anne-Claude Gingras, Lee W. Goneau, Deepanjali Kaushik, Zeeshan Khan, Elisa Lapadula, Tiffany Lu, Tony Mazzulli, Allison McGeer, Shelley L. McLeod, Gregory Morgan, David Richardson, Harpreet Singh, Seth Stern, Ahmed Taher, Iris Wong, Natasha Zarei, Elena Greenfeld, Limin Hao, Matthew Lebo, William Lane, Abdul Noor, Jennifer Taher, and Jordan Lerner-Ellis
- Subjects
Genetics ,Genetics (clinical) - Abstract
Rapid advancements of genome sequencing (GS) technologies have enhanced our understanding of the relationship between genes and human disease. To incorporate genomic information into the practice of medicine, new processes for the analysis, reporting, and communication of GS data are needed. Blood samples were collected from adults with a PCR-confirmed SARS-CoV-2 (COVID-19) diagnosis (target N = 1500). GS was performed. Data were filtered and analyzed using custom pipelines and gene panels. We developed unique patient-facing materials, including an online intake survey, group counseling presentation, and consultation letters in addition to a comprehensive GS report. The final report includes results generated from GS data: (1) monogenic disease risks; (2) carrier status; (3) pharmacogenomic variants; (4) polygenic risk scores for common conditions; (5) HLA genotype; (6) genetic ancestry; (7) blood group; and, (8) COVID-19 viral lineage. Participants complete pre-test genetic counseling and confirm preferences for secondary findings before receiving results. Counseling and referrals are initiated for clinically significant findings. We developed a genetic counseling, reporting, and return of results framework that integrates GS information across multiple areas of human health, presenting possibilities for the clinical application of comprehensive GS data in healthy individuals.
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- 2022
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3. Positive effect of ethanol-induced Lactococcus lactis on alcohol metabolism in mice
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Sisi Chen, Shimin Jia, Keke Suo, Qiaozhen Kang, Limin Hao, Laizheng Lu, Xin Liu, Jinyong Huang, and Jike Lu
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Food Science - Published
- 2022
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4. Development of a clinical polygenic risk score assay and reporting workflow
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Limin Hao, Peter Kraft, Gabriel F. Berriz, Elizabeth D. Hynes, Christopher Koch, Prathik Korategere V Kumar, Shruti S. Parpattedar, Marcie Steeves, Wanfeng Yu, Ashley A. Antwi, Charles A. Brunette, Morgan Danowski, Manish K. Gala, Robert C. Green, Natalie E. Jones, Anna C. F. Lewis, Steven A. Lubitz, Pradeep Natarajan, Jason L. Vassy, and Matthew S. Lebo
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General Medicine ,General Biochemistry, Genetics and Molecular Biology - Abstract
Implementation of polygenic risk scores (PRS) may improve disease prevention and management but poses several challenges: the construction of clinically valid assays, interpretation for individual patients, and the development of clinical workflows and resources to support their use in patient care. For the ongoing Veterans Affairs Genomic Medicine at Veterans Affairs (GenoVA) Study we developed a clinical genotype array-based assay for six published PRS. We used data from 36,423 Mass General Brigham Biobank participants and adjustment for population structure to replicate known PRS–disease associations and published PRS thresholds for a disease odds ratio (OR) of 2 (ranging from 1.75 (95% CI: 1.57–1.95) for type 2 diabetes to 2.38 (95% CI: 2.07–2.73) for breast cancer). After confirming the high performance and robustness of the pipeline for use as a clinical assay for individual patients, we analyzed the first 227 prospective samples from the GenoVA Study and found that the frequency of PRS corresponding to published OR > 2 ranged from 13/227 (5.7%) for colorectal cancer to 23/150 (15.3%) for prostate cancer. In addition to the PRS laboratory report, we developed physician- and patient-oriented informational materials to support decision-making about PRS results. Our work illustrates the generalizable development of a clinical PRS assay for multiple conditions and the technical, reporting and clinical workflow challenges for implementing PRS information in the clinic.
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- 2022
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5. Nanoparticles Prepared by Polysaccharides Extracted from Biyang Floral Mushroom Loaded with Resveratrol: Characterization, Bioactivity and Release Behavior Under in Vitro Digestion
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Keke Liu, Jike Lu, Xin Liu, Yongqi Liu, Limin Hao, and Juanjuan Yi
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- 2023
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6. Protective effect of coix seed seedling extract on 60 Co‐γ radiation‐induced oxidative stress in mice
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Xue Li, Juanjuan Yi, Jiaqing Zhu, Changcheng Zhao, Yan Cui, Yanling Shi, Limin Hao, and Jike Lu
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Food Science - Published
- 2021
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7. Cognition of polysaccharides from confusion to clarity: when the next 'omic' will come?
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Xin Liu, Limin Hao, Qiaozhen Kang, Jike Lu, Yinxin Cui, and Juanjuan Yi
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chemistry.chemical_classification ,General Medicine ,Computational biology ,Biology ,Polysaccharide ,Industrial and Manufacturing Engineering ,Modern life ,Structure and function ,law.invention ,chemistry ,law ,medicine ,CLARITY ,Identification (biology) ,Review process ,Health food ,medicine.symptom ,Food Science ,Confusion - Abstract
With the accelerated pace of modern life, people are facing more and more health pressure. The study of polysaccharides seemed a good choice as a potential treasure trove. Polysaccharides, one of the four basic substances (proteins, nucleic acids, lipids and carbohydrates) that constitute life activities, are obviously an underrated macromolecular substance with great potential. Compared with protein and nucleic acid, the research of polysaccharides is still in the primary stage. The relationship between structure and function of polysaccharides is not clear. In this review, we highlighted the main methods of extraction, purification and structure identification of polysaccharides; summarized their biological activities including immunoregulation, hypoglycemic, anti-tumor, anti-virus, anti-coagulation, and so on. Particularly, the relationship between their structures and activities was described. In addition, the applications of polysaccharides in health food, medicine and cosmetics were also reviewed. This review can help polysaccharide researchers quickly understand the whole process of polysaccharides research, and also provide a reference for the comprehensive utilization of polysaccharides. We need to standardize the research of polysaccharides to make the experimental data more universal, and take it as important references in the review process. Glycomic may appear as the next "omic" after genomic and proteomic in the future. This review provides support for the advancement of glycomics.
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- 2021
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8. Simultaneous reliability and reliability-sensitivity analyses based on the information-reuse of sparse grid numerical integration
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Jun Xu, Limin Hao, Jian-feng Mao, and Zhi-wu Yu
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Control and Optimization ,Control and Systems Engineering ,Computer Graphics and Computer-Aided Design ,Software ,Computer Science Applications - Published
- 2022
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9. Genome Reporting for Healthy Populations-Pipeline for Genomic Screening from the GENCOV COVID-19 Study
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Erika, Frangione, Monica, Chung, Selina, Casalino, Georgia, MacDonald, Sunakshi, Chowdhary, Chloe, Mighton, Hanna, Faghfoury, Yvonne, Bombard, Lisa, Strug, Trevor, Pugh, Jared, Simpson, Limin, Hao, Matthew, Lebo, William J, Lane, Jennifer, Taher, and Jordan, Lerner-Ellis
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Male ,SARS-CoV-2 ,Blood Group Antigens ,COVID-19 ,Computational Biology ,Humans ,Genomics - Abstract
Genome sequencing holds the promise for great public health benefits. It is currently being used in the context of rare disease diagnosis and novel gene identification, but also has the potential to identify genetic disease risk factors in healthy individuals. Genome sequencing technologies are currently being used to identify genetic factors that may influence variability in symptom severity and immune response among patients infected by SARS-CoV-2. The GENCOV study aims to look at the relationship between genetic, serological, and biochemical factors and variability of SARS-CoV-2 symptom severity, and to evaluate the utility of returning genome screening results to study participants. Study participants select which results they wish to receive with a decision aid. Medically actionable information for diagnosis, disease risk estimation, disease prevention, and patient management are provided in a comprehensive genome report. Using a combination of bioinformatics software and custom tools, this article describes a pipeline for the analysis and reporting of genetic results to individuals with COVID-19, including HLA genotyping, large-scale continental ancestry estimation, and pharmacogenomic analysis to determine metabolizer status and drug response. In addition, this pipeline includes reporting of medically actionable conditions from comprehensive gene panels for Cardiology, Neurology, Metabolism, Hereditary Cancer, and Hereditary Kidney, and carrier screening for reproductive planning. Incorporated into the genome report are polygenic risk scores for six diseases-coronary artery disease; atrial fibrillation; type-2 diabetes; and breast, prostate, and colon cancer-as well as blood group genotyping analysis for ABO and Rh blood types and genotyping for other antigens of clinical relevance. The genome report summarizes the findings of these analyses in a way that extensively communicates clinically relevant results to patients and their physicians. © 2022 Wiley Periodicals LLC. Basic Protocol 1: HLA genotyping and disease association Basic Protocol 2: Large-scale continental ancestry estimation Basic Protocol 3: Dosage recommendations for pharmacogenomic gene variants associated with drug response Support Protocol: System setup.
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- 2022
10. Performance simulation and optimization of new radiant floor heating based on micro heat pipe array
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Zhenhua Quan, Heran Jing, Ruixue Dong, Yaohua Zhao, Yunhan Liu, and Limin Hao
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geography ,geography.geographical_feature_category ,Materials science ,Thermal comfort ,Building and Construction ,Numerical models ,Inlet ,Volumetric flow rate ,Heat pipe ,Heat transfer ,Heat transfer process ,Composite material ,Energy (miscellaneous) ,Leakage (electronics) - Abstract
This paper proposes two new radiant floor heating structures based on micro heat pipe array (MHPA), namely cement-tile floor and keel-wood floor. The numerical models for these different floor structures are established and verified by experiments. The temperature distribution and heat transfer process of each part are comprehensively obtained, and the structure is optimized. The results show that the cement-tile floor has the better heat transfer performance of the two. When under the same inlet water temperature and flow rate, the keel-wood floor’s surface temperature distribution is about 2 °C lower than that of the cement-tile floor. The inlet water temperature of cement-tile floor is about 10 °C lower than that of keel-wood structure when the floor surface temperature is the same. During a longitudinal heat transfer above MHPA, the floor surface temperature decreases by 0.5 °C for every 10 mm filling layer increase. In order to reduce the non-uniformity of the floor’s surface temperature and improve the thermal comfort of the heated room, the optimal structure for a floor is given, with the maximum surface temperature difference reduced by 3.35 °C. We used research focusing on new radiant floor heating, with advantages including high efficiency heat transfer, low water supply temperature, simple waterway structure, low resistance and leakage risk, to provide theory and data to support the application of an effective radiant floor heating based on MHPA.
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- 2021
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11. Radioprotective effect of radiation-induced Lactococcus lactis cell-free extract against 60Coγ injury in mice
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Keke Suo, Juanjuan Yi, Jiaqing Zhu, Limin Hao, Qiaozhen Kang, Jike Lu, Laizheng Lu, Xin Liu, Xue Li, and Sisi Chen
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chemistry.chemical_classification ,Reactive oxygen species ,biology ,Radioprotective Agent ,Chemistry ,Glutathione peroxidase ,Lactococcus lactis ,Glutathione ,Pharmacology ,biology.organism_classification ,medicine.disease_cause ,Malondialdehyde ,Superoxide dismutase ,chemistry.chemical_compound ,Genetics ,medicine ,biology.protein ,Animal Science and Zoology ,Oxidative stress ,Food Science - Abstract
Ionizing radiation (IR) is widely used in the diagnosis and treatment of various cancers. However, IR can cause damage to human health by producing reactive oxygen species. Lactococcus lactis is a type of microorganism that is beneficial to human health and has a strong antioxidant capacity. In this study, the protective effect of normal and IR-induced L. lactis IL1403 cell-free extracts (CFE and IR-CFE, respectively) against oxidative damage in vitro and the radioprotective effect of IR-CFE in vivo was evaluated using 60Coγ-induced oxidative damage model in mice. Results showed that IR-CFE exhibited a stronger oxidative damage-protective effect than CFE for L. lactis IL1403 under H2O2 in vitro. Moreover, IR-CFE also showed strong radioprotective effect on hepatocyte cells (AML-12) under radiation condition, and the effect was better than that of CFE. Animal experiment indicated that IR-CFE could reduce the IR-induced damage to the hematopoietic system by increasing the number of white blood cells and red blood cells in peripheral blood of irradiated mice. It was also observed that IR-CFE could markedly alleviate the 60Coγ-induced oxidative stress via increasing the activities of superoxide dismutase and glutathione peroxidase, enhancing the levels of glutathione, and decreasing the contents of malondialdehyde in serum, liver, and spleen. In addition, IR-CFE also could reduce the activities of alanine transaminase and aspartate aminotransferase in serum, thereby reducing radiation damage to the liver. These results suggested that IR-CFE could be considered as potential candidates for natural radioprotective agents. This study provides a theoretical basis for improving the application of lactic acid bacteria.
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- 2021
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12. Extraction, characterization, and biological activities of a polysaccharide from Poria cocos peels
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Chaoqiang Zheng, Yiwen Shao, Limin Hao, Yanling Shi, Jiaqing Zhu, Changcheng Zhao, Qingwu Jiang, Juanjuan Yi, and Jike Lu
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General Chemical Engineering ,General Chemistry ,Food Science - Published
- 2022
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13. Modification of wheat bran insoluble and soluble dietary fibers with snail enzyme
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Keke Suo, Juanjuan Yi, Jiaqing Zhu, Xue Li, Jike Lu, Xin Liu, Limin Hao, Qiaozhen Kang, Pei Wang, and Jinyong Huang
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Antioxidant ,030309 nutrition & dietetics ,DPPH ,Physicochemical properties ,medicine.medical_treatment ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Adsorption ,medicine ,Hemicellulose ,TX341-641 ,Food science ,Cellulose ,Snail enzyme ,chemistry.chemical_classification ,Functional properties ,0303 health sciences ,Bran ,Soluble dietary fiber ,Cholesterol ,Nutrition. Foods and food supply ,nutritional and metabolic diseases ,04 agricultural and veterinary sciences ,040401 food science ,Insoluble dietary fiber ,Enzyme ,chemistry ,Food Science - Abstract
Insoluble dietary fiber (IDF) and soluble dietary fiber (SDF) extracted from wheat bran were modified by snail enzyme and their physicochemical properties (water retention capacity and oil retention capacity), functional properties (cholesterol adsorption capacity, glucose adsorption capacity and antioxidant activity) and structural characterizations were evaluated. The results showed that snail enzyme modification led to the significant increase in oil retention capacity of IDF, glucose adsorption capacity and cholesterol adsorption capacity of IDF and SDF. Enzymatic modification also markedly improved the DPPH radical scavenging capacity and reducing power of IDF and SDF. Meanwhile, scanning electron microscopy (SEM) analysis indicated the microstructures of IDF and SDF powders were significantly changed. Fourier transfer-infrared spectrometry (FT-IR) showed that snail enzyme modification could degrade the part of cellulose and hemicellulose of IDF and SDF. All these improved physicochemical and functional properties of IDF and SDF might depend on their structural changes. It suggested that snail enzyme modification could effectively improve physicochemical and functional properties of IDF and SDF from wheat bran.
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- 2021
14. Genome Screening, Reporting and Counseling for Healthy Populations
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Selina Casalino, Erika Frangione, Monica Chung, Georgia MacDonald, Sunakshi Chowdhary, Chloe Mighton, Hanna Faghfoury, Yvonne Bombard, Lisa Strug, Trevor Pugh, Jared Simpson, Elena Greenfeld, Limin Hao, Matthew Lebo, William Lane, Abdul Noor, Jennifer Taher, Jordan Lerner-Ellis, and Study Workgroup GENCOV
- Abstract
Introduction: Rapid advancements of genome sequencing (GS) technologies have enhanced our understanding of the relationship between genes and human disease. In order to incorporate genomic information into the practice of medicine, new processes for the analysis, reporting and communication of GS data are needed. Methods: blood samples were collected from adults with a PCR-confirmed SARS-CoV-2 (COVID-19) diagnosis (target N=1500). GS was performed. Data was filtered and analyzed using custom pipelines and gene panels. We developed unique patient-facing materials, including an online intake survey, group counseling presentation, and consultation letters in addition to a comprehensive GS report. Results: The final report includes results generated from GS data: 1) Monogenic disease risks; 2) Carrier status; 3) Pharmacogenomic variants; 4) Polygenic risk scores for common conditions; 5) HLA genotype; 6) Genetic ancestry; 7) Blood group; and, 8) COVID-19 viral lineage. Participants complete pre-test genetic counseling and confirm preferences for secondary findings before receiving results. Counseling and referrals are initiated for clinically significant findings. Conclusion: We developed a genetic counseling, reporting, and return of results framework that integrates GS information across multiple areas of human health, presenting possibilities for the clinical application of comprehensive GS data in healthy individuals.
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- 2022
- Full Text
- View/download PDF
15. An innovative method to enhance protease tolerance of nisin in endogenous proteases
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Qiaozhen Kang, Jike Lu, Jingjing Li, Dan Pan, Laizheng Lu, Juanjuan Yi, Xin Liu, and Limin Hao
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Staphylococcus aureus ,Proteases ,Preservative ,medicine.medical_treatment ,03 medical and health sciences ,chemistry.chemical_compound ,Endopeptidases ,polycyclic compounds ,Genetics ,medicine ,Animals ,Protease Inhibitors ,Food science ,Nisin ,030304 developmental biology ,0303 health sciences ,Protease ,biology ,Lactococcus lactis ,0402 animal and dairy science ,food and beverages ,04 agricultural and veterinary sciences ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,040201 dairy & animal science ,Anti-Bacterial Agents ,Cucurbitaceae ,Milk ,Whey Proteins ,chemistry ,Food Microbiology ,Soybean Proteins ,bacteria ,lipids (amino acids, peptides, and proteins) ,Animal Science and Zoology ,Micrococcus luteus ,Antibacterial activity ,Peptide Hydrolases ,Food Science ,Egg white - Abstract
Nisin, a natural peptide produced by Lactococcus lactis cultivation in milk whey, is widely used as a preservative in industrial production. However, nisin can be degraded by endogenous enzymes in foods. In this study, we investigated the antibacterial activity of nisin-soybean protein and nisin-egg white protein and compared them with that of free nisin in cantaloupe juice, which was used as a model of endogenous protease environment. Results showed that endogenous proteases in the model resulted in a loss of nisin activity, but combining nisin with protein (soybean or egg white) resulted in greater protection of its antimicrobial activity by inhibiting endogenous proteases. The microbial addition experiment (Staphylococcus aureus and Micrococcus luteus) and preservation experiment in the food model showed that the antibacterial activity of nisin combined with either of the 2 proteins was higher than that of nisin alone in an endogenous protease environment. In summary, soybean protein and egg white protein improved the protease tolerance of nisin, expanding the application scope of nisin in food.
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- 2020
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16. Protective effect of the stressed supernatant from Lactococcus lactis subsp. lactis and its metabolic analysis
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Yihui Gao, Jiaqing Zhu, Liang Zhao, Lianming Cui, Changcheng Zhao, Juanjuan Yi, Xin Liu, Qiaozhen Kang, Limin Hao, Laizheng Lu, and Jike Lu
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Lactococcus lactis ,Genetics ,General Medicine ,Molecular Biology ,Biochemistry ,Microbiology ,Adaptation, Physiological - Abstract
There are numerous factors restricting wide application of lactic acid bacteria (LAB) in dairy industry, causing urgent demands for novel bioprotectants. Protective effects and metabolites of Lactococcus lactis subsp. lactis (L. lactis) from ultraviolet (UV)-induced supernatant were investigated and the protective mechanism was explored. The strain viability of the group treated with the supernatant of continuous UV irradiation (V1) and the group with intermittent UV irradiation (V2) was 8.45 and 14.13 times of the control group, respectively. Further exploration on the protective of L. lactis supernatant, under different dose of UV treatment, showed it was dose-dependent. The condition for the supernatant with best protective effect was vertical distance 50.00 cm, horizontal distance 25.00 cm, intermittent UV irradiation (30 s interval 30 s) for 4.5 min (V2), which was chose for untargeted metabolite analysis. And that in V1 was for comparative study. There were 181 up-regulated metabolites in V1 and 161 up-regulated metabolites in V2, respectively. Most of the up-regulated metabolites were related to secondary metabolite synthesis, environmental microbial metabolism, antibiotic synthesis and amino acid biosynthesis. Notably, production of dithiothreitol (DTT) in V2 was 65.2-fold higher than that in the control group. Trehalose in ABC transporter pathway was also up-regulated in the metabolites induced by UV. Results indicated that L. lactis could adapt to the UV stress by adjusting metabolic pathways and producing special metabolites to protect itself. This research offers the basis for robust strain development and contributes to initial study on potential bioprotectant.
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- 2022
17. Co-assembling nanoparticles of Asiatic acid and Caffeic acid phenethyl ester: Characterization, stability and bioactivity in vitro
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Yongqi, Liu, Keke, Liu, Xiaolong, Wang, Yiwen, Shao, Xue, Li, Limin, Hao, Xuemei, Zhang, Juanjuan, Yi, and Jike, Lu
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Caffeic Acids ,Nanoparticles ,Water ,General Medicine ,Phenylethyl Alcohol ,Food Science ,Analytical Chemistry - Abstract
Caffeic acid phenethyl ester (CAPE) is an efficient bioactive polyphenol ester derived from propolis. However, its poor water solubility, bioavailability, and stability significantly limit its application. Based on the assembly properties of some natural small molecules (NSMs), asiatic acid-caffeic acid phenethyl ester nanoparticles (ASA-CAPE NPs) were prepared to overcome the above defects. After proportion optimization, the encapsulation and loading efficiencies of ASA-CAPE NPs reached 47.72 ± 0.17 % and 11.62 ± 0.42 %, respectively. Characterization results showed that ASA-CAPE NPs, mainly assembled by hydrogen bonds and hydrophobic forces, possessed regular spherical morphology with a diameter size of less than 300 nm. Additionally, ASA-CAPE NPs presented improved water solubility, stability, and bioactivities than free CAPE. Besides, ASA-CAPE NPs also exhibited good sustained release of CAPE during the gastrointestinal digestion in vitro. Above all, ASA-CAPE NPs provide a new idea for efficiently utilizing hydrophobic active compounds in the functional food field.
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- 2023
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18. P504: A universal filter enabling high throughput genomic screening
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Kalotina Machini, Limin Hao, Hana Zook, Lisa Mahanta, Heather Mason-Suares, Anna Nagy, Heidi Rehm, Sami Amr, and Matthew Lebo
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- 2023
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19. Time Constant Estimate of RC Blocks—An Iterative Method
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Kunquan Peng, Limin Hao, Yaoyao Ye, and Guoyong Shi
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- 2021
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20. A Time Constant Estimation Method for Block RC Circuits with Application to Power Grid Analysis
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Chen Dong, Limin Hao, Guoyong Shi, Zhenya Zhou, and Minghou Cheng
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- 2021
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21. Protective effect of coix seed seedling extract on
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Xue, Li, Juanjuan, Yi, Jiaqing, Zhu, Changcheng, Zhao, Yan, Cui, Yanling, Shi, Limin, Hao, and Jike, Lu
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Mice ,Oxidative Stress ,Liver ,Gamma Rays ,Plant Extracts ,Seedlings ,Superoxide Dismutase ,Coix ,Animals ,Alanine Transaminase ,Antioxidants - Abstract
Exposure to ionizing radiation (IR) can cause oxidative damage to human body, leading to various diseases and even death. In this study, the potential radioprotective effect of coix seed seedling extract (CSS-E) was studied through a model of
- Published
- 2021
22. Biochemical analysis reveals the systematic response of motion sickness mice to ginger (Zingiber officinale) extract's amelioration effect
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Wanlin Zhong, Jiaqing Zhu, Juanjuan Yi, Changcheng Zhao, Yanling Shi, Qiaozhen Kang, Jinyong Huang, Limin Hao, and Jike Lu
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Pharmacology ,Male ,Behavior, Animal ,Dose-Response Relationship, Drug ,Motion Sickness ,Plant Extracts ,Terpenes ,Fatty Acids ,Catechols ,Ginger ,Acetylcholine ,Bile Acids and Salts ,Mice ,Tandem Mass Spectrometry ,Drug Discovery ,Animals, Outbred Strains ,Animals ,Plant Oils ,Fatty Alcohols ,Sugars ,Chromatography, Liquid ,Histamine - Abstract
As a common medicinal and edible plant, Zingiber officinale Roscoe (ginger) is often used for the prevention of motion sickness. However, the mechanism of its anti-motion sickness remains to be elucidated.To explore novel treatment for motion sickness with less side effects, anti-motion sickness effect of ginger (Zingiber officinale) extract (GE) and the possible molecular mechanisms were investigated.The anti-motion sickness effect of ginger was evaluated through mice animal experimental models. Components of ginger that might contribute to the anti-motion sickness effect were analyzed by LC-MS/MS. Subsequently, biochemical analysis integrated with serum metabolomic profiling were performed to reveal the systematic response of motion sickness mice to ginger extract's amelioration effect.Exhaustive swimming time of mice in the GE group reached 8.9 min, which was 52.2% longer than that in the model group. Motion sickness index scores and time taken traversing balance beam of mice in the GE group were decreased by 53.2% and 38.5%, respectively. LC-MS/MS analysis suggested that various active ingredients in GE, such as gingerol, ginger oil and terpenoids, might contribute to its appealing anti-motion sickness activity. Biochemical analysis revealed that GE can relieve motion sickness through reducing histamine and acetylcholine release in vestibular system, regulating fatty acid oxidation, sugar metabolism and bile acid metabolism in mice.Gavage of mice with GE can effectively relieve the symptoms of autonomic nervous system dysfunction, improve the balance and coordination ability and ameliorate the ability to complete complex work after rotation stimulation. GE has attractive potential for development and utilization as novel anti-motion sickness food or drugs.
- Published
- 2021
23. The novel prolyl hydroxylase-2 inhibitor caffeic acid upregulates hypoxia inducible factor and protects against hypoxia
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Zhouliang Guo, Yang Yang, Lu Li, Qing Zhao, Yuyin Li, Zhenxing Liu, Limin Hao, Baoqiang Guo, and Aipo Diao
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Vascular Endothelial Growth Factor A ,Pharmacology ,Procollagen-Proline Dioxygenase ,Prolyl-Hydroxylase Inhibitors ,Hypoxia-Inducible Factor 1, alpha Subunit ,Hypoxia-Inducible Factor-Proline Dioxygenases ,Mice ,Neuroblastoma ,Neuroprotective Agents ,Malondialdehyde ,Humans ,Animals ,RNA, Messenger ,Lactic Acid ,Hypoxia ,Lactate Dehydrogenases ,Transcription Factors - Abstract
Hypoxia inducible factor (HIF) is a hypoxia-associated transcription factor that has a protective role against hypoxia-induced damage. Prolyl hydroxylase-2 (PHD2) is a dioxygenase enzyme that specifically hydroxylates HIF targeting it for degradation, therefore, inhibition of the PHD2 enzyme activity acts to upregulate HIF function. This study was to identify novel PHD2 inhibitors.An established fluorescence-based PHD2 activity assay was used for inhibitors screening. Western blot and quantitative real-time PCR was used to detect the protein and mRNA levels respectively. Further animal experiment was carried out.Caffeic acid was screened and identified as a novel PHD2 inhibitor. Caffeic acid treated PC12 and SH-SY5Y neuronal cell lines stabilized endogenous HIF-1α protein levels and consequently increased mRNA levels of its downstream regulated genes VEGF and EPO. Caffeic acid treatment reduced hypoxia-induced cell apoptosis and promoted HIF/BNIP3-mediated mitophagy. Moreover, animal studies indicated that caffeic acid increased the level of HIF-1α protein and mRNA levels of VEGF and EPO in the brain of mice exposed to hypoxia. Conventional brain injury markers including malondialdehyde, lactic acid and lactate dehydrogenase in the caffeic acid treated mice were shown to be reduced to the levels of the control group.This study suggests that caffeic acid inhibits PHD2 enzyme activity which then activates the hypoxia-associated transcription factor HIF leading to a neuroprotective effect against hypoxia.
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- 2022
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24. Clinical validation, implementation, and reporting of polygenic risk scores for common diseases
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Marcie A. Steeves, Prathik K. Vijay Kumar, Shruti Parpattedar, Ashley Antwi, Robert C. Green, Charles A. Brunette, Limin Hao, Manish Gala, Matthew S. Lebo, Elizabeth Hynes, Peter Kraft, Steven Lubitz, Christopher Koch, Morgan Danowski, Wanfeng Yu, Jason L. Vassy, Gabriel Berriz, Pradeep Natajaran, Anna C. F. Lewis, and Natalie Jones
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business.industry ,Medicine ,Polygenic risk score ,business ,Clinical psychology - Abstract
Implementation of polygenic risk scores (PRS) may improve disease prevention and management but requires the construction and validation of clinical assays, interpretation, and reporting pipelines. We developed a clinical genotype array-based assay for published PRS for 6 common diseases. First, we calculated PRS for 36,423 Mass General Brigham Biobank (MGBB) participants. Finding significant variation in the PRS distributions by race, we implemented adjustment for population structure with ancestry-informative principal components. We replicated published thresholds for odds ratio (OR)>2 in MGBB overall [ranging from 1.75 (1.57, 1.95) for Type 2 diabetes to 2.38 (2.07, 2.73) for breast cancer]. After confirming the high performance and robustness of the pipeline for use as a clinical assay, we analyzed the first 141 prospective samples from the Genomic Medicine at VA Study; frequency of PRS corresponding to published OR>2 ranged from 5/141 (3.6%) for colorectal cancer to 8/48 (16.7%) for breast cancer. Our development of a clinical PRS assay for multiple conditions illustrates the generalizability of this process and necessary technical and reporting decisions for meaningful clinical PRS implementation.
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- 2021
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25. Development of a clinical polygenic risk score assay and reporting workflow
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Limin, Hao, Peter, Kraft, Gabriel F, Berriz, Elizabeth D, Hynes, Christopher, Koch, Prathik, Korategere V Kumar, Shruti S, Parpattedar, Marcie, Steeves, Wanfeng, Yu, Ashley A, Antwi, Charles A, Brunette, Morgan, Danowski, Manish K, Gala, Robert C, Green, Natalie E, Jones, Anna C F, Lewis, Steven A, Lubitz, Pradeep, Natarajan, Jason L, Vassy, and Matthew S, Lebo
- Subjects
Male ,Diabetes Mellitus, Type 2 ,Risk Factors ,Humans ,Genetic Predisposition to Disease ,Prospective Studies ,Genome-Wide Association Study ,Workflow - Abstract
Implementation of polygenic risk scores (PRS) may improve disease prevention and management but poses several challenges: the construction of clinically valid assays, interpretation for individual patients, and the development of clinical workflows and resources to support their use in patient care. For the ongoing Veterans Affairs Genomic Medicine at Veterans Affairs (GenoVA) Study we developed a clinical genotype array-based assay for six published PRS. We used data from 36,423 Mass General Brigham Biobank participants and adjustment for population structure to replicate known PRS-disease associations and published PRS thresholds for a disease odds ratio (OR) of 2 (ranging from 1.75 (95% CI: 1.57-1.95) for type 2 diabetes to 2.38 (95% CI: 2.07-2.73) for breast cancer). After confirming the high performance and robustness of the pipeline for use as a clinical assay for individual patients, we analyzed the first 227 prospective samples from the GenoVA Study and found that the frequency of PRS corresponding to published OR 2 ranged from 13/227 (5.7%) for colorectal cancer to 23/150 (15.3%) for prostate cancer. In addition to the PRS laboratory report, we developed physician- and patient-oriented informational materials to support decision-making about PRS results. Our work illustrates the generalizable development of a clinical PRS assay for multiple conditions and the technical, reporting and clinical workflow challenges for implementing PRS information in the clinic.
- Published
- 2021
26. Physicochemical properties and digestibility of potato starch treated by ball milling with tea polyphenols
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He Xihong, Liming Zhang, Mengnan Li, Yujie Dai, Limin Hao, and Yaozhong Lv
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Thermogravimetric analysis ,food.ingredient ,Chemical Phenomena ,Starch ,02 engineering and technology ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Crystallinity ,food ,Differential scanning calorimetry ,Structural Biology ,Thermal stability ,Food science ,Resistant starch ,Molecular Biology ,Potato starch ,Ball mill ,Solanum tuberosum ,030304 developmental biology ,0303 health sciences ,Tea ,Spectrum Analysis ,Polyphenols ,food and beverages ,General Medicine ,021001 nanoscience & nanotechnology ,chemistry ,Thermogravimetry ,0210 nano-technology - Abstract
Native potato starch (NPS) with tea polyphenols (TPs) was treated in a planetary ball mill, and the effects of co-grinding on properties and digestibility of starch were studied. The X-ray diffraction (XRD) results showed that the crystal structure of starch granules was destroyed after 7 h of ball grinding, and their crystallinity degree reduced from 38.1% to 8.3%. The scanning electron microscopy (SEM) analyses indicated that the damaged starch granules and TPs displayed agglomerates after 7 h of milling. The Fourier-transform infrared spectroscopy (FT-IR), thermogravimetric analysis (TGA), and differential scanning calorimetry (DSC) results demonstrated the existence of an interaction between starch chains and TPs, which improved the thermal stability and gelatinization temperatures of starch. The ball-milled starches with different amount of TPs showed significant variability to in vitro digestion (the contents of slowly digestible starch and resistant starch). Therefore, the produced ball-milled mixtures may be a desired dietary product for postprandial glycemic control.
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- 2019
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27. Effects of β-cyclodextrin on the enzymatic hydrolysis of hemp seed oil by lipase Candida sp.99–125
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Xin Liu, Limin Hao, Pei Wang, Jike Lu, Qiaozhen Kang, Zhaodi Ke, and Juanjuan Yi
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0106 biological sciences ,chemistry.chemical_classification ,Chromatography ,Cyclodextrin ,biology ,010405 organic chemistry ,01 natural sciences ,0104 chemical sciences ,Absorbance ,Hydrolysis ,Ultraviolet visible spectroscopy ,chemistry ,Enzymatic hydrolysis ,Yield (chemistry) ,biology.protein ,Thermal stability ,Lipase ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
To enhance the stability of lipases, the additive method is attractive because of its high efficiency and simplicity, of which β-cyclodextrin (β-CD), as an additive has attracted attention. In the present study, the effects of β-CD on enzymatic hydrolysis of hemp seed oil by lipases were investigated. The stability, spectroscopy, and reusability of Candida sp.99–125 were compared by the addition of β-CD, respectively. The results showed that Candida sp.99–125 could produce the highest yield of α-linolenic acid (ALA, 18.27%, w/w) in the presence of β-CD after 24h, and the thermal stability of lipase was also improved. The UV spectroscopy showed that the absorbance of lipase decreased with increasing concentrations of β-CD and the fluorescence result was similar. Moreover, the reusability of lipase with β-CD was better than free lipase. This study revealed that β-CD could increase hydrolysis activity and stability of the lipase, thereby improving the hydrolytic process of hemp seed oil by Candida sp.99–125.
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- 2019
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28. Potential of natural products as radioprotectors and radiosensitizers: opportunities and challenges
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Nana Cao, Jike Lu, Keke Suo, Jiaqing Zhu, Qiaozhen Kang, Xiaomiao Zhang, Juanjuan Yi, Limin Hao, and Changcheng Zhao
- Subjects
0301 basic medicine ,Radiation-Sensitizing Agents ,medicine.medical_treatment ,Tumor cells ,Radiation-Protective Agents ,03 medical and health sciences ,0302 clinical medicine ,Alkaloids ,Radiation Protection ,Polysaccharides ,Neoplasms ,medicine ,Animals ,Humans ,Radiation sensitization ,Biological Products ,business.industry ,Polyphenols ,General Medicine ,Saponins ,Radiation therapy ,030104 developmental biology ,030220 oncology & carcinogenesis ,Cancer research ,business ,Clinical evaluation ,Food Science - Abstract
Natural products can be used as natural radiosensitizers and radioprotectors, showing promising effects in cancer treatments in combination with radiotherapy, while reducing ionizing radiation (IR) damage to normal cells/tissues. The different effects of natural products on irradiated normal and tumor cells/tissues have attracted more and more researchers’ interest. Nonetheless, the clinical applications of natural products in radiotherapy are few, which may be related to their low bioavailability in the human body. Here, we displayed the radiation protection and radiation sensitization of major natural products, highlighted the related molecular mechanisms of these bioactive substances combined with radiotherapy to treat cancer, and critically reviewed their deficiency and improved measures. Lastly, several clinical trials were presented to verify the clinical application of natural products as radiosensitizers and radioprotectors. Further clinical evaluation is still needed. This review provides a reference for the utilization of natural products as radiosensitizers and radioprotectors.
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- 2021
29. Radioprotective effect of radiation-induced Lactococcus lactis cell-free extract against
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Keke, Suo, Sisi, Chen, Xue, Li, Xin, Liu, Juanjuan, Yi, Jiaqing, Zhu, Laizheng, Lu, Limin, Hao, Qiaozhen, Kang, and Jike, Lu
- Subjects
Cell Extracts ,Lactococcus lactis ,Mice ,Oxidative Stress ,Liver ,Animals ,Radiation-Protective Agents ,Hydrogen Peroxide ,Antioxidants - Abstract
Ionizing radiation (IR) is widely used in the diagnosis and treatment of various cancers. However, IR can cause damage to human health by producing reactive oxygen species. Lactococcus lactis is a type of microorganism that is beneficial to human health and has a strong antioxidant capacity. In this study, the protective effect of normal and IR-induced L. lactis IL1403 cell-free extracts (CFE and IR-CFE, respectively) against oxidative damage in vitro and the radioprotective effect of IR-CFE in vivo was evaluated using
- Published
- 2021
30. Production of functional recombinant prolyl hydroxylase-2 enzyme in insect cells for small molecule inhibitor screening studies
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Zhouliang, Guo, Jiayu, Zi, Yanfei, Hao, Yuyin, Li, Zhenxing, Liu, Qing, Zhao, Limin, Hao, and Aipo, Diao
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Insecta ,Procollagen-Proline Dioxygenase ,Animals ,Humans ,Prolyl Hydroxylases ,Recombinant Proteins ,Dioxygenases ,Hypoxia-Inducible Factor-Proline Dioxygenases ,Biotechnology - Abstract
Prolyl hydroxylase-2 (PHD2) is a dioxygenase enzyme that specifically hydroxylates the hypoxia inducible factor (HIF) which then targets it for degradation in oxygenated cells. Inhibition of the activity of the PHD2 enzyme under hypoxic environmental conditions acts to upregulate HIF. Thus, PHD2 inhibitors may serve as a promising treatment for HIF-dependent diseases. In this study, recombinant PHD2 protein was successfully expressed using a baculovirus-insect cell expression secretory system. PHD2 was purified and in combination with bacterially expressed functional von Hippel Lindau protein-elongin B-elongin C (VBC) protein complex was used to successfully develop a fluorescence-based PHD2 activity assay. Myricetin was identified as a novel potent PHD2 inhibitor by high-throughput screening of a natural compound library. Further studies showed that treatment of human neuroblastoma SH-SY5Y cells with Myricetin increased HIF-1α protein levels. These results indicate that the insect cell expression system is capable of producing highly active recombinant PHD2 protein from which a fluorescence-based activity assay can be developed for high-throughput screening applications.
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- 2022
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31. Wound-healing activity of glycoproteins from white jade snail (Achatina fulica) on experimentally burned mice
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Yinxin Cui, Yiming Song, Limin Hao, Jiaqing Zhu, Juanjuan Yi, Jike Lu, Jinyong Huang, and Qiaozhen Kang
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DPPH ,Gastropoda ,Snails ,02 engineering and technology ,Snail ,Polysaccharide ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,Structural Biology ,Polysaccharides ,biology.animal ,parasitic diseases ,Animals ,Molecular Biology ,030304 developmental biology ,Glycoproteins ,chemistry.chemical_classification ,0303 health sciences ,Wound Healing ,biology ,Traditional medicine ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Chromatography, Ion Exchange ,Mucus ,Achatina ,chemistry ,Economic issue ,Female ,Medicine, Traditional ,0210 nano-technology ,Glycoprotein ,Wound healing ,Burns - Abstract
Burns are a global public health problem and the treatment of burn wounds is a major medical and economic issue. White jade snails (Achatina fulica) are now widely distributed in Asia, and they have been used to treat burns in folk medicine of China. In this study, the glycoproteins from white jade snails were investigated and their effect on burn healing was evaluated by a mouse burn model. The results showed that the snail mucus was mainly composed of proteins and polysaccharides, and it had good adhesion. The main component of snail mucus was glycoprotein from the results of DEAE Sepharose FF ion exchange chromatography. The 2,2-Diphenyl-1-picrylhydrazyl (DPPH) free radical scavenging effect of 1 mg/mL snail mucus reached 13.77%. The wound healing rate of the snail mucus group was higher than that of the control group (p 0.0001). Histopathological results showed that mice in the snail mucus group had a faster healing than that of the control group. The biochemical analysis was in agreement with the histopathological findings. These results suggested that glycoproteins from snail mucus showed effective wound healing activities in the skin of experimentally burned mice.
- Published
- 2020
32. Bioinformatics in Clinical Genomic Sequencing
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Arti Singh, Matthew S. Lebo, Chiao-Feng Lin, and Limin Hao
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Annotation ,Whole Genome Sequencing ,Genomic sequencing ,Biochemistry (medical) ,Clinical Biochemistry ,Computational Biology ,Humans ,General Medicine ,Computational biology ,Sequence Analysis, DNA ,Biology ,DNA sequencing ,Exome sequencing - Published
- 2020
33. Hydroxypropyl β-cyclodextrin improving multiple stresses tolerance of Lactococcus lactis subsp. lactis
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Xin Liu, Songyang Lin, Lianming Cui, Qiaozhen Kang, Jike Lu, Yizhi Ji, Zhenyu Ji, Limin Hao, Laizheng Lu, and Juanjuan Yi
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Hot Temperature ,beta-Cyclodextrins ,Sodium Chloride ,Trehalose ,law.invention ,Culture Media ,Lactococcus lactis subsp. lactis ,Lactococcus lactis ,Probiotic ,chemistry.chemical_compound ,Starter ,chemistry ,law ,Fermentation ,Cell structure ,Stress conditions ,Food science ,Hydroxypropyl β cyclodextrin ,Food Science - Abstract
L. lactis is known as industrial starter in the fermentation of dairy and meat products, and it plays an important role in human health as an edible probiotic. During industrial production, L. lactis often experiences different stresses that delay the growth and decrease the survival in some serious conditions. In this study, the protective effects of hydroxypropyl β-cyclodextrin (HP β-CD) on L. lactis under multiple stresses were investigated. The microbial cells were treated with different stresses including heat, NaCl, cold, and H2 O2 stresses, and the results were showed by measuring the OD600 or spot plating method. The growth and tolerance were improved when HP β-CD was added during different stress conditions, better than that of trehalose. Besides, the scanning electron microscopic and fluorescence spectrum studies showed that HP β-CD could combine with L. lactis to protect the cell structure, suggesting that HP β-CD may act as a protective agent of L. lactis. Therefore, HP β-CD could be considered as a potential protective agent to be applied in food industry, and its protective mechanism on L. lactis still needs further investigation.
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- 2020
34. Corrigendum to 'Radioprotective effect of radiation-induced Lactococcus lactis cell-free extract against 60Coγ injury in mice' (J. Dairy Sci. 104:9532–9542)
- Author
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Keke Suo, Sisi Chen, Xue Li, Xin Liu, Juanjuan Yi, Jiaqing Zhu, Laizheng Lu, Limin Hao, Qiaozhen Kang, and Jike Lu
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Genetics ,Animal Science and Zoology ,Food Science - Published
- 2022
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35. Antioxidant properties and digestion behaviors of polysaccharides from Chinese yam fermented by Saccharomyces boulardii
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Jiaqing Zhu, Yiwen Shao, Juanjuan Yi, Limin Hao, Jinyong Huang, Shiru Jia, Jike Lu, Chang-Cheng Zhao, and Qiaozhen Kang
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chemistry.chemical_classification ,Antioxidant ,biology ,Chemistry ,medicine.medical_treatment ,biology.organism_classification ,Polysaccharide ,In vitro ,law.invention ,Probiotic ,law ,medicine ,Fermentation ,Dioscorea ,Food science ,Digestion ,Food Science ,Saccharomyces boulardii - Abstract
A kind of novel polysaccharides from Chinese yam (Dioscorea opposita Thunb.) was prepared by fermentation with a fungal probiotic Saccharomyces boulardii. The preparation methods and parameters of fermented Chinese yam polysaccharides (FCYP) were optimized. Molecular weight and FT-IR spectrum of the optimized FCYP were also evaluated, along with its biological activities and digestion behaviors. Results showed that FCYP distributed in fermentation supernatant possessed the best total reducing power. On this basis, the highly active FCYP was obtained under the optimal fermentation conditions: fermentation time of 36 h, inoculation volume of 6% and solid-liquid ratio of 1:25 g/mL. Compared with unfermented Chinese yam polysaccharides (UCYP), the molecular weight of FCYP decreased prominently, accompanied with a significant increase of in vitro antioxidant activity. Meanwhile, FCYP also exhibited a favorable radioprotective effect at the cellular level. After in vitro simulated gastrointestinal digestion, FCYP remained relatively well bioactive stability, with lower molecular weight and the occurrence of lamellar morphological structure. Overall, Chinese yam polysaccharides fermented by S. boulardii were obtained with easier digestion and better functionality properties including antioxidant activity and radioprotection effect, which could be considered as one of health food components.
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- 2022
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36. Discussion on Surface Quality and Precision Control of Metal Materials in Machining Process
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Limin Hao
- Subjects
History ,Computer Science Applications ,Education - Abstract
Based on the analysis of the influence of the surface quality of metal materials on the use of machinery, this paper discusses the influence of raw material quality, technical level, residual stress, cold work hardening, machine tool machining error, cutting tool machining error, mechanical positioning error and mechanical adjustment error on the surface quality and machining accuracy of metal materials. By studying the measures such as strengthening the quality control of raw materials, reasonably selecting processing technology, controlling the processing process, reducing the original error and making error compensation, the aim is to optimize the machining environment and improve the processing quality of finished products.
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- 2022
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37. Extraction, characterization and biological activity of sulfated polysaccharides from seaweed Dictyopteris divaricata
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Juan Du, Qiaozhen Kang, Xin Liu, Limin Hao, Jike Lu, Shufang Li, Yinxin Cui, and DaHai Gao
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02 engineering and technology ,Xylose ,Phaeophyta ,Polysaccharide ,01 natural sciences ,Biochemistry ,Mice ,Ingredient ,chemistry.chemical_compound ,Picrates ,Polysaccharides ,Structural Biology ,Animals ,Immunologic Factors ,Response surface methodology ,Molecular Biology ,chemistry.chemical_classification ,Chromatography ,biology ,Hydroxyl Radical ,Sulfates ,010405 organic chemistry ,Biphenyl Compounds ,Monosaccharides ,Extraction (chemistry) ,Biological activity ,General Medicine ,Seaweed ,021001 nanoscience & nanotechnology ,biology.organism_classification ,0104 chemical sciences ,Brown algae ,RAW 264.7 Cells ,chemistry ,Galactose ,0210 nano-technology - Abstract
Dictyopteris divaricata is a kind of important brown algae with many biological activities. It has been receiving more and more attention, yet there are rarely studies done on its polysaccharides. In this study, the optimum extraction and biological activity of seaweed polysaccharides from Dictyopteris divaricata (DDSP) were investigated. Response surface methodology (RSM), based on a three-level, three-variable Box-Behnken design (BBD), was employed to obtain the best possible combinations for maximum polysaccharides yield. The optimum extraction conditions were as follows: liquid-solid ratio of 110 mL/g, extraction time of 6 h and extraction temperature of 100 °C. Under these conditions, the experimental yield was 3.05%, which was in close agreement with the predicted value of 3.15%. The average molecular weight of DDSP was 58.05 kDa. Gas chromatograph (GC) results showed that DDSP was composed of fucose, xylose, mannose, glucose and galactose with the corresponding molar ratio of 4.45:2.74:1.00:2.94:1.35. Biological activity showed that DDSP exhibited strong antioxidant activity in vitro and possessed the potential on stimulating immune response of RAW264.7 cells. So DDSP can be used as a natural ingredient in functional foods.
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- 2018
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38. A comprehensive genome report for COVID-19 patients: GENCOV Study Canada
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William J. Lane, Sunakshi Chowdhary, Hanna Faghfoury, Limin Hao, Lisa J. Strug, Yvonne Bombard, Selina Casalino, Matthew S. Lebo, Jennifer Taher, Jared T. Simpson, Erika Frangione, Jordan Lerner-Ellis, Trevor J. Pugh, and Chloe Mighton
- Subjects
2019-20 coronavirus outbreak ,Laboratory Genetics and Genomics ,Endocrinology ,Coronavirus disease 2019 (COVID-19) ,Endocrinology, Diabetes and Metabolism ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Genetics ,Computational biology ,Biology ,Molecular Biology ,Biochemistry ,Genome - Published
- 2021
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39. Performance tailorable terpolymers synthesized from carbon dioxide, phthalic anhydride and propylene oxide using Lewis acid-base dual catalysts
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Yuezhong Meng, Limin Hao, Wei Liu, Congxiao Fan, Wenjing Wang, Min Xiao, Shuanjin Wang, Jiaxin Liang, Yan Cui, Shuxian Ye, and Dongmei Han
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Phthalic anhydride ,Materials science ,Organic base ,Process Chemistry and Technology ,02 engineering and technology ,Borane ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,chemistry ,Polymer chemistry ,Propylene carbonate ,Chemical Engineering (miscellaneous) ,Propylene oxide ,Lewis acids and bases ,0210 nano-technology ,Selectivity ,Waste Management and Disposal - Abstract
Bulk terpolymerization of carbon dioxide and phthalic anhydride with propylene oxide is successfully carried out using metal-free and economical Lewis pairs under mild conditions. A series of commercial organic bases are coupled with triethyl borane (TEB) as Lewis pairs to optimize the activity and the results show that the TEB/ bis(triphenylphosphine)iminium chloride (PPNCl) pair exhibits relatively high activity and selectivity. The impact of the molar ratio of TEB to organic bases, reaction temperature and CO2 pressure as well as the catalyst loading on the activity and selectivity of the copolymerization are investigated. Particularly, the turnover frequency reaches 164 h−1 with a TEB/PPNCl molar ratio of 2/1 at 80 °C. To our delight, the poly(ester-co-carbonate)s with random or block structures can be simply tuned by choosing different organic bases coupled with TEB. In these cases, the resultant terpolymers with comprehensive properties can be readily synthesized. As expected, the incorporation of phthalic anhydride effectively modifies the thermal and mechanical properties of commercial poly(propylene carbonate) (PPC). Terpolymers named as PPC-P with 43 mol% aromatic polyester moieties displays a glass transition temperature (Tg) of 47 °C, about 9 °C higher than that of commercial PPC, and gives a tensile strength higher than 37.6 MPa. To our delight, the synthesized PPC-P exhibits satisfactory degradation speed under standard composting condition compared with commercial PBAT and PPC.
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- 2021
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40. Quality Evaluation of Lepidium meyenii (Maca) Based on HPLC and LC-MS Analysis of its Glucosinolates from Roots
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Jie Cao, Kang Caicai, Limin Hao, and Liming Zhang
- Subjects
Chromatography ,Lepidium meyenii ,010405 organic chemistry ,Chemistry ,010401 analytical chemistry ,Glucotropaeolin ,Glucolimnanthin ,01 natural sciences ,Applied Microbiology and Biotechnology ,High-performance liquid chromatography ,0104 chemical sciences ,Analytical Chemistry ,Liquid chromatography–mass spectrometry ,Safety, Risk, Reliability and Quality ,Safety Research ,Food Science - Abstract
In order to evaluate the quality of maca samples, 15 batches of maca hypocotyls from different geographical origins were analyzed by using HPLC and liquid chromatography tandem mass spectrometry (LC-MS). Their glucosinolates (GLs) were identified, profiled, and quantified. Three aromatic GLs, glucosinalbin (GSB), glucotropaeolin (GTL), and glucolimnanthin (GLH), were identified from maca roots. It was found that the HPLC profiles of maca samples showed a similar qualitative pattern except for some differences in their contents. The amount ranges (μmol g−1, DW) of GSB, GTL, and GLH were 2.62–5.55, 12.99–57.12, and 3.15–12.12, respectively. Furthermore, a HCA (hierarchical clustering analysis) was used to classify the quality of maca samples according to their cultivated sources and GLs contents. The results showed that the combination of GSB, GTL, and GLH could be a marker for accurate determination and quality control of maca samples. It was concluded that the multi-component analysis in combination with HCA could be a supplement to assess the quality of maca materials.
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- 2017
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41. Effects of wheat peptide supplementation on anti-fatigue and immunoregulation during incremental swimming exercise in rats
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Ping Qian, Limin Hao, Zhiqiang Zheng, Jin Liu, Xiaoxue Yang, Zhenyu Wang, and Shuntang Guo
- Subjects
0301 basic medicine ,chemistry.chemical_classification ,medicine.medical_specialty ,biology ,General Chemical Engineering ,Glutathione peroxidase ,Skeletal muscle ,Peptide ,General Chemistry ,Malondialdehyde ,Acetylcholinesterase ,Small intestine ,In vitro ,Superoxide dismutase ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Endocrinology ,medicine.anatomical_structure ,chemistry ,Biochemistry ,Internal medicine ,biology.protein ,medicine - Abstract
This study elucidated the effects of wheat peptide administration on anti-fatigue and immunoregulation functions in rats. Wheat peptides were separated and the fraction with the highest radical scavenging activity in vitro was subjected to mass spectrometry to identify the peptide sequences. Sixty rats were randomized into 5 groups: no exercise control group (C), no exercise with low dose [20 mg kg−1 d−1] group (M), exercise control group (E), exercise with low dose group (Z), and exercise with high dose [100 mg kg−1 d−1] group (D). After training for 4 weeks with incremental swimming exercise, bodyweight and exhaustive time were tested and serum, small intestine, skeletal muscle and brain tissues of the rats were collected. A total of four peptide sequences from the highest active fraction were identified. The exhaustive time of group D was significantly longer than groups E and Z. The malondialdehyde content of group M was significantly lower than group C (p < 0.01), but secretory immunoglobulin A and 5-hydroxytryptamine (5-HT) were higher (both p < 0.01). Compared to group E, the activities of superoxide dismutase in skeletal muscle and acetylcholinesterase were significantly higher in groups Z and D (p < 0.01 or 0.05), but caspase-3 was lower (p < 0.01). Glutathione peroxidase and 5-HT in group D were both significantly higher than in group E (p < 0.01 or 0.05), but interleukin-6 and interleukin-8 were lower (P < 0.05). Supplementation of wheat peptide could effectively improve the ability of one-time exhaustive exercise of rats, remove free radicals from skeletal muscle in time, and alleviate the intestinal and blood inflammatory responses.
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- 2017
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42. Radioprotection of EGCG based on immunoregulatory effect and antioxidant activity against
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Juanjuan, Yi, Chen, Chen, Xin, Liu, Qiaozhen, Kang, Limin, Hao, Jinyong, Huang, and Jike, Lu
- Subjects
Male ,Mice ,Radiation Injuries, Experimental ,Body Weight ,Animals ,Radiation-Protective Agents ,Organ Size ,Cobalt Radioisotopes ,Oxidation-Reduction ,Antioxidants ,Catechin ,Monocytes ,Spleen - Abstract
Excessive reactive oxygen radicals (ROS) produced by ionizing radiation (IR) can cause human body to serious oxidative damage, leading to oxidation-reduction (REDOX) system imbalance and immune system damage. Here, the radioprotection of EGCG was studied through a model of oxidative damage in
- Published
- 2019
43. EGCG enhances cancer cells sensitivity under
- Author
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Qiaozhen, Kang, Xiaomiao, Zhang, Nana, Cao, Chen, Chen, Juanjuan, Yi, Limin, Hao, Yizhi, Ji, Xin, Liu, and Jike, Lu
- Subjects
Radiation-Sensitizing Agents ,Caspase 3 ,Down-Regulation ,Apoptosis ,Radiation-Protective Agents ,Catechin ,Up-Regulation ,Mice ,MicroRNAs ,Proto-Oncogene Proteins c-bcl-2 ,Sirtuin 1 ,Gamma Rays ,Cell Line, Tumor ,Animals ,Cobalt Radioisotopes ,Tumor Suppressor Protein p53 ,Signal Transduction ,bcl-2-Associated X Protein - Abstract
Ionizing radiation (IR) resistance and toxicity to normal cells are the main problems in radiotherapy for cancer. In this study, we demonstrated that epigallocatechin gallate (EGCG) could inhibit effectively IR-induced damage to mouse normal hepatic cells AML-12, and improve dramatically the radiosensitivity of mouse hepatoma cells H22 to
- Published
- 2019
44. Development of a clinical assay for reporting polygenic risk scores
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Morgan Danowski, Gabriel Berriz, Matthew S. Lebo, Marcie A. Steeves, Jason L. Vassy, Wanfeng Yu, Anna C. F. Lewis, Christopher Koch, Limin Hao, Prathik K. Vijay Kumar, Shruti Parpattedar, and Peter Kraft
- Subjects
Oncology ,medicine.medical_specialty ,Endocrinology ,business.industry ,Endocrinology, Diabetes and Metabolism ,Internal medicine ,Genetics ,medicine ,Polygenic risk score ,business ,Molecular Biology ,Biochemistry - Published
- 2021
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45. Anti-fatigue activity of hemp leaves water extract and the related biochemical changes in mice
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Jinyong Huang, Liming Zhang, Zongzhen Wang, Guojun Zhang, Yan Cui, Jiaqing Zhu, Juanjuan Yi, Limin Hao, Jike Lu, Qiaozhen Kang, and Zheng Zhiqiang
- Subjects
Male ,Antioxidant ,medicine.medical_treatment ,Toxicology ,Blood lactic acid ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Physical Conditioning, Animal ,Rhodiola ,medicine ,Animals ,Lactic Acid ,Food science ,Muscle, Skeletal ,Fatigue ,Swimming ,Cannabis ,030304 developmental biology ,chemistry.chemical_classification ,Glutathione Peroxidase ,0303 health sciences ,biology ,Glycogen ,Plant Extracts ,Chemistry ,Water ,04 agricultural and veterinary sciences ,General Medicine ,Glutathione ,biology.organism_classification ,040401 food science ,Lactic acid ,Plant Leaves ,Enzyme ,Gene Expression Regulation ,biology.protein ,Female ,Food Science ,Peroxidase - Abstract
To explore novel sources of anti-fatigue drugs and food, the anti-fatigue activity of hemp leaves water extract (HLWE) was investigated through exhaustive swimming tests of mice. The median exhaustion swimming time of mice gavaged with HLWE reached 55.4 min, which was 156.8% and 87.8% longer than that of the control group and Rhodiola group, respectively. Then, several biochemical parameters related to fatigue were determined to explore the possible anti-fatigue reasons. The blood lactic acid concentration of mice in HLWE group was 0.76 mmol/L, which was 24.8% lower than that in the control group. Compared with the control group, the glutathione peroxidases activity of mice in HLWE group increased by 296.2%. Based on the results, HLWE exhibited outstanding anti-fatigue activity through reducing the accumulation of lactic acid and improving the activities of defense antioxidant enzymes. It shows appealing potential for development and utilization as novel anti-fatigue food or drugs.
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- 2021
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46. Radiosensitization potential of caffeic acid phenethyl ester and the long non-coding RNAs in response to 60Coγ radiation in mouse hepatoma cells
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Limin Hao, Xiaomiao Zhang, Zhenyu Ji, Juanjuan Yi, Qiaozhen Kang, Jike Lu, Jiaqing Zhu, and Ting Wang
- Subjects
chemistry.chemical_classification ,Reactive oxygen species ,Radiosensitizer ,Radiation ,010308 nuclear & particles physics ,Chemistry ,Cancer ,Cell cycle ,medicine.disease ,01 natural sciences ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Apoptosis ,0103 physical sciences ,medicine ,Cancer research ,Viability assay ,KEGG ,Caffeic acid phenethyl ester - Abstract
Radiation therapy has been reported as an effective treatment for cancer, yet it has multiple side effects. Thus, it is necessary to develop some non-toxic or low-toxic natural radiosensitizers. Caffeic acid phenethyl ester (CAPE) is widely studied due to various biological activities including radiosensitization effects. However, the radiosensitization effects of CAPE related to the expression of long non-coding RNAs (lncRNAs) are still unclear. In this study, we investigated the antitumor effects of CAPE in combination with 60Coγ radiation against mouse hepatoma (H22) cells, indicating that CAPE has the radiosensitization potential by detecting cell viability, cell cycle, apoptosis and the level of reactive oxygen species (ROS). Furthermore, the differentially expressed lncRNAs (DElncRNAs) induced by 60Coγ radiation were further identified through high throughput sequencing in H22 cells. A total of 46 DElncRNAs were identified, including 24 up-regulated and 22 down-regulated lncRNAs. Then, the representative lncRNAs (LNC-004553, LNC-000751 and LNC-000561) were selected by Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and finally verified using quantitative Real Time-polymerase chain reaction (qRT-PCR). Results confirmed that CAPE is a potential natural radiosensitizer during radiotherapy for liver cancer, and the identified lncRNAs may be the new targets for future treatment of the radiosensitization response activated by CAPE.
- Published
- 2021
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47. MiRNA expression profile of ionizing radiation-induced liver injury in mouse using deep sequencing
- Author
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Zhiqiang Zheng, Zhenyu Wang, Limin Hao, Naixun Zhang, Chen Chen, and Jike Lu
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0301 basic medicine ,Genetics ,Small RNA ,Cell Biology ,General Medicine ,Biology ,Genome ,Deep sequencing ,Gene expression profiling ,03 medical and health sciences ,030104 developmental biology ,microRNA ,Genomic library ,KEGG ,Gene - Abstract
In order to investigate the potential regulatory roles of microRNAs (miRNAs) in mouse response to ionizing radiation (IR), the small RNA libraries from liver tissues of mice with or without ionizing radiation (IR) were sequenced by high-throughput deep sequencing technology. A total of 270 miRNAs including 212 known and 58 potentially novel miRNAs were identified. Within these miRNAs, there were 48 miRNAs that were differentially expressed, including 27 known and 21 novel miRNAs. The results of quantitative RT-polymerase chain reaction (qRT-PCR) were in consistent with the sequencing analysis. Target gene prediction, function annotation, and pathway of the identified miRNAs were analyzed using RNAhybrid, miRanda software and Swiss-Prot, Gene Ontology (GO), Clusters of Orthologous Groups (COG), Kyoto Encyclopedia of Genes, and Genomes (KEGG) and non-redundant (NR) databases. These results should be useful to investigate the biological function of miRNAs under IR-induced liver injury.
- Published
- 2016
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48. Transcriptional Reactivation of OTX2, RX1 and SIX3 during Reprogramming Contributes to the Generation of RPE Cells from Human iPSCs
- Author
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Tao Li, Peng Li, Ruimin Ge, Li Shen, Mingzhi Zhang, Shuo Han, Ruizhi Li, Yinan Liu, Haojie Sun, Xiaofeng Sun, Zhizhong Ma, Limin Hao, Yanling Ma, and Ying Jin
- Subjects
0301 basic medicine ,Chromatin Immunoprecipitation ,induced pluripotent stem cells ,Kruppel-Like Transcription Factors ,retinal pigment epithelium ,Nerve Tissue Proteins ,Biology ,Real-Time Polymerase Chain Reaction ,Applied Microbiology and Biotechnology ,Proto-Oncogene Proteins c-myc ,Kruppel-Like Factor 4 ,03 medical and health sciences ,Directed differentiation ,SOX2 ,epigenetic modification ,Humans ,Eye Proteins ,Induced pluripotent stem cell ,Molecular Biology ,Transcription factor ,Cells, Cultured ,Ecology, Evolution, Behavior and Systematics ,Homeodomain Proteins ,Otx Transcription Factors ,SOXB1 Transcription Factors ,reprogramming ,Cell Differentiation ,Cell Biology ,Cellular Reprogramming ,Molecular biology ,eye diseases ,030104 developmental biology ,DNA demethylation ,KLF4 ,sense organs ,Octamer Transcription Factor-3 ,Chromatin immunoprecipitation ,Reprogramming ,Research Paper ,Developmental Biology - Abstract
Directed differentiation of human induced pluripotent stem cells (iPSCs) into retinal pigmented epithelium (RPE) holds great promise in cell replacement therapy for patients suffering from degenerative eye diseases, including age-related macular degeneration (AMD). In this study, we generated iPSCs from human dermal fibroblasts (HDFs) by electroporation with episomal plasmid vectors encoding OCT4, SOX2, KLF4, L-MYC together with p53 suppression. Intriguingly, cell reprogramming resulted in a metastable transcriptional activation and selective demethylation of neural and retinal specification-associated genes, such as OTX2, RX1 and SIX3. In contrast, RPE progenitor genes were transcriptionally silent in HDFs and descendant iPSCs. Overexpression of OCT4 and SOX2 directly stimulated the expression of OTX2, RX1 and SIX3 in HDFs and iPSCs. Luciferase and chromatin immunoprecipitation (ChIP) assays further identified an OCT4- and two SOX2-binding sites located in the proximal promoter of OTX2. Histone acetylation and methylation on the local promoter also participated in the reactivation of OTX2. The transcriptional conversion of RX1 and SIX3 genes partially attributed to DNA demethylation. Subsequently, iPSCs were induced into the RPE cells displaying the characteristics of polygonal shapes and pigments, and expressing typical RPE cell markers. Taken together, our results establish readily efficient and safe protocols to produce iPSCs and iPSC-derived RPE cells, and underline that the reactivation of anterior neural transcription factor OTX2, eye field transcription factor RX1 and SIX3 in iPSCs is a feature of pluripotency acquisition and predetermines the potential of RPE differentiation.
- Published
- 2016
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49. Comparative study on the bioactive components and in vitro biological activities of three green seedlings
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Jiaqing Zhu, Juanjuan Yi, Jinyong Huang, Limin Hao, Jike Lu, Zhenyu Ji, Xue Li, Qiaozhen Kang, and Pei Wang
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Antioxidant ,DPPH ,medicine.medical_treatment ,Flavonoid ,01 natural sciences ,Cell Line ,Analytical Chemistry ,Mice ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Functional food ,otorhinolaryngologic diseases ,medicine ,Animals ,Food science ,Coix ,Cell Proliferation ,Flavonoids ,chemistry.chemical_classification ,ABTS ,biology ,Plant Extracts ,Aminobutyrates ,010401 analytical chemistry ,Polyphenols ,food and beverages ,04 agricultural and veterinary sciences ,General Medicine ,biology.organism_classification ,040401 food science ,0104 chemical sciences ,chemistry ,Seedlings ,Seedling ,Polyphenol ,Seeds ,Food Science - Abstract
To explore functional food ingredients from green seedlings, the bioactive components (phenolic compounds and γ-aminobutyric acid) and antioxidant activities (DPPH radical scavenging ability, ABTS radical scavenging ability and reducing power) of three green seedlings, including coix seed seedling (CSS), highland barely seedling (HBS) and naked oats seedling (NOS) cultivars were respectively measured and deeply compared. Results indicated that CSS showed the highest contents of the total polyphenol (183.35 mg/100 g), total flavonoid (348.68 mg/100 g), and γ-aminobutyric acid (54.17 mg/100 g). As expected, CSS also exerted the highest level of antioxidant activity, followed by HBS and NOS. Moreover, CSS possessed the potential of stimulating immune responses, including promoting proliferation and strengthening phagocytosis function of RAW264.7 cells. Taken together, all results suggested that the three green seedlings, especially CSS could be used as natural ingredients for functional food.
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- 2020
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50. Radioprotection of EGCG based on immunoregulatory effect and antioxidant activity against 60Coγ radiation-induced injury in mice
- Author
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Qiaozhen Kang, Jike Lu, Limin Hao, Juanjuan Yi, Chen Chen, Jinyong Huang, and Xin Liu
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Antioxidant ,medicine.medical_treatment ,Spleen ,Pharmacology ,Toxicology ,Lipid peroxidation ,Superoxide dismutase ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Immune system ,medicine ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,biology ,Glutathione peroxidase ,04 agricultural and veterinary sciences ,General Medicine ,Glutathione ,Malondialdehyde ,040401 food science ,medicine.anatomical_structure ,chemistry ,biology.protein ,Food Science - Abstract
Excessive reactive oxygen radicals (ROS) produced by ionizing radiation (IR) can cause human body to serious oxidative damage, leading to oxidation-reduction (REDOX) system imbalance and immune system damage. Here, the radioprotection of EGCG was studied through a model of oxidative damage in 60Coγ radiation mice. Firstly, the weights and the main organs indexes of mice, including the liver index, spleen index and pancreas index, indicated preliminarily the safety and protection of EGCG. Then, the radioprotection of EGCG based on immune-regulation on radiation mice was further investigated. Results suggested that EGCG could prevent significantly the immune system damage caused by 60Coγ via increasing the immune organ index, inducing the transformation of spleen cells into T- and B-lymphocytes, and enhancing the macrophage phagocytosis, compared with model group. In addition, EGCG could also protect spleens of radiation mice from 60Coγ-induced the imbalance of REDOX system by enhancing the activities of antioxidant enzymes superoxide dismutase (SOD) and glutathione peroxidase (GSH-Px), increasing the level of glutathione (GSH), suppressing lipid peroxidation (Malondialdehyde, MDA). The antioxidant enzymes activities of serum and livers were also increased markedly. Taken together, our results indicated that EGCG possessed the excellent potential to serve as a natural radioprotector against IR-induced damage.
- Published
- 2020
- Full Text
- View/download PDF
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