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Animal re-identification based on image data, either recorded manually by photographers or automatically with camera traps, is an important task for ecological studies about biodiversity and conservation that can be highly automatized with algorithms from computer vision and machine learning. However, fixed identification models only trained with standard datasets before their application will quickly reach their limits, especially for long-term monitoring with changing environmental conditions, varying visual appearances of individuals over time that differ a lot from those in the training data, and new occurring individuals that have not been observed before. Hence, we believe that active learning with human-in-the-loop and continuous lifelong learning is important to tackle these challenges and to obtain high-performance recognition systems when dealing with huge amounts of additional data that become available during the application. Our general approach with image features from deep neural networks and decoupled decision models can be applied to many different mammalian species and is perfectly suited for continuous improvements of the recognition systems via lifelong learning. In our identification experiments, we consider four different taxa, namely two elephant species: African forest elephants and Asian elephants, as well as two species of great apes: gorillas and chimpanzees. Going beyond classical re-identification, our decoupled approach can also be used for predicting attributes of individuals such as gender or age using classification or regression methods. Although applicable for small datasets of individuals as well, we argue that even better recognition performance will be achieved by improving decision models gradually via lifelong learning to exploit huge datasets and continuous recordings from long-term applications. We highlight that algorithms for deploying lifelong learning in real observational studies exist and are ready for use. Hence, lifelong learning might become a valuable concept that supports practitioners when analyzing large-scale image data during long-term monitoring of mammals.

Changes in plant community composition reflect environmental changes like in land-use and climate. While we have the means to record the changes in composition automatically nowadays, we still lack methods to analyze the generated data masses automatically.

Despite many possible applications, machine learning and computer vision approaches are very rarely utilized in biodiversity monitoring. One reason for this might be that automatic image analysis in biodiversity research often poses a unique set of challenges, some of which are not commonly found in many popular datasets. Thus, suitable image datasets are necessary for the development of appropriate algorithms tackling these challenges. In this paper we introduce the ELPephants dataset, a re-identification dataset, which contains 276 elephant individuals in 2078 images following a long-tailed distribution. It offers many different challenges, like fine-grained differences between the individuals, inferring a new view on the elephant from only one training side, aging effects on the animals and large differences in skin color. We also present a baseline approach, which is a system using a YOLO object detector, feature extraction of ImageNet features and discrimination using a support vector machine. This system achieves a top-1 accuracy of 56% and top-10 accuracy of 80% on the ELPephants dataset.