12 results on '"Mengping Cheng"'
Search Results
2. Characterization and expression quantitative trait loci analysis of TaABI4, a pre-harvest sprouting related gene in wheat
- Author
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Jingye Cheng, Maolian Li, Chunsheng Xiao, Jirui Wang, Jian Yang, Wenshuai Chen, Yujiao Liu, Mengping Cheng, Zhi Tan, Calum Watt, and Zhenzhong Wang
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0106 biological sciences ,0301 basic medicine ,Genetics ,Sequence analysis ,Seed dormancy ,food and beverages ,Promoter ,Plant Science ,Biology ,01 natural sciences ,Gene expression profiling ,03 medical and health sciences ,030104 developmental biology ,Inbred strain ,Germination ,Expression quantitative trait loci ,Gene ,010606 plant biology & botany - Abstract
Pre-harvest sprouting (PHS) induced by the absence of seed dormancy causes a severe reduction in crop yield and flour quality. In this study, we isolated and characterized TaABI4, an ABA-responsive transcription factor that participates in regulating seed germination in wheat. Sequence analysis revealed that TaABI4 has three homologues, located on chromosomes 1A/1B/1D. TaABI4 contains a conserved AP2 domain, and AP2-associated, LRP and potential PEST motifs. Putative cis-acting regulatory elements (CE1-like box, W-box, ABRE elements and RY elements) were identified in the TaABI4 promoter region that showed high conservation in 17 wheat cultivars and wheat-related species. Expression profiling of TaABI4 indicated that it is a seed-specific gene accumulating during the middle stages of seed development. Transcript accumulation of TaABI4 in wheat cultivar Chuanmai 32 (CM32, PHS susceptible) was 5.07-fold and 1.39-fold higher than that in synthetic hexaploidy wheat SHW-L1 (PHS resistant) at 15 and 20 DPA, respectively. Six expression quantitative trait loci (eQTL) of TaABI4 on chromosomes 2A, 2D, 3B and 4A were characterized based on the accumulated transcripts of TaABI4 in SHW-L1 and CM32-derived recombinant inbred lines. These QTLs explained 10.7 to 46.1% of the trait variation with 4.53–10.59 of LOD scores, which contain genes that may affect the expression of TaABI4.
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- 2021
- Full Text
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3. Myb10‐D confers PHS‐3D resistance to pre‐harvest sprouting by regulating NCED in ABA biosynthesis pathway of wheat
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Lixuan Gui, Mengping Cheng, You-Liang Zheng, Xiaojiang Guo, Maolian Li, Tingting Zhu, Qiantao Jiang, Chao Tan, Pengfei Qi, Yingjin Yi, Linchuan Li, Yuxin Fu, Yujiao Liu, Ze-Hou Liu, Jirui Wang, Zhien Pu, Zhongxu Chen, Yongrui Wu, Dengcai Liu, Lianquan Zhang, Yuming Wei, Ming Hao, Ming-Cheng Luo, Jian Yang, Guoyue Chen, Jing Lang, Lin Huang, Yong Zhou, Min Deng, and Jian Ma
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Physiology ,Triticum aestivum ,Germination ,Plant Science ,functional analyses ,integrated omics ,Dioxygenases ,Transcriptome ,chemistry.chemical_compound ,Biosynthesis ,Metabolome ,Aegilops tauschii ,Cultivar ,Gene ,Abscisic acid ,Triticum ,Plant Proteins ,synthetic wheat ,biology ,Full Paper ,Research ,pre‐harvest sprouting ,food and beverages ,Full Papers ,biology.organism_classification ,presence–absence variation ,Horticulture ,grain color ,chemistry - Abstract
Summary Pre‐harvest sprouting (PHS), the germination of grain before harvest, is a serious problem resulting in wheat yield and quality losses.Here, we mapped the PHS resistance gene PHS‐3D from synthetic hexaploid wheat to a 2.4 Mb presence–absence variation (PAV) region and found that its resistance effect was attributed to the pleiotropic Myb10‐D by integrated omics and functional analyses.Three haplotypes were detected in this PAV region among 262 worldwide wheat lines and 16 Aegilops tauschii, and the germination percentages of wheat lines containing Myb10‐D was approximately 40% lower than that of the other lines. Transcriptome and metabolome profiling indicated that Myb10‐D affected the transcription of genes in both the flavonoid and abscisic acid (ABA) biosynthesis pathways, which resulted in increases in flavonoids and ABA in transgenic wheat lines. Myb10‐D activates 9‐cis‐epoxycarotenoid dioxygenase (NCED) by biding the secondary wall MYB‐responsive element (SMRE) to promote ABA biosynthesis in early wheat seed development stages.We revealed that the newly discovered function of Myb10‐D confers PHS resistance by enhancing ABA biosynthesis to delay germination in wheat. The PAV harboring Myb10‐D associated with grain color and PHS will be useful for understanding and selecting white grained PHS resistant wheat cultivars.
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- 2021
4. Genome-Wide Association Study of Kernel Black Point Resistance in Chinese Wheat Landraces
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Hao Tang, Zhi Tan, Xiangxiang Wang, Lisheng Yang, Guoyue Chen, Hua Yu, Zhien Pu, Qiantao Jiang, Maolian Li, Mengping Cheng, Pengfei Qi, Wei Li, Yujiao Liu, and Jirui Wang
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Plant Breeding ,Plant Science ,Agronomy and Crop Science ,Triticum ,Disease Resistance ,Genome-Wide Association Study ,Plant Diseases - Abstract
Black point (BP) disease of wheat has become a noticeable problem in China. The symptoms are spots that are brown to black in color around the wheat kernel embryo or in the endosperm, resulting in a significant reduction of wheat grain quality. Here, we evaluated 272 Chinese wheat landraces for BP reaction and performed a genome-wide association study to identify BP resistance quantitative trait loci (QTLs) in five field environments without artificial inoculation. The BP incidence data showed continuous distributions and had low to moderate correlations between environments (r = 0.094 to 0.314). Among the 272 landraces, 11 had 0.1 to 4.9%, 144 had 5 to 14.9%, 100 had 15 to 29.9%, and 17 had >30% incidence. We found three resistant accessions: WH094 (3.33%), AS661463 (2.67%), and AS661231 (2.67%), which can be used in breeding programs to enhance BP resistance. We identified 11 QTLs, which explained 8.22 to 10.99% phenotypic BP variation, and mapped them to eight wheat chromosomes. Three of the QTLs were novel. The molecular markers for the BP resistance could facilitate molecular breeding for developing BP-resistant cultivars.
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- 2021
5. The PGS1 basic helix-loop-helix protein regulates Fl3 to impact seed growth and grain yield in cereals
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Xiaojiang Guo, Yuxin Fu, Yuh‐Ru Julie Lee, Mawsheng Chern, Maolian Li, Mengping Cheng, Huixue Dong, Zhongwei Yuan, Lixuan Gui, Junjie Yin, Hai Qing, Chengbi Zhang, Zhien Pu, Yujiao Liu, Weitao Li, Wei Li, Pengfei Qi, Guoyue Chen, Qiantao Jiang, Jian Ma, Xuewei Chen, Yuming Wei, Youliang Zheng, Yongrui Wu, Bo Liu, and Jirui Wang
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grain size ,and promotion of well-being ,Technology ,grain weight ,Oryza ,Plant ,Plant Science ,Biological Sciences ,Prevention of disease and conditions ,Medical and Health Sciences ,endosperm ,Gene Expression Regulation ,Gene Expression Regulation, Plant ,Seeds ,Basic Helix-Loop-Helix Transcription Factors ,3.3 Nutrition and chemoprevention ,Edible Grain ,Agronomy and Crop Science ,transcription factor ,Triticum ,Biotechnology ,Plant Proteins - Abstract
Plant transcription factors (TFs), such as basic helix-loop-helix (bHLH) and AT-rich zinc-binding proteins (PLATZ), play critical roles in regulating the expression of developmental genes in cereals. We identified the bHLH protein TaPGS1 (T. aestivum Positive Regulator of Grain Size 1) specifically expressed in the seeds at 5-20 days post-anthesis in wheat. TaPGS1 was ectopically overexpressed (OE) in wheat and rice, leading to increased grain weight (up to 13.81% in wheat and 18.55% in rice lines) and grain size. Carbohydrate and total protein levels also increased. Scanning electron microscopy results indicated that the starch granules in the endosperm of TaPGS1 OE wheat and rice lines were smaller and tightly embedded in a proteinaceous matrix. Furthermore, TaPGS1 was bound directly to the E-box motif at the promoter of the PLATZ TF genes TaFl3 and OsFl3 and positively regulated their expression in wheat and rice. In rice, the OsFl3 CRISPR/Cas9 knockout lines showed reduced average thousand-grain weight, grain width, and grain length in rice. Our results reveal that TaPGS1 functions as a valuable trait-associated gene for improving cereal grain yield.
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- 2021
6. Identification and Characterization of PLATZ Transcription Factors in Wheat
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Yuxin Fu, Jirui Wang, Xiaojiang Guo, Mengping Cheng, Maolian Li, and Yongrui Wu
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0106 biological sciences ,0301 basic medicine ,Biology ,01 natural sciences ,Genome ,Catalysis ,Article ,Chromosomes, Plant ,Endosperm ,lcsh:Chemistry ,Inorganic Chemistry ,Transcriptome ,Evolution, Molecular ,03 medical and health sciences ,seed-specific expression ,Gene Expression Regulation, Plant ,wheat ,Gene duplication ,Physical and Theoretical Chemistry ,PLATZ ,lcsh:QH301-705.5 ,Molecular Biology ,Gene ,Transcription factor ,Spectroscopy ,transcription factor ,Phylogeny ,Triticum ,Plant Proteins ,Genetics ,Phylogenetic tree ,Organic Chemistry ,food and beverages ,General Medicine ,Computer Science Applications ,030104 developmental biology ,duplication ,lcsh:Biology (General) ,lcsh:QD1-999 ,Multigene Family ,Function (biology) ,Genome, Plant ,010606 plant biology & botany ,Transcription Factors - Abstract
The PLATZ (plant AT-rich protein and zinc-binding protein) transcription factor family is a class of plant-specific zinc-dependent DNA-binding proteins. PLATZ has essential roles in seed endosperm development, as well as promoting cell proliferation duration in the earlier stages of the crops. In the present study, 62 TaPLATZ genes were identified from the wheat genome, and they were unequally distributed on 15 chromosomes. According to the phylogenetic analysis, 62 TaPLATZ genes were classified into six groups, including two groups that were unique in wheat. Members in the same groups shared similar exon-intron structures. The polyploidization, together with genome duplication of wheat, plays a crucial role in the expansion of the TaPLATZs family. Transcriptome data indicated a distinct divergence expression pattern of TaPLATZ genes that could be clustered into four modules. The TaPLATZs in Module b possessed a seed-specific expression pattern and displayed obvious high expression in the earlier development stage of seeds. Subcellular localization data of TaPLATZs suggesting that they likely perform a function as a conventional transcription factor. This study provides insight into understanding the structure divergence, evolutionary features, expression profiles, and potential function of PLATZ in wheat.
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- 2020
7. Characterization and expression QTL analysis ofTaABI4, a pre-harvest sprouting related gene in wheat
- Author
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Maolian Li, Wenshuai Chen, Chunsheng Xiao, Calum Watt, Jirui Wang, Jingye Cheng, Zhenzhong Wang, Jian Yang, Zhi Tan, Mengping Cheng, and Yujiao Liu
- Subjects
Gene expression profiling ,Genetics ,Inbred strain ,Germination ,Sequence analysis ,Expression quantitative trait loci ,Seed dormancy ,food and beverages ,Promoter ,Biology ,Gene - Abstract
Pre-harvest sprouting (PHS) induced by the decline of seed dormancy causes a severe reduction in crop yield and flour quality. In this study, we isolated and characterizedTaABI4,an ABA-responsive transcription factor that participates in regulating seed germination in wheat. Sequence analysis revealed thatTaABI4has three homologues, located on chromosomes 1A/1B/1D. TaABI4 contains a conserved AP2 domain, and AP2-associated, LRP, and potential PEST motifs. Putativecis-acting regulatory elements (CE1-like box, W-box, ABRE elements, and RY-elements) were identified in theTaABI4promoter region that showed high conservation in 17 wheat cultivars and wheat-related species. Expression profiling ofTaABI4indicated that it is a seed-specific gene accumulating during the middle stages of seed development. Transcript accumulation ofTaABI4in wheat cultivar Chuanmai 32 (CM32, PHS susceptible) was 5.07-fold and 1.39-fold higher than that in synthetic hexaploidy wheat SHW-L1 (PHS resistant) at 15DPA and 20DPA, respectively. Six expression quantitative trait loci (eQTL) ofTaABI4on chromosome 2A, 2D, 3B, and 4A were characterized based on the accumulated transcripts ofTaABI4in SHW-L1 and CM32 derived recombinant inbred lines. These QTLs explained from 10.7% to 46.1% of the trait variation with 4.53~10.59 of LOD scores, which contain genes that may affect the expression ofTaABI4.
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- 2020
- Full Text
- View/download PDF
8. Identification and characterization of rice blast resistance gene Pid4 by a combination of transcriptomic profiling and genome analysis
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Xuewei Chen, Weitao Li, Zhixiong Chen, Lihuang Zhu, Junjie Yin, Xiaobo Zhu, Bingtian Ma, Heng Ying, Wen Zhao, Mengping Cheng, Haicheng Liao, Mawsheng Chern, Chengdong Zou, Jing Wang, Yongzhen Li, Jichun Wang, Jirui Wang, Xiaogang Zhou, Xin Jiang, Min He, and Shigui Li
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0301 basic medicine ,Sequence analysis ,Plant disease resistance ,Biology ,Leucine-Rich Repeat Proteins ,Genome ,03 medical and health sciences ,Gene cluster ,Genetics ,Amino Acid Sequence ,Indel ,Molecular Biology ,Gene ,Peptide sequence ,Disease Resistance ,Plant Diseases ,Plant Proteins ,Base Sequence ,Gene Expression Profiling ,Proteins ,food and beverages ,Oryza ,R gene ,Magnaporthe ,030104 developmental biology ,Multigene Family ,Transcriptome ,Genome, Plant - Abstract
Map-based cloning of plant disease resistance (R) genes is time-consuming. Here, we reported the isolation of blast R gene Pid4 using comparative transcriptomic profiling and genome-wide sequence analysis. Pid4 encodes a coiled-coil nucleotide-binding site leucine-rich repeat (CC-NBS-LRR) protein and is constitutively expressed at diverse developmental stages in the rice variety Digu. The Pid4 protein is localized in both the nucleus and cytoplasm. Introduction of Pid4 into susceptible rice cultivars confers race-specific resistance to leaf and neck blast. Amino acid sequence comparison and blast resistance spectrum tests showed that Pid4 is a novel R gene, different from the previously reported R genes located in the same gene cluster. A Pid4 Indel marker was developed to facilitate the identification of Pid4 in different rice varieties. We demonstrated that a plant R gene can be quickly isolated using transcriptomic profiling coupled with genome-wide sequence analysis.
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- 2018
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9. Research on the full-load joint regulation strategy of coal-fired generating units and electrolyzed hydrogen production
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Ze Wang, Haijie Sun, Fangqin Li, Jianxing Ren, and Mengping Cheng
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History ,Waste management ,Environmental science ,Coal fired ,Joint (geology) ,Computer Science Applications ,Education ,Hydrogen production - Abstract
As the installed capacity of wind power and other renewable energy sources continues to increase, the intermittent and volatility of their output has put tremendous pressure on the safe and stable operation of the power grid. The demand for peak shaving is becoming increasingly urgent. In this paper, the electrolysis hydrogen production system participates in the deep peak shaving of coal-fired generators. Through the participation of load regulation of the electrolysis hydrogen production system, according to the requirements of the power grid on the different loads of the unit, the load of the electrolysis hydrogen production system is adjusted to adjust the load of the unit. In order to realize full-load regulation of coal-fired thermal power plants and improve the power generation efficiency of units.
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- 2021
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10. Uncovering the dispersion history, adaptive evolution and selection of wheat in China
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Yuming Wei, Ming-Cheng Luo, Robin G. Allaby, You-Liang Zheng, Rui Wang, Qiantao Jiang, Eviatar Nevo, Pengfei Qi, Jan Dvorak, Yaxi Liu, Tingting Zhu, Yong Zhou, Jian Chen, Zhongxu Chen, Mengping Cheng, Jirui Wang, Guoyue Chen, and Dengcai Liu
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0106 biological sciences ,0301 basic medicine ,China ,Population structure ,selection ,Plant Science ,Biology ,Deserts and xeric shrublands ,01 natural sciences ,Genome ,Divergence ,03 medical and health sciences ,Gene Frequency ,wheat ,landrace ,SB ,Allele frequency ,Research Articles ,Triticum ,Selection (genetic algorithm) ,business.industry ,Ecology ,Genetic Variation ,food and beverages ,030104 developmental biology ,Agriculture ,adaption ,dispersion ,business ,Agronomy and Crop Science ,Genome, Plant ,Research Article ,010606 plant biology & botany ,Biotechnology - Abstract
Summary Wheat was introduced to China approximately 4500 years ago, where it adapted over a span of time to various environments in agro‐ecological growing zones. We investigated 717 Chinese and 14 Iranian/Turkish geographically diverse, locally adapted wheat landraces with 27 933 DArTseq (for 717 landraces) and 312 831 Wheat660K (for a subset of 285 landraces) markers. This study highlights the adaptive evolutionary history of wheat cultivation in China. Environmental stresses and independent selection efforts have resulted in considerable genome‐wide divergence at the population level in Chinese wheat landraces. In total, 148 regions of the wheat genome show signs of selection in at least one geographic area. Our data show adaptive events across geographic areas, from the xeric northwest to the mesic south, along and among homoeologous chromosomes, with fewer variations in the D genome than in the A and B genomes. Multiple variations in interdependent functional genes such as regulatory and metabolic genes controlling germination and flowering time were characterized, showing clear allelic frequency changes corresponding to the dispersion of wheat in China. Population structure and selection data reveal that Chinese wheat spread from the northwestern Caspian Sea region to South China, adapting during its agricultural trajectory to increasingly mesic and warm climatic areas.
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- 2017
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11. Identification of qPHS.sicau-1B and qPHS.sicau-3D from synthetic wheat for pre-harvest sprouting resistance wheat improvement
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Yong Zhou, Yun Zhou, Mengping Cheng, Maolian Li, Zehou Liu, Lianquan Zhang, Min Hao, Jian Yang, Hao Tang, Chao Tan, Jing Lang, Jirui Wang, Hua Yu, Dengcai Liu, and Zhi Tan
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0106 biological sciences ,0301 basic medicine ,biology ,food and beverages ,Plant Science ,Quantitative trait locus ,biology.organism_classification ,01 natural sciences ,03 medical and health sciences ,Horticulture ,030104 developmental biology ,Inbred strain ,Germination ,Genetics ,Aegilops tauschii ,Cultivar ,Common wheat ,Allele ,Agronomy and Crop Science ,Molecular Biology ,010606 plant biology & botany ,Biotechnology ,Sprouting - Abstract
Pre-harvest sprouting (PHS) causes serious damage that leads to deterioration in overall quality and decreased yield and reduction of grain yield in cereal. In this study, two major quantitative trait loci (QTLs), qPHS.sicau-3D and qPHS.sicau-1B, were detected in synthetic wheat (SHW-L1) and were derived from Aegilops tauschii AS60 (deep dormant) and Triticum turgidum AS2255 (medium PHS-resistant). qPHS.sicau-1B is located in the region near the telomere of 1BS, and qPHS.sicau-3D is located on the end of 3DL; these QTLs explain approximately 20.99% and 42.47% of the phenotypic variation. Pyramiding of both QTLs showed superior PHS resistance in recombinant inbred lines (RILs). The array-based SNP markers AX-94924265 for qPHS.sicau-1B and AX-94415259 for qPHS.sicau-3D were successfully converted to Kompetitive Allele Specific Polymerase Chain Reaction (KASP) and STS markers. L10-1580 is a light red breeding materials selected from SHW-L1-derived breeding lines that harbors the PHS-tolerant elite alleles which showed similar germination level with SHW-L1 and better resistance than other common wheat parents. L10-1580 harbors the elite alleles AX-94924265_GG/AX-94415259_B which showed similar PHS resistance as SHW-L1 and better resistance than other common wheat parents. Therefore, these QTLs for PHS resistance obtained from synthetic wheat could combine or coexist with other elite agronomic traits in high-yield wheat cultivars.
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- 2019
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12. A Natural Allele of a Transcription Factor in Rice Confers Broad-Spectrum Blast Resistance
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Xuewei Chen, Jing Wang, Yuping Wang, Zhixiong Chen, Jichun Wang, Peng Qin, Min He, Weilan Chen, Mengping Cheng, Lihuang Zhu, Junjie Yin, Ping Li, Jiali Liu, Wen Zhao, Shigui Li, Mawsheng Chern, Li Ran, Xianjun Wu, Chao Yang, Xiaogang Zhou, Ziwei Zhu, Kang Wang, Xiaobo Zhu, Bingtian Ma, Jirui Wang, Wenming Wang, and Weitao Li
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0106 biological sciences ,0301 basic medicine ,Population ,Breeding ,Plant disease resistance ,Biology ,01 natural sciences ,Genome ,General Biochemistry, Genetics and Molecular Biology ,Crop ,Gene Knockout Techniques ,03 medical and health sciences ,MYB ,Allele ,Promoter Regions, Genetic ,education ,Transcription factor ,Gene ,Disease Resistance ,Plant Diseases ,Plant Proteins ,Genetics ,education.field_of_study ,Base Sequence ,food and beverages ,Oryza ,030104 developmental biology ,Genome, Plant ,Genome-Wide Association Study ,Transcription Factors ,010606 plant biology & botany - Abstract
Summary Rice feeds half the world's population, and rice blast is often a destructive disease that results in significant crop loss. Non-race-specific resistance has been more effective in controlling crop diseases than race-specific resistance because of its broad spectrum and durability. Through a genome-wide association study, we report the identification of a natural allele of a C 2 H 2 -type transcription factor in rice that confers non-race-specific resistance to blast. A survey of 3,000 sequenced rice genomes reveals that this allele exists in 10% of rice, suggesting that this favorable trait has been selected through breeding. This allele causes a single nucleotide change in the promoter of the bsr-d1 gene, which results in reduced expression of the gene through the binding of the repressive MYB transcription factor and, consequently, an inhibition of H 2 O 2 degradation and enhanced disease resistance. Our discovery highlights this novel allele as a strategy for breeding durable resistance in rice.
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- 2017
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