37 results on '"Satomi Kanno"'
Search Results
2. Mice Lacking Cerebellar Cortex and Related Structures Show a Decrease in Slow-Wave Activity With Normal Non-REM Sleep Amount and Sleep Homeostasis
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Tomoyuki Fujiyama, Henri Takenaka, Fuyuki Asano, Kazuya Miyanishi, Noriko Hotta-Hirashima, Yukiko Ishikawa, Satomi Kanno, Patricia Seoane-Collazo, Hideki Miwa, Mikio Hoshino, Masashi Yanagisawa, and Hiromasa Funato
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Behavioral Neuroscience ,Neuropsychology and Physiological Psychology ,Cognitive Neuroscience - Abstract
In addition to the well-known motor control, the cerebellum has recently been implicated in memory, cognition, addiction, and social behavior. Given that the cerebellum contains more neurons than the cerebral cortex and has tight connections to the thalamus and brainstem nuclei, it is possible that the cerebellum also regulates sleep/wakefulness. However, the role of the cerebellum in sleep was unclear, since cerebellar lesion studies inevitably involved massive inflammation in the adjacent brainstem, and sleep changes in lesion studies were not consistent with each other. Here, we examine the role of the cerebellum in sleep and wakefulness using mesencephalon- and rhombomere 1-specific Ptf1a conditional knockout (Ptf1a cKO) mice, which lack the cerebellar cortex and its related structures, and exhibit ataxic gait. Ptf1a cKO mice had similar wake and non-rapid eye movement sleep (NREMS) time as control mice and showed reduced slow wave activity during wakefulness, NREMS and REMS. Ptf1a cKO mice showed a decrease in REMS time during the light phase and had increased NREMS delta power in response to 6 h of sleep deprivation, as did control mice. Ptf1a cKO mice also had similar numbers of sleep spindles and fear memories as control mice. Thus, the cerebellum does not appear to play a major role in sleep-wake control, but may be involved in the generation of slow waves.
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- 2022
3. Visualization of phosphorus re-translocation and phosphate transporter expression profiles in a shortened annual cycle system of poplar
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Yuko Kurita, Satomi Kanno, Ryohei Sugita, Atsushi Hirose, Miwa Ohnishi, Ayumi Tezuka, Ayumi Deguchi, Kimitsune Ishizaki, Hidehiro Fukaki, Kei'ichi Baba, Atsushi J. Nagano, Keitaro Tanoi, Tomoko M. Nakanishi, and Tetsuro Mimura
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Plant Leaves ,Populus ,Physiology ,Xylem ,Phosphate Transport Proteins ,Phosphorus ,Plant Science ,Phloem ,Trees - Abstract
Phosphorus (P) is an essential macronutrient for plant growth. In deciduous trees, P is remobilized from senescing leaves and stored in perennial tissues during winter for further growth. Annual internal recycling and accumulation of P are considered an important strategy to support the vigorous growth of trees. However, the pathways of seasonal re-translocation of P and the molecular mechanisms of this transport have not been clarified. Here we show the seasonal P re-translocation route visualized using real-time radioisotope imaging and the macro- and micro-autoradiography. We analysed the seasonal re-translocation P in poplar (Populus alba. L) cultivated under 'a shortened annual cycle system', which mimicked seasonal phenology in a laboratory. From growing to senescing season, sink tissues of
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- 2022
4. Disruption of AtHAK / KT / KUP9 enhances plant cesium accumulation under low potassium supply
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Ludovic Martin, Satomi Kanno, Nathalie Leonhardt, Loic Carasco, Virginie Camilleri, Serge Chiarenza, Pascale Henner, Laure Genies, Alain Vavasseur, Signalisation de l'Adaptation des Végétaux à l'Environnement (SAVE), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'études et de modélisations des systèmes (LEMS), CEA Cadarache, Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), IRSN/PSE-ENV/SRTE/LR2T, Institut de Radioprotection et de Sûreté Nucléaire (IRSN), DRF/BIAM/SAVE, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Commissariat à l'Energie Atomique et aux énergies alternatives (CEA), PSE-ENV/SRTE/LR2T, PSE-ENV/SRTE/LECO, UMR 7265 CNRS/ CEA/ Aix-Marseille UniversitéBiosciences and Biotechnologies Institute (BIAM) (CEA-BIAM), Laboratoire de recherche sur les transferts des radionucléides dans les écosystèmes terrestres (IRSN/PSE-ENV/SRTE/LR2T), Service de recherche sur les transferts et les effets des radionucléides sur les écosystèmes (IRSN/PSE-ENV/SRTE), Institut de Radioprotection et de Sûreté Nucléaire (IRSN)-Institut de Radioprotection et de Sûreté Nucléaire (IRSN), Plant Environmental Physiology and Stress Signaling (PEPSS), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), and Laboratoire d'écotoxicologie des radionucléides (IRSN/PSE-ENV/SRTE/LECO)
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0106 biological sciences ,Physiology ,Potassium ,[SDV]Life Sciences [q-bio] ,Mutant ,Arabidopsis ,Cesium ,chemistry.chemical_element ,Plant Science ,01 natural sciences ,03 medical and health sciences ,Gene Expression Regulation, Plant ,Genetics ,Arabidopsis thaliana ,ComputingMilieux_MISCELLANEOUS ,Plant Proteins ,030304 developmental biology ,0303 health sciences ,biology ,Chemistry ,Biological Transport ,Transporter ,Cell Biology ,General Medicine ,biology.organism_classification ,Caesium ,[SDE]Environmental Sciences ,Biophysics ,Efflux ,010606 plant biology & botany - Abstract
Understanding molecular mechanisms which underlie transport of cesium (Cs+) in plants is important to limit entry of its radioisotopes from contaminated area to the food chain. The potentially toxic element Cs+, which is not involved in any biological process, is chemically closed to the macronutrient potassium (K+). Among the multiple K+ carriers, the high-affinity K+ transporters family HAK/KT/KUP is thought to be relevant in mediating opportunistic Cs+ transport. On the 13 KUP identified in Arabidopsis thaliana, only HAK5, the major contributor to root K+ acquisition under low K+ supply, has been functionally demonstrated to be involved in Cs+ uptake in planta. In the present study, we showed that accumulation of Cs+ increased by up to 30% in two A. thaliana mutant lines lacking KUP9 and grown under low K+ supply. Since further experiments revealed that Cs+ release from contaminated plants to the external medium is proportionally lower in the two kup9 mutants, we proposed that KUP9 disruption could impair Cs+ efflux. By contrast, we did not measure significant impairment of K+ status in kup9 mutants suggesting that KUP9 disruption does not alter substantially K+ transport in experimental conditions used here. Putative primary role of KUP9 in plants is further discussed.
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- 2021
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5. Kinase signalling in excitatory neurons regulates sleep quantity and depth
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Staci J. Kim, Noriko Hotta-Hirashima, Fuyuki Asano, Tomohiro Kitazono, Kanako Iwasaki, Shinya Nakata, Haruna Komiya, Nodoka Asama, Taeko Matsuoka, Tomoyuki Fujiyama, Aya Ikkyu, Miyo Kakizaki, Satomi Kanno, Jinhwan Choi, Deependra Kumar, Takumi Tsukamoto, Asmaa Elhosainy, Seiya Mizuno, Shinichi Miyazaki, Yousuke Tsuneoka, Fumihiro Sugiyama, Satoru Takahashi, Yu Hayashi, Masafumi Muratani, Qinghua Liu, Chika Miyoshi, Masashi Yanagisawa, and Hiromasa Funato
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Multidisciplinary - Abstract
Progress has been made in the elucidation of sleep and wakefulness regulation at the neurocircuit level
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- 2021
6. Gut microbiota depletion by chronic antibiotic treatment alters the sleep/wake architecture and sleep EEG power spectra in mice
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Shinji Fukuda, Kaho Yajima, Noriko Hotta-Hirashima, Tomoyoshi Soga, Satomi Kanno, Masashi Yanagisawa, Aya Ikkyu, Yukino Ogawa, Nozomu Obana, and Chika Miyoshi
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Male ,medicine.medical_specialty ,medicine.drug_class ,Antibiotics ,Rapid eye movement sleep ,Sleep, REM ,lcsh:Medicine ,Gut flora ,Neurotransmission ,Synaptic Transmission ,digestive system ,Article ,Internal medicine ,medicine ,Metabolome ,Metabolomics ,Animals ,Wakefulness ,lcsh:Science ,Cecum ,Neurotransmitter Agents ,Multidisciplinary ,biology ,musculoskeletal, neural, and ocular physiology ,lcsh:R ,Electroencephalography ,Metabolism ,biology.organism_classification ,medicine.disease ,Anti-Bacterial Agents ,Gastrointestinal Microbiome ,Mice, Inbred C57BL ,Endocrinology ,lcsh:Q ,Microbiome ,Serotonin ,Sleep ,Dysbiosis ,psychological phenomena and processes - Abstract
Dysbiosis of the gut microbiota affects physiological processes, including brain functions, by altering the intestinal metabolism. Here we examined the effects of the gut microbiota on sleep/wake regulation. C57BL/6 male mice were treated with broad-spectrum antibiotics for 4 weeks to deplete their gut microbiota. Metabolome profiling of cecal contents in antibiotic-induced microbiota-depleted (AIMD) and control mice showed significant variations in the metabolism of amino acids and vitamins related to neurotransmission, including depletion of serotonin and vitamin B6, in the AIMD mice. Sleep analysis based on electroencephalogram and electromyogram recordings revealed that AIMD mice spent significantly less time in non-rapid eye movement sleep (NREMS) during the light phase while spending more time in NREMS and rapid eye movement sleep (REMS) during the dark phase. The number of REMS episodes seen in AIMD mice increased during both light and dark phases, and this was accompanied by frequent transitions from NREMS to REMS. In addition, the theta power density during REMS was lower in AIMD mice during the light phase compared with that in the controls. Consequently, the gut microbiota is suggested to affect the sleep/wake architecture by altering the intestinal balance of neurotransmitters.
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- 2020
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7. Visualization of seasonal phosphorus re-translocation, and expression profile of phosphate transporters in a shortened annual cycle system of the deciduous poplar tree
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Miwa Ohnishi, Atsushi J. Nagano, Tomoko M. Nakanishi, Kimitsune Ishizaki, Tetsuro Mimura, Satomi Kanno, Ayumi Deguchi, Kei'ichi Baba, Ayumi Tezuka, Ryohei Sugita, Yuko Kurita, Hidehiro Fukaki, Keitaro Tanoi, and Atsushi Hirose
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Deciduous ,chemistry ,Perennial plant ,Phenology ,Phosphorus ,Shoot ,Botany ,Xylem ,chemistry.chemical_element ,Dormancy ,Phloem ,Biology - Abstract
Phosphorus (P) is an essential macronutrient for plant growth. In deciduous trees, P is remobilized from senescing leaves and stored in perennial tissues during winter for further growth. Annual internal recycling and accumulation of P is considered an important strategy to support vigorous growth of trees. However, the pathways of seasonal re-translocation of P and the molecular mechanisms of this transport have not been clarified. Here we show the seasonal P re-translocation route visualized using the real-time radioisotope imaging and the macro- and micro-autoradiography. We analyzed the seasonal re-translocation P in poplar (Populus alba. L) cultivated under “a shortened annual cycle system”, which mimicked seasonal phenology in a laboratory. From growing to senescing season, sink tissues of 32P and/or 33P shifted from young leaves and the apex to the lower stem and roots. The radioisotope P re-translocated from a leaf was stored in phloem and xylem parenchyma cells and redistributed to new shoots after dormancy. Seasonal expression profile of phosphate transporters (PHT1, PHT5 and PHO1 family) was obtained in the same system. Our results reveal the seasonal P re-translocation routes at the organ and tissue levels and provide a foothold for elucidating its molecular mechanisms.
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- 2020
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8. Sulfur Deficiency Increases Phosphate Accumulation, Uptake, and Transport in
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Alaa, Allahham, Satomi, Kanno, Liu, Zhang, and Akiko, Maruyama-Nakashita
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Arabidopsis thaliana ,Arabidopsis Proteins ,fungi ,Arabidopsis ,food and beverages ,phosphate accumulation ,Biological Transport ,Plants, Genetically Modified ,Plant Roots ,Article ,Phosphates ,DNA-Binding Proteins ,Gene Expression Regulation, Plant ,sulfur ,Phosphate Transport Proteins ,phosphate transporters ,phosphorus ,Plant Shoots ,Signal Transduction ,Transcription Factors - Abstract
Recent studies have shown various metabolic and transcriptomic interactions between sulfur (S) and phosphorus (P) in plants. However, most studies have focused on the effects of phosphate (Pi) availability and P signaling pathways on S homeostasis, whereas the effects of S availability on P homeostasis remain largely unknown. In this study, we investigated the interactions between S and P from the perspective of S availability. We investigated the effects of S availability on Pi uptake, transport, and accumulation in Arabidopsis thaliana grown under sulfur sufficiency (+S) and deficiency (−S). Total P in shoots was significantly increased under −S owing to higher Pi accumulation. This accumulation was facilitated by increased Pi uptake under −S. In addition, −S increased root-to-shoot Pi transport, which was indicated by the increased Pi levels in xylem sap under −S. The −S-increased Pi level in the xylem sap was diminished in the disruption lines of PHT1;9 and PHO1, which are involved in root-to-shoot Pi transport. Our findings indicate a new aspect of the interaction between S and P by listing the increased Pi accumulation as part of −S responses and by highlighting the effects of −S on Pi uptake, transport, and homeostasis.
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- 2020
9. A phytochrome-B-mediated regulatory mechanism of phosphorus acquisition
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Keina Monda, Satomi Kanno, Koh Iba, Atsushi Mabuchi, Shuichi Yanagisawa, and Yasuhito Sakuraba
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0106 biological sciences ,0301 basic medicine ,Light ,Arabidopsis ,chemistry.chemical_element ,Plant Science ,Biology ,01 natural sciences ,Phosphates ,03 medical and health sciences ,chemistry.chemical_compound ,Nutrient ,Gene Expression Regulation, Plant ,Phytochrome B ,Basic Helix-Loop-Helix Transcription Factors ,Gene ,Phytochrome ,Arabidopsis Proteins ,Phosphorus ,Nuclear Proteins ,Phosphate ,biology.organism_classification ,Light intensity ,Basic-Leucine Zipper Transcription Factors ,030104 developmental biology ,chemistry ,Biochemistry ,Seedlings ,Mutation ,Shoot ,Signal Transduction ,010606 plant biology & botany - Abstract
Phosphorus (P) is a key macronutrient whose availability has a profound effect on plant growth and productivity. The understanding of the mechanism underlying P availability-responsive P acquisition has expanded largely in the past decade; however, effects of other environmental factors on P acquisition and utilization remain elusive. Here, by imaging natural variation in phosphate uptake in 200 natural accessions of Arabidopsis, we identify two accessions with low phosphate uptake activity, Lm-2 and CSHL-5. In these accessions, natural variants of phytochrome B were found to cause both decreased light sensitivity and lower phosphate uptake. Furthermore, we also found that expression levels of phosphate starvation-responsive genes are directly modulated by phytochrome interacting factors (PIF) PIF4/PIF5 and HY5 transcription factors whose activity is under the control of phytochromes. These findings disclose a new molecular mechanism underlying red-light-induced activation of phosphate uptake, which is responsible for different activity for P acquisition in some natural accessions of Arabidopsis. Plants develop shoots and roots to access light, carbon dioxide, water and nutrients. Light intensity and quality are suggested to affect root nutrient uptake. Now, the researchers identify a mechanistic link between red light and phosphorus uptake by investigating 200 natural accessions of Arabidopsis.
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- 2018
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10. Forebrain Ptf1a Is Required for Sexual Differentiation of the Brain
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Akira Shibuya, Satomi Kanno, Masafumi Muratani, Mikio Hoshino, Yukiko Ishikawa, Yoshiya Kawaguchi, Yousuke Tsuneoka, Masashi Yanagisawa, Mariko Yamashita, Hiromasa Funato, Mark A. Magnuson, Tomoo Owa, Yuchio Yanagawa, Yo-ichi Nabeshima, Tomoyuki Fujiyama, Miyo Kakizaki, Kazumasa Kanemaru, Mai Nagaoka, and Satoshi Miyashita
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Male ,0301 basic medicine ,endocrine system ,medicine.medical_specialty ,Sex Differentiation ,Period (gene) ,sexual differentiation ,Biology ,General Biochemistry, Genetics and Molecular Biology ,kisspeptin ,Sexual Behavior, Animal ,03 medical and health sciences ,Prosencephalon ,sexual behavior ,0302 clinical medicine ,Internal medicine ,medicine ,Animals ,Cell Lineage ,hypothalamus ,Gonads ,lcsh:QH301-705.5 ,Mice, Knockout ,Ptf1a ,Third ventricle ,Sexual differentiation ,Gene Expression Regulation, Developmental ,Embryo, Mammalian ,central nervous system ,Phenotype ,Mice, Inbred C57BL ,Neuroepithelial cell ,030104 developmental biology ,medicine.anatomical_structure ,Endocrinology ,nervous system ,lcsh:Biology (General) ,Hypothalamus ,Forebrain ,Female ,Abnormality ,030217 neurology & neurosurgery ,Transcription Factors - Abstract
Summary: The mammalian brain undergoes sexual differentiation by gonadal hormones during the perinatal critical period. However, the machinery at earlier stages has not been well studied. We found that Ptf1a is expressed in certain neuroepithelial cells and immature neurons around the third ventricle that give rise to various neurons in several hypothalamic nuclei. We show that conditional Ptf1a-deficient mice (Ptf1a cKO) exhibit abnormalities in sex-biased behaviors and reproductive organs in both sexes. Gonadal hormone administration to gonadectomized animals revealed that the abnormal behavior is caused by disorganized sexual development of the knockout brain. Accordingly, expression of sex-biased genes was severely altered in the cKO hypothalamus. In particular, Kiss1, important for sexual differentiation of the brain, was drastically reduced in the cKO hypothalamus, which may contribute to the observed phenotypes in the Ptf1a cKO. These findings suggest that forebrain Ptf1a is one of the earliest regulators for sexual differentiation of the brain. : Fujiyama et al. find that forebrain-specific Ptf1a-deficient mice (Ptf1a cKO) exhibit abnormalities in sexually dimorphic behaviors, reproductive organs, and severely altered expression of sex-biased genes, including Kiss1, in the hypothalamus in both sexes, which suggests that forebrain Ptf1a is one of the earliest regulators for sexual differentiation of the brain. Keywords: sexual differentiation, sexual behavior, hypothalamus, Ptf1a, kisspeptin, central nervous system
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- 2018
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11. Quantitative phosphoproteomic analysis of the molecular substrates of sleep need
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Junmin Peng, Makito Sato, Chi-Yu Lee, Xiaojie Yang, Miyo Kakizaki, Tingting Lou, Noriko Hotta-Hirashima, Qinghua Liu, Yonghao Yu, Zhiqiang Wang, Masashi Yanagisawa, Satoru Takahashi, Aya Ikkyu, Hiromasa Funato, Shuang Zhou, Tomoyuki Fujiyama, Yuxin Li, Satomi Kanno, Yukino Ogawa, Liqin Cao, Chengyuan Ma, Jing Ma, Chika Miyoshi, Xue Gao, and Daniela Klewe-Nebenius
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Male ,Proteomics ,0301 basic medicine ,Proteome ,Hyperphosphorylation ,Protein Serine-Threonine Kinases ,Biology ,Article ,Mice ,03 medical and health sciences ,medicine ,Animals ,Homeostasis ,Phosphorylation ,Wakefulness ,Memory Consolidation ,Slow-wave sleep ,Multidisciplinary ,Brain ,Phosphoproteins ,Sleep in non-human animals ,Mice, Inbred C57BL ,Sleep deprivation ,030104 developmental biology ,Gain of Function Mutation ,Synapses ,Sleep Deprivation ,Memory consolidation ,medicine.symptom ,Sleep ,Neuroscience - Abstract
Sleep and wake have global effects on brain physiology, from molecular changes1–4 and neuronal activities to synaptic plasticity3–7. Sleep–wake homeostasis is maintained by the generation of a sleep need that accumulates during waking and dissipates during sleep8–11. Here we investigate the molecular basis of sleep need using quantitative phosphoproteomic analysis of the sleep-deprived and Sleepy mouse models of increased sleep need. Sleep deprivation induces cumulative phosphorylation of the brain proteome, which dissipates during sleep. Sleepy mice, owing to a gain-of-function mutation in the Sik3 gene 12 , have a constitutively high sleep need despite increased sleep amount. The brain proteome of these mice exhibits hyperphosphorylation, similar to that seen in the brain of sleep-deprived mice. Comparison of the two models identifies 80 mostly synaptic sleep-need-index phosphoproteins (SNIPPs), in which phosphorylation states closely parallel changes of sleep need. SLEEPY, the mutant SIK3 protein, preferentially associates with and phosphorylates SNIPPs. Inhibition of SIK3 activity reduces phosphorylation of SNIPPs and slow wave activity during non-rapid-eye-movement sleep, the best known measurable index of sleep need, in both Sleepy mice and sleep-deprived wild-type mice. Our results suggest that phosphorylation of SNIPPs accumulates and dissipates in relation to sleep need, and therefore SNIPP phosphorylation is a molecular signature of sleep need. Whereas waking encodes memories by potentiating synapses, sleep consolidates memories and restores synaptic homeostasis by globally downscaling excitatory synapses4–6. Thus, the phosphorylation–dephosphorylation cycle of SNIPPs may represent a major regulatory mechanism that underlies both synaptic homeostasis and sleep–wake homeostasis.
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- 2018
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12. Molecular mechanisms of REM sleep regulation: identifying protein-protein interactions of NALCN channel through BioID technique
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Tomoyuki Fujiyama, Hikari Yamamoto, Tomohiro Kitazono, Aya Ikkyu, Satomi Kanno, Miyo Kakizaki, Jinhwan Choi, Shinya Nakata, Kazuya Murata, Seiya Mizuno, Fumihiro Sugiyama, Satoru Takahashi, Hiromasa Funato, and Masashi Yanagisawa
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Applied Mathematics ,General Mathematics - Published
- 2022
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13. Methodology and theoretical basis of forward genetic screening for sleep/wakefulness in mice
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Takahiro Ezaki, Satomi Kanno, Shigeharu Wakana, Mana Yamada, Noriko Hotta-Hirashima, Masashi Yanagisawa, Aya Ikkyu, Hiromasa Funato, Staci Jakyong Kim, Chika Miyoshi, and Miyo Kakizaki
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Male ,media_common.quotation_subject ,Rapid eye movement sleep ,Disorders of Excessive Somnolence ,Gene mutation ,Electroencephalography ,Biology ,Quantitative trait locus ,Calcium Channels, N-Type ,medicine ,Animals ,Computer Simulation ,Genetic Testing ,Wakefulness ,Crosses, Genetic ,media_common ,Genes, Dominant ,Multidisciplinary ,medicine.diagnostic_test ,Homozygote ,Reproducibility of Results ,Biological Sciences ,Forward genetics ,Pedigree ,Mice, Inbred C57BL ,Phenotype ,Ethylnitrosourea ,Mutation ,Female ,Abnormality ,Lod Score ,Sleep ,Neuroscience ,psychological phenomena and processes ,Vigilance (psychology) - Abstract
The regulatory network of genes and molecules in sleep/wakefulness remains to be elucidated. Here we describe the methodology and workflow of the dominant screening of randomly mutagenized mice and discuss theoretical basis of forward genetics research for sleep in mice. Our high-throughput screening employs electroencephalogram (EEG) and electromyogram (EMG) to stage vigilance states into a wake, rapid eye movement sleep (REMS) and non-REM sleep (NREMS). Based on their near-identical sleep/wake behavior, C57BL/6J (B6J) and C57BL/6N (B6N) are chosen as mutagenized and counter strains, respectively. The total time spent in the wake and NREMS, as well as the REMS episode duration, shows sufficient reproducibility with small coefficients of variance, indicating that these parameters are most suitable for quantitative phenotype-driven screening. Coarse linkage analysis of the quantitative trait, combined with whole-exome sequencing, can identify the gene mutation associated with sleep abnormality. Our simulations calculate the achievable LOD score as a function of the phenotype strength and the numbers of mice examined. A pedigree showing a mild decrease in total wake time resulting from a heterozygous point mutation in the Cacna1a gene is described as an example.
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- 2019
14. Sulfur Deficiency Increases Phosphate Accumulation, Uptake, and Transport in Arabidopsis thaliana
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Liu Zhang, Akiko Maruyama-Nakashita, Satomi Kanno, and Alaa Allahham
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0106 biological sciences ,0301 basic medicine ,Arabidopsis thaliana ,phosphate accumulation ,chemistry.chemical_element ,01 natural sciences ,Catalysis ,lcsh:Chemistry ,Inorganic Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Pi ,phosphorus ,Physical and Theoretical Chemistry ,lcsh:QH301-705.5 ,Molecular Biology ,Spectroscopy ,biology ,Chemistry ,Phosphorus ,fungi ,Organic Chemistry ,food and beverages ,Xylem ,General Medicine ,biology.organism_classification ,Phosphate ,Computer Science Applications ,Cell biology ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,sulfur ,Shoot ,phosphate transporters ,Signal transduction ,Homeostasis ,010606 plant biology & botany - Abstract
Recent studies have shown various metabolic and transcriptomic interactions between sulfur (S) and phosphorus (P) in plants. However, most studies have focused on the effects of phosphate (Pi) availability and P signaling pathways on S homeostasis, whereas the effects of S availability on P homeostasis remain largely unknown. In this study, we investigated the interactions between S and P from the perspective of S availability. We investigated the effects of S availability on Pi uptake, transport, and accumulation in Arabidopsis thaliana grown under sulfur sufficiency (+S) and deficiency (&minus, S). Total P in shoots was significantly increased under &minus, S owing to higher Pi accumulation. This accumulation was facilitated by increased Pi uptake under &minus, S. In addition, &minus, S increased root-to-shoot Pi transport, which was indicated by the increased Pi levels in xylem sap under &minus, S. The &minus, S-increased Pi level in the xylem sap was diminished in the disruption lines of PHT1, 9 and PHO1, which are involved in root-to-shoot Pi transport. Our findings indicate a new aspect of the interaction between S and P by listing the increased Pi accumulation as part of &minus, S responses and by highlighting the effects of &minus, S on Pi uptake, transport, and homeostasis.
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- 2020
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15. A single phosphorylation site of SIK3 regulates daily sleep amounts and sleep need in mice
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Fumihiro Sugiyama, Aya Ikkyu, Satoru Takahashi, Satomi Kanno, Chika Miyoshi, Noriko Hotta-Hirashima, Hiromasa Funato, Masashiyanagisawa Yanagisawa, Takato Honda, Tomoyuki Fujiyama, and Seiya Mizuno
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0301 basic medicine ,Male ,Mutant ,Biology ,Protein Serine-Threonine Kinases ,medicine.disease_cause ,03 medical and health sciences ,Exon ,Mice ,Sleep debt ,medicine ,Animals ,Homeostasis ,Phosphorylation ,Wakefulness ,Protein kinase A ,Neurons ,Mutation ,Multidisciplinary ,Biological Sciences ,Sleep in non-human animals ,Cell biology ,Mice, Inbred C57BL ,030104 developmental biology ,Sleep ,Genetic screen - Abstract
Sleep is an evolutionally conserved behavior from vertebrates to invertebrates. The molecular mechanisms that determine daily sleep amounts and the neuronal substrates for homeostatic sleep need remain unknown. Through a large-scale forward genetic screen of sleep behaviors in mice, we previously demonstrated that the Sleepy mutant allele of the Sik3 protein kinase gene markedly increases daily nonrapid-eye movement sleep (NREMS) amounts and sleep need. The Sleepy mutation deletes the in-frame exon 13 encoding a peptide stretch encompassing S551, a known PKA recognition site in SIK3. Here, we demonstrate that single amino acid changes at SIK3 S551 (S551A and S551D) reproduce the hypersomnia phenotype of the Sleepy mutant mice. These mice exhibit increased NREMS amounts and inherently increased sleep need, the latter demonstrated by increased duration of individual NREMS episodes and higher EEG slow-wave activity during NREMS. At the molecular level, deletion or mutation at SIK3 S551 reduces PKA recognition and abolishes 14-3-3 binding. Our results suggest that the evolutionally conserved S551 of SIK3 mediates, together with PKA and 14-3-3, the intracellular signaling crucial for the regulation of daily sleep amounts and sleep need at the organismal level.
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- 2018
16. Sleep/Wake Behaviors in Mice During Pregnancy and Pregnancy-Associated Hypertensive Mice
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Hiromi Hamada, Satomi Kanno, Akiyoshi Fukamizu, Masashi Yanagisawa, Aya Ikkyu, Takato Honda, Chika Miyoshi, Hiromasa Funato, Noriko Hotta-Hirashima, Toyomi Satoh, Kanako Iwasaki, Masahiko Gosho, and Haruna Komiya
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0301 basic medicine ,medicine.medical_specialty ,Non-rapid eye movement sleep ,Preeclampsia ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Pregnancy ,Physiology (medical) ,Internal medicine ,Medicine ,Animals ,Wakefulness ,Antihypertensive Agents ,Evans Blue ,Eclampsia ,business.industry ,Electromyography ,Brain ,Electroencephalography ,Hypertension, Pregnancy-Induced ,medicine.disease ,Sleep in non-human animals ,Mice, Inbred C57BL ,030104 developmental biology ,Endocrinology ,Blood pressure ,chemistry ,Female ,Neurology (clinical) ,business ,Sleep ,psychological phenomena and processes ,030217 neurology & neurosurgery - Abstract
Study objectives In humans and other mammals, sleep is altered during pregnancy. However, no studies have been conducted on sleep/wakefulness during pregnancy in mice. In this study, we examined sleep/wakefulness in female C57BL/6 mice during pregnancy. We also examined sleep/wake behaviors in an animal model of preeclampsia, pregnancy-associated hypertensive (PAH) mice, in which increased angiotensin causes hypertension. Methods Sleep/wake behaviors of female C57BL/6 and PAH mice were examined based on electroencephalogram (EEG) or electromyogram recordings before, during, and after pregnancy. To examine whether high blood pressure disrupts the integrity of the blood-brain barrier in PAH mice, Evans blue dye was injected intravenously. Angiotensin II receptor blocker (olmesartan)-administered PAH mice and female Tsukuba hypertensive mice were also examined. Results C57BL/6 mice showed a decreased total wake time and increased nonrapid eye movement (NREM) sleep time during late pregnancy. Rapid eye movement (REM) sleep time did not change during the course of pregnancy. PAH mice exhibited a general slowing of EEG during late pregnancy and subsequently returned to apparently normal sleep/wakefulness after delivery. All PAH mice exhibited multiple focal leakages of Evans blue dye in the brain. Spike-and-wave discharges were observed in 50% of PAH mice. Olmesartan-administered PAH mice did not show general slowing of EEG. Tsukuba hypertensive mice showed a normal time spent in wakefulness and NREM sleep and a decreased total REM sleep time. Conclusions This study showed pregnant-stage-specific changes in sleep/wakefulness in C57BL/6 mice. Furthermore, PAH mice may be useful as an animal model for eclampsia.
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- 2017
17. The cell wall-targeted purple acid phosphatase AtPAP25 is critical for acclimation ofArabidopsis thalianato nutritional phosphorus deprivation
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Sheng Ying, Satomi Kanno, Vicki L. Knowles, Yi-Min She, William C. Plaxton, Joonho Park, Hernan A. Del Vecchio, and Keitaro Tanoi
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0106 biological sciences ,Glycosylation ,Acclimatization ,Acid Phosphatase ,Phosphatase ,Mutant ,Arabidopsis ,Plant Science ,Plant Roots ,01 natural sciences ,Isozyme ,03 medical and health sciences ,Cell Wall ,Gene Expression Regulation, Plant ,Genetics ,Arabidopsis thaliana ,Promoter Regions, Genetic ,Glycoproteins ,030304 developmental biology ,0303 health sciences ,biology ,Arabidopsis Proteins ,Acid phosphatase ,Phosphorus ,Cell Biology ,Plants, Genetically Modified ,biology.organism_classification ,Adaptation, Physiological ,Complementation ,Biochemistry ,Cell culture ,Mutation ,biology.protein ,010606 plant biology & botany - Abstract
Plant purple acid phosphatases (PAPs) belong to a relatively large gene family whose individual functions are poorly understood. Three PAP isozymes that are up-regulated in the cell walls of phosphate (Pi)-starved (-Pi) Arabidopsis thaliana suspension cells were purified and identified by MS as AtPAP12 (At2g27190), AtPAP25 (At4g36350) and AtPAP26 (At5g34850). AtPAP12 and AtPAP26 were previously isolated from the culture medium of -Pi cell cultures, and shown to be secreted by roots of Arabidopsis seedlings to facilitate Pi scavenging from soil-localized organophosphates. AtPAP25 exists as a 55 kDa monomer containing complex NX(S/T) glycosylation motifs at Asn172, Asn367 and Asn424. Transcript profiling and immunoblotting with anti-AtPAP25 immune serum indicated that AtPAP25 is exclusively synthesized under -Pi conditions. Coupled with potent mixed-type inhibition of AtPAP25 by Pi (I50 = 50 μm), this indicates a tight feedback control by Pi that prevents AtPAP25 from being synthesized or functioning as a phosphatase except when Pi levels are quite low. Promoter-GUS reporter assays revealed AtPAP25 expression in shoot vascular tissue of -Pi plants. Development of an atpap25 T-DNA insertion mutant was arrested during cultivation on soil lacking soluble Pi, but rescued upon Pi fertilization or complementation with AtPAP25. Transcript profiling by quantitative RT-PCR indicated that Pi starvation signaling was attenuated in the atpap25 mutant. AtPAP25 exhibited near-optimal phosphatase activity with several phosphoproteins and phosphoamino acids as substrates. We hypothesize that AtPAP25 plays a key signaling role during Pi deprivation by functioning as a phosphoprotein phosphatase rather than as a non-specific scavenger of Pi from extracellular P-monoesters.
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- 2014
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18. A step towards demystifying sleep physiology: Forward genetics approach in mice
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Masashi Yanagisawa, Aya Ikkyu, Takahiro Ezaki, Chika Miyoshi, Staci Jakyong Kim, Mana Yamada, Noriko Hotta-Hirashima, Miyo Kakizaki, Hiromasa Funato, Shigeharu Wakana, and Satomi Kanno
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General Neuroscience ,Psychology ,Sleep in non-human animals ,Neuroscience ,Forward genetics - Published
- 2019
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19. Forward genetic analysis of sleep in randomly mutagenized mice
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Shigeharu Wakana, Masashi Yanagisawa, Manabu Abe, Takato Honda, Toshiya Yonezawa, Aya Ikkyu, Tomoyuki Fujiyama, Seiya Mizuno, Satoru Takahashi, Tomohiro Suzuki, Hiroki Muramoto, Hiromasa Funato, Fumihiro Sugiyama, Zhiqiang Wang, Kenji Sakimura, Miyo Kakizaki, Kanako Harano, Jing Ma, Atsushi Watanabe, Chika Miyoshi, Noriko Hotta-Hirashima, Kazuhiko Kume, Takeshi Kanda, Joseph S. Takahashi, Vivek Kumar, Staci Jakyong Kim, Haruna Komiya, Qinghua Liu, Ikuo Miura, Yu Hayashi, Jun Tomita, Fuyuki Asano, Satomi Kanno, Shin Nakane, Shinichi Miyazaki, Makito Sato, and Linzi Connor
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0301 basic medicine ,medicine.medical_specialty ,Rapid eye movement sleep ,Biology ,medicine.disease_cause ,Non-rapid eye movement sleep ,Article ,03 medical and health sciences ,Mice ,Internal medicine ,Surveys and Questionnaires ,mental disorders ,medicine ,Animals ,Protein kinase A ,Gene ,Mutation ,Multidisciplinary ,musculoskeletal, neural, and ocular physiology ,Accidents, Traffic ,Neurosciences ,Sleep in non-human animals ,Forward genetics ,Sleep deprivation ,030104 developmental biology ,Endocrinology ,medicine.symptom ,psychological phenomena and processes - Abstract
Sleep is a behavior conserved from invertebrates to vertebrates, and tightly regulated in a homeostatic manner. The molecular and cellular mechanism determining the amount of rapid eye movement sleep (REMS) and non-REMS (NREMS) remains unknown. Here we identified two dominant mutations affecting sleep/wakefulness through an electroencephalogram/electromyogram-based screening of randomly mutagenized mice. A splicing mutation of the Sik3 protein kinase gene causes a profound decrease in total wake time, due to an increase in inherent sleep need. Sleep deprivation affects regulatory-site phosphorylation of the kinase. Sik3 orthologues regulate sleep also in fruit flies and roundworms. A missense mutation of the leak cation channel NALCN reduces the total amount and episode duration of REMS, apparently by increasing the excitability of REMS-inhibiting neurons. Our results substantiate the utility of forward genetic approach for sleep behaviors in mice, demonstrating the role of SIK3 and NALCN in regulating the amount of NREMS and REMS, respectively.
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- 2016
20. Identification of mutations through dominant screening for obesity using C57BL/6 substrains
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Staci Jakyong Kim, Miyo Kakizaki, Satomi Kanno, Ikuo Miura, Makito Sato, Joseph S. Takahashi, Vivek Kumar, Hiromasa Funato, Tomohiro Suzuki, Masashi Yanagisawa, Kimio Kobayashi, Chika Miyoshi, Aya Ikkyu, Hideki Kaneda, Takato Honda, Tomoyuki Fujiyama, Haruna Komiya, Noriko Hotta, Mohammad Sarowar Hossain, Shigeharu Wakana, and Fuyuki Asano
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0301 basic medicine ,Male ,Hypothalamus ,Biology ,Polymorphism, Single Nucleotide ,Article ,03 medical and health sciences ,Polymorphism (computer science) ,Exome Sequencing ,medicine ,Basic Helix-Loop-Helix Transcription Factors ,Animals ,Base sequence ,Genetic Predisposition to Disease ,Amino Acid Sequence ,Genetic Testing ,Obesity ,Luciferases ,Gene ,Exome sequencing ,Genetic testing ,Genes, Dominant ,Genetics ,Multidisciplinary ,medicine.diagnostic_test ,Base Sequence ,Neuropeptides ,Chromosome Mapping ,medicine.disease ,Phenotype ,Mice, Mutant Strains ,Diet ,Pedigree ,Mice, Inbred C57BL ,Repressor Proteins ,Disease Models, Animal ,030104 developmental biology ,Gene Expression Regulation ,Mutation ,Receptor, Melanocortin, Type 4 ,Identification (biology) ,Female - Abstract
The discovery of leptin substantiated the usefulness of a forward genetic approach in elucidating the molecular network regulating energy metabolism. However, no successful dominant screening for obesity has been reported, which may be due to the influence of quantitative trait loci between the screening and counter strains and the low fertility of obese mice. Here, we performed a dominant screening for obesity using C57BL/6 substrains, C57BL/6J and C57BL/6N, with the routine use of in vitro fertilization. The screening of more than 5000 mutagenized mice established two obese pedigrees in which single nucleotide substitutions in Mc4r and Sim1 genes were identified through whole-exome sequencing. The mutation in the Mc4r gene produces a premature stop codon and the mutant SIM1 protein lacks transcriptional activity, showing that the haploinsufficiency of SIM1 and MC4R results in obesity. We further examined the hypothalamic neuropeptide expressions in the mutant pedigrees and mice with diet-induced obesity, which showed that each obesity mouse model has distinct neuropeptide expression profiles. This forward genetic screening scheme is useful and applicable to any research field in which mouse models work.
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- 2016
21. Performance and Limitations of Phosphate Quantification: Guidelines for Plant Biologists
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Laurent Nussaume, Hélène Javot, Satomi Kanno, Thibault Dartevelle, Laura Cuyas, Mohamed Hanchi, Tomoko M. Nakanishi, Marie-Christine Thibaud, Elisabeth Gout, Richard Bligny, Biologie végétale et microbiologie environnementale - UMR7265 (BVME), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)-Aix Marseille Université (AMU)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Signalisation de l'Adaptation des Végétaux à l'Environnement (SAVE), Laboratoire de physiologie cellulaire végétale (LPCV), Université Joseph Fourier - Grenoble 1 (UJF)-Institut National de la Recherche Agronomique (INRA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Tokyo University of Science [Tokyo], ANR-13-ADAP-0008,Reglisse,Régulation de l'interconversion des glycérolipides chez les plantes en réponse aux variations environnementales(2013), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Plant Environmental Physiology and Stress Signaling (PEPSS), Physiologie cellulaire et végétale (LPCV), Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)
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Electrophoresis ,Genetic Markers ,0106 biological sciences ,0301 basic medicine ,Therapeutic gene modulation ,Magnetic Resonance Spectroscopy ,X-Ray spectrometry ,Physiology ,[SDV]Life Sciences [q-bio] ,Mineral nutrition ,Biosensing Techniques ,Plant Science ,Computational biology ,Imaging techniques ,Biology ,Bioinformatics ,01 natural sciences ,Plant life ,Phosphates ,03 medical and health sciences ,chemistry.chemical_compound ,High complexity ,ICP-MS ,Chromatography ,Mass spectrometry ,Abiotic stress ,ICP-AES ,Phosphorus Isotopes ,Phosphorus ,Cell Biology ,General Medicine ,Plant ,Plants ,Phosphate ,030104 developmental biology ,chemistry ,Phosphate quantification ,Radioisotope imaging system ,SIMS ,010606 plant biology & botany - Abstract
International audience; Phosphate (Pi) is a macronutrient that is essential for plant life. Several regulatory components involved in Pi homeostasis have been identified, revealing a very high complexity at the cellular and subcellular levels. Determining the Pi content in plants is crucial to understanding this regulation, and short real-time(33)Pi uptake imaging experiments have shown Pi movement to be highly dynamic. Furthermore, gene modulation by Pi is finely controlled by localization of this ion at the tissue as well as the cellular and subcellular levels. Deciphering these regulations requires access to and quantification of the Pi pool in the various plant compartments. This review presents the different techniques available to measure, visualize and trace Pi in plants, with a discussion of the future prospects.
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- 2016
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22. A novel role for the root cap in phosphate uptake and homeostasis
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Tomoko M. Nakanishi, Laurent Nussaume, Serge Chiarenza, Etienne Delannoy, Hélène Javot, Benjamin Péret, Jean-François Arrighi, Satomi Kanno, Elena Marin, Richard Berthomé, Marie-Christine Thibaud, Vincent Bayle, Biologie végétale et microbiologie environnementale - UMR7265 (BVME), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Plant Environmental Physiology and Stress Signaling (PEPSS), Laboratoire des interactions plantes micro-organismes (LIPM), Institut National de la Recherche Agronomique (INRA)-Centre National de la Recherche Scientifique (CNRS), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Tokyo University of Science [Tokyo], CEA-TRANSRAD Transrad 2012 JSPS 22880009 Marie Curie Reintegration grant PIRG05GA2009 249173 PIGR05GA2009 249173, ANR-11-RSNR-0005,DEMETERRES,Développement de Méthodes bio-et Eco-Technologiques pour la Remédiation Raisonnée des Effluents et des Sols en appui à une stratégie de réhabilitation agricole post-accidentelle(2011), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Signalisation de l'Adaptation des Végétaux à l'Environnement (SAVE), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA), Institut National de la Recherche Agronomique (INRA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris-Saclay-Université Paris-Sud - Paris 11 (UP11), and ANR11-RSNR-0005,DEMETERRES
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0106 biological sciences ,0301 basic medicine ,QH301-705.5 ,Science ,[SDV]Life Sciences [q-bio] ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Phosphates ,03 medical and health sciences ,Transactivation ,chemistry.chemical_compound ,phosphate homeostasis ,Arabidopsis ,Botany ,Homeostasis ,33P imaging ,Biology (General) ,Psychological repression ,Root cap ,a. thaliana ,arabidopsis ,mineral nutrition ,plant biology ,root cap ,2. Zero hunger ,General Immunology and Microbiology ,biology ,General Neuroscience ,Optical Imaging ,Phosphorus Isotopes ,General Medicine ,15. Life on land ,Meristem ,biology.organism_classification ,Phosphate ,Cell biology ,Complementation ,030104 developmental biology ,Plant Root Cap ,chemistry ,Medicine ,Research Article ,010606 plant biology & botany - Abstract
The root cap has a fundamental role in sensing environmental cues as well as regulating root growth via altered meristem activity. Despite this well-established role in the control of developmental processes in roots, the root cap’s function in nutrition remains obscure. Here, we uncover its role in phosphate nutrition by targeted cellular inactivation or phosphate transport complementation in Arabidopsis, using a transactivation strategy with an innovative high-resolution real-time 33P imaging technique. Remarkably, the diminutive size of the root cap cells at the root-to-soil exchange surface accounts for a significant amount of the total seedling phosphate uptake (approximately 20%). This level of Pi absorption is sufficient for shoot biomass production (up to a 180% gain in soil), as well as repression of Pi starvation-induced genes. These results extend our understanding of this important tissue from its previously described roles in environmental perception to novel functions in mineral nutrition and homeostasis control. DOI: http://dx.doi.org/10.7554/eLife.14577.001, eLife digest All plants need phosphate to grow because it is a major component of DNA and many other biological molecules. Most of the Earth’s soil is poor in phosphate, and so farmland is routinely supplemented with fertilizers to provide crops with this essential nutrient. However, phosphate fertilizers are becoming scarce and their quality is expected to decline in the near future. Plant biologists must therefore determine how to adapt plants to a restricted supply of this resource, in order to sustain high crop yields for the growing world population. Plants are known to absorb phosphate through specific protein-based transporters located in the cells that make up the outer layer of roots. These proteins are highly concentrated at the root tip, and while this specialized tissue is well-known for perceiving gravity and light, it had not been shown to play a role in phosphate absorption. Kanno, Arrighi et al. have now used genetically modified Arabidopsis plants to demonstrate that phosphate can be taken up via the small cells that surround the root tip. The experiments showed that the absorbed phosphate rapidly reaches the leaves within minutes, helps the plant grow and modifies its metabolism. As the root tip can accumulate high amounts of phosphate in order to sustain its own activity, it was important to distinguish uptake of phosphate from the environment from redistribution of phosphate already within the plant. Kanno, Arrighi et al. tackled this issue through the development of a new radioactive micro-imaging technique. Phosphate transporters are also present within the cell layers within the root, but their purpose and activity are not well described. Further studies are needed to analyze the role of other root cell layers in phosphate uptake and transport, and the newly developed techniques will help decipher the mechanisms involved. DOI: http://dx.doi.org/10.7554/eLife.14577.002
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- 2016
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23. Author response: A novel role for the root cap in phosphate uptake and homeostasis
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Satomi Kanno, Jean-François Arrighi, Serge Chiarenza, Vincent Bayle, Richard Berthomé, Benjamin Péret, Hélène Javot, Etienne Delannoy, Elena Marin, Tomoko M Nakanishi, Marie-Christine Thibaud, and Laurent Nussaume
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- 2016
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24. Development of a 14C detectable real-time radioisotope imaging system for plants under intermittent light environment
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Masato Yamawaki, Satomi Kanno, Yoshimi Ohmae, Tomoko M. Nakanishi, Ryohei Sugita, Atsushi Hirose, S. Igarashi, and Keitaro Tanoi
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Light nucleus ,business.industry ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Analytical chemistry ,food and beverages ,Lighting system ,Plant biology ,Pollution ,Analytical Chemistry ,Low energy ,Nuclear Energy and Engineering ,Environmental science ,Radiology, Nuclear Medicine and imaging ,Calcium-45 ,Process engineering ,business ,Rice plant ,Spectroscopy - Abstract
A new real-time radioisotope imaging system (RRIS) to study the kinetics of nutrient uptake and transfer of photosynthetic products in a living plant was developed and evaluated through a test run. 14C is a common radioisotope of carbon and useful to trace the photosynthetic products as well as a low energy beta emitter. The rationale of this study was to develop a RRIS that has the ability to detect low energy beta emitters, such as 14C, 35S, and 45Ca. To achieve compatibility between the detection of low energy beta emitters and irradiation of the test plant, an intermittent lighting system was added to the RRIS. Furthermore, a commercially available digital camera was added to the RRIS for acquisition of photographic images of the test plants. The capabilities of the new RRIS were evaluated through a test run by using seedlings of rice plants and 35S-labeled sulfate. It was shown that the new RRIS was able to detect 35S absorbed by rice plant seedlings, and it was able to acquire photon-counting images and photographic images of the test plants simultaneously. Despite some limitations, the new RRIS provides a means to study the kinetics of elements in plants by utilizing low energy beta emitters.
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- 2012
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25. Development of real-time radioisotope imaging systems for plant nutrient uptake studies
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Satomi Kanno, Atsushi Hirose, Natsuko I. Kobayashi, Keitaro Tanoi, Masato Yamawaki, Laurent Nussaume, Hiroki Ishibashi, and Tomoko M. Nakanishi
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Materials science ,Microscope ,Arabidopsis ,Image processing ,General Biochemistry, Genetics and Molecular Biology ,Phosphates ,law.invention ,law ,Microscopy ,Wide dynamic range ,Botany ,Image Processing, Computer-Assisted ,Microscopic level ,Phosphorus Isotopes ,Water ,Biological Transport ,Oryza ,Articles ,Culture Media ,Plant development ,Microscopy, Fluorescence ,Isotope Labeling ,Water metabolism ,General Agricultural and Biological Sciences ,Biological system ,Iron Compounds - Abstract
Ionic nutrition is essential for plant development. Many techniques have been developed to image and (or) measure ionic movement in plants. Nevertheless, most of them are destructive and limit the analysis. Here, we present the development of radioisotope imaging techniques that overcome such restrictions and allow for real-time imaging of ionic movement. The first system, called macroimaging, was developed to visualize and measure ion uptake and translocation between organs at a whole-plant scale. Such a device is fully compatible with illumination of the sample. We also modified fluorescent microscopes to set up various solutions for ion uptake analysis at the microscopic level. Both systems allow numerical analysis of images and possess a wide dynamic range of detection because they are based on radioactivity.
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- 2012
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26. Analysis of the Iron Movement in the Root Tip Part Using Real-time Imaging System
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Satomi Kanno, Keitaro Tanoi, Natsuko I. Kobayashi, and Tomoko M. Nakanishi
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Physics ,Radiation ,Acoustics ,Real time imaging ,Root tip - Abstract
リアルタイムRIイメージングシステムを搭載したラジオアイソトープ顕微鏡(VIM-micro)を用いて,植物の根における55Feの動態を解析した。VIM-microの55Feに対する検出感度はイメージングプレートよりも顕著に高く,2分間の積算により,根における55Feの分布を可視化できた。10kBq/μLの55Feをシロイヌナズナとイネの根の下部側に処理し,その後2時間にわたって60枚の根の画像を取得することで55Feの動態を解析した。いずれの植物においても,55Feは根の先端部に優先的に分配された。阻害剤の処理,あるいは煮沸によって不活性化した根を,通常の根と比較解析したところ,30分以降に見られる55Feの根先端部への蓄積が,生物活性によるものであることが判明した。これらの結果により,Feは,重要なシンク器官である根端部に積極的に輸送されることが示された。
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- 2012
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27. A study of 32P-phosphate uptake in a plant by a real-time RI imaging system
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Atsushi Hirose, Masato Yamawaki, Akihiko Noda, Hiroki Ishibashi, K. Tanoi, Tomoko M. Nakanishi, and Satomi Kanno
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chemistry.chemical_compound ,chemistry ,Radiochemistry ,General Medicine ,General Chemistry ,Phosphate - Abstract
It is very important to visualize the process of nutrient absorption and distribution to study the physiological activity of the plant. We developed a real-time radioisotope (RI) imaging system, where RI tracers were applied to the plant sample. This system allowed the quantitative measurement concerning the uptake of nutrients labeled with radioisotopes, such as 45Ca, 35S, 32P and 14C as long as several days. The β-rays emitted from the sample were converted to light by a CsI(Tl) scintillator and were guided to a highly sensitive CCD camera. The scintillator surface was covered with an Al plate to avoid LED light penetration but allow selected β-ray penetration. We employed Lotus japonicus for the plant sample and observed the 32P-phosphate absorption in roots and the accumulation to the aboveground part of the plant. The environment condition of daytime and night was simulated by the ON/OFF of LED timer and the accumulation manner of the 32P-phosphate in roots and leaves during daytime and night was analyzed. The accumulation of 32P-phosphate in leaves was highly dependant on light irradiation and higher when the LEDs was turned on, whereas the absorption of 32P-phosphate in root was higher when the LEDs was turned off. The transfer function concerning the transportation of phosphate within the plant during the developmental stage was obtained from the analysis of 32P uptake images. We are now trying to get specific moving images of each radioisotope when two kinds of isotopes, such as 32P and 35S, were applied at the same time to the plant, through an image analysis.
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- 2011
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28. Double-Tracer Radiography with Sulfur-35 and Phosphorus-32 Using Imaging Plates in Brassica napus L
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Hiroki Ishibashi, Syohei Seyama, Keitaro Tanoi, Masato Yamawaki, Sayaka Masuda, Tomoko M. Nakanishi, Takashi Saito, Satomi Kanno, Atsushi Hirose, and Akihiko Noda
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Radiation ,Materials science ,biology ,Phosphorus ,Analytical chemistry ,Brassica ,chemistry.chemical_element ,Sulfuric acid ,biology.organism_classification ,Phosphorus-32 ,Sulfur ,chemistry.chemical_compound ,chemistry ,TRACER ,Shoot ,Phosphoric acid - Abstract
We present double-tracer autoradiography with 35S and 32P using imaging plates and an aluminum plate to visualize the individual distribution of sulfur and phosphorus in Brassica napus L.. Because of the different attenuation efficiencies of β-rays emitted from 35S and 32P, the specific image of 32P was taken when an aluminum plate was placed between the sample and the imaging plate. The specific image of 35S was obtained by subtracting the 32P image from the 35S and 32P image. It was observed that high amount of 35S was distributed at the edge of the leaves and in root tips. The 32P was distributed throughout the whole plant and it was found that the phosphorous amount was higher at the shoot apical meristems than those in leaves.
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- 2010
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29. Evaluation of 109Cd Detection Performance of a Real-Time RI Imaging System for Plant Research
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Keitaro Tanoi, Satomi Kanno, Atsushi Hirose, Akihiko Noda, Hiroki Ishibashi, Masato Yamawaki, and Tomoko M. Nakanishi
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Physics ,Radiation ,business.industry ,Image processing ,Scintillator ,Particle detector ,Nuclear physics ,Optics ,Scintillation counter ,Nuclide ,business ,Sensitivity (electronics) ,Visible spectrum - Abstract
In this study, real-time imaging using γ-emitting nuclide, 109Cd, was studied and sensitivity and resolution of the system we developed was evaluated. When RI was applied to the plant, the radiation from the RI distributed throughout the plant was converted to visible light by a scintillator. Then, this weak light was multiplied by a micro-channel plate(MCP)and photographed by a charge-coupled device(CCD)camera. 109Cd emits 88keV γ-rays together with 22keV X-rays, and therefore it is necessary to investigate effective condition for designing an observation system for the measurement of radiation from 109Cd. Analysis was performed to determine which rays, γ-rays or X-rays, were mainly detected by this system and the optimal scintillator thickness for imaging 109Cd was investigated. Then the sensitivity and resolution of the system was evaluated.
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- 2010
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30. The development of real-time RI imaging system for plant under light environment
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Satomi Kanno, Akihiko Noda, Masato Yamawaki, Tomoko M. Nakanishi, Hiroki Ishibashi, Atsushi Hirose, and Keitaro Tanoi
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Physics ,Optics ,Nuclear Energy and Engineering ,Ccd camera ,business.industry ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Radiology, Nuclear Medicine and imaging ,business ,Pollution ,Spectroscopy ,Analytical Chemistry ,Highly sensitive - Abstract
We present the real-time RI imaging and analyzing system to study the kinetics of nutrient uptake manner in a living plant. The system allowed light condition for the up-ground part of the plant and continuous dark condition for the root part, therefore, light/dark cycles was set as 16/8 h. There was 9,000 lx of LED lights in an aluminum container where the plant was set. The container was shielded well so that there was no light leakage to damage highly sensitive CCD camera which detected beta-rays from the sample. With this system, RI imaging was able to perform for 6 days without damaging the activity of the plant.
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- 2009
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31. Real-time Imaging of 32P Translocation in Soybean Plants
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Satomi Kanno, Tomoko M. Nakanishi, and Keitaro Tanoi
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Radiation ,Real time imaging - Abstract
リン酸は,植物のリン酸栄養環境応答時の認識機構に関わる重要な因子である。そこで,植物体内のリン酸吸収移行の特徴について知るためにリン酸欠乏下のダイズを用い32Pトレーサ実験を行った。トレーサ実験では,従来のImaging Plateと,リン酸の速い動きを定量的にイメージングできるリアルタイムRIイメージングシステムを用いた。その結果,リン酸は通常条件で栽培した場合には常に新葉への移行が古い葉への移行よりも約3倍高くなるのに対して,リン酸欠乏環境下では古い葉へも積極的に移行することが示された。
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- 2009
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32. Development of a Fluorescent Microscope Combined with a Real-time Autoradiography System
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Yoshitake Hayashi, Satomi Kanno, Tomoko M. Nakanishi, Naoto Nihei, and Hiroki Rai
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Radiation ,Microscope ,Chemistry ,Resolution (electron density) ,Analytical chemistry ,Magnification ,Phosphor ,Fluorescence ,law.invention ,Green fluorescent protein ,Autoradiograph ,law ,Fluorescence microscope ,Biomedical engineering - Abstract
For combination with microscope, we developed real-time autoradiography system for micro-scale analysis with adjustment of the CsI(Ti) scintillator thickness for higher resolution and applying tapered fiber optic plate for magnification of autoradiograph image. We combined real-time autoradiography system with an inverted fluorescent microscope so that an autoradiograph image as well as fluorescent image, bright-field image can be acquired at the same time. In the case of observation of sliced soybean stalk traced 45CaCl, the fluorescent and bright-field image was acquired which magnified to 50 times, the autoradiograph image of 45Ca distribution in the tissue was acquired in almost same scale. The new microscopic system which can acquire autoradiograph image of labeled signals (low molecular weight) is expected to develop the signal transduction study and gene expression, combined with fluorescent protein techniques such as GFP etc.
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- 2008
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33. Development of a Real-time Autoradiography System to Analyze the Movement of the Compounds Labeled with .BETA.-ray Emitting Nuclide in a Living Plant
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Tomoyuki Ohya, Satomi Kanno, Tomoko M. Nakanishi, Hiroki Rai, Yoshitake Hayashi, and Naoto Nihei
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Radiation ,Optical fiber ,Chemistry ,Resolution (electron density) ,Radiochemistry ,food and beverages ,Image intensifier ,Image processing ,Scintillator ,law.invention ,law ,Beta particle ,Nuclide ,A fibers - Abstract
Real-time imaging analysis in a living plant allows studying the mechanism of chemical transport or signal transduction more in detail. We present the real-time autoradiography system to analyze the movement of β-ray emitters in a living plant. The system was consisted of a FOS (a fiber optic plate deposited with CsI(Ti) scintillator) and a GaAsP imaging intensifier unit. Though the resolution is about the same as that of an imaging plate(IP), the sensitivity was more than 10 times higher than that of an IP. Using this system, 32P movement in a young leaf of soybean was analyzed when 32P was supplied from the root.
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- 2008
- Full Text
- View/download PDF
34. Real-time imaging of radioisotope labeled compounds in a living plant
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Satomi Kanno, Keitaro Tanoi, Yoshitake Hayashi, H. Rai, Tomoyuki Ohya, and Tomoko M. Nakanishi
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Materials science ,business.industry ,Health, Toxicology and Mutagenesis ,Resolution (electron density) ,Public Health, Environmental and Occupational Health ,Image intensifier ,Real time imaging ,Scintillator ,Pollution ,Plant tissue ,Analytical Chemistry ,law.invention ,Optics ,Nuclear Energy and Engineering ,law ,Radiology, Nuclear Medicine and imaging ,Microchannel plate detector ,business ,Sensitivity (electronics) ,Spectroscopy ,Biomedical engineering ,Visible spectrum - Abstract
We developed a quantitative, real-time imaging system of labeled compounds in a living plant. The system was composed of CsI scintillator to convert β-rays to visible light and an image intensifier unit (composed of GaAsP semiconductor and MCP; micro channel plate) to detect extremely weak light. When the sensitivity and resolution of the image of our system was compared with that of an imaging plate (IP), the sensitivity of our system (with 20 minutes) was higher than that of an IP, with similar quality to that of an IP. Using this system, the translocation of 32P in a soybean plant tissue was shown in successive images.
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- 2007
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35. Root Architecture Responses: In Search of Phosphate
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Ricarda Jost, Oliver Berkowitz, Satomi Kanno, Benjamin Péret, Laurent Nussaume, Thierry Desnos, Biologie végétale et microbiologie environnementale - UMR7265 (BVME), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Signalisation de l'Adaptation des Végétaux à l'Environnement (SAVE), ANR-11-RSNR-0005,DEMETERRES,Développement de Méthodes bio-et Eco-Technologiques pour la Remédiation Raisonnée des Effluents et des Sols en appui à une stratégie de réhabilitation agricole post-accidentelle(2011), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), and Plant Environmental Physiology and Stress Signaling (PEPSS)
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0106 biological sciences ,Physiology ,[SDV]Life Sciences [q-bio] ,Foraging ,chemistry.chemical_element ,Plant Science ,Biology ,01 natural sciences ,Phosphorus metabolism ,03 medical and health sciences ,chemistry.chemical_compound ,Botany ,Genetics ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,Trophic level ,2. Zero hunger ,0303 health sciences ,Topsoil ,Phosphorus ,fungi ,food and beverages ,Soil chemistry ,15. Life on land ,Phosphate ,chemistry ,Nucleic acid ,010606 plant biology & botany - Abstract
Soil phosphate represents the only source of phosphorus for plants and, consequently, is its entry into the trophic chain. This major component of nucleic acids, phospholipids, and energy currency of the cell (ATP) can limit plant growth because of its low mobility in soil. As a result, root responses to low phosphate favor the exploration of the shallower part of the soil, where phosphate tends to be more abundant, a strategy described as topsoil foraging. We will review the diverse developmental strategies that can be observed among plants by detailing the effect of phosphate deficiency on primary and lateral roots. We also discuss the formation of cluster roots: an advanced adaptive strategy to cope with low phosphate availability observed in a limited number of species. Finally, we will put this work into perspective for future research directions.
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- 2014
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36. Extraction of Ions from Leaf Sections
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Satomi Kanno, Tetsuro Mimura, Miwa Ohnishi, and Yuko Kurita
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Chromatography ,Strategy and Management ,Mechanical Engineering ,Ion chromatography ,Extraction (chemistry) ,Metals and Alloys ,chemistry.chemical_element ,Plant physiology ,Inorganic ions ,Calcium ,Industrial and Manufacturing Engineering ,Ion ,Plant science ,chemistry - Published
- 2014
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37. Phosphate import in plants: focus on the PHT1 transporters
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Laurent Nussaume, Elena Marin, Amal Ayadi, Hélène Javot, Marie-Christine Thibaud, Nathalie Pochon, Tomoko M. Nakanishi, and Satomi Kanno
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Mineral nutrition ,Arabidopsis ,chemistry.chemical_element ,plant ,Review Article ,Plant Science ,transporters ,Biology ,lcsh:Plant culture ,transcriptional and post-translational regulation ,Homology (biology) ,chemistry.chemical_compound ,Botany ,lcsh:SB1-1110 ,Phosphate uptake ,phosphate ,Phosphorus ,food and beverages ,Transporter ,PHT1 ,biology.organism_classification ,Phosphate ,Yeast ,chemistry ,Biochemistry ,Membrane protein ,transporter ,uptake ,Function (biology) - Abstract
The main source of phosphorus for plants is inorganic phosphate (Pi), which is characterized by its poor availability and low mobility. Uptake of this element from the soil relies heavily upon the PHT1 transporters, a specific family of plant plasma membrane proteins that were identified by homology with the yeast PHO84 Pi transporter. Since the discovery of PHT1 transporters in 1996, various studies have revealed that their function is controlled by a highly complex network of regulation. This review will summarize the current state of research on plant PHT1 multigenic families, including physiological, biochemical, molecular, cellular, and genetics studies.
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- 2011
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