75 results on '"Seda Kizilel"'
Search Results
2. Shear‐Triggered Release of Lipid Nanoparticles from Tissue‐Mimetic Hydrogels
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Selcan Karaz, Gizem Akay, Ismail C. Karaoglu, Mertcan Han, Sedat Nizamoglu, Seda Kizilel, and Erkan Senses
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Polymers and Plastics ,Organic Chemistry ,Materials Chemistry - Published
- 2023
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3. Nonlinear Architectures Can Alter the Dynamics of Polymer–Nanoparticle Composites
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Qingteng Zhang, Erkan Senses, Madhusudan Tyagi, Suresh Narayanan, Seda Kizilel, Muhammad Anwaar Nazeer, and Saeid Darvishi
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chemistry.chemical_classification ,Materials science ,Polymers and Plastics ,Polymer nanocomposite ,Linear polymer ,Organic Chemistry ,Polymer nanoparticle ,Nanotechnology ,02 engineering and technology ,Polymer ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Inorganic Chemistry ,Nonlinear system ,chemistry ,Materials Chemistry ,0210 nano-technology - Abstract
Polymer nanocomposites exhibit remarkable physical properties that are attractive for many applications. These systems have been so far investigated using linear polymer chains; the role of polymer...
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- 2021
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4. Chitosan-anthracene hydrogels as controlled stiffening networks
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Muhammad Anwaar Nazeer, Erdost Yildiz, Afsun Sahin, Syeda Rubab Batool, and Seda Kizilel
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Cell Survival ,Riboflavin ,Radical polymerization ,macromolecular substances ,02 engineering and technology ,Cell morphology ,complex mixtures ,Biochemistry ,Polymerization ,Chitosan ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Structural Biology ,Elastic Modulus ,Animals ,Cytotoxicity ,Molecular Biology ,030304 developmental biology ,Anthracenes ,0303 health sciences ,Anthracene ,Tissue Scaffolds ,technology, industry, and agriculture ,Hydrogels ,3T3 Cells ,General Medicine ,021001 nanoscience & nanotechnology ,Photopolymer ,chemistry ,Chemical engineering ,Self-healing hydrogels ,Surface modification ,0210 nano-technology - Abstract
In this study, we report the synthesis of single and dual-crosslinked anthracene-functional chitosan-based hydrogels in the absence of toxic initiators. Single crosslinking was achieved through dimerization of anthracene, whereas dual-crosslinked hydrogel was formed through dimerization of anthracene and free radical photopolymerization of methacrylated-chitosan in the presence of non-toxic initiator riboflavin, a well-known vitamin B2. Both single and dual-crosslinked hydrogels were found to be elastic, as was determined through rheological analysis. We observed that the dual-crosslinked hydrogels exhibited higher Young's modulus than the single-crosslinked hydrogels, where the modulus for single and dual-crosslinked hydrogels were measured as 9.2 ± 1.0 kPa and 26 ± 2.8 kPa, respectively resulting in significantly high volume of cells in dual-crosslinked hydrogel (2.2 × 107 μm3) compared to single-crosslinked (4.9 × 106 μm3). Furthermore, we investigated the cytotoxicity of both hydrogels towards 3T3-J2 fibroblast cells through CellTiter-Glo assay. Finally, immunofluorescence staining was carried out to evaluate the impact of hydrogel modulus on cell morphology. This study comprehensively presents functionalization of chitosan with anthracene, uses nontoxic initiator riboflavin, modulates the degree of crosslinking through dimerization of anthracene and free radical photopolymerization, and further modulates cell behavior through the alterations of hydrogel properties.
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- 2021
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5. Immunological response of polysaccharide nanogel-incorporating PEG hydrogels in an
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Tugba, Bal, Ismail Can, Karaoglu, Fusun Sevval, Murat, Esra, Yalcin, Yoshihiro, Sasaki, Kazunari, Akiyoshi, and Seda, Kizilel
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Mice ,Cholesterol ,Acrylates ,Animals ,Nanogels ,Polyethyleneimine ,Biocompatible Materials ,Hydrogels ,Streptozocin ,Diabetes Mellitus, Experimental ,Polyethylene Glycols - Abstract
Cell-based therapies hold significant advantages in comparison with the traditional drug-based or injection-based treatments. However, for long-term functional cellular implants, immune acceptance must be established. To accomplish the acceptance of the implanted cells, various biomaterial systems have been studied. Nanogels have shown great potential for modulation of cellular microenvironments, acting as a physical barrier between the immune system and the implant. However, internalization of nano-scale materials by implanted cells is not desirable and is yet to be overcome. In this study, we incorporated acrylate modified cholesterol-bearing pullulan (CHPOA) nanogels into poly (ethylene glycol) diacrylate (PEGDA) hydrogels through covalent crosslinking, where we used visible light-induced photopolymerization. We characterized morphology and swelling properties of CHPOA incorporated PEG composite hydrogels using FE-SEM and gravimetric analysis. Also, we investigated the biocompatibility properties of composite hydrogels
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- 2022
6. Ruthenium-Induced Corneal Collagen Crosslinking Under Visible Light
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Ayesha Gulzar, Erdost Yıldız, Hümeyra N. Kaleli, Muhammad A. Nazeer, Noushin Zibandeh, Anjum N. Malik, Ayşe Y. Taş, Ismail Lazoğlu, Afsun Şahin, and Seda Kizilel
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Photosensitizing Agents ,Ultraviolet Rays ,Riboflavin ,Biomedical Engineering ,General Medicine ,Keratoconus ,Biochemistry ,Ruthenium ,Biomaterials ,Cornea ,Cross-Linking Reagents ,Photochemotherapy ,Animals ,Humans ,Cattle ,Collagen ,Molecular Biology ,Biotechnology - Abstract
Corneal collagen crosslinking (CXL) is a commonly used minimally invasive surgical technique to prevent the progression of corneal ectasias, such as keratoconus. Unfortunately, riboflavin/UV-A light-based CXL procedures have not been successfully applied to all patients, and result in frequent complications, such as corneal haze and endothelial damage. We propose a new method for corneal crosslinking by using a Ruthenium (Ru) based water-soluble photoinitiator and visible light (430 nm). Tris(bipyridine)ruthenium(II) ([Ru(bpy)
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- 2022
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7. Multiscale Dynamics of Lipid Vesicles in Polymeric Microenvironment
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Selcan Karaz, Mertcan Han, Gizem Akay, Asim Onal, Sedat Nizamoglu, Seda Kizilel, and Erkan Senses
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Process Chemistry and Technology ,Chemical Engineering (miscellaneous) ,Soft Condensed Matter (cond-mat.soft) ,FOS: Physical sciences ,Filtration and Separation ,Condensed Matter - Soft Condensed Matter ,liposomes ,lipid bilayers ,membrane dynamics ,polymer solutions ,phase transition ,microviscosity - Abstract
Understanding dynamic and complex interaction of biological membranes with extracellular matrices plays a crucial role in controlling a variety of cell behavior and functions, from cell adhesion and growth to signaling and differentiation. Tremendous interest in tissue engineering has made it possible to design polymeric scaffolds mimicking the topology and mechanical properties of the native extracellular microenvironment; however, a fundamental question remains unanswered: that is, how the viscoelastic extracellular environment modifies the hierarchical dynamics of lipid membranes. In this work, we used aqueous solutions of poly(ethylene glycol) (PEG) with different molecular weights to mimic the viscous medium of cells and nearly monodisperse unilamellar DMPC/DMPG liposomes as a membrane model. Using small-angle X-ray scattering (SAXS), dynamic light scattering, temperature-modulated differential scanning calorimetry, bulk rheology, and fluorescence lifetime spectroscopy, we investigated the structural phase map and multiscale dynamics of the liposome–polymer mixtures. The results suggest an unprecedented dynamic coupling between polymer chains and phospholipid bilayers at different length/time scales. The microviscosity of the lipid bilayers is directly influenced by the relaxation of the whole chain, resulting in accelerated dynamics of lipids within the bilayers in the case of short chains compared to the polymer-free liposome case. At the macroscopic level, the gel-to-fluid transition of the bilayers results in a remarkable thermal-stiffening behavior of polymer–liposome solutions that can be modified by the concentration of the liposomes and the polymer chain length.
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- 2022
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8. Stimuli‐responsive poly(hydroxyethyl methacrylate) hydrogels from carboxylic acid‐functionalized crosslinkers
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Nilhan Kayaman-Apohan, D. Ceren Oran, Tugba Bal, H. Betul Bingol, Seda Kizilel, Sesil Agopcan-Cinar, and Duygu Avci
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chemistry.chemical_classification ,Materials science ,Rhodamines ,Carboxylic acid ,technology, industry, and agriculture ,Metals and Alloys ,Biomedical Engineering ,Hydrogels ,macromolecular substances ,(Hydroxyethyl)methacrylate ,Methacrylate ,Controlled release ,Biomaterials ,Rhodamine 6G ,chemistry.chemical_compound ,Cross-Linking Reagents ,Photopolymer ,chemistry ,Delayed-Action Preparations ,Self-healing hydrogels ,Polymer chemistry ,Ceramics and Composites ,Methacrylates ,Ethylene glycol - Abstract
Tailoring hydrogel properties by modifications of the crosslinker structure is a good method for the design of hydrogels with a wide range of properties. In this study, two novel carboxylic acid-functionalized dimethacrylate crosslinkers (1a and 2a) are synthesized by the reaction of poly(ethylene glycol) or 2-hydroxyethyl disulfide with tert-butyl α-bromomethacrylate followed by cleavage of tert-butyl groups using trifluoroacetic acid. Their copolymerization reactivity with 2-hydroxyethyl methacrylate (HEMA) investigated by photopolymerization studies performed on photo-differential scanning calorimetry shows higher reactivity of 2a compared to 1a. These crosslinkers are then used at different ratios for fabrication of pH- and redox-responsive poly(2-hydroxyethyl methacrylate)-based hydrogels. The swelling behavior of the hydrogels is found to be dependent on the structure of the crosslinker, degree of crosslinking, pH, and CaCl2 concentration. The redox-responsive behavior is demonstrated by degradation of the hydrogel upon exposure to 1,4-dithiothreitol. The dye Rhodamine 6G and the drug resorcinol are used as models to demonstrate the pH and redox dependent release of loaded compounds from the hydrogels. The electrostatic interactions between the carboxylate groups and the positively charged R6G are found to govern the release profile in DTT and counteract the diffusion of dye molecules and significant amount of release (79% in 120 hr) occurs only at highly acidic conditions. The degradation mediated release in DTT is observed better in case of resorcinol (around 88% in 5 hr). Overall, these hydrogels can be regarded as good candidates for several applications, such as matrices for controlled release, tissue repair, and regeneration.
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- 2019
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9. Calcification resistance of polyisobutylene and polyisobutylene‐based materials
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Joseph P. Kennedy, Seda Kizilel, Nihan Nugay, Ugur Bozuyuk, Turgut Nugay, Nur Cicek Kekec, and Mukrime Birgul Akolpoglu
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Materials science ,Polymers and Plastics ,medicine ,Composite material ,medicine.disease ,Calcification - Published
- 2019
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10. Recent advances in the design of implantable insulin secreting heterocellular islet organoids
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Ana Rita Sousa, M. Birgul Akolpoglu, Mariana B. Oliveira, Yasemin Inceoglu, Ugur Bozuyuk, João F. Mano, and Seda Kizilel
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endocrine system ,Cell type ,medicine.medical_treatment ,Biophysics ,Islets of Langerhans Transplantation ,Bioengineering ,02 engineering and technology ,Biomaterials ,03 medical and health sciences ,3D cell culture ,Islets of Langerhans ,Tissue engineering ,Insulin-Secreting Cells ,medicine ,Organoid ,Humans ,Insulin ,Islet transplantation ,030304 developmental biology ,0303 health sciences ,geography ,geography.geographical_feature_category ,business.industry ,Immunosuppression ,021001 nanoscience & nanotechnology ,Islet ,Cell biology ,Transplantation ,Organoids ,Diabetes Mellitus, Type 1 ,Type 1 diabetes ,Mechanics of Materials ,Ceramics and Composites ,Spheroids ,Co-culture ,0210 nano-technology ,business - Abstract
Islet transplantation has proved one of the most remarkable transmissions from an experimental curiosity into a routine clinical application for the treatment of type I diabetes (T1D). Current efforts for taking this technology one-step further are now focusing on overcoming islet donor shortage, engraftment, prolonged islet availability, post-transplant vascularization, and coming up with new strategies to eliminate lifelong immunosuppression. To this end, insulin secreting 3D cell clusters composed of different types of cells, also referred as heterocellular islet organoids, spheroids, or pseudoislets, have been engineered to overcome the challenges encountered by the current islet transplantation protocols. β-cells or native islets are accompanied by helper cells, also referred to as accessory cells, to generate a cell cluster that is not only able to accurately secrete insulin in response to glucose, but also superior in terms of other key features (e.g. maintaining a vasculature, longer durability in vivo and not necessitating immunosuppression after transplantation). Over the past decade, numerous 3D cell culture techniques have been integrated to create an engineered heterocellular islet organoid that addresses current obstacles. Here, we first discuss the different cell types used to prepare heterocellular organoids for islet transplantation and their contribution to the organoids design. We then introduce various cell culture techniques that are incorporated to prepare a fully functional and insulin secreting organoids with select features. Finally, we discuss the challenges and present a future outlook for improving clinical outcomes of islet transplantation. published
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- 2021
11. Sensitivity Study for the Key Parameters in Heterospheroid Preparation with Insulin-Secreting β-Cells and Mesenchymal Stem Cells
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Yasemin Inceoglu, Seda Kizilel, Erdal Karaoz, Tugba Bal, İstinye Üniversitesi, Tıp Fakültesi, Temel Tıp Bilimleri Bölümü, and Karaoz, Erdal
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endocrine system ,Peg Hydrogel ,medicine.medical_treatment ,0206 medical engineering ,Biomedical Engineering ,02 engineering and technology ,Glucagon ,Glp-1 ,Immune Protection ,Proinflammatory cytokine ,Msc ,Biomaterials ,Immune system ,Insulin Secretion ,medicine ,2. Zero hunger ,geography ,geography.geographical_feature_category ,Chemistry ,Insulin ,Mesenchymal stem cell ,021001 nanoscience & nanotechnology ,Islet ,020601 biomedical engineering ,Cytokine Attack ,3. Good health ,Cell biology ,Transplantation ,Min6 ,0210 nano-technology ,Function (biology) - Abstract
The outcome of islet transplantation in clinics has been determined by the success of tissue engraftment. The strong immune attack that occurs upon transplantation of beta-cells plays a central role as this attack results in the failure of transplanted tissue. To improve tissue engraftment, deleterious effects of immune reactions should be minimized for Pull function and survival. Here, we report a systematic analysis of the effect of insulin-secreting beta-cell (MIN6) and mesenchymal stem cell (MSC) number and size on the function of beta-cells and present immune protection potential of heterospheroid structures through MSCs and synthetic scaffolds. We prepared 3D heterospheroids with MSCs and MIN6 cells through a hanging-drop approach. To precisely estimate the influence of critical parameters on heterospheroid size and insulin secretion function of beta-cells, we prepared heterospheroids using two independent input variables: (i) initial cell number in each droplet and (ii) MIN6:MSC ratio. We studied the influence of initial cell numbers of 200 and 500, and six different MIN6:MSC ratios (1:0, 0:1, 1:1, 2:1, 5:1, and 10:1) for the preparation of heterospheroids through the hanging drop. Next, we used PEG hydrogels as a semipermeable physical barrier to improve immune protection from cytokines. Through encapsulation of our heterospheroids within PEG hydrogel, we were able to observe sustained beta-cell survival and insulin secretion despite exposure of heterospheroids with proinflammatory cytokines. Insulin secretion was further promoted with glucagon like peptide-1 (GLP-1) incorporation within PEG hydrogel structure. This study is significant to demonstrate the synergistic effects of MIN6-MSC and scaffold-MIN6 interactions and to improve therapeutic efficacy of islet transplantation. Overall, this study comprehensively presents the optimum conditions for the preparation of MIN6-MSC spheroids, utilizes MSCs and GLP-1 functional PEG hydrogels as a scaffold to retain insulin secretion function and further demonstrates protection of heterospheroids exposed to proinflammatory cytokines. Scientific and Technological Research Council of Turkey (TUBITAK) under 1001-Scientific and Technological Research Projects Funding ProgramTurkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK) [MAG 113M232]; Koc University Seed Fund [SF.00028]; TUBITAK-BIDEBTurkiye Bilimsel ve Teknolojik Arastirma Kurumu (TUBITAK); Presidency of Turkey, Presidency of Strategy and Budget This study is supported by the Scientific and Technological Research Council of Turkey (TUBITAK) under 1001-Scientific and Technological Research Projects Funding Program (MAG 113M232) and Koc University Seed Fund SF.00028. T.B. is supported by TUBITAK-BIDEB. The authors gratefully acknowledge use of the services and facilities of the Koc University Research Center for Surface Science (KUYTAM) and Koc University Research Center for Translational Medicine (KUTTAM), funded by the Presidency of Turkey, Presidency of Strategy and Budget. The content is solely the responsibility of the authors and does not necessarily represent the official views of the Presidency of Strategy and Budget. 33455228 Q2
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- 2021
12. Optimization of a Gelatin–Potassium Phosphate Aqueous Two-Phase System for the Preparation of Hydrogel Microspheres
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Nihal Olcay Dogan, Pelin Erkoc, and Seda Kizilel
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chemistry.chemical_classification ,Materials science ,food.ingredient ,Aqueous solution ,0211 other engineering and technologies ,General Engineering ,Aqueous two-phase system ,02 engineering and technology ,Polymer ,021001 nanoscience & nanotechnology ,Gelatin ,chemistry.chemical_compound ,food ,chemistry ,Chemical engineering ,Polymerization ,Potassium phosphate ,Phase (matter) ,Emulsion ,General Materials Science ,0210 nano-technology ,021102 mining & metallurgy - Abstract
An aqueous two-phase system provides a simple route toward the preparation of gelatin emulsions. Here, we present a simple method to generate water-in-water (w/w) emulsions from an aqueous two-phase system: gelatin and potassium phosphate (K2HPO4) salt. Liquid gelatin forms as the dispersed phase of the two-phase emulsion system, and gelatin microspheres can be retrieved after a visible light-induced crosslinking reaction. We investigated the effect of the continuous phase volume ratio on the formation of the phase-separation and emulsification process. We also studied the influence of the polymerization method on the size and morphology of gelatin hydrogel particles. The results demonstrated that K2HPO4 is an appropriate phase-forming salt, where biodegradable gelatin particles obtained through this w/w emulsion system have potential for biomedical applications. In addition, sustained release of a model molecule, methylene blue, was observed for up to 5 days from gelatin particles. This system is advantageous because if provides an inexpensive emulsion platform that avoids the use of organic solvents or auxiliary polymers to form a continuous phase.
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- 2019
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13. Synthesis and design of biologically inspired biocompatible iron oxide nanoparticles for biomedical applications
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Aysu Ceren Okur, Gozde S. Demirer, Seda Kizilel, Demirer, Gözde S., Okur, Aysu C, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), College of Engineering, and Department of Chemical and Biological Engineering
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Chemical and biological engineering ,Materials science ,Biocompatibility ,Biomedical Engineering ,Nanoparticle ,Nanotechnology ,General Chemistry ,General Medicine ,Biocompatible material ,chemistry.chemical_compound ,chemistry ,Targeted drug-delivery ,Mri contrast agents ,Magnetic nanoparticles ,In-Vivo ,Gene-therapy ,Superparamagnetic nanoparticles ,Fe3o4 nanoparticles ,Prostate-cancer ,Cellular uptake ,Photoacoustic tomography ,General Materials Science ,Iron oxide nanoparticles - Abstract
During the last couple of decades considerable research efforts have been directed towards the synthesis and coating of iron oxide nanoparticles (IONPs) for biomedical applications. To address the current limitations, recent studies have focused on the design of new generation nanoparticle systems whose internalization and targeting capabilities have been improved through surface modifications. This review covers the most recent challenges and advances in the development of IONPs with enhanced quality, and biocompatibility for various applications in biotechnology and medicine., NA
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- 2020
14. Bisphosphonic Acid-Functionalized Cross-Linkers to Tailor Hydrogel Properties for Biomedical Applications
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Seda Kizilel, Melek Naz Guven, Oguz Okay, Umit Gulyuz, Duygu Avci, Dilem Ceren Oran, Tugba Bal, Merve Seckin Altuncu, Bal, Tuğba, Oran, Dilem Ceren, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Güven, Melek N., Altuncu, Merve S., Gülyüz, Ümit, Okay, Oğuz, Avcı, Duygu, College of Engineering, Graduate School of Sciences and Engineering, and Department of Chemical and Biological Engineering
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Biomineralization ,Polymers ,General Chemical Engineering ,Bone Tissue ,Phosphate ,02 engineering and technology ,Biomimetic Mineralization ,010402 general chemistry ,01 natural sciences ,Bone tissue ,In-vitro ,Biomimetic mineralization ,Network hydrogels ,Calcification ,Differentiation ,Nanocomposites ,Article ,lcsh:Chemistry ,Copolymer ,Network Hydrogels ,Chemistry ,technology, industry, and agriculture ,General Chemistry ,021001 nanoscience & nanotechnology ,Combinatorial chemistry ,Chemistry, multidisciplinary ,0104 chemical sciences ,lcsh:QD1-999 ,In-Vitro ,Self-healing hydrogels ,0210 nano-technology - Abstract
Two bisphosphonic acid-functionalized cross-linkers (one novel) with different spacer chain characteristics were synthesized and incorporated into hydrogels by copolymerization with 2-hydroxyethyl methacrylate at different ratios to control the hydrogels' swelling, mechanical properties, and ability to support mineralization for biomedical applications. The cross-linkers were synthesized by reaction of 2-isocyanatoethyl methacrylate and bisphosphonated diamines followed by selective dealkylation of the bisphosphonate ester groups. The hydrogels provide in vitro growth of carbonated apatite, morphology affected by the cross-linker structure. The hydrogels exhibit a high Young's modulus E (up to 400 kPa) and can sustain up to 10.2 +/- 0.1 MPa compressive stresses. E and hence the cross-link density significantly increases upon mineralization reflecting the formation of many bisphosphonate BP-Ca2+ bonds acting as additional cross-links. Cyclic mechanical tests reveal self-recoverability of hydrogels because of reversible nature of BP-Ca2+ bonds. The results suggest that these cross-linkers can add calcium-binding abilities to hydrogels synthesized from any monomer and improve their mechanical, swelling, and mineralization properties and hence are potentially useful materials for biomedical applications., Boğaziçi University Research Fund; Turkish Academy of Sciences (TÜBA)
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- 2018
15. Anti-icing Properties on Surfaces through a Functional Composite: Effect of Ionic Salts
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M. Birgul Akolpoglu, Derya Aydın, Riza Kizilel, Seda Kizilel, Aydın, Derya, Akolpoğlu, Mükrime Birgül, Kızılel, Rıza, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Koç University Tüpraş Energy Center (KUTEM) / Koç Üniversitesi Tüpraş Enerji Merkezi (KÜTEM), College of Engineering, Graduate School of Sciences and Engineering, College of Sciences, and Department of Department of Mathematics
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chemistry.chemical_classification ,General Chemical Engineering ,Salt (chemistry) ,Ionic bonding ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Chemistry, multidisciplinary ,Article ,0104 chemical sciences ,lcsh:Chemistry ,lcsh:QD1-999 ,chemistry ,Chemical engineering ,Superhydrophobic surfaces ,Nanostructured surfaces ,Asphalt mixtures ,Anti-ice ,Performance ,Water ,Temperature ,Adhesion ,Filler ,Energy ,0210 nano-technology ,human activities ,Functional composite ,Icing - Abstract
This study reports the potential of a unique functional composite for anti-icing applications. To date, various ionic salt formulations have been applied to prevent ice accumulation on surfaces. However, salt can be removed by external factors and large amounts must be used to attain anti-icing properties. Incorporating hydrophilic salts into hydrophobic mediums and controlled release of specific agents can provide effective solution to reduce ice accumulation on surfaces. Here, we developed functional polymer composites with salt pockets of altered ionic salts consisting of potassium formate (KCOOH), sodium chloride (NaCl), or magnesium chloride (MgCl2). We dissolved ionic salts in hydrophilic gel domains and dispersed in a hydrophobic styrene-butadiene-styrene polymer matrix. Na+ and Cl- ions delayed ice formation by 42.6 min at -2 degrees C compared to that for unmodified surfaces. Functional composites prepared with the NaCl ionic salt exhibited better anti-icing behavior at -2 degrees C because of their high concentration compared to that of the composites prepared with KCOOH and MgCl2 ionic salts. We also characterized the release of ionic salts from composite-modified hydrophobic medium separately up to 118 days. Furthermore, we monitored freezing of water on composite-incorporated or composite-coated hydrophobic surfaces in a camera-integrated cold chamber with a uniform temperature (-2 degrees C). The results demonstrated significant increases in the delay of freezing on composite-incorporated or composite-coated surfaces compared to that on controls. We observed altered effects of each ionic salt on the mechanical, morphological, and functional properties of the composite-incorporated or composite-coated hydrophobic surfaces. Our results suggested that the efficiency of a polymer composite to promote anti-icing behavior on a surface is directly related to the type and concentration of the particular ionic salt incorporation into the composite. This approach is promising and demonstrates significant potential of the ionic salt embedded within polymer composite-modified hydrophobic surfaces to attain delayed icing function., GENERALI; Turkish Petroleum Refineries Corporation (TUPRAS)
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- 2018
16. Characterization of sodium tripolyphosphate and sodium citrate dehydrate residues on surfaces
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Can Erkey, Seda Kizilel, M. Sadi Gürses, and Alper Uzun
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Chemistry ,Sodium ,Inorganic chemistry ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Mass spectrometry ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,symbols.namesake ,chemistry.chemical_compound ,Attenuated total reflection ,Sodium citrate ,symbols ,Viability assay ,Fourier transform infrared spectroscopy ,0210 nano-technology ,Raman spectroscopy ,Spectroscopy ,Nuclear chemistry - Abstract
Sodium tripolyphosphate (STPP) and sodium citrate dihydrate (sodium citrate) are the most widely used components in detergent formulations. Here, we characterized these two components on glass surfaces to assess their possible exposures from white spots on dishwasher-washed dishes. Ultraviolet/visible near infrared spectroscopy (UV/Vis-NIR), Fourier transform infrared spectroscopy (FTIR) in the attenuated total reflectance mode (ATR-FTIR), Raman spectroscopy and laser ablation-inductively coupled plasma mass spectroscopy (LA-ICP-MS) were utilized to design calibration models for a range of STPP and sodium citrate concentrations 1-8% w/w) precipitated on glass surfaces. STPP and sodium citrate residues on the dishwasher-washed dishes were also determined quantitatively using ATR-FTIR by utilizing these calibration models. In addition, cytotoxicity assays were performed to elucidate the influence of STPP and sodium citrate on human embryonic kidney cell survival. Cell viability results showed a decreasing trend in the number of cells cultured with increasing concentrations and exposure time of STPP and sodium citrate in the medium. Cell survival was minimum on day four when cells were exposed to 84mg/kg of body/day of STPP and sodium citrate separately. This is the first report about detection and quantification of STTP and sodium citrate and assessment of cytotoxicity. Results of this study provide opportunities for the quantification of detergent residues on dishes and assessment of their possible toxicity on live cells.
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- 2018
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17. Multifunctional Alginate-Based Hydrogel With Reversible Crosslinking For Controlled Therapeutics Delivery
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Muhammad Anwaar Nazeer, Afsun Sahin, Duygu Ekinci, Syeda Rubab Batool, Seda Kizilel, Batool, Syeda Rubab, Nazeer, Muhammad Anwaar, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Şahin, Afsun (ORCID 0000-0002-5083-5618 & YÖK ID 171267), Ekinci, Duygu, Koç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM), Graduate School of Sciences and Engineering, College of Engineering, School of Medicine, Department of Biomedical Sciences and Engineering, and Department of Chemical and Biological Engineering
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Glycan ,Light ,Alginates ,Cell Survival ,Anthracene-functional hydrogel ,pH-responsive hydrogel ,Photodimerization ,Biocompatible Materials ,02 engineering and technology ,macromolecular substances ,Biochemistry ,Polymerization ,Biochemistry and molecular biology ,Chemistry, applied ,Polymer science ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Drug Delivery Systems ,Structural Biology ,Animals ,Humans ,Molecule ,Molecular Biology ,Cell survival ,030304 developmental biology ,Drug Carriers ,0303 health sciences ,Anthracene ,Molecular Structure ,biology ,Spectrum Analysis ,technology, industry, and agriculture ,Hydrogels ,General Medicine ,Dynamic mechanical analysis ,Hydrogen-Ion Concentration ,021001 nanoscience & nanotechnology ,Drug Liberation ,Cross-Linking Reagents ,Photopolymer ,chemistry ,Self-healing hydrogels ,biology.protein ,Biophysics ,Chemotherapeutic drugs ,Rheology ,0210 nano-technology - Abstract
Glycan-based alginate hydrogels have great potential in creating new vehicles with responsive behavior and tunable properties for biomedicine. However, precise control and tunability in properties present major barrier for clinical translation of these materials. Here, we report the synthesis of pH responsive anthracene modified glycan-based hydrogels for selective release of therapeutic molecules. Hydrogels were crosslinked through simultaneous photopolymerization of vinyl groups and photodimerization of anthracene. Incorporation of anthracene into these gels leads to reversible control on crosslinking and transition between gel/sol states through dimerization/dedimerization of anthracene groups. Chemotherapeutic drug doxorubicin-loaded hydrogels were then tested in a cancer mimetic microenvironment where 85% of the drug was released from anthracene-conjugated hydrogels at pH 2 for 6 days. Control on gelation with anthracene incorporation was observed through alterations in modulus, where storage modulus was increased two-fold with anthracene conjugation during photopolymerization and photodimerization. Furthermore, cell survival analysis revealed that anthracene conjugation could selectively compromise cancer cell viability without inducing significant toxicity on healthy fibroblasts. This study combines light-induced control of crosslink density due to anthracene and pH-triggered therapeutics delivery with alginate. The approach would be applicable for systems where multiple control is required with high precision., Scientific and Technological Research Council of Turkey (TÜBİTAK), International Support Program (COST Action - European Cooperation in Science and Technology); Koç University Seed Fund; Presidency of Turkey, Presidency of Strategy and Budget.
- Published
- 2020
18. Novel corneal crosslinking technique with eosin‐Y and visible light
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Betul Bayraktutar, Seda Kizilel, Muhammad Anwaar Nazeer, Erdost Yildiz, Noushin Zibandeh, and Afsun Sahin
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Ophthalmology ,chemistry.chemical_compound ,Materials science ,chemistry ,General Medicine ,Eosin Y ,Photochemistry ,Visible spectrum - Published
- 2019
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19. Parameters Influencing Gene Delivery Efficiency of PEGylated Chitosan Nanoparticles: Experimental and Modeling Approach
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Muhammad Anwaar Nazeer, Nihal Olcay Dogan, Alp Can Karacakol, Pelin Erkoc, Fidan Seker-Polat, Metin Sitti, Ugur Bozuyuk, Seda Kizilel, Tugba Bagci-Onder, Ahmet Cingoz, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Sitti, Metin (ORCID 0000-0001-8249-3854 & YÖK ID 297104), Önder, Tuğba Bağcı (ORCID /0000-0003-3646-2613 & YÖK ID 184359), Doğan, Nihan Olcay, Cingöz, Ahmet, Şeker Polat, Fidan, Nazeer, Muhammad Anwaar, Bozüyük, Uğur, Erkoç, Pelin, Karacakol, Alp Can, College of Engineering, School of Medicine, Department of Chemical and Biological Engineering, and Department of Mechanical Engineering
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Chemistry ,Chitosan nanoparticles ,Transfection ,Polyethylene glycol ,Gene delivery ,sodium tripolyphosphate ,PEGylated chitosan nanoparticles ,Chitosan ,chemistry.chemical_compound ,plasmid DNA ,transfection ,Plasmid dna ,Chemical engineering ,polyethylene glycol ,Medical technology ,General Earth and Planetary Sciences ,Artificial neural networks ,chitosan ,Plasmid DNA ,Sodium tripolyphosphate ,R855-855.5 ,Engineering, biomedical ,Nanoscience and nanotechnology ,Materials science ,Biomaterials ,artificial neural networks ,TP248.13-248.65 ,Biotechnology ,General Environmental Science - Abstract
Experimentation of nanomedicine is labor-intensive, time-consuming, and requires costly laboratory consumables. Constructing a reliable mathematical model for such systems is also challenging due to the difficulties in gathering a sufficient number of data points. Artificial neural networks (ANNs) are indicated as an efficient approach in nanomedicine to investigate the cause-effect relationships and predict output variables. Herein, an ANN is adapted into plasmid DNA (pDNA) encapsulated and PEGylated chitosan nanoparticles cross-linked with sodium tripolyphosphate (TPP) to investigate the effects of critical parameters on the transfection efficiencies of nanoparticles. The ANN model is developed based on experimental results with three independent input variables: 1) polyethylene glycol (PEG) molecular weight, 2) PEG concentration, and 3) nanoparticle concentration, along with one output variable as a percentage of green fluorescent protein (GFP) expression, which refers to transfection efficiency. The constructed model is further validated with the leave-p-out cross-validation method. The results indicate that the developed model has good prediction capability and is influential in capturing the transfection efficiencies of different nanoparticle groups. Overall, this study reveals that the ANN could be an efficient tool for nanoparticle-mediated gene delivery systems to investigate the impacts of critical parameters in detail with reduced experimental effort and cost., Advanced NanoBiomed Research, 2 (1), ISSN:2699-9307
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- 2021
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20. Nanogel-Integrated pH-Responsive Composite Hydrogels for Controlled Drug Delivery
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Gunce E. Cinay, Mohammad Alipour, Pelin Erkoc, Kazunari Akiyoshi, Yoshihiro Sasaki, Seda Kizilel, and Yoshihide Hashimoto
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Materials science ,technology, industry, and agriculture ,Biomedical Engineering ,Pullulan ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,complex mixtures ,01 natural sciences ,0104 chemical sciences ,Biomaterials ,chemistry.chemical_compound ,Composite hydrogels ,Photopolymer ,chemistry ,Chemical engineering ,Controlled delivery ,Self-healing hydrogels ,Polymer chemistry ,Drug delivery ,medicine ,Swelling ,medicine.symptom ,0210 nano-technology ,Nanogel - Abstract
A novel pH-sensitive hydrogel system consisting of poly(methacrylic acid-g-ethylene glycol) (P(MAA-g-EG)) and acryloyl group modified-cholesterol-bearing pullulan (CHPOA) nanogels was developed for the controlled delivery of an anticonvulsant drug, pregabalin (PGB). Here, the hydrophilic hydrogel network provides the pH-sensitive swelling behavior, whereas nanogel components form separate reservoirs for the delivery of drugs with different hydrophobicities. These nanocarrier-integrated hybrid gels were synthesized through both surface-initiated and bulk photopolymerization approaches. The swelling and drug release behavior of these pH-responsive hydrogels synthesized by different photopolymerization approaches at visible and UV light wavelenghts were studied at acidic and basic pH values. Nanogel-integrated hydrogels exhibited higher swelling behavior compared to plain hydrogels in reversible swelling experiments. Similarly, the presence of nanogels in hydrogel network enhanced the loading and release per...
- Published
- 2017
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21. Targeting cancer cells via tumor-homing peptide CREKA functional PEG nanoparticles
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Pelin Erkoc, Aysu Ceren Okur, and Seda Kizilel
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0301 basic medicine ,media_common.quotation_subject ,Nanoparticle ,Peptide ,02 engineering and technology ,Conjugated system ,Polyethylene Glycols ,03 medical and health sciences ,Drug Delivery Systems ,Colloid and Surface Chemistry ,PEG ratio ,medicine ,Humans ,Doxorubicin ,Physical and Theoretical Chemistry ,Internalization ,Cell Proliferation ,media_common ,chemistry.chemical_classification ,Antibiotics, Antineoplastic ,Cell growth ,Surfaces and Interfaces ,General Medicine ,021001 nanoscience & nanotechnology ,Molecular biology ,030104 developmental biology ,chemistry ,Cancer cell ,Biophysics ,Nanoparticles ,0210 nano-technology ,Oligopeptides ,HeLa Cells ,Biotechnology ,medicine.drug - Abstract
Targeting cell microenvironment via nano-particle based therapies holds great promise for the treatment of various diseases. One of the main challenges in targeted delivery of nanoparticles for cancer therapy is the reduced localization of delivery vehicles to the tumor site. The therapeutic efficacy of drugs can be improved by recruiting delivery vehicles towards specific region of tumorigenesis in the body. Here, we demonstrate an effective approach in creating PEG particles via water-in-water emulsion technique with a tumor-homing peptide CREKA functionalization. The CREKA conjugated hydrogel nanoparticles were found to be more effective at inducing Doxorubicin (DOX)-mediated apoptosis compared to that of particles conjugated with laminin peptide IKVAV. Fluorescence intensity analysis on confocal micrographs suggested significantly higher cellular uptake of CREKA conjugated PEG particles than internalization of nanoparticles in other groups. We observed that fibrin binding ability of PEG particles could be increased up to 94% through CREKA conjugation. Our results suggest the possibility of cancer cell targeting via CREKA-functional PEG nanoparticles.
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- 2016
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22. Water-in-Water Emulsion Based Synthesis of Hydrogel Nanospheres with Tunable Release Kinetics
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Seda Kizilel and Derya Aydın
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Materials science ,Biocompatibility ,technology, industry, and agriculture ,General Engineering ,Water-in-water emulsion ,macromolecular substances ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Dynamic light scattering ,Chemical engineering ,chemistry ,Polymer chemistry ,Emulsion ,Drug delivery ,PEG ratio ,General Materials Science ,0210 nano-technology ,Prepolymer ,Ethylene glycol - Abstract
Poly(ethylene glycol) (PEG) micro/nanospheres have several unique advantages as polymer based drug delivery systems (DDS) such as tunable size, large surface area to volume ratio, and colloidal stability. Emulsification is one of the widely used methods for facile synthesis of micro/nanospheres. Two-phase aqueous system based on polymer–polymer immiscibility is a novel approach for preparation of water-in-water (w/w) emulsions. This method is promising for the synthesis of PEG micro/nanospheres for biological systems, since the emulsion is aqueous and do not require organic solvents or surfactants. Here, we report the synthesis of nano-scale PEG hydrogel particles using w/w emulsions using phase separation of dextran and PEG prepolymer. Dynamic light scattering (DLS) and scaning electron microscopy (SEM) results demonstrated that nano-scale hydrogel spheres could be obtained with this approach. We investigated the release kinetics of a model drug, pregabalin (PGB) from PEG nanospheres and demonstrated the influence of polymerization conditions on loading and release of the drug as well as the morphology and size distribution of PEG nanospheres. The experimental drug release data was fitted to a stretched exponential function which suggested high correlation with experimental results to predict half-time and drug release rates from the model equation. The biocompatibility of nanospheres on human dermal fibroblasts using cell-survival assay suggested that PEG nanospheres with altered concentrations are non-toxic, and can be considered for controlled drug/molecule delivery.
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- 2016
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23. 3D Printing of Cytocompatible Gelatin‐Cellulose‐Alginate Blend Hydrogels
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Ileyna Uvak, Syeda Rubab Batool, Pelin Erkoc, Seda Kizilel, Yazan Nitham Odeh, Ozan Akdogan, and Muhammad Anwaar Nazeer
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Materials science ,food.ingredient ,Polymers and Plastics ,Alginates ,Cell Survival ,Swine ,Bioengineering ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Gelatin ,law.invention ,Biomaterials ,Mice ,chemistry.chemical_compound ,food ,law ,Materials Chemistry ,medicine ,Animals ,Cellulose ,Porosity ,3D bioprinting ,Hydrogels ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Chemical engineering ,chemistry ,Printing, Three-Dimensional ,Self-healing hydrogels ,NIH 3T3 Cells ,Extrusion ,Glutaraldehyde ,Swelling ,medicine.symptom ,Rheology ,0210 nano-technology ,Biotechnology - Abstract
3D bioprinting of hydrogels has gained great attention due to its potential to manufacture intricate and customized scaffolds that provide favored conditions for cell proliferation. Nevertheless, plain natural hydrogels can be easily disintegrated, and their mechanical strengths are usually insufficient for printing process. Hence, composite hydrogels are developed for 3D printing. This study aims to develop a hydrogel ink for extrusion-based 3D printing which is entirely composed of natural polymers, gelatin, alginate, and cellulose. Physicochemical interactions between the components of the intertwined gelatin-cellulose-alginate network are studied via altering copolymer ratios. The structure of the materials and porosity are assessed using infrared spectroscopy, swelling, and degradation experiments. The utility of this approach is examined with two different crosslinking strategies using glutaraldehyde or CaCl2 . Multilayer cylindrical structures are successfully 3D printed, and their porous structure is confirmed by scanning electron microscopy and Brunauer-Emmett-Teller surface area analyses. Moreover, cytocompatibility of the hydrogel scaffolds is confirmed on fibroblast cells. The developed material is completely natural, biocompatible, economical, and the method is facile. Thus, this study is important for the development of advanced functional 3D hydrogels that have considerable potential for biomedical devices and artificial tissues.
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- 2020
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24. High‐Yield Production of Biohybrid Microalgae for On‐Demand Cargo Delivery
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Mukrime Birgul Akolpoglu, Metin Sitti, Seda Kizilel, Ugur Bozuyuk, Hakan Ceylan, Nihal Olcay Dogan, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Doğan, Nihal Olcay, Sitti, Metin (ORCID 0000-0001-8249-3854 & YÖK ID 297104), Akolpoğlu, Mukrime Birgul, Bozüyük, Uğur, Ceylan, Hakan, College of Engineering, Graduate School of Sciences and Engineering, School of Medicine, Department of Chemical and Biological Engineering, and Department of Mechanical Engineering
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Materials science ,General Chemical Engineering ,General Physics and Astronomy ,Medicine (miscellaneous) ,Nanoparticle ,Chlamydomonas reinhardtii ,Nanotechnology ,02 engineering and technology ,engineering.material ,010402 general chemistry ,01 natural sciences ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Chitosan ,biohybrids ,chemistry.chemical_compound ,Coating ,General Materials Science ,Microrobots ,Biohybrids ,Microswimmers ,Microalgae ,Drug delivery ,Light-triggered drug release ,lcsh:Science ,biology ,Communication ,microalgae ,General Engineering ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Communications ,0104 chemical sciences ,Surface coating ,chemistry ,Yield (chemistry) ,drug delivery ,light‐triggered drug release ,engineering ,lcsh:Q ,chitosan ,0210 nano-technology ,microrobots ,Layer (electronics) ,Chemistry, multidisciplinary ,Nanoscience and nanotechnology ,Materials science, multidisciplinary ,microswimmers - Abstract
Biohybrid microswimmers exploit the swimming and navigation of a motile microorganism to target and deliver cargo molecules in a wide range of biomedical applications. Medical biohybrid microswimmers suffer from low manufacturing yields, which would significantly limit their potential applications. In the present study, a biohybrid design strategy is reported, where a thin and soft uniform coating layer is noncovalently assembled around a motile microorganism.Chlamydomonas reinhardtii(a single-cell green alga) is used in the design as a biological model microorganism along with polymer-nanoparticle matrix as the synthetic component, reaching a manufacturing efficiency of approximate to 90%. Natural biopolymer chitosan is used as a binder to efficiently coat the cell wall of the microalgae with nanoparticles. The soft surface coating does not impair the viability and phototactic ability of the microalgae, and allows further engineering to accommodate biomedical cargo molecules. Furthermore, by conjugating the nanoparticles embedded in the thin coating with chemotherapeutic doxorubicin by a photocleavable linker, on-demand delivery of drugs to tumor cells is reported as a proof-of-concept biomedical demonstration. The high-throughput strategy can pave the way for the next-generation generation microrobotic swarms for future medical active cargo delivery tasks., Koç University Seed Fund; Max Planck Society; Koç University Visiting Scholar Program
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- 2020
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25. Nanoengineered biomaterials for pancreas regeneration
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Seda Kizilel, Dilem Ceren Oran, and Ipek Simay Gokulu
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Extracellular matrix ,medicine.anatomical_structure ,Chemistry ,Pancreatic islets ,Pancreatic cancer ,Regeneration (biology) ,Pancreas regeneration ,medicine ,Context (language use) ,Beta cell ,Pancreas ,medicine.disease ,Cell biology - Abstract
The therapeutic virtues of biomaterials offer a variety of regenerative solutions for the repair of damaged or lost tissues and organs along with some alternative imaging methods. Scaffolds at the nanometer scale such as nanoparticles, nanofibers, and nanocomposites are promising in biomedical and clinical applications. For example, pancreatic regeneration has been commonly considered for the treatment of diabetes mellitus, pancreatic cancer, and pancreatic dysfunction. Nanostructured materials act as 3D scaffolds, and these platforms can mimic the physiological characteristics of natural extracellular matrix of the pancreas to facilitate the anabolic activities of pancreatic islets via beta cell regulation, differentiation, and proliferation within the pancreas microenvironment. Furthermore, these nanostructures have shown to engage in regenerative exercises through the enhancement of the signaling attributes of some growth factors and proteins surrounding the native islets. In this chapter, we review the current status of nanostructured biomaterials and the methodology of their applications within the context of pancreatic regeneration.
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- 2019
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26. Biosensing–Drug Delivery Systems for In Vivo Applications
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Ugur Bozuyuk, Seda Kizilel, Pelin Erkoc, and M. Birgul Akolpoglu
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Computer science ,Payload ,Integrated systems ,Drug delivery ,technology, industry, and agriculture ,Early detection ,Nanotechnology ,Biosensor - Abstract
Early detection of diseases can increase the efficiency of therapies. Recent advances in biosensor technology have led to the development of accurate and robust systems that can sense disease-dependent changes in analyte. These advancements have enabled faster diagnosis and treatment for various diseases. The invention of smart-responsive materials has opened new gates for next-generation biosensors, which can release the therapeutic payload upon environmental changes. These integrated systems provide increased therapeutic efficacy with reduced side effects, and a better perspective for biomedical applications. With further efforts, including comprehensive research and computational modeling, biosensing–drug delivery systems may become powerful tools for the treatment of chronic diseases.
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- 2019
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27. Contributors
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Ehsaneh Daghigh Ahmadi, Mohsen Akbari, J. Anjana, R.C. Assunção-Silva, Smaranda Badea, Francesco Baino, Jyh-Ping Chen, Yahya E. Choonara, Hamid Reza Davari, S. Deepthi, Alireza Dolatshahi-Pirouz, Lisa C. du Toit, Brent Godau, Ipek Simay Gokulu, E.D. Gomes, Jordi Gracia-Sancho, R. Jayakumar, Mohammad Taghi Joghataie, David L. Kaplan, Saeid Kargozar, Lucas Karperien, Zohaib Khurshid, Seda Kizilel, Pradeep Kumar, Amy C.Y. Lo, Surya K. Mallapragada, Najiba Mammadova, Peiman Brouki Milan, Zoha Salehi Moghadam, Ullas Mony, Khosrow Mottaghy, Masoud Mozafari, Sina Moztarzadeh, Shariq Najeeb, Ali Navaei, Tina Navaei, Mehdi Nikkhah, Dilem Ceren Oran, Martí Ortega-Ribera, Bhavika B. Patel, Viness Pillay, Priyamvada Pradeep, Maryam Rahmati, Tehmeena Israr Raja, Jayakumar Rajadas, Mohammad Reza Saeb, Donald S. Sakaguchi, Sahar Salehi, A.J. Salgado, Ali Samadikuchaksaraei, Elizabeth J. Sandquist, Thomas Scheibel, Farshid Sefat, K.T. Shalumon, Anup D. Sharma, N.A. Silva, Bernhard B. Singer, Tara Tariverdian, Ken K. Tsang, Aleksandra M. Urbanska, Metin Uz, Rosa Villa, Vanessa J. Wicklein, Francisca S.Y. Wong, Wutian Wu, Jose Yeste, Safiyya Yousaf, Muhammad Sohail Zafar, Payam Zarintaj, and Sana Zohaib
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- 2019
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28. A Novel Method For Pegylation Of Chitosan Nanoparticles Through Photopolymerization
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Ipek Simay Gokulu, Seda Kizilel, Nihal Olcay Dogan, and Ugur Bozuyuk
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Acrylate ,Chemistry ,General Chemical Engineering ,technology, industry, and agriculture ,Nanoparticle ,02 engineering and technology ,General Chemistry ,Chitosan nanoparticles ,macromolecular substances ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,carbohydrates (lipids) ,Colloid ,Chain length ,chemistry.chemical_compound ,Photopolymer ,Chemical engineering ,PEG ratio ,PEGylation ,0210 nano-technology - Abstract
An ultrafast and convenient method for PEGylation of chitosan nanoparticles has been established through a photopolymerization reaction between the acrylate groups of PEG and methacrylated-chitosan nanoparticles. The nanoparticle characteristics under physiological pH conditions were optimized through altered PEG chain length, concentration and duration of UV exposure. The method developed here has potential for clinical translation of chitosan nanoparticles. It also allows for the scalable and fast synthesis of nanoparticles with colloidal stability.
- Published
- 2019
29. List of Contributors
- Author
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Khairunisak Abdul Razak, M. Birgul Akolpoglu, Andrea Bernat, Ugur Bozuyuk, Jiping Chen, Rajasekhar Chokkareddy, Cecilia Cristea, Laura Cubillana-Aguilera, null Dhanjai, Abhijeet Dhiman, Pelin Erkoc, Anca Florea, Fanding Gao, Juan José García-Guzmán, Nan Hao, Oana Hosu, Rong Hua, Rajeev Jain, Srinivasulu Kanaparthi, Suvardhan Kanchi, Seda Kizilel, Alok Kumar, Amit Kumar, Sudesh Kumar, Cecilia Lete, David López-Iglesias, Jinwen Lu, Stelian Lupu, Madhu Malinee, Mariana Marin, Samuel M. Mugo, S. Naveen, Georgia-Paraskevi Nikoleli, Dimitrios P. Nikolelis, Marianna-Thalia Nikolelis, Rahmah Noordin, José María Palacios-Santander, AC Pereira, null Pratibha, Kakarla Raghava Reddy, LR Rodrigues, Veera Sadhu, MGF Sales, Robert Sandulescu, Tarun Kumar Sharma, Prashant Singh, Shiv Govind Singh, Supriya Singh, Ankita Sinha, Christina G. Siontorou, Patta Supraja, Surendra Thakur, Niranjan Thondavada, Kun Wang, Mohammad Lukman Yahaya, Huimin Zhao, and Wei-Wei Zhao
- Published
- 2019
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30. Engineering Human Stellate Cells For Beta Cell Replacement Therapy Promotes In Vivo Recruitment Of Regulatory T Cells
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Fusun Can, Tugba Bal, Yasemin Inceoglu, Mukrime Birgul Akolpoglu, Tugba Bagci-Onder, Dilem Ceren Oran, Seda Kizilel, Metin Kurtoglu, O. Albayrak, Mert Erkan, Tolga Lokumcu, Oran, Dilem Ceren, Lokumcu, Tolga, Bal, Tuǧba, İnceoğlu, Yasemin, Albayrak, Özgür, Erkan, Mert M., Kurtoglu, Metin, Can, Füsun (ORCID 0000-0001-9387-2526 & YÖK ID 103165), Önder, Tuğba Bağcı (ORCID 0000-0003-3646-2613 & YÖK ID 184359), Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), Akolpoğlu, Mükrime Birgül, Koç University Research Center for Translational Medicine (KUTTAM) / Koç Üniversitesi Translasyonel Tıp Araştırma Merkezi (KUTTAM), Graduate School of Sciences and Engineering, Graduate School of Health Sciences, College of Engineering, School of Medicine, Department of Biomedical Sciences and Engineering, and Department of Chemical and Biological Engineering
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Chemokine ,endocrine system ,Regulatory T cell ,Biomedical Engineering ,Bioengineering ,Immune tolerance ,Biomaterials ,Immune system ,medicine ,Molecular Biology ,Immunologic Tolerance ,lcsh:QH301-705.5 ,lcsh:R5-920 ,biology ,business.industry ,Biomedical sciences ,Cell Biology ,Transplantation ,medicine.anatomical_structure ,lcsh:Biology (General) ,Hepatic stellate cell ,biology.protein ,Cancer research ,CCL22 ,Immune engineering ,Islet transplantation ,Regulatory T cells ,Stellate cells ,Beta cell ,business ,lcsh:Medicine (General) ,Biotechnology - Abstract
Type 1 diabetes (T1D) is an autoimmune disease characterized by destruction of pancreatic β cells. One of the promising therapeutic approaches in T1D is the transplantation of islets; however, it has serious limitations. To address these limitations, immunotherapeutic strategies have focused on restoring immunologic tolerance, preventing transplanted cell destruction by patients’ own immune system. Macrophage-derived chemokines such as chemokine-ligand-22 (CCL22) can be utilized for regulatory T cell (Treg) recruitment and graft tolerance. Stellate cells (SCs) have various immunomodulatory functions: recruitment of Tregs and induction of T-cell apoptosis. Here, we designed a unique immune-privileged microenvironment around implantable islets through overexpression of CCL22 proteins by SCs. We prepared pseudoislets with insulin-secreting mouse insulinoma-6 (MIN6) cells and human SCs as a model to mimic naive islet morphology. Our results demonstrated that transduced SCs can secrete CCL22 and recruit Tregs toward the implantation site in vivo. This study is promising to provide a fundamental understanding of SC-islet interaction and ligand synthesis and transport from SCs at the graft site for ensuring local immune tolerance. Our results also establish a new paradigm for creating tolerable grafts for other chronic diseases such as diabetes, anemia, and central nervous system (CNS) diseases, and advance the science of graft tolerance., Scientific and Technological Research Council of Turkey (TÜBİTAK)
- Published
- 2019
31. Light-Triggered Drug Release from 3D-Printed Magnetic Chitosan Microswimmers
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I. Ceren Yasa, Metin Sitti, Ugur Bozuyuk, Seda Kizilel, Hakan Ceylan, and Oncay Yasa
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3d printed ,Materials science ,Light ,General Physics and Astronomy ,Nanotechnology ,Antineoplastic Agents ,Biocompatible Materials ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Nanomaterials ,Polymerization ,Chitosan ,chemistry.chemical_compound ,Cell Line, Tumor ,Humans ,General Materials Science ,Magnetite Nanoparticles ,chemistry.chemical_classification ,Acrylamides ,Drug Carriers ,Nanocomposite ,General Engineering ,Polymer ,021001 nanoscience & nanotechnology ,Photochemical Processes ,0104 chemical sciences ,Drug Liberation ,Magnetic Fields ,chemistry ,Doxorubicin ,Drug delivery ,Magnetic polymer ,Printing, Three-Dimensional ,Drug release ,0210 nano-technology - Abstract
Advances in design and fabrication of functional micro/nanomaterials have sparked growing interest in creating new mobile microswimmers for various healthcare applications, including local drug and other cargo (e.g., gene, stem cell, and imaging agent) delivery. Such microswimmer-based cargo delivery is typically passive by diffusion of the cargo material from the swimmer body; however, controlled active release of the cargo material is essential for on-demand, precise, and effective delivery. Here, we propose a magnetically powered, double-helical microswimmer of 6 pm diameter and 20 pm length that can on-demand actively release a chemotherapeutic drug, doxorubicin, using an external light stimulus. We fabricate the microswimmers by two-photon-based 3D printing of a natural polymer derivative of chitosan in the form of a magnetic polymer nanocomposite. Amino groups presented on the microswimmers are modified with doxorubicin by means of a photocleavable linker. Chitosan imparts the microswimmers with biocompatibility and biodegradability for use in a biological setting. Controlled steerability of the microswimmers is shown under a 10 mT rotating magnetic field. With light induction at 365 nm wavelength and 3.4 X 10(-1) W/cm(2) intensity, 60% of doxorubicin is released from the microswimmers within 5 min. Drug release is ceased by controlled patterns of light induction, so as to adjust the desired release doses in the temporal domain. Under physiologically relevant conditions, substantial degradation of the microswimmers is shown in 204 h to nontoxic degradation products. This study presents the combination of light-triggered drug delivery with magnetically powered microswimmer mobility. This approach could be extended to similar systems where multiple control schemes are needed for on-demand medical tasks with high precision and efficiency.
- Published
- 2018
32. Gelation-Stabilized Functional Composite-Modified Bitumen for Anti-icing Purposes
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Seda Kizilel, Ramazan Oguz Caniaz, Riza Kizilel, and Derya Aydın
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chemistry.chemical_classification ,Materials science ,General Chemical Engineering ,Ionic bonding ,Salt (chemistry) ,General Chemistry ,Polymer ,Controlled release ,Industrial and Manufacturing Engineering ,Potassium formate ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,Asphalt ,Organic chemistry ,Molecule ,Icing - Abstract
Ionic salts as anti-icing agents have been extensively used to eliminate accumulation of ice on asphalt surfaces. However, salt can be easily removed by rain or automobiles and requires frequent application on roads. Besides this economic consideration, anti-icing agents compromise the mechanical properties of asphalt and have a negative impact on living organisms and the environment when used in large amounts. Incorporation of hydrophilic salts into bitumen, a hydrophobic asphalt binder, and controlled release of specific molecules from this hydrophobic medium can provide an effective solution for reducing ice formation on pavements. Bitumen has previously been modified by various polymers, including styrene-butadiene-styrene (SBS) for improved strength and thermomechanical properties. However, an anti-icing function was not considered in those previous designs. In a previous study, we developed a functional polymer composite consisting of potassium formate (HCOOK) salt pockets dissolved in a hydrophilic...
- Published
- 2015
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33. Sequential Coating of Insulin Secreting Beta Cells within Multilayers of Polysaccharide Nanogels
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Tugba Bal, Dilem Ceren Oran, Yoshihiro Sasaki, Kazunari Akiyoshi, and Seda Kizilel
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0301 basic medicine ,Polymers and Plastics ,medicine.medical_treatment ,Bioengineering ,02 engineering and technology ,engineering.material ,Cell Line ,Biomaterials ,03 medical and health sciences ,chemistry.chemical_compound ,Coating ,Insulin-Secreting Cells ,Materials Chemistry ,medicine ,Humans ,Insulin ,Beta (finance) ,Glucans ,geography ,geography.geographical_feature_category ,Chemistry ,Pullulan ,Cells, Immobilized ,021001 nanoscience & nanotechnology ,Islet ,3. Good health ,Transplantation ,030104 developmental biology ,Cholesterol ,engineering ,Biophysics ,Pancreatic islet transplantation ,Beta cell ,0210 nano-technology ,Gels ,Biotechnology - Abstract
Pancreatic islet transplantation has emerged as a promising treatment for type-1 diabetes (T1D); however, its clinical application is still limited by the life-long use of immunosuppressive drugs, insufficient number of islets to achieve normoglycemia, and large transplantation volume. This paper reports a unique approach for nanothin coating of insulin secreting beta cell aggregates. The coating is based on hydrophobic and covalent interactions between natural acrylate modified cholesterol bearing pullulan (CHPOA) nanogels and MIN6 beta cell aggregates. Beta cell aggregates are prepared as spheroids through hanging drop method, which is optimized with respect to hanging drop volume and initial number of beta cells. These aggregates, defined as pseudoislets, are coated with sequential layers of nanogels and are evaluated as viable and functional for insulin secretion. Coating experiments are carried out using physiologically compatible medium, where pseudoislets are not brought in contact with toxic prepolymer solutions used in existing approaches. This study offers new opportunities through coating of islets with advanced functional materials under completely physiological conditions for clinical translation of cell transplantation technology. The technique developed here will establish a new paradigm for creating tolerable grafts for other chronic diseases such as anemia, cancer, central nervous system (CNS) diseases.
- Published
- 2018
34. Deep Insight Into Pegylation Of Bioadhesive Chitosan Nanoparticles: Sensitivity Study For The Key Parameters Through Artificial Neural Network Model
- Author
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Seda Kizilel, Ugur Bozuyuk, and Nihal Olcay Dogan
- Subjects
Materials science ,Bioadhesive ,Models, Neurological ,Nanoparticle ,02 engineering and technology ,macromolecular substances ,010402 general chemistry ,01 natural sciences ,Polyethylene Glycols ,Chitosan ,chemistry.chemical_compound ,PEG ratio ,Zeta potential ,Humans ,General Materials Science ,Solubility ,technology, industry, and agriculture ,021001 nanoscience & nanotechnology ,equipment and supplies ,0104 chemical sciences ,carbohydrates (lipids) ,HEK293 Cells ,chemistry ,Chemical engineering ,PEGylation ,Nanoparticles ,Nanomedicine ,Nerve Net ,0210 nano-technology - Abstract
lonically cross-linked chitosan nanoparticles have great potential in nanomedicine due to their tunable properties and cationic nature. However, low solubility of chitosan severely limits their potential clinical translation. PEGylation is a well-known method to increase solubility of chitosan and chitosan nanoparticles in neutral media; however, effect of PEG chain length and chitosan/PEG ratio on particle size and zeta potential of nanoparticles are not known. This study presents a systematic analysis of the effect of PEG chain length and chitosan/PEG ratio on size and zeta potential of nanoparticles. We prepared PEGylated chitosan chains prior to the nanoparticle synthesis with different PEG chain lengths and chitosan/PEG ratios. To precisely estimate the influence of critical parameters on size and zeta potential of nanoparticles, we both developed an artificial neural network (ANN) model and performed experimental characterization using the three independent input variables: (i) PEG chain length, (ii) chitosan/PEG ratio, and (iii) pH of solution. We studied the influence of PEG chain lengths of 2, 5, and 10 kDa and three different chitosan/PEG ratios (25 mg chitosan to 4, 12, and 20 mu moles of PEG) for the synthesis of chitosan nanoparticles within the pH range of 6.0-7.4. Artificial neural networks is a modeling tool used in nanomedicine to optimize and estimate inherent properties of the system. Inherent properties of a nanoparticle system such as size and zeta potential can be estimated based on previous experiment results, thus, nanoparticles with desired properties can be obtained using an ANN. With the ANN model, we were able to predict the size and zeta potential of nanoparticles under different experimental conditions and further confirmed the cell-nanoparticle adhesion behavior through experiments. Nanoparticle groups that had higher zeta potentials promoted adhesion of HEK293-T cells to nanoparticle-coated surfaces in cell culture medium, which was predicted through ANN model prior to experiments. Overall, this study comprehensively presents the PEGylation of chitosan, synthesis of PEGylated chitosan nanoparticles, utilizes ANN model as a tool to predict important properties such as size and zeta potential, and further captures the adhesion behavior of cells on surfaces prepared with these engineered nanoparticles.
- Published
- 2018
35. P2X7 receptor antagonist delivery vehicle based on photocrosslinked amphiphilic hybrid gels
- Author
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Seda Kizilel, Derya Aydın, Aydın, Derya, Kızılel, Seda (ORCID 0000-0001-9092-2698 & YÖK ID 28376), College of Engineering, Graduate School of Sciences and Engineering, and Department of Chemical and Biological Engineering
- Subjects
chemistry.chemical_classification ,General Chemical Engineering ,Antagonist ,02 engineering and technology ,General Chemistry ,Polymer ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Chemistry, multidisciplinary ,0104 chemical sciences ,Contact angle ,chemistry.chemical_compound ,chemistry ,Amphiphile ,PEG ratio ,Biophysics ,Molecule ,0210 nano-technology ,Luminescence ,Ethylene glycol ,Elastic-modulus ,Indentation - Abstract
We report here a method for the synthesis of a unique hybrid gel system for the sustained delivery of P2X7 receptor (P2X7R) antagonist. P2X7R has been reported as a key mediator in inflammatory processes and controlled delivery of this molecule would be critical for the treatment of inflammatory arthritis. The hybrid gel designed here for the sustained delivery of P2X7R antagonists is based on crosslinked hydrophobic styrene-butadiene-styrene (SBS) polymer as a continuous network, where hydrogel particles prepared with hydrophilic poly(ethylene glycol) (PEG) were embedded into this system. PEG hydrogel particle-incorporated SBS gels were characterized through electron microscopy, water contact angle observations, and strong mechanical properties were confirmed through nanoindentation measurements. The release of P2X7R antagonist from these hybrid hydrogel-elastomer system demonstrated a sustained drug release profile up to 28 days at physiological pH, which was not observed in earlier reports. We obtained drug release percentages ranging from 49.72% to 93.04% which indicated the tunability of release through SBS crosslinking and hydrophilic/hydrophobic nature of SBS. This tunability is significant to achieve simultaneous improvements in drug efficacy with reduced side effects. CellTiter-Glo luminescence measurements using human kidney cells revealed that these networks are non-toxic and highly biocompatible with percent cell viabilities of higher than 85%. The approach presented here with crosslinked, amphiphilic and elastic SBS gel systems is not only promising for extended release of P2X7R antagonist but could also allow for incorporation of different molecules so that simultaneous/sequential and extended release profiles for therapeutic molecules could be achieved., GENERALI; Koç University Seed Fund Program
- Published
- 2018
36. Gelatin Methacryloyl Hydrogels in the Absence of a Crosslinker as 3D Glioblastoma Multiforme (GBM)-Mimetic Microenvironment
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Fidan Seker, Tugba Bagci-Onder, Seda Kizilel, and Pelin Erkoc
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0301 basic medicine ,food.ingredient ,Polymers and Plastics ,Bioengineering ,02 engineering and technology ,Gelatin ,Biomaterials ,03 medical and health sciences ,food ,Downregulation and upregulation ,Biomimetics ,Puma ,Cell Line, Tumor ,Materials Chemistry ,medicine ,Tumor Microenvironment ,Humans ,Viability assay ,biology ,Chemistry ,Brain Neoplasms ,Cancer ,Hydrogels ,021001 nanoscience & nanotechnology ,biology.organism_classification ,medicine.disease ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,Tumor progression ,Cancer cell ,Self-healing hydrogels ,Cancer research ,Methacrylates ,0210 nano-technology ,Glioblastoma ,Biotechnology - Abstract
3D platforms are important for monitoring tumor progression and screening drug candidates to eradicate tumors such as glioblastoma multiforme (GBM), a malignant type of human brain tumor. Here, a new strategy is reported that exploits visible-light-induced crosslinking of gelatin where the reaction is carried out in the absence of an additional crosslinker. Visible light-induced crosslinking promotes the design of cancer microenvironment-mimetic system without compromising the cell viability during the process and absence of crosslinker facilitates the synthesis of the unique construct. Suspension and spheroid-based models of GBM are used to investigate cellular behavior, expression profiles of malignancy, and apoptosis-related genes within this unique network. Furthermore, sensitivity to an anticancer drug, Digitoxigenin, treatment is investigated in detail. The data suggest that U373 cells, in sparse or spheroid form, have significantly decreased expressions of apoptosis-activating genes, Bad, Puma, and Caspase-3, and a high expression of prosurvival Bcl-2 gene within GelMA hydrogels. Matrix-metalloproteinase genes are also upregulated within GelMA, suggesting positive contribution of gels on extracellular remodeling of cancer cells. This unique photocurable gelatin holds great potential for clinical translation of cancer research through the analysis of 3D malignant cancer cell behavior, and hence for more efficient treatment methods for GBM.
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- 2017
37. Design of Stimuli-Responsive Drug Delivery Hydrogels: Synthesis and Applications
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Derya Aydin, Mohammad Alipour, and Seda Kizilel
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- 2017
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38. Functional Hydrogels in Drug Delivery
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Ankit Jain, Madhusudana Rao K, Ibrahim El-Sherbiny, Sabyasachi Maiti, Mohammed Sedki, Anamika Sahu, Maria Valentina Dinu, SEDA KIZILEL, Patel Gayatri, Natasa Skalko-Basnet, MOHAMMAD ALIPOUR, Arvind Gulbake, Giuseppe Cirillo, Piotr Lulinski, and José Carmelo Encinas
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Chemistry ,Self-healing hydrogels ,Drug delivery ,Nanotechnology ,Key features ,Biomedical engineering - Published
- 2017
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39. Design of Stimuli-Responsive Drug Delivery Hydrogels
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Mohammad Alipour, Derya Aydın, and Seda Kizilel
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Stimuli responsive ,Chemistry ,Drug delivery ,Self-healing hydrogels ,Biomedical engineering - Published
- 2017
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40. An all-aqueous approach for physical immobilization of PEG-lipid microgels on organoid surfaces
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Yasemin Inceoglu, Seda Kizilel, and M. Birgul Akolpoglu
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Biocompatibility ,Surface Properties ,Sonication ,Water-in-water emulsion ,02 engineering and technology ,01 natural sciences ,Polyethylene Glycols ,Hydrophobic effect ,Colloid and Surface Chemistry ,0103 physical sciences ,PEG ratio ,Particle Size ,Physical and Theoretical Chemistry ,Microgels ,Aqueous solution ,010304 chemical physics ,Chemistry ,Water ,Surfaces and Interfaces ,General Medicine ,021001 nanoscience & nanotechnology ,Lipids ,Organoids ,Chemical engineering ,Drug delivery ,Emulsion ,0210 nano-technology ,Biotechnology - Abstract
Emulsion-based generation of hydrogel particles has been widely explored for numerous applications in fields such as biomedical, food, and drug delivery. Water-in-water emulsion (w/w) is an organic solvent-free approach and exploits solely aqueous media to generate nano- or microparticles. This strategy is environment-friendly and favorable for biomedical applications where biocompatibility is the ultimate criterion. Hence, PEG-based microgels can be synthesized with desired size and functionality using w/w emulsion technique. To estimate the influence of emulsification parameters on size and stability of PEG-lipid microgels, optimizations using three independent input variables were carried out: (i) ultrasonication power, (ii) ultrasonication duration, and (iii) duration of light exposure. Physical immobilization of microgels on islet-organoids was achieved through hydrophobic interactions. Cell function and viability were assessed thoroughly after microgel immobilization. Microgel size is dependent on ultrasonication parameters and microgel stability is vastly determined by the duration of light exposure. Immobilization of microgels with 5 mM lipid moiety promoted coating of islet-organoids. Coated organoids retained their function and viability without significant adverse effects. This is important for understanding fundamental aspects of PEG-lipid microgels using w/w emulsion, useful for possible drug/gene delivery applications to increase treatment efficiency and ultimately lead to clinical translation of PEG microgels for biomedical applications.
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- 2020
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41. Design of Bioartificial Pancreas with Functional Micro/Nano-Based Encapsulation of Islets
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Tugba Bal, Burcu Kepsutlu, Caner Nazli, and Seda Kizilel
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Pancreas, Artificial ,endocrine system ,medicine.medical_specialty ,endocrine system diseases ,Islets of Langerhans Transplantation ,Pharmaceutical Science ,In vivo ,Internal medicine ,medicine ,Animals ,Humans ,Hypoglycemic Agents ,Insulin ,Nanotechnology ,geography ,geography.geographical_feature_category ,Bioartificial pancreas ,Bioartificial Organs ,business.industry ,Type i diabetes mellitus ,Pancreatic islets ,Islet ,Transplantation ,Diabetes Mellitus, Type 1 ,Endocrinology ,medicine.anatomical_structure ,Micro nano ,Cancer research ,business ,Biotechnology - Abstract
Type I diabetes mellitus (TIDM), a devastating health issue in all over the world, has been treated by successful transplantation of insulin secreting pancreatic islets. However, serious limitations such as the requirement of immunosuppressive drugs for recipient patients, side effects as a result of long-term use of drugs, and reduced functionality of islets at the transplantation site remain. Bioartificial pancreas that includes islets encapsulated within semi-permeable membrane has been considered as a promising approach to address these requirements. Many studies have focused on micro or nano-based islet immunoisolation systems and tested the efficacy of encapsulated islets using in vitro and in vivo platforms. In this review, we address current progress and obstacles for the development of a bioartificial pancreas using micro/nano-based systems for encapsulation of islets.
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- 2014
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42. Improved Coating of Pancreatic Islets With Regulatory T cells to Create Local Immunosuppression by Using the Biotin-polyethylene Glycol-succinimidyl Valeric Acid Ester Molecule
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Ling-Jia Wang, Omid Savari, Piotr Trzonkowski, Natalia Marek-Trzonkowska, Seda Kizilel, Randall H. Grose, Xiaojun Wang, Martin Tibudan, J M Millis, Tugba Bal, Manami Hara, Karolina Gołąb, Piotr Witkowski, Adam Krzystyniak, and Mark C. Zielinski
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Streptavidin ,endocrine system ,Materials science ,endocrine system diseases ,Confocal ,Cell ,Biotin ,Succinimides ,Polyethylene glycol ,T-Lymphocytes, Regulatory ,Article ,Polyethylene Glycols ,Tissue Culture Techniques ,Islets of Langerhans ,Mice ,Surface-Active Agents ,chemistry.chemical_compound ,Cell Adhesion ,medicine ,Animals ,Humans ,Pentanoic Acids ,Cell adhesion ,Immunosuppression Therapy ,Tissue Survival ,Transplantation ,geography ,geography.geographical_feature_category ,Pancreatic islets ,Carbocyanines ,Islet ,Cell biology ,Mice, Inbred C57BL ,medicine.anatomical_structure ,Biochemistry ,chemistry ,Surgery - Abstract
Background We showed that T regulatory (Treg) cells can be attached to the surface of pancreatic islets providing local immunoprotection. Further optimization of the method can improve coating efficiency, which may prolong graft survival. In this study, we compared the effectiveness of two different molecules used for binding of the Tregs to the surface of pancreatic islets. Our aim was to increase the number of Treg cells attached to islets without compromising islets viability and function. Methods The cell surface of human Treg cells and pancreatic islets was modified using biotin-polyethylene glycol-N-hydroxylsuccinimide (biotin-PEG-NHS) or biotin-PEG-succinimidyl valeric acid ester (biotin-PEG-SVA). Then, islets were incubated with streptavidin as islet/Treg cells binding molecule. Treg cells were stained with CellTracker CM-DiL dye and visualized using a Laser Scanning Confocal Microscope. The number of Treg cells attached per islets surface area was analyzed by Imaris software. The effect of coating on islet functionality was determined using the glucose-stimulated insulin response (GSIR) assay. Results The coating procedure with biotin-PEG-SVA allowed for attaching 40% more Treg cells per 1 μm2 of islet surface. Although viability was comparable, function of the islets after coating using the biotin-PEG-SVA molecule was better preserved than with NHS molecule. GSIR was 62% higher for islets coated with biotin-PEG-SVA compared to biotin-PEG-NHS. Conclusion Coating of islets with Treg cells using biotin-PEG-SVA improves effectiveness with better preservation of the islet function. Improvement of the method of coating pancreatic islets with Treg cells could further facilitate the effectiveness of this novel immunoprotective approach and translation into clinical settings.
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- 2014
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43. Quantification of interactions among circadian clock proteins via surface plasmon resonance
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Riza Kizilel, Seda Kizilel, and Burcu Kepsutlu
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endocrine system ,NPAS2 ,Circadian clock ,Analytical chemistry ,Biology ,PER2 ,Structural Biology ,Transcription (biology) ,Biophysics ,CLOCK Proteins ,Circadian rhythm ,Surface plasmon resonance ,Molecular Biology ,PER1 - Abstract
Circadian clock is an internal time keeping system recurring 24 h daily rhythm in physiology and behavior of organisms. Circadian clock contains transcription and translation feedback loop involving CLOCK/NPAS2, BMAL1, Cry1/2, and Per1/2. In common, heterodimer of CLOCK/NPAS2 and BMAL1 binds to EBOX element in the promoter of Per and Cry genes in order to activate their transcription. CRY and PER making heterodimeric complexes enter the nucleus in order to inhibit their own BMAL1-CLOCK-activated transcription. The aim of this study was to investigate and quantify real-time binding affinities of clock proteins among each other on and off DNA modes using surface plasmon resonance. The pairwise interaction coefficients among clock proteins, as well as interaction of PER2, CRY2, and PER2 : CRY2 proteins with BMAL1 : CLOCK complex in the presence and absence of EBOX motif have been investigated via analysis of surface plasmon resonance data with pseudo first-order reaction kinetics approximation and via nonlinear regression curve fitting. The results indicated that CRY2 and PER2, BMAL1, and CLOCK proteins form complexes in vitro and that PER2, CRY2 and PER2 : CRY2 complex have similar affinities toward BMAL1 : CLOCK complex. CRY2 protein had the highest affinity toward EBOX complex, whereas PER2 and CRY2 : PER2 complexes displayed low affinity toward EBOX complex. The quantification of the interaction between clock proteins is critical to understand the operation mechanism of the biological clock and to address the behavioral and physiological disorders, and it will be useful for the design of new drugs toward clock-related diseases. Copyright © 2014 John Wiley & Sons, Ltd.
- Published
- 2014
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44. Characterization of protein release from poly(ethylene glycol) hydrogels with crosslink density gradients
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Tugba Bal, Burcu Kepsutlu, and Seda Kizilel
- Subjects
Materials science ,Biomedical Engineering ,macromolecular substances ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Biomaterials ,chemistry.chemical_compound ,Tissue engineering ,Polymer chemistry ,PEG ratio ,Cell encapsulation ,technology, industry, and agriculture ,Metals and Alloys ,021001 nanoscience & nanotechnology ,Controlled release ,3. Good health ,0104 chemical sciences ,Transplantation ,Membrane ,chemistry ,Self-healing hydrogels ,Ceramics and Composites ,Biophysics ,0210 nano-technology ,Ethylene glycol - Abstract
Transplantation of cells within poly(ethylene glycol) (PEG) hydrogel scaffolds as effective immunoisolation barriers is becoming increasingly important strategy for tissue engineering and regenerative medicine. In these applications, crosslink density of these membranes has significant effect on the control of diffusion of many biomolecules such as nutrients, cellular wastes, and hormones. When these networks are designed with crosslink density gradients, alterations in network structure may have an effect on biomolecule diffusivity. The goal of this work was to synthesize PEG hydrogels via surface initiated photopolymerization for use in applications involving physiological protein delivery and cell encapsulation. For this purpose, PEG hydrogels of differing crosslink density gradients were formed via surface initiated photopolymerization, and the diffusion of model proteins with various molecular weights were observed through these PEG hydrogel scaffolds with defined properties. Diffusion coefficients were on the order of 10−7−10−8 cm2/s and protein diffusion time scales varied from 5 min to 30 h. The results confirm that synthetic PEG hydrogels with crosslink density gradients are promising for controlled release of bioactive molecules and for covalent incorporation of ligands to support cell viability. © 2013 Wiley Periodicals, Inc. J Biomed Mater Res Part A: 102A: 487–495, 2014.
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- 2013
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45. Computational and experimental investigation of DNA repair protein photolyase interactions with low molecular weight drugs
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Burak Erman, Selimcan Azizoglu, Ibrahim Halil Kavakli, Riza Kizilel, Seda Kizilel, and Maja Marušič
- Subjects
Drug ,0303 health sciences ,Chemistry ,media_common.quotation_subject ,education ,DNA photolyase ,3. Good health ,Dissociation constant ,03 medical and health sciences ,0302 clinical medicine ,Cryptochrome ,Biochemistry ,Structural Biology ,Docking (molecular) ,DNA Repair Protein ,Surface plasmon resonance ,Photolyase ,Molecular Biology ,030217 neurology & neurosurgery ,030304 developmental biology ,media_common - Abstract
This paper reports the previously unknown interactions between eight low molecular weight commercially available drugs (130–800 Da) and DNA repair protein photolyase using computational docking simulations and surface plasmon resonance (SPR) experiments. Theoretical dissociation constants, Kd, obtained from molecular docking simulations were compared with the values found from SPR experiments. Among the eight drugs analyzed, computational and experimental values showed similar binding affinities between selected drug and protein pairs. We found no significant differences in binding interactions between pure and commercial forms of the drug lornoxicam and DNA photolyase. Among the eight drugs studied, prednisone, desloratadine, and azelastine exhibited the highest binding affinity (Kd = 1.65, 2.05, and 8.47 μM, respectively) toward DNA photolyase. Results obtained in this study are promising for use in the prediction of unknown interactions of common drugs with specific proteins such as human clock protein cryptochrome. Copyright © 2013 John Wiley & Sons, Ltd.
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- 2013
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46. Macromol. Biosci. 2/2017
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Pelin Erkoc, Seda Kizilel, Ahmet Cingoz, and Tugba Bagci-Onder
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Biomaterials ,Polymers and Plastics ,Chemical engineering ,Chemistry ,Materials Chemistry ,Bioengineering ,Nanotechnology ,Water-in-water emulsion ,Trail resistance ,Biotechnology - Published
- 2017
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- View/download PDF
47. Quinacrine Mediated Sensitization of Glioblastoma (GBM) Cells to TRAIL through MMP-Sensitive PEG Hydrogel Carriers
- Author
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Ahmet Cingoz, Seda Kizilel, Pelin Erkoc, and Tugba Bagci Onder
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0301 basic medicine ,Polymers and Plastics ,Cell Survival ,Bioengineering ,Apoptosis ,02 engineering and technology ,Drug resistance ,Matrix metalloproteinase ,Microscopy, Atomic Force ,Polyethylene Glycols ,Polymerization ,Biomaterials ,TNF-Related Apoptosis-Inducing Ligand ,03 medical and health sciences ,X-Ray Diffraction ,Cell Line, Tumor ,PEG ratio ,Materials Chemistry ,medicine ,Humans ,Sensitization ,Drug Carriers ,Chemistry ,Activator (genetics) ,Hydrogels ,021001 nanoscience & nanotechnology ,Controlled release ,Gene Expression Regulation, Neoplastic ,Drug Liberation ,030104 developmental biology ,medicine.anatomical_structure ,Quinacrine ,Immunology ,Cancer research ,Matrix Metalloproteinase 2 ,Tumor necrosis factor alpha ,0210 nano-technology ,Glioblastoma ,Peptides ,Biotechnology - Abstract
Overcoming drug resistance is a major challenge for cancer therapy. Tumor necrosis factor α-related apoptosis-inducing ligand (TRAIL) is a potent therapeutic as an activator of apoptosis, particularly in tumor but not in healthy cells. However, its efficacy is limited by the resistance of tumor cell populations to the therapeutic substance. Here, we have addressed this limitation through the development of a controlled release system, matrix-metalloproteinase (MMP)-sensitive and arg-gly-asp-ser (RGDS) peptide functionalized poly (ethylene-glycol) (PEG) particles which are synthesized via visible-light-induced water-in-water emulsion polymerization. Quinacrine (QC), a recently discovered TRAIL sensitizer drug, is loaded into the hydrogel carriers and the influence of this system on the apoptosis of a malignant type of brain cancer, glioblastoma multiforme (GBM), has been investigated in detail. The results suggest that MMP-sensitive particles are cytocompatible and superior to promote TRAIL-induced apoptosis in GBM cells when loaded with QC. Compared to QC and TRAIL alone, combination of QC-loaded PEG hydrogel and TRAIL demonstrates synergistic apoptotic inducing behavior. Furthermore, QC-loaded particles, but not QC or PEG-hydrogels alone, enhance apoptosis as is measured through expression of apoptosis-related genes. This system is promising to significantly improve the efficacy of chemotherapeutic drugs and suggests a combination treatment for GBM therapy.
- Published
- 2016
48. Application of the Numerical Fractionation Approach to the Design of Biofunctional PEG Hydrogel Membranes
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Riza Kizilel and Seda Kizilel
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PEG Hydrogel ,Polymers and Plastics ,General Chemical Engineering ,technology, industry, and agriculture ,macromolecular substances ,02 engineering and technology ,General Chemistry ,Fractionation ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Membrane ,Monomer ,Photopolymer ,Tissue engineering ,chemistry ,Chemical engineering ,Polymer chemistry ,Self-healing hydrogels ,Molar mass distribution ,0210 nano-technology - Abstract
A mathematical model is described for surface-initiated photopolymerization of PEG-DA forming crosslinked biofunctional PEG hydrogel membranes based on the NF technique. The model includes an additional monomer with biological functionality, which is a common experimental strategy for the design of ECM mimics in tissue engineering in order to direct signaling pathways, and considers concentration-dependent VP propagation and reaction diffusion termination. The influence of these features on the crosslink density of the soluble and gel phases, the progression through gelation, sol/gel fraction, and molecular weight distribution of biofunctional PEG hydrogel are studied using the NF model. This model may be useful for specific applications of tissue engineering.
- Published
- 2012
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49. Controlled drug delivery through a novel PEG hydrogel encapsulated silica aerogel system
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Tugba Bal, Seda Giray, Ayşe Meriç Kartal, Can Erkey, and Seda Kizilel
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Materials science ,Chemistry, Pharmaceutical ,Composite number ,Biomedical Engineering ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Hydrogel, Polyethylene Glycol Dimethacrylate ,Polyethylene Glycols ,Diffusion ,Biomaterials ,Polymer chemistry ,PEG ratio ,Solubility ,Prepolymer ,Supercritical carbon dioxide ,technology, industry, and agriculture ,Metals and Alloys ,Aerogel ,Silicon Dioxide ,021001 nanoscience & nanotechnology ,Supercritical fluid ,0104 chemical sciences ,Chemical engineering ,Ketoprofen ,Delayed-Action Preparations ,Drug delivery ,Ceramics and Composites ,Eosine Yellowish-(YS) ,Adsorption ,0210 nano-technology ,Hydrophobic and Hydrophilic Interactions ,Porosity - Abstract
A novel composite material consisting of a silica aerogel core coated by a poly(ethylene) glycol (PEG) hydrogel was developed. The potential of this novel composite as a drug delivery system was tested with ketoprofen as a model drug due to its solubility in supercritical carbon dioxide. The results indicated that both drug loading capacity and drug release profiles could be tuned by changing hydrophobicity of aerogels, and that drug loading capacity increased with decreased hydrophobicity, while slower release rates were achieved with increased hydrophobicity. Furthermore, higher concentration of PEG diacrylate in the prepolymer solution of the hydrogel coating delayed the release of the drug which can be attributed to the lower permeability at higher PEG diacrylate concentrations. The novel composite developed in this study can be easily implemented to achieve the controlled delivery of various drugs and/or proteins for specific applications. (C) 2012 Wiley Periodicals, Inc. J Biomed Mater Res Part A:, 2012.
- Published
- 2012
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50. Biomedical Applications of Metal Organic Frameworks
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Seda Keskin and Seda Kizilel
- Subjects
Nanoporous ,General Chemical Engineering ,fungi ,Drug delivery ,Nanotechnology ,Metal-organic framework ,General Chemistry ,Drug Storage ,Industrial and Manufacturing Engineering ,Nitric oxide storage - Abstract
We have witnessed a rapid growth in the field of a new nanoporous material group, metal organic frameworks (MOFs), over the past decade. MOFs possess a wide array of potential applications in chemical engineering, chemistry, and materials science, including gas storage, gas separation, and catalysis. One of the areas MOFs started to appear recently is biomedical applications. The unique physical and chemical characteristics of MOFs make them promising candidates for drug storage and drug delivery, nitric oxide storage and delivery, imaging, and sensing. In this review, we outline the recent progress of using MOFs as a promising platform in biomedical applications due to their high drug loading capacity, biodegradability, and versatile functionality. We also demonstrate the potential of MOFs for continuous development and implementation in biomedical applications by discussing issues including stability, toxicology, and biocompatibility. Although significant progress has been made in utilizing MOFs for bio...
- Published
- 2011
- Full Text
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