14 results on '"Gosti A"'
Search Results
2. Two Receptor Binding Strategy of SARS-CoV-2 Is Mediated by Both the N-Terminal and Receptor-Binding Spike Domain
- Author
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Monti, Michele, Milanetti, Edoardo, Frans, Myrthe T., Miotto, Mattia, Di Rienzo, Lorenzo, Baranov, Maksim V., Gosti, Giorgio, Somavarapu, Arun Kumar, Nagaraj, Madhu, Golbek, Thaddeus W., Rossing, Emiel, Moons, Sam J., Boltje, Thomas J., van den Bogaart, Geert, Weidner, Tobias, Otzen, Daniel E., Tartaglia, Gian Gaetano, Ruocco, Giancarlo, and Roeters, Steven J.
- Abstract
It is not well understood why severe acute respiratory syndrome (SARS)-CoV-2 spreads much faster than other β-coronaviruses such as SARS-CoV and Middle East respiratory syndrome (MERS)-CoV. In a previous publication, we predicted the binding of the N-terminal domain (NTD) of SARS-CoV-2 spike to sialic acids (SAs). Here, we experimentally validate this interaction and present simulations that reveal a second possible interaction between SAs and the spike protein via a binding site located in the receptor-binding domain (RBD). The predictions from molecular-dynamics simulations and the previously-published 2D-Zernike binding-site recognition approach were validated through flow-induced dispersion analysis (FIDA)─which reveals the capability of the SARS-CoV-2 spike to bind to SA-containing (glyco)lipid vesicles, and flow-cytometry measurements─which show that spike binding is strongly decreased upon inhibition of SA expression on the membranes of angiotensin converting enzyme-2 (ACE2)-expressing HEK cells. Our analyses reveal that the SA binding of the NTD and RBD strongly enhances the infection-inducing ACE2 binding. Altogether, our work provides in silico, in vitro, and cellular evidence that the SARS-CoV-2 virus utilizes a two-receptor (SA and ACE2) strategy. This allows the SARS-CoV-2 spike to use SA moieties on the cell membrane as a binding anchor, which increases the residence time of the virus on the cell surface and aids in the binding of the main receptor, ACE2, via 2D diffusion.
- Published
- 2024
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3. Blind scattering-assisted imaging enhanced by deep learning
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Vakoc, Benjamin J., Wojtkowski, Maciej, Yasuno, Yoshiaki, Leonetti, M., Xypakis, Emmanouil, Gosti, Giorgio, Santagati, Raffaele, and Ruocco, Giancarlo
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- 2023
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4. Microglia reactivity entails microtubule remodeling from acentrosomal to centrosomal arrays
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Rosito, Maria, Sanchini, Caterina, Gosti, Giorgio, Moreno, Manuela, De Panfilis, Simone, Giubettini, Maria, Debellis, Doriana, Catalano, Federico, Peruzzi, Giovanna, Marotta, Roberto, Indrieri, Alessia, De Leonibus, Elvira, De Stefano, Maria Egle, Ragozzino, Davide, Ruocco, Giancarlo, Di Angelantonio, Silvia, and Bartolini, Francesca
- Abstract
Microglia reactivity entails a large-scale remodeling of cellular geometry, but the behavior of the microtubule cytoskeleton during these changes remains unexplored. Here we show that activated microglia provide an example of microtubule reorganization from a non-centrosomal array of parallel and stable microtubules to a radial array of more dynamic microtubules. While in the homeostatic state microglia nucleate microtubules at Golgi outposts, activating signaling induces recruitment of nucleating material nearby the centrosome, a process inhibited by microtubule stabilization. Our results demonstrate that a hallmark of microglia reactivity is a striking remodeling of the microtubule cytoskeleton and suggest that while pericentrosomal microtubule nucleation may serve as a distinct marker of microglia activation, inhibition of microtubule dynamics may provide a different strategy to reduce microglia reactivity in inflammatory disease.
- Published
- 2023
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5. Postplacement voltage assignment under performance constraints
- Author
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Wu, Huaizhi, Wong, Martin, and Gosti, Wilsin
- Abstract
Multi-Vdd is an effective method to reduce both leakage and dynamic power. A key challenge in a multi-Vdd design is to control the complexity of the power-supply system and limit the demand for level shifters. This can be tackled by grouping cells of different supply voltages into a small number of voltage islands. Recently, an elegant algorithm was proposed for generating voltage islands that balance the power-versus-design-cost tradeoff under performance requirement, according to the placement proximity of the critical cells. One prerequisite of this algorithm is an initial voltage assignment at the standard-cell level that meets timing. In this article, we present a novel method to produce quality voltage assignment which not only meets timing but also forms good proximity of the critical cells to provide a smooth input to the aforementioned voltage island generation. Our algorithm is based on effective delay budgeting and efficient computation of physical proximity by Voronoi diagram. Our extensive experiments on real industrial designs show that our algorithm leads to 25%--75% improvement in the voltage island generation in terms of the number of voltage islands generated, with computation time only linear to design size.
- Published
- 2008
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6. FSM Encoding for BDD Representations
- Author
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Gosti, Wilsin, Villa, Tiziano, Saldanha, Alex, and Sangiovanni-Vincentelli, Alberto
- Abstract
FSM Encoding for BDD RepresentationsWe address the problem of encoding the state variables of a finite state machine such that the BDD representing the next state function and the output function has the minimum number of nodes. We present an exact algorithm to solve this problem when only the present state variables are encoded. We provide results on MCNC benchmark circuits.
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- 2007
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7. Identification of centrosomal proteins in a human lymphoblastic cell line.
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Gosti‐Testu, F., Marty, M.C., Berges, J., Maunoury, R., and Bornens, M.
- Abstract
Highly enriched preparations of centrosomes from human T‐lymphoblasts KE 37 were analyzed for their protein content. The specific pattern of polypeptides was characterized by an abundant subset of high mol. wt proteins and a major group of proteins with mol. wt ranging from 50 to 65 kd. Several immunoreactive proteins were identified, using a rabbit serum spontaneously reacting with human centrosomes. They include a family of high mol. wt ranging from 180 to 250 kd, a 130‐kd protein and a 60‐65 kd doublet. These antigens have the following properties: they are localized within the pericentriolar material; their abundance, as judged by centrosome labelling, changes significantly during the cell cycle, the maximum being observed at the pole of the metaphasic spindle; in Taxol‐treated cells where the centrosome is no longer acting as a nucleating center, they redistribute at one end of the microtubule arrays in both mitotic and interphasic cells, as expected for nucleating, or capping, proteins. All these properties are compatible with their involvement in microtubule nucleation.
- Published
- 1986
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8. Identification of centrosomal proteins in a human lymphoblastic cell line.
- Author
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Gosti‐Testu, F., Marty, M.C., Berges, J., Maunoury, R., and Bornens, M.
- Abstract
Highly enriched preparations of centrosomes from human T‐lymphoblasts KE 37 were analyzed for their protein content. The specific pattern of polypeptides was characterized by an abundant subset of high mol. wt proteins and a major group of proteins with mol. wt ranging from 50 to 65 kd. Several immunoreactive proteins were identified, using a rabbit serum spontaneously reacting with human centrosomes. They include a family of high mol. wt ranging from 180 to 250 kd, a 130‐kd protein and a 60‐65 kd doublet. These antigens have the following properties: they are localized within the pericentriolar material; their abundance, as judged by centrosome labelling, changes significantly during the cell cycle, the maximum being observed at the pole of the metaphasic spindle; in Taxol‐treated cells where the centrosome is no longer acting as a nucleating center, they redistribute at one end of the microtubule arrays in both mitotic and interphasic cells, as expected for nucleating, or capping, proteins. All these properties are compatible with their involvement in microtubule nucleation.
- Published
- 1986
- Full Text
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9. Centrosomal proteins and lactate dehydrogenase possess a common epitope in human cell lines.
- Author
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Gosti, F, Marty, M C, Courvalin, J C, Maunoury, R, and Bornens, M
- Abstract
A spontaneously arising rabbit anti-centrosome serum with strong human specificity, used to identify specific antigens in isolated centrosomes, was shown to react with several noncentrosomal proteins including a 36-kDa protein that appeared to be the major cellular antigen. To explore the immunological relationship between noncentrosomal and centrosomal antigens, immunoglobulins were affinity purified using the individual noncentrosomal antigens (from lymphoblastoma KE37 cells) and were tested for their capacity to bind to human centrosomes in situ and to proteins from isolated centrosomes. In this way, the 36-kDa antigen, an abundant cytosolic protein, was shown to share at least one antigenic determinant with high molecular weight centrosomal proteins. This antigen was further identified by mild proteolysis as the glycolytic enzyme lactate dehydrogenase. In all the analyzed human cell lines, the centrosomal staining in situ was correlated with a strong labeling of purified lactate dehydrogenase in immunoblots. Conversely, the absence of centrosomal staining in rodent cells was always correlated with the absence of lactate dehydrogenase labeling. These data suggest an evolutionary relationship between centrosomal proteins and this "housekeeping" enzyme.
- Published
- 1987
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10. Human centrosomal epitope is shared specifically with human lactate dehydrogenase-B isozyme
- Author
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Gosti, F., Li, S.S.L., Maunoury, R., and Bornens, M.
- Abstract
A rabbit serum (0013) used to identify pericentriolar proteins from isolated centrosomes (Gosti-Testu, F., Marty, M.C., Berges, J., Maunoury, R. and Bornens, M. (1986) EMBO J. 5, 2545–2550) was shown also to react through the same epitope with several non-centrosomal proteins including a major 36 kDa cytosolic antigen. This protein was identified to be human lactate dehydrogenase and the co-distribution of 0013 epitope on the centrosomal protein and on lactate dehydrogenase (LDH) was shown to be specific for human cells (Gosti, F., Marty, M.C., Courvalin, J.C., Maunoury, R. and Bornens, M. (1987) Proc. Natl. Acad. Sci. USA 84, 1000–1004). Human hepatic cells constitute, so far, the only exception to this co-distribution rule. By using this cell type which expresses only the LDH-A4 isozyme, we demonstrate that 0013 epitope is specific for the human LDH-B subunit, making serum 0013 the strongest anti-LDH-B available so far. The evolutionary and physiological significance of this situation is discussed.
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- 1992
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11. A protein of Mr 80,000 is associated with the nucleolus organizer of human cell lines
- Author
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Courvalin, Jean -Claude, Hernandez-Verdun, Daniele, Gosti-Testu, Francoise, Marty, Marie -Chantal, Maunoury, Roger, and Bornens, Michel
- Abstract
A rabbit serum which had previously been reported to have an immunological affinity for centrosomes of human cell lines was shown also to be specific for the nucleus. Optical and ultrastructural immunolocalization in HeLa cells showed that this specificity is restricted to the fibrillar centre of nucleoli either in untreated or actinomycin D treated interphase cells. In mitotic cells discrete labelling was observed on chromosomes and shown to correspond, on spread metaphase plates, to the short arms of acrocentric chromosomes, i.e. to the nucleolar organizer regions (NORs). Using independent cell fractionation procedures in the human T-lymphoblastic KE 37 cell line and purification of immunoglobulins by affinity to antigens detected by electrophoresis and blotting, a strict correlation between immunoreactive proteins and cytological staining was established. The nucleolar specificity was shown to correspond to a protein with an M
r of 80,000 while the centrosomal specificity corresponded principally to a protein doublet of 60,000–65,000. These antigens share common epitopes as shown by the staining of both NOR and centrosome by immunoglobulins purified by affinity to either type of protein.- Published
- 1986
- Full Text
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12. Human centrosomal epitope is shared specifically with human lactate dehydrogenase‐B isozyme
- Author
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Gosti, F., Li, S.S.L., Maunoury, R., and Bornens, M.
- Abstract
A rabbit serum (0013) used to identify pericentriolar proteins from isolated centrosomes (Gosti‐Testu, F., Marty, M.C., Berges, J., Maunoury, R. and Bornens, M. (1986) EMBO J. 5, 2545–2550) was shown also to react through the same epitope with several non‐centrosomal proteins including a major 36 kDa cytosolic antigen. This protein was identified to be human lactate dehydrogenase and the co‐distribution of 0013 epitope on the centrosomal protein and on lactate dehydrogenase (LDH) was shown to be specific for human cells (Gosti, F., Marty, M.C., Courvalin, J.C., Maunoury, R. and Bornens, M. (1987) Proc. Natl. Acad. Sci. USA 84, 1000–1004). Human hepatic cells constitute, so far, the only exception to this co‐distribution rule. By using this cell type which expresses only the LDH‐A4 isozyme, we demonstrate that 0013 epitope is specific for the human LDH‐B subunit, making serum 0013 the strongest anti‐LDH‐B available so far. The evolutionary and physiological significance of this situation is discussed.
- Published
- 1992
- Full Text
- View/download PDF
13. Abscisic acid-dependent and -independent regulation of gene expression by progressive drought in Arabidopsis thaliana
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Gosti, Françoise, Bertauche, Nathalie, Vartanian, Nicole, and Giraudat, Jérôme
- Abstract
Four clones corresponding to Arabidopsis thaliana transcripts regulated by progressive drought stress were isolated. Abundance of the AtDiB, AtDi19 and AtDi21 mRNAs increased in both roots and leaves during progressive drought. The AtDr4 mRNA was expressed in a root-specific manner in regularly watered plants, and became undetectable under drought conditions. In all cases, the drought-induced modifications of mRNA abundance could be reversed by subsequent rehydration. The predicted AtDr4 protein displays extensive similarity to various members of the Kunitz protein family, suggesting that AtDr4 might be a root-specific protease inhibitor. Of these four genes, only AtDi8 and AtDi21 responded to an exogenous supply of abscisic acid (ABA). Analysis of the ABA-deficient aba mutant demonstrated that endogenous ABA indeed participates in the drought regulation of these two transcripts. This ABA-dependent response was differentially affected in the various classes of ABA-insensitive Arabidopsis mutants. The AtDi19 and AtDr4 mRNAs both responded to drought in an ABA-independent manner, but at distinct thresholds of the progressive drought stress. Regulation of these four target genes by progressive drought stress thus appears to be mediated by at least three distinct signals, only one of which is ABA.
- Published
- 1995
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14. Current advances in abscisic acid action and signalling
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Giraudat, Jérôme, Parcy, François, Bertauche, Nathalie, Gosti, Françoise, Leung, Jeffrey, Morris, Peter-Christian, Bouvier-Durand, Michelle, and Vartanian, Nicole
- Abstract
Abscisic acid (ABA) participates in the control of diverse physiological processes. The characterization of deficient mutants has clarified the ABA biosynthetic pathway in higher plants. Deficient mutants also lead to a revaluation of the extent of ABA action during seed development and in the response of vegetative tissues to environmental stress. Although ABA receptor(s) have not yet been identified, considerable progress has been recently made in the characterization of more downstream elements of the ABA regulatory network. ABA controls stomatal aperture by rapidly regulating identified ion transporters in guard cells, and the details of the underlying signalling pathways start to emerge. ABA actions in other cell types involve modifications of gene expression. The promoter analysis of ABA-responsive genes has revealed a diversity of cis-acting elements and a few associated trans-acting factors have been isolated. Finally, characterization of mutants defective in ABA responsiveness, and molecular cloning of the corresponding loci, has proven to be a powerful approach to dissect the molecular nature of ABA signalling cascades.
- Published
- 1994
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