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The paper deals with the application of growth-simulation model SYBILA in conjunction with pulse tomography ARBOTOM for the evaluation of the strategy that was chosen for the management and protection of hardwood floodplain-forest in two study sites in Litovelske Pomoravi Protected Landscape Area (Czech Republic). The results of the simulation-growth model, supplemented by wood tomography showed that the current method of protection and management of the studied floodplain-forest ecosystems would lead to a change in habitat character, which is in conflict with the basic mission of Natura 2000. Simultaneous application of both non-invasive methods enables adjustments to the protected area management plan in accordance with the principles of adaptive ecosystem management. The results of the paper show that the combination of the two relatively new non-invasive methods of ecological research can be a promising support tool for adaptive ecosystem management and protection of forest ecosystems in protected areas. [ABSTRACT FROM AUTHOR]