35 results on '"Marcel H. Schulz"'
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2. The adapted Activity-By-Contact model for enhancer-gene assignment and its application to single-cell data.
3. Fast detection of differential chromatin domains with SCIDDO.
4. Machine learning for deciphering cell heterogeneity and gene regulation.
5. A universal model of RNA.DNA: DNA triplex formation accurately predicts genome-wide RNA-DNA interactions.
6. Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data.
7. Improved linking of motifs to their TFs using domain information.
8. EpiRegio: analysis and retrieval of regulatory elements linked to genes.
9. Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data.
10. Fostering accessible online education using Galaxy as an e-learning platform.
11. On the problem of confounders in modeling gene expression.
12. Large-scale inference of competing endogenous RNA networks with sparse partial correlation.
13. Energy efficient convolutional neural networks for arrhythmia detection.
14. In silico read normalization using set multi-cover optimization.
15. An ontology-based method for assessing batch effect adjustment approaches in heterogeneous datasets.
16. RegulatorTrail: a web service for the identification of key transcriptional regulators.
17. Informed kmer selection for de novo transcriptome assembly.
18. TEPIC 2 - an extended framework for transcription factor binding prediction and integrative epigenomic analysis.
19. Exact Score Distribution Computation for Similarity Searches in Ontologies.
20. Efficient String Mining under Constraints Via the Deferred Frequency Index.
21. Fast and Adaptive Variable Order Markov Chain Construction.
22. Fiona: a parallel and automatic strategy for read error correction.
23. JAMI: fast computation of conditional mutual information for ceRNA network analysis.
24. Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels.
25. Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts.
26. Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS.
27. Bayesian ontology querying for accurate and noise-tolerant semantic searches.
28. DECOD: fast and accurate discriminative DNA motif finding.
29. Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads.
30. The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences.
31. Predicting transcription factor binding using ensemble random forest models.
32. A general concept for consistent documentation of computational analyses.
33. Multitask regression for condition-specific prioritization of miRNA targets in transcripts.
34. DREM 2.0: Improved reconstruction of dynamic regulatory networks from time-series expression data.
35. Exact score distribution computation for ontological similarity searches.
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