1. The crystal structure of the drug target Mycobacterium tuberculosis methionyl-tRNA synthetase in complex with a catalytic intermediate
- Author
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Ximena Barros-Álvarez, Wim G. J. Hol, Christophe L. M. J. Verlinde, Stewart Turley, Frederick S. Buckner, Erkang Fan, Ranae M. Ranade, Nicole A. Duster, and J. Robert Gillespie
- Subjects
0301 basic medicine ,Models, Molecular ,Protein Conformation ,Biophysics ,Peptide ,Methionine-tRNA Ligase ,Crystallography, X-Ray ,Biochemistry ,Catalysis ,Research Communications ,Mycobacterium tuberculosis ,03 medical and health sciences ,chemistry.chemical_compound ,Structural Biology ,Catalytic Domain ,Genetics ,Protein biosynthesis ,chemistry.chemical_classification ,DNA ligase ,biology ,Aminoacyl tRNA synthetase ,Active site ,Condensed Matter Physics ,biology.organism_classification ,030104 developmental biology ,Enzyme ,chemistry ,Drug Design ,biology.protein ,Crystallization ,Mycobacterium ,Protein Binding - Abstract
Mycobacterium tuberculosisis a pathogenic bacterial infectious agent that is responsible for approximately 1.5 million human deaths annually. Current treatment requires the long-term administration of multiple medicines with substantial side effects. Lack of compliance, together with other factors, has resulted in a worrisome increase in resistance. New treatment options are therefore urgently needed. Here, the crystal structure of methionyl-tRNA synthetase (MetRS), an enzyme critical for protein biosynthesis and therefore a drug target, in complex with its catalytic intermediate methionyl adenylate is reported. Phenylalanine 292 of theM. tuberculosisenzyme is in an `out' conformation and barely contacts the adenine ring, in contrast to other MetRS structures where ring stacking occurs between the adenine and a protein side-chain ring in the `in' conformation. A comparison with human cytosolic MetRS reveals substantial differences in the active site as well as regarding the position of the connective peptide subdomain 1 (CP1) near the active site, which bodes well for arriving at selective inhibitors. Comparison with the human mitochondrial enzyme at the amino-acid sequence level suggests that arriving at inhibitors with higher affinity for the mycobacterial enzyme than for the mitochondrial enzyme might be achievable.
- Published
- 2018