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Premise: The ~140 species of Lonicera are characterized by variously fused leaves, bracteoles, and ovaries, making it a model system for studying the evolution and development of organ fusion. However, previous phylogenetic analyses, based mainly on chloroplast DNA markers, have yielded uncertain and conflicting results. A well‐supported phylogeny of Lonicera will allow us to trace the evolutionary history of organ fusion. Methods: We inferred the phylogeny of Lonicera using restriction site–associated DNA sequencing (RADSeq), sampling all major clades and 18 of the 23 subsections. This provided the basis for inferring the evolution of five fusion‐related traits. Results: RADSeq data yielded a well‐resolved and well‐supported phylogeny. The two traditionally recognized subgenera (Periclymenum and Chamaecerasus), three of the four sections (Isoxylosteum, Coeloxylosteum, and Nintooa), and half of the subsections sampled were recovered as monophyletic. However, the large and heterogeneous section Isika was strongly supported as paraphyletic. Nintooa, a clade of ~22 mostly vine‐forming species, including L. japonica, was recovered in a novel position, raising the possibility of cytonuclear discordance. We document the parallel evolution of fused leaves, bracteoles, and ovaries, with rare reversals. Most strikingly, complete cupules, in which four fused bracteoles completely enclose two unfused ovaries, arose at least three times. Surprisingly, these appear to have evolved directly from ancestors with free bracteoles instead of partial cupules. Conclusions: We provide the most comprehensive and well‐supported phylogeny of Lonicera to date. Our inference of multiple evolutionary shifts in organ fusion provides a solid foundation for in depth developmental and functional analyses. [ABSTRACT FROM AUTHOR]

Premise: The inflorescences of Solanaceae are unique and complex, which has led to long‐standing disputes over floral symmetry mainly due to different interpretations of the cyme‐like inflorescence structure. The main disagreements have been over how the phyllomes associated with the flower were arranged relative to the inflorescence axis especially during early flower initiation. Methods: Here we investigated the evolution of inflorescences in Solanaceae by analyzing inflorescence structure in the context of phylogeny using ancestral state reconstruction (ASR) to determine the evolutionary transitions between loosely arranged and tightly clustered inflorescences and between monochasial‐like and dichasial‐like cymes. We also reconstructed two‐ and three‐dimensional models for 12 solanaceous species that represent both inflorescence and phylogenetic diversity in the family. Results: Our results indicate that the most recent common ancestor of Solanaceae had a loosely arranged and monochasial‐like cyme, while tightly clustered inflorescences and dichasial‐like cymes were derived. Compared to the known process of scorpioid cyme evolution, Solanaceae achieved their scorpioid cyme‐like inflorescences through a previously undescribed way. Along the pedicel, the two flower‐preceding prophylls are not in the typical transverse position of dicotyledonous plants; they frequently have axillary buds, and the main inflorescence axis continues in a sympodial fashion. As a result, the plane of symmetry of the flower is 36° from the median, and the inflorescence axis and the two flower‐preceding prophylls are symmetrically located along that plane. Conclusions: A better understanding of the morphological evolution of solanaceous inflorescence structure helped clarify the floral symmetry of Solanaceae. [ABSTRACT FROM AUTHOR]