1. Structural insights into the molecular mechanism underlying Sirt5-catalyzed desuccinylation of histone peptides
- Author
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Chengliang Wang, Tianrong Hang, Nan Jia, Li Zhan, Wanbiao Chen, Xuan Zhang, Jianye Zang, and Minhao Wu
- Subjects
SIRT5 ,Cellular differentiation ,Lysine ,Succinic Acid ,Biochemistry ,Histones ,Structure-Activity Relationship ,03 medical and health sciences ,Succinylation ,Residue (chemistry) ,0302 clinical medicine ,Gene expression ,Humans ,Sirtuins ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,biology ,Chemistry ,organic chemicals ,Cell Biology ,Histone ,030220 oncology & carcinogenesis ,Sirtuin ,biology.protein ,bacteria ,Peptides ,Protein Processing, Post-Translational - Abstract
Histone modification is a ubiquitous regulatory mechanism involved in a variety of biological processes, including gene expression, DNA damage repair, cell differentiation, and ontogenesis. Succinylation sites on histones have been identified and may have functional consequences. Here, we demonstrate that human sirtuin 5 (Sirt5) catalyzes the sequence-selective desuccinylation of numerous histone succinyl sites. Structural studies of Sirt5 in complex with four succinyl peptides indicate an essential role for the conserved main chain hydrogen bonds formed by the succinyl lysine (0), +1, and +3 sites for substrate-enzyme recognition. Furthermore, biochemical assays reveal that the proline residue at the +1 site of the histone succinylation substrate is unfavorable for Sirt5 interaction. Our findings illustrate the molecular mechanism underlying the sequence-selective desuccinylase activity of Sirt5 and provide insights for further studies of the biological functions associated with histone succinylation and Sirt5.
- Published
- 2019