11 results on '"Niidome, T"'
Search Results
2. In Vitro Gene Transfection Using Dendritic Poly(<SCP>l</SCP>-lysine)
- Author
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Ohsaki, M., Okuda, T., Wada, A., Hirayama, T., Niidome, T., and Aoyagi, H.
- Abstract
Monodispersed dendritic poly(
l -lysine)s (DPKs) of several generations were synthesized, and their characteristics as a gene transfection reagent were then investigated. The agarose gel shift and ethidium bromide titration assay proved that the DPKs of the third generation and higher could form a complex with a plasmid DNA, and the degree of compaction of the DNA was increased by the increasing number of the generation. The DPKs of the fifth and sixth generation, which have 64 and 128 amine groups on the surface of the molecule, respectively, showed efficient gene transfection ability into several cultivated cell lines without significant cytotoxity. In addition, the transfection efficiency of the DPK of the sixth generation was not seriously reduced even if serum was added at 50% of the final concentration into the transfection medium. Because we can strictly synthesize various DPK derivatives, which have several types of branch units, terminal cationic groups, and so on, they are expected to be a good object of study regarding the basic information on the detailed mechanism of gene transfection into cells. We also expect to be able to easily construct DPK-based functional gene carriers, e.g., DPKs modified by ligands such as a sugar chain, which can enable advanced gene delivery in vivo.- Published
- 2002
- Full Text
- View/download PDF
3. Chain Length of Cationic α-Helical Peptide Sufficient for Gene Delivery into Cells
- Author
-
Niidome, T., Takaji, K., Urakawa, M., Ohmori, N., Wada, A., Hirayama, T., and Aoyagi, H.
- Abstract
To define the minimal peptide length needed for gene delivery into mammalian cells, we synthesized several peptides with shortened chain lengths from the amino-termini of the original amphiphilic peptides (4
6 , Ac-LARL-LARL-LARL-LRAL-LRAL-LRAL-NH2, and Hel 11-7, KLLK-LLLK-LWKK-LLKL-LK), which have been known to have gene transfer abilities into cells. Each synthetic peptide was studied for its ability to bind and aggregate with plasmid DNA and the structural change of the peptide caused by binding with the DNA to establish a relative in vitro gene transfection efficiency in COS-7 cells. As a result, the deletion of eight amino acid residues of 46 had little influence on their ability, whereas that of 12 amino acid residues remarkably reduced the abilities to make aggregates and transfer the DNA into the cell. In the case of the Hel 11-7 series peptides, deletion of amino acid residues caused a considerable reduction in abilities to bind and form aggregates with DNA and to transfer the DNA into cell in due order. In summary, 16 and 17 amino acid residues were sufficient to form aggregates with the DNA and transfer the DNA into the cells in the deletion series of 46 and Hel 11-7, respectively. Furthermore, it was indicated that reduction of membrane perturbation activity of the peptide−DNA complex due to deletion of the peptide chain length caused suppression of the transfection efficiency even if the complex was incorporated into the cells. Transfer of the complex to cytosol mediated by membrane perturbation activity of the peptide is an important step for efficient protein expression from its cDNA. The results of this study will make it easy to design and synthesize a functional gene carrier molecule such as a carbohydrate-modified peptide used in targeted gene delivery.- Published
- 1999
4. Polysaccharide-Based Coacervate Microgel Bearing Cationic Peptides That Achieve Dynamic Cell-Membrane Structure Alteration and Facile Cytosolic Infusion of IgGs.
- Author
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Michibata J, Kawaguchi Y, Hirose H, Eguchi A, Deguchi S, Takayama K, Xu W, Niidome T, Sasaki Y, Akiyoshi K, and Futaki S
- Abstract
Conjugates of the biocompatible polysaccharide pullulan with a cell membrane permeabilizing peptide L17E (PL-L17Es) were prepared with the aim of producing complex coacervates with pronounced intracellular antibody (IgG) delivery activity and stable structures. Coacervates with diameters of a few μm were formed simply by mixing PL-L17Es with IgG labeled with negatively charged fluorescent moieties of Alexa Fluor 488 [IgG(AF488)]. The coacervate resulted in a pronounced cytosolic infusion of IgG(AF488) and IgG binding to the target proteins inside the cell. The droplet structures were maintained even under high salt conditions, and the fluorescence in the droplet was not recovered after photobleaching, suggesting the formation of complex coacervate microgels. Dynamic changes in cell membrane structure to entrap the coacervate microgels were captured by confocal and electron microscopy, resulting in cytosolic IgG infusion. The use of M-lycotoxin instead of L17E resulted in a coacervate microgel with marked IgG delivery activity even in the presence of serum. Successful IgG delivery to primary hepatocytes, undifferentiated induced pluripotent stem (iPS) cells, and iPS cell-derived intestinal epithelial cells was also achieved. The construction of complex coacervate microgels with design flexibility and the validity of intracellular IgG delivery with high salt stability were thus demonstrated.
- Published
- 2024
- Full Text
- View/download PDF
5. Short peptide motifs for long-lasting anchoring to the cell surface.
- Author
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Matsuda M, Hatanaka W, Takeo M, Kim CW, Niidome T, Yamamoto T, Kishimura A, Mori T, and Katayama Y
- Subjects
- Binding Sites, Biotin chemistry, Biotin metabolism, Cell Membrane metabolism, Humans, Hydrophobic and Hydrophilic Interactions, K562 Cells drug effects, K562 Cells metabolism, Ligands, Peptides pharmacology, Protein Engineering methods, Streptavidin chemistry, Amino Acid Motifs, Peptides chemistry, Peptides metabolism
- Abstract
A rational design strategy has been developed for the construction of stable peptide-based anchors for the efficient modification of cell surfaces. Six types of peptide composed of five residues with divalent hydrophobic groups have been designed using this new strategy. Among them, a peptide with a sequence of NBD-Lys-Lys(X)-Lys-Lys-Lys(X)-NH2 (NBD: fluorophore, Lys(X): N-ε-palmitoyl-l-lysine) was found to show the highest modification efficacy and longevity in culture medium. The good performance of this peptide was attributed to (1) its high aqueous solubility, which allowed it to partition from the medium to the cell surface, and (2) the high binding affinity of the saturated palmitoyl groups to the cell membrane. We found that the distribution of the peptide was affected by recycling endosome, which enabled the representation of the peptide following its endocytotic disappearance from the cell membrane. Biotin was also presented on the cell surface using this peptide-based anchor to examine its recognition by streptavidin. The efficacy of the recognition process increased as the length of the oligoethylene glycol spacer increased, indicating that it was necessary for the biotin tag to move away from the membrane glycoproteins on the cell surface to facilitate its efficient recognition by streptavidin.
- Published
- 2014
- Full Text
- View/download PDF
6. Fluorescent polyion complex nanoparticle that incorporates an internal standard for quantitative analysis of protein kinase activity.
- Author
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Nobori T, Shiosaki S, Mori T, Toita R, Kim CW, Nakamura Y, Kishimura A, Niidome T, and Katayama Y
- Subjects
- Biocatalysis, Carbocyanines metabolism, Enzyme Activation, Fluorescence, Fluorescent Dyes metabolism, Ions chemistry, Ions metabolism, Models, Molecular, Molecular Structure, Nanoparticles metabolism, Peptides metabolism, Phosphorylation, Protein Kinase C-alpha analysis, Reference Standards, Rhodamines metabolism, Carbocyanines chemistry, Enzyme Assays methods, Fluorescent Dyes chemistry, Nanoparticles chemistry, Peptides chemistry, Protein Kinase C-alpha metabolism, Rhodamines chemistry
- Abstract
We demonstrate a polyion complex (PIC) nanoparticle that contains both a responsive fluorophore and an "internal standard" fluorophore for quantitative measurement of protein kinase (PK) activity. The PK-responsive fluorophore becomes more fluorescent with PK-catalyzed phosphorylation of substrate peptides incorporated in the PIC, while fluorescence from the internal standard remains unchanged during phosphorylation. This new concept will be useful for quantitative PK assays and the discovery of PK inhibitors.
- Published
- 2014
- Full Text
- View/download PDF
7. Fluorescent nanoparticles consisting of lipopeptides and fluorescein-modified polyanions for monitoring of protein kinase activity.
- Author
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Koga H, Toita R, Mori T, Tomiyama T, Kang JH, Niidome T, and Katayama Y
- Subjects
- Fluorescence, Inhibitory Concentration 50, Molecular Probes chemical synthesis, Polyelectrolytes, Protein Kinase Inhibitors chemical synthesis, Protein Kinases analysis, Fluorescein, High-Throughput Screening Assays methods, Lipopeptides, Nanoparticles chemistry, Polymers, Protein Kinases metabolism
- Abstract
Protein kinase (PK)-responsive nanoparticles (NPs) comprising a hydrophobically modified peptide substrate for PKs and a fluorescein-labeled polyanion (pA-F) were reported for monitoring PK activity via fluorescence intensity measurements. In this system, the formation of NPs by mixing lipopeptides and pA-Fs results in fluorescence quenching, while the quenched fluorescence recovered following dissociation of the NPs owing to the phosphorylation reaction of PKs. Eleven lipopeptides with different hydrophobic moieties (hydrocarbon and lithocholic acid) and four pA-Fs having main chains with differing flexibilities and fluorescein contents were synthesized and used to fabricate a series of twenty-four PK-responsive NP probes. The responses of the PK-responsive NP probes to PKs were evaluated to screen the most suitable NP probes. The assay system was then used to determine the IC(50) values for five inhibitors, the results of which were very similar to those previously reported. Thus, PK-responsive NPs are useful tools for high-throughput screening (HTS) of PK inhibitors.
- Published
- 2011
- Full Text
- View/download PDF
8. Active accumulation of gold nanorods in tumor in response to near-infrared laser irradiation.
- Author
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Shiotani A, Akiyama Y, Kawano T, Niidome Y, Mori T, Katayama Y, and Niidome T
- Subjects
- Acrylic Resins chemistry, Acrylic Resins pharmacokinetics, Animals, Gold chemistry, Male, Mice, Mice, Inbred Strains, Neoplasm Transplantation, Phase Transition, Temperature, Tissue Distribution radiation effects, Gold pharmacokinetics, Infrared Rays, Lasers, Nanotubes chemistry, Neoplasms, Experimental metabolism
- Abstract
Gold nanorods, rod-shaped gold nanoparticles, have strong absorbance in the near-infrared region, and the absorbed light energy can be converted to heat, the so-called photothermal effect. The gold nanorods were coated with thermoresponsive polymers, which have different phase transition temperatures that were controlled by adding comonomers, N,N-dimethylacrylamide (DMAA) or acrylamide (AAm) to N-isopropylacrylamide (NIPAM). The phase transition temperatures of poly(NIPAM-DMAA) and poly(NIPAM-AAm)-coated gold nanorods were 38 and 41 °C, respectively, while polyNIPAM-coated gold nanorods showed phase transition at 34 °C. Irradiation of the coated gold nanorods using the near-infrared laser induced a decrease in their sizes due to a phase transition of the polymer layers. Poly(NIPAM-AAm)-coated gold nanorods stably circulated in the blood flow without a phase transition after intravenous injection. Irradiation of near-infrared light at a tumor after the injection resulted in the gold specifically accumulating in the tumor. This novel accumulation technique which combines a thermoresponsive polymer and the photothermal effect of the gold nanorods should be a powerful tool for targeted delivery in response to light irradiation.
- Published
- 2010
- Full Text
- View/download PDF
9. PNIPAM gel-coated gold nanorods for targeted delivery responding to a near-infrared laser.
- Author
-
Kawano T, Niidome Y, Mori T, Katayama Y, and Niidome T
- Subjects
- Acrylamides chemistry, Animals, Cross-Linking Reagents chemistry, Gels, Mice, Polymers chemistry, Temperature, Acrylic Resins chemistry, Drug Carriers chemistry, Drug Carriers metabolism, Gold chemistry, Infrared Rays, Lasers, Nanotubes chemistry
- Abstract
Gold nanorods can be used as photothermal converters, permitting near-infrared (NIR) light to be transmitted deep into tissues without causing damage. We prepared hybrid nanorods with a core-shell structure, i.e., a single gold nanorod encapsulated in a poly (N-isopropylacrylamide) nanogel. Hybrid nanorods demonstrated remote, reversible, pulsatile phase transition and in vivo action after irradiation using a NIR laser.
- Published
- 2009
- Full Text
- View/download PDF
10. A peptide sequence controls the physical properties of nanoparticles formed by peptide-polymer conjugates that respond to a protein kinase a signal.
- Author
-
Sonoda T, Nogami T, Oishi J, Murata M, Niidome T, and Katayama Y
- Subjects
- Amino Acid Sequence, Phosphorylation, Signal Transduction, Cyclic AMP-Dependent Protein Kinases metabolism, Nanostructures chemistry, Peptides chemistry, Polymers chemistry
- Abstract
We previously reported that poly(N-isopropylacrylamide) grafted with Peptide 1 (-GLRRASLG) and poly(ethylene glycol) changed its physical properties in response to an intracellular protein phosphorylation signal, protein kinase A (PKA) (Katayama, Y. et al. (2001) Macromolecules 34, 905). In this study, we investigated the effect of changing peptide structure on the lower critical solution temperature (LCST) of peptide-polymer conjugates, before and after phosphorylation with PKA. For Peptide 2 (Ac-LRRASL-), which has a formal net charge of +2 at physiological pH, the LCST of the conjugate decreased on phosphorylation. In contrast, the LCSTs of the conjugates with Peptide 3 (-ALRRASLE) and Peptide 4 (Ac-DWDALRRASL-), which have neutral net charges, were greatly increased. This suggests that the LCST of the polymer was mainly governed by two factors: the change in hydration around the polymer chain and the interpeptide electrostatic repulsion, resulting from phosphorylation. These polymers have potential for use as drug capsules that respond to cellular conditions.
- Published
- 2005
- Full Text
- View/download PDF
11. Chain length of cationic alpha-helical peptide sufficient for gene delivery into cells.
- Author
-
Niidome T, Takaji K, Urakawa M, Ohmori N, Wada A, Hirayama T, and Aoyagi H
- Subjects
- Amino Acid Sequence, Animals, CHO Cells, COS Cells, Cations, Cell Membrane metabolism, Circular Dichroism, Cricetinae, DNA chemistry, DNA metabolism, HeLa Cells, Humans, Molecular Sequence Data, Particle Size, Peptides chemical synthesis, Peptides metabolism, Plasmids genetics, Protein Structure, Secondary, Structure-Activity Relationship, Tumor Cells, Cultured, DNA administration & dosage, Gene Transfer Techniques, Peptides administration & dosage, Peptides chemistry
- Abstract
To define the minimal peptide length needed for gene delivery into mammalian cells, we synthesized several peptides with shortened chain lengths from the amino-termini of the original amphiphilic peptides (4(6), Ac-LARL-LARL-LARL-LRAL-LRAL-LRAL-NH( 2,) and Hel 11-7, KLLK-LLLK-LWKK-LLKL-LK), which have been known to have gene transfer abilities into cells. Each synthetic peptide was studied for its ability to bind and aggregate with plasmid DNA and the structural change of the peptide caused by binding with the DNA to establish a relative in vitro gene transfection efficiency in COS-7 cells. As a result, the deletion of eight amino acid residues of 4(6) had little influence on their ability, whereas that of 12 amino acid residues remarkably reduced the abilities to make aggregates and transfer the DNA into the cell. In the case of the Hel 11-7 series peptides, deletion of amino acid residues caused a considerable reduction in abilities to bind and form aggregates with DNA and to transfer the DNA into cell in due order. In summary, 16 and 17 amino acid residues were sufficient to form aggregates with the DNA and transfer the DNA into the cells in the deletion series of 4(6) and Hel 11-7, respectively. Furthermore, it was indicated that reduction of membrane perturbation activity of the peptide-DNA complex due to deletion of the peptide chain length caused suppression of the transfection efficiency even if the complex was incorporated into the cells. Transfer of the complex to cytosol mediated by membrane perturbation activity of the peptide is an important step for efficient protein expression from its cDNA. The results of this study will make it easy to design and synthesize a functional gene carrier molecule such as a carbohydrate-modified peptide used in targeted gene delivery.
- Published
- 1999
- Full Text
- View/download PDF
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