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The alpine meadow on the Qinghai-Tibetan Plateau (QTP), which is sensitive to global climate change and human activities, is subjected to addition of nutrients such as nitrogen (N) and phosphorus (P) in the soil. The impacts of N or P on ecosystem structure and function depend at least partly on the response of soil fungal communities, although few studies have compared the effects of N and P addition, both separately and together. We examined the responses of composition of the soil fungal community to 3-year experimental nutrient additions (control, N, N plus P, and P) in a typical alpine meadow of the QTP. We found that P addition, regardless of N addition, significantly reduced fungal species richness and changed fungal community composition, while the effect of N was undetectable. Nitrogen plus phosphorus caused a more distinct community than either N or P addition alone. Multivariate regression tree, canonical correspondence analysis, and distance-based multivariate linear model analyses all suggested available P was a key parameter determining the diversity and composition of the fungal community. Other parameters such as dissolved organic N, aboveground net primary productivity of forbs, and dissolved organic C played important but secondary roles. The results indicated an important role of P in structuring soil fungal communities in the alpine meadow. Our results suggest that fungal diversity loss and long-term changes in ecosystem stability can result from fertilization management in the fragile alpine environment. [ABSTRACT FROM AUTHOR]