1. Identification of LMO2 transcriptome and interactome in diffuse large B-cell lymphoma
- Author
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Shruti Bhatt, Xiaoyu Jiang, Aharon G. Freud, Shuchun Zhao, Jose A. Martinez-Climent, Andrew J. Gentles, Chuanxin Huang, Izidore S. Lossos, Xiaoqing Lu, Isidro Sánchez-García, Elena Cubedo, Isabel Romero-Camarero, Yasodha Natkunam, Carlos E. Bacchi, Ari Melnick, Ministerio de Economía y Competitividad (España), Fundación Alfonso Martín Escudero, National Institutes of Health (US), Dwoskin Family Foundation, Ministerio de Ciencia e Innovación (España), and European Commission
- Subjects
LMO2 ,Molecular Sequence Data ,Immunology ,Biology ,Biochemistry ,Interactome ,Cell Line ,Transcriptome ,Transferases ,immune system diseases ,Cell Line, Tumor ,Proto-Oncogene Proteins ,hemic and lymphatic diseases ,medicine ,Humans ,Promoter Regions, Genetic ,Mitosis ,Adaptor Proteins, Signal Transducing ,Cell Proliferation ,Centrosome ,Regulation of gene expression ,B-Lymphocytes ,Lymphoid Neoplasia ,Base Sequence ,Tumor Suppressor Proteins ,Germinal center ,Cell Biology ,Hematology ,LIM Domain Proteins ,medicine.disease ,Gene Expression Regulation, Neoplastic ,Cancer research ,RNA, Long Noncoding ,Lymphoma, Large B-Cell, Diffuse ,Diffuse large B-cell lymphoma ,TAL1 - Abstract
LMO2 regulates gene expression by facilitating the formation of multipartite DNA-binding complexes. In B cells, LMO2 is specifically up-regulated in the germinal center (GC) and is expressed in GC-derived non-Hodgkin lymphomas. LMO2 is one of the most powerful prognostic indicators in diffuse large B-cell (DLBCL) patients. However, its function in GC B cells and DLBCL is currently unknown. In this study, we characterized the LMO2 transcriptome and transcriptional complex in DLBCL cells. LMO2 regulates genes implicated in kinetochore function, chromosome assembly, and mitosis. Overexpression of LMO2 in DLBCL cell lines results in centrosome amplification. In DLBCL, the LMO2 complex contains some of the traditional partners, such as LDB1, E2A, HEB, Lyl1, ETO2, and SP1, but not TAL1 or GATA proteins. Furthermore, we identified novel LMO2 interacting partners: ELK1, nuclear factor of activated T-cells (NFATc1), and lymphoid enhancer-binding factor1 (LEF1) proteins. Reporter assays revealed that LMO2 increases transcriptional activity of NFATc1 and decreases transcriptional activity of LEF1 proteins. Overall, our studies identified a novel LMO2 transcriptome and interactome in DLBCL and provides a platform for future elucidation of LMO2 function in GC B cells and DLBCL pathogenesis. © 2012 by The American Society of Hematology., E.C. is partially supported by the Fundacion Alfonso Martin Escudero. I.S.L. is supported by National Institutes of Health (NIH) grants CA109335, CA122105, and U56 CA112973, and the Dwoskin Family and Recio Family foundations. I.S.G. is supported by MICINN (SAF2009-08 803), and by MEC OncoBIO Consolider- Ingenio 2010 (Ref. CSD2007-0017). All Spanish funding is cosponsored by the European Union FEDER program.
- Published
- 2012
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