17 results on '"Kopetz, S"'
Search Results
2. Cytokine profile and prognostic significance of high neutrophil-lymphocyte ratio in colorectal cancer
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Chen, Z-Y, primary, Raghav, K, additional, Lieu, C H, additional, Jiang, Z-Q, additional, Eng, C, additional, Vauthey, J-N, additional, Chang, G J, additional, Qiao, W, additional, Morris, J, additional, Hong, D, additional, Hoff, P, additional, Tran, H, additional, Menter, D G, additional, Heymach, J, additional, Overman, M, additional, and Kopetz, S, additional
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- 2015
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3. Association between KRAS mutation and lung metastasis in advanced colorectal cancer
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Pereira, A A L, primary, Rego, J F M, additional, Morris, V, additional, Overman, M J, additional, Eng, C, additional, Garrett, C R, additional, Boutin, A T, additional, Ferrarotto, R, additional, Lee, M, additional, Jiang, Z-Q, additional, Hoff, P M, additional, Vauthey, J-N, additional, Vilar, E, additional, Maru, D, additional, and Kopetz, S, additional
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- 2014
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4. The requirement for freshly isolated human colorectal cancer (CRC) cells in isolating CRC stem cells
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Fan, F, primary, Bellister, S, additional, Lu, J, additional, Ye, X, additional, Boulbes, D R, additional, Tozzi, F, additional, Sceusi, E, additional, Kopetz, S, additional, Tian, F, additional, Xia, L, additional, Zhou, Y, additional, Bhattacharya, R, additional, and Ellis, L M, additional
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- 2014
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5. Severe obesity prior to diagnosis limits survival in colorectal cancer patients evaluated at a large cancer centre.
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Daniel, C R, Shu, X, Ye, Y, Gu, J, Raju, G S, Kopetz, S, and Wu, X
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OBESITY complications ,COLON tumors ,LONGITUDINAL method ,RECTUM tumors ,TUMOR classification ,BODY mass index - Abstract
Background: In contrast to the consistent evidence for obesity and colorectal cancer (CRC) risk, the impact of obesity in CRC patients is less clear. In a well-characterised cohort of CRC patients, we prospectively evaluated class I and class II obesity with survival outcomes.Methods: The CRC patients (N=634) were followed from the date of diagnosis until disease progression/first recurrence (progression-free survival (PFS)) or death (overall survival (OS)). Body mass index (BMI) was calculated from reported usual weight prior to diagnosis. Hazard ratios (HRs) and 95% confidence intervals (CIs) were estimated in models adjusted for clinicopathologic, treatment, and lifestyle factors.Results: Over a median follow-up of 4 years, 208 (33%) patients died and 235 (37%) recurred or progressed. Class II obesity, as compared with either overweight or normal weight, was associated with an increased risk of death (HR and 95% CI: 1.55 (0.97-2.48) and 1.65 (1.02-2.68), respectively), but no clear association was observed with PFS. In analyses restricted to patients who presented as stages I-III, who reported stable weight, or who were aged <50 years, obesity was associated with a significant two- to five-fold increased risk of death.Conclusions: In CRC patients evaluated at a large cancer centre, severely obese patients experienced worse survival outcomes independent of many other factors. [ABSTRACT FROM AUTHOR]- Published
- 2016
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6. KRAS mutation in colorectal cancer metastases after adjuvant FOLFOX for the primary
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Vauthey, J-N, primary, Kopetz, S, additional, Aloia, T A, additional, and Andreou, A, additional
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- 2012
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7. Immunophenotype and molecular characterisation of adenocarcinoma of the small intestine
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Overman, M J, primary, Pozadzides, J, additional, Kopetz, S, additional, Wen, S, additional, Abbruzzese, J L, additional, Wolff, R A, additional, and Wang, H, additional
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- 2009
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8. A phase II study of UFT with leucovorin administered as a twice daily schedule in the treatment of patients with metastatic colorectal cancer
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Hoff, P M, primary, Kopetz, S, additional, Thomas, M B, additional, Langleben, A, additional, Rinaldi, D, additional, Anthony, L, additional, Wolff, R A, additional, Lassere, Y, additional, and Abbruzzese, J L, additional
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- 2008
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9. Association between KRAS mutation and lung metastasis in advanced colorectal cancer.
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Pereira, A A L, Rego, J F M, Morris, V, Overman, M J, Eng, C, Garrett, C R, Boutin, A T, Ferrarotto, R, Lee, M, Jiang, Z-Q, Hoff, P M, Vauthey, J-N, Vilar, E, Maru, D, and Kopetz, S
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COLON cancer ,METASTASIS ,LUNG abnormalities ,GENETIC mutation ,SURGICAL excision - Abstract
Background:KRAS mutations have been associated with lung metastases at diagnosis of metastatic colorectal cancer (mCRC), but the impact of this mutation on subsequent development of lung metastasis is unknown. We investigated KRAS mutation as a predictor of lung metastasis development.Methods:We retrospectively evaluated data from patients with mCRC whose tumour was tested for KRAS mutation from 2008 to 2010. The relationships of KRAS mutational status with time-to-lung metastasis (TTLM) and overall survival (OS) were analysed.Results:Of the 494 patients identified, 202 (41%) had tumours with KRAS mutation. KRAS mutations were associated with a shorter TTLM (median 15.2 vs 22.4 months; hazard ratio=1.40; P=0.002) and a two-fold greater odds of developing lung metastases during the disease course in patients with liver-limited mCRC at diagnosis (72 vs 56%, P=0.007). Overall survival did not differ by KRAS status.Conclusions:Lung metastasis was more likely to develop during the disease course in patients whose tumour had a KRAS mutation than in those whose tumour did not have a KRAS mutation. This finding may have an impact on decision making for surgical resection of metastatic disease. [ABSTRACT FROM AUTHOR]
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- 2015
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10. The requirement for freshly isolated human colorectal cancer (CRC) cells in isolating CRC stem cells.
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Fan, F, Bellister, S, Lu, J, Ye, X, Boulbes, D R, Tozzi, F, Sceusi, E, Kopetz, S, Tian, F, Xia, L, Zhou, Y, Bhattacharya, R, and Ellis, L M
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GENETICS of colon cancer ,CANCER cells ,CANCER stem cells ,GENETIC markers ,ALDEHYDE dehydrogenase ,XENOGRAFTS - Abstract
Background:Isolation of colorectal cancer (CRC) cell populations enriched for cancer stem cells (CSCs) may facilitate target identification. There is no consensus regarding the best methods for isolating CRC stem cells (CRC-SCs). We determined the suitability of various cellular models and various stem cell markers for the isolation of CRC-SCs.Methods:Established human CRC cell lines, established CRC cell lines passaged through mice, patient-derived xenograft (PDX)-derived cells, early passage/newly established cell lines, and cells directly from clinical specimens were studied. Cells were FAC-sorted for the CRC-SC markers CD44, CD133, and aldehyde dehydrogenase (ALDH). Sphere formation and in vivo tumorigenicity studies were used to validate CRC-SC enrichment.Results:None of the markers studied in established cell lines, grown either in vitro or in vivo, consistently enriched for CRC-SCs. In the three other cellular models, CD44 and CD133 did not reliably enrich for stemness. In contrast, freshly isolated PDX-derived cells or early passage/newly established CRC cell lines with high ALDH activity formed spheres in vitro and enhanced tumorigenicity in vivo, whereas cells with low ALDH activity did not.Conclusions:PDX-derived cells, early passages/newly established CRC cell lines and cells from clinical specimen with high ALDH activity can be used to identify CRC-SC-enriched populations. Established CRC cell lines should not be used to isolate CSCs. [ABSTRACT FROM AUTHOR]
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- 2015
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11. Immunophenotype and molecular characterisation of adenocarcinoma of the small intestine.
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Overman, M. J., Pozadzides, J., Kopetz, S., Wen, S., Abbruzzese, J. L., Wolff, R. A., and Wang, H.
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GENETIC transcription ,IMMUNOPHENOTYPING ,ADENOCARCINOMA ,ENTEROCLYSIS ,ONCOGENIC viruses ,MICROSATELLITE repeats ,HOMEOBOX genes ,CELL receptors ,COMPARATIVE studies ,DEGENERATION (Pathology) ,DNA ,EPIDERMAL growth factor ,GENES ,RESEARCH methodology ,MEDICAL cooperation ,ONCOGENES ,PHOSPHATASES ,PROTEINS ,RESEARCH ,JEJUNUM tumors ,DUODENAL tumors ,EVALUATION research ,ILEUM ,OLIGONUCLEOTIDE arrays ,GENE expression profiling ,KAPLAN-Meier estimator ,TUMORS - Abstract
Background: Despite having a dramatically larger surface area than the large intestine, the small intestine is an infrequent site for the development of adenocarcinoma. To better understand the molecular abnormalities in small bowel adenocarcinoma (SBA), we characterised a number of candidate oncogenic pathways and the immunophenotype of this rare cancer.Methods: Tissue microarrays were constructed from tumour samples from 54 patients with all stages of the disease. Immunohistochemistry and microsatellite instability (MSI) testing were conducted.Results: The profile of cytokeratin 20 and 7 coexpression was variable, but expression of caudal type homeobox transcription factor 2 (CDX2) was present in 70% of cases. In this young population (median age 54 years), loss of mismatch repair (MMR) proteins occurred in 35% of patients, with confirmed MSI in 100% of tested cases. Expression of vascular endothelial growth factor-A (VEGF-A) and epidermal growth factor receptor (EGFR) was common, occurring in 96 and 71% of patients, respectively. Only one case showed HER2 expression and none showed loss of phosphatase and tensin homologue mutated on chromosome 10 (PTEN).Conclusions: These results suggest that alterations in DNA MMR pathways are common in SBAs, similar to what is observed in large bowel adenocarcinomas. Furthermore, the high percentage of tumours expressing both EGFR and VEGF suggests that patients with this rare cancer may benefit from therapeutic strategies targeting EGFR and VEGF receptor (VEGFR). [ABSTRACT FROM AUTHOR]- Published
- 2010
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12. Consensus molecular subtyping of metastatic colorectal cancer expands biomarker-directed therapeutic benefit for patients with CMS1 and CMS2 tumors.
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Chowdhury S, Xiu J, Ribeiro JR, Nicolaides T, Zhang J, Korn WM, Poorman KA, Lenz HJ, Marshall JL, Oberley MJ, Sledge GW Jr, Spetzler D, Kopetz S, and Shen JP
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- Humans, Female, Male, Prognosis, Cetuximab therapeutic use, Cetuximab administration & dosage, Panitumumab therapeutic use, Aged, Antibodies, Monoclonal, Humanized therapeutic use, Middle Aged, Kaplan-Meier Estimate, Neoplasm Metastasis, Consensus, Colorectal Neoplasms genetics, Colorectal Neoplasms drug therapy, Colorectal Neoplasms pathology, Biomarkers, Tumor genetics
- Abstract
Background: We developed a whole transcriptome sequencing (WTS)-based Consensus Molecular Subtypes (CMS) classifier using FFPE tissue and investigated its prognostic and predictive utility in a large clinico-genomic database of CRC patients (n = 24,939)., Methods: The classifier was trained against the original CMS datasets using an SVM model and validated in an independent blinded TCGA dataset (88.0% accuracy). Kaplan-Meier estimates of overall survival (OS) and time-on-treatment (TOT) were calculated for each CMS (p < 0.05 considered significant)., Results: CMS2 tumors were enriched on left-side of colon and conferred the longest median OS. In RAS-wildtype mCRC, left-sided tumors and CMS2 classification were associated with longer TOT with anti-EGFR antibodies (cetuximab and panitumumab). When restricting to only CMS2, there was no significant difference in TOT between right- versus left-sided tumors. CMS1 tumors were associated with a longer median TOT with pembrolizumab relative to other CMS groups, even when analyzing only microsatellite stable (MSS) tumors., Discussion: A WTS-based CMS classifier allowed investigation of a large multi-institutional clinico-genomic mCRC cohort, suggesting anti-EGFR therapy benefit for right-sided RAS-WT CMS2 tumors and immune checkpoint inhibitor benefit for MSS CMS1. Routine CMS classification of CRC provides important treatment associations that should be further investigated., (© 2024. The Author(s), under exclusive licence to Springer Nature Limited.)
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- 2024
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13. COLUMBIA-1: a randomised study of durvalumab plus oleclumab in combination with chemotherapy and bevacizumab in metastatic microsatellite-stable colorectal cancer.
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Segal NH, Tie J, Kopetz S, Ducreux M, Chen E, Dienstmann R, Hollebecque A, Reilley MJ, Elez E, Cosaert J, Cain J, Soo-Hoo Y, Hewson N, Cooper ZA, Kumar R, and Tabernero J
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- Humans, Female, Male, Middle Aged, Aged, Adult, Leucovorin administration & dosage, Leucovorin therapeutic use, Leucovorin adverse effects, Fluorouracil administration & dosage, Fluorouracil adverse effects, Organoplatinum Compounds administration & dosage, Organoplatinum Compounds adverse effects, Organoplatinum Compounds therapeutic use, Neoplasm Metastasis, Aged, 80 and over, Colorectal Neoplasms drug therapy, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Antineoplastic Combined Chemotherapy Protocols adverse effects, Antineoplastic Combined Chemotherapy Protocols administration & dosage, Bevacizumab administration & dosage, Bevacizumab adverse effects, Antibodies, Monoclonal administration & dosage, Antibodies, Monoclonal adverse effects, Antibodies, Monoclonal therapeutic use
- Abstract
Background: To determine whether the addition of durvalumab (anti-PD-L1) and oleclumab (anti-CD73) to standard-of-care treatment (FOLFOX and bevacizumab) enhances the anti-tumour effect in patients with metastatic colorectal cancer (mCRC)., Methods: COLUMBIA-1 (NCT04068610) was a Phase Ib (feasibility; Part 1)/Phase II (randomised; Part 2) trial in patients with treatment-naïve microsatellite stable mCRC. Patients in Part 2 were randomised to receive standard-of-care (control arm) or standard-of-care plus durvalumab and oleclumab (experimental arm). Primary objectives included safety and efficacy., Results: Seven patients were enrolled in Part 1 and 52 in Part 2 (n = 26 in each arm). Grade ≥3 treatment-emergent adverse events (TEAE) occurred in 80.8% and 65.4% of patients in the control and experimental arms of Part 2, respectively, with 26.9% and 46.3% experiencing serious TEAEs. The confirmed objective response rate (ORR) was numerically higher in the experimental arm compared with the control arm (61.5% [95% confidence interval (CI), 40.6-79.8] vs 46.2% [95% CI, 26.6-66.6]) but did not meet the statistically significant threshold in either arm., Conclusion: The safety profile of FOLFOX and bevacizumab in combination with durvalumab and oleclumab was manageable; however, the efficacy results do not warrant further development of this combination in patients with microsatellite stable mCRC., Registration: NCT04068610., (© 2024. The Author(s).)
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- 2024
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14. Targeted exome-based predictors of patterns of progression of colorectal liver metastasis after percutaneous thermal ablation.
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Paolucci I, Lin YM, Kawaguchi Y, Maki H, Jones AK, Calandri M, Kopetz S, Newhook TE, Brock KK, Vauthey JN, and Odisio BC
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- Humans, Retrospective Studies, Exome, Proportional Hazards Models, Treatment Outcome, Colorectal Neoplasms genetics, Colorectal Neoplasms surgery, Colorectal Neoplasms pathology, Liver Neoplasms genetics, Liver Neoplasms surgery, Liver Neoplasms pathology
- Abstract
Background: Percutaneous thermal ablation is a curative-intent locoregional therapy (LRT) for selected patients with unresectable colorectal liver metastasis (CLM). Several factors have been identified that contribute to local tumour control after ablation. However, factors contributing to disease progression outside the ablation zone after ablation are poorly understood., Methods: In this retrospective study, using next-generation sequencing, we identified genetic biomarkers associated with different patterns of progression following thermal ablation of CLM., Results: A total of 191 ablation naïve patients between January 2011 and March 2020 were included in the analysis, and 101 had genomic profiling available. Alterations in the TGFβ pathway were associated with increased risk of development of new intrahepatic tumours (hazard ratio [HR], 2.75, 95% confidence interval [95% CI] 1.39-5.45, P = 0.004); and alterations in the Wnt pathway were associated with increased probability of receiving salvage LRT for any intrahepatic progression (HR, 5.8, 95% CI 1.94-19.5, P = 0.003)., Conclusions: Our findings indicate that genomic alterations in cancer-related signalling pathways can predict different progression patterns and the likelihood of receiving salvage LRT following percutaneous thermal ablation of CLM., (© 2022. The Author(s), under exclusive licence to Springer Nature Limited.)
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- 2023
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15. Signet ring cell colorectal cancer: genomic insights into a rare subpopulation of colorectal adenocarcinoma.
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Korphaisarn K, Morris V, Davis JS, Overman MJ, Fogelman DR, Kee BK, Dasari A, Raghav KPS, Shureiqi I, Trupti M, Wolff RA, Eng C, Menter DG, Hamilton S, and Kopetz S
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- Adenocarcinoma drug therapy, Adenocarcinoma genetics, Adolescent, Adult, Aged, Aged, 80 and over, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Carcinoma, Signet Ring Cell drug therapy, Carcinoma, Signet Ring Cell genetics, Colorectal Neoplasms drug therapy, Colorectal Neoplasms genetics, DNA Methylation, Female, Follow-Up Studies, Humans, Liver Neoplasms drug therapy, Liver Neoplasms genetics, Liver Neoplasms secondary, Lung Neoplasms drug therapy, Lung Neoplasms genetics, Lung Neoplasms secondary, Male, Middle Aged, Peritoneal Neoplasms drug therapy, Peritoneal Neoplasms genetics, Peritoneal Neoplasms secondary, Prognosis, Retrospective Studies, Survival Rate, Young Adult, Adenocarcinoma pathology, Biomarkers, Tumor genetics, Carcinoma, Signet Ring Cell pathology, Colorectal Neoplasms pathology, Gene Expression Regulation, Neoplastic, Genomics methods, Mutation
- Abstract
Background: Signet ring cell carcinoma (SRCC) is a rare subtype of colorectal cancer (CRC). The aim of this study was to characterise the genomic alterations and outcomes of SRCC., Methods: Medical records of metastatic CRC (mCRC) patients whose tumours were evaluated by NGS analysis were reviewed. SC-mCRC were classified into two groups: SRCC (>50% signet ring cells) and adenocarcinoma (AC) with SC component (≤50% signet ring cells)., Results: Six hundred and sixty-five mCRC patients were included. Of the 93 mCRC cases with SC features, 63 had slides for review. Of those 63 cases, 35 were confirmed SRCC, and 28 were AC with SC component. Compared with AC group, KRAS and PIK3CA mutations (mts) were found in only 11% (OR: 0.13) and 3% (OR: 0.15) of SRCC cases, respectively. In contrast to the 44% rate of APC mts in AC group, only 3% of SRCC patients had APC mts (OR = 0.04)., Conclusions: SRCC has distinct molecular features, including low rates of KRAS, PIK3CA and APC mts. Further study to identify activation pathways and potential therapeutic targets are needed.
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- 2019
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16. Circulating inflammation signature predicts overall survival and relapse-free survival in metastatic colorectal cancer.
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Varkaris A, Katsiampoura A, Davis JS, Shah N, Lam M, Frias RL, Ivan C, Shimizu M, Morris J, Menter D, Overman M, Tran H, Heymach J, Chun YS, Vauthey JN, Calin G, and Kopetz S
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- Biomarkers, Tumor blood, Biomarkers, Tumor genetics, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology, Disease-Free Survival, Female, Gene Expression Regulation, Neoplastic genetics, Humans, Inflammation genetics, Inflammation pathology, Interleukin-6 genetics, Interleukin-8 genetics, Male, MicroRNAs genetics, Middle Aged, Neoplasm Metastasis, Neoplasm Recurrence, Local blood, Neoplasm Recurrence, Local pathology, Prognosis, Recurrence, Colorectal Neoplasms blood, Inflammation blood, Interleukin-6 blood, Interleukin-8 blood, MicroRNAs blood
- Abstract
Background: Metastatic colorectal cancer (mCRC) is a highly heterogeneous disease from a clinical, molecular, and immunological perspective. Current predictive models rely primarily in tissue based genetic analysis, which not always correlate with inflammatory response. Here we evaluated the role of a circulating inflammatory signature as a prognostic marker in mCRC., Methods: Two hundred eleven newly diagnosed patients with mCRC were enrolled in the study. One hundred twenty-one patients had unresectable metastases, whereas ninety patients had potentially resectable liver metastases at presentation. Analysis of miR-21, IL-6, and IL-8 in the plasma of peripheral blood was performed at baseline. Patients with high circulating levels of ≥2 of the three inflammation markers (miR-21, IL-6, and IL-8) were considered to have the "Inflammation phenotype-positive CISIG"., Results: Positive CISIG was found in 39/90 (43%) and 50/121 (45%) patients in the resectable and unresectable cohort, respectively. In the resectable population the median relapse-free survival was 18.4 compared to 31.4 months (p = 0.001 HR 2.09, 95% CI 1.2-3.67) for positive vs. negative CISIG. In contrast, the individual components were not significant. In the same population the median overall survival was 46.2 compared to 66.0 months (p = 0.0003, HR 2.57, 95% CI 1.26-5.27) for positive vs. negative CISIG, but not significant for the individual components. In the unresectable population, the median overall survival was 13.5 compared to 25.0 months (p = 0.0008, HR 2.49, 95% CI 1.46-4.22) for positive vs. negative CISIG. IL-6 was independently prognostic with overall survival of 16.2 compared to 27.0 months (p = 0.004, HR 1.96, 95% CI 1.24-3.11) for high vs. low IL-6, but not the other components. Using a Cox regression model, we demonstrated that CISIG is an independent predictive marker of survival in patients with unresectable disease (HR 1.8, 95% CI 1.2, 2.8, p < 0.01)., Conclusion: In two different cohorts, we demonstrated that CISIG is a strong prognostic factor of relapse-free and overall survival of patients with mCRC. Based on these data, analysis of circulating inflammatory signaling can be complimentary to traditional molecular testing.
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- 2019
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17. Association of CpG island methylator phenotype and EREG/AREG methylation and expression in colorectal cancer.
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Lee MS, McGuffey EJ, Morris JS, Manyam G, Baladandayuthapani V, Wei W, Morris VK, Overman MJ, Maru DM, Jiang ZQ, Hamilton SR, and Kopetz S
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- Amphiregulin biosynthesis, Cohort Studies, Colorectal Neoplasms drug therapy, Colorectal Neoplasms pathology, Epiregulin biosynthesis, ErbB Receptors antagonists & inhibitors, HCT116 Cells, Humans, Male, Phenotype, Promoter Regions, Genetic, Proto-Oncogene Proteins p21(ras) biosynthesis, Proto-Oncogene Proteins p21(ras) genetics, Amphiregulin genetics, Colorectal Neoplasms genetics, Colorectal Neoplasms metabolism, CpG Islands, DNA Methylation, Epiregulin genetics
- Abstract
Background: High EREG and AREG expression, and left-sided primary tumours are associated with superior efficacy of anti-epidermal growth factor receptor (EGFR) therapy in metastatic colorectal cancer (CRC), but a unifying explanation of these findings is lacking., Methods: RNA-seq, gene expression arrays, and DNA methylation profiling were completed on 179 CRC tumours. Results were validated using independent The Cancer Genome Atlas data sets. An independent cohort of 198 KRAS wild-type metastatic CRC tumours was tested for CpG island methylator phenotype (CIMP) status, and progression-free survival (PFS) with the first anti-EGFR regimen was retrospectively determined., Results: EREG and AREG expression was highly inversely correlated with methylation and was inversely associated with right-sided primary tumour, BRAF mutation, and CIMP-high status. Treatment of CRC cell lines with hypomethylating agents decreased methylation and increased expression of EREG. Inferior PFS with anti-EGFR therapy was associated with CIMP-high status, BRAF mutation, NRAS mutation, and right-sided primary tumour on univariate analysis. Among known BRAF/NRAS wild-type tumours, inferior PFS remained associated with CIMP-high status (median PFS 5.6 vs 9.0 mo, P=0.023)., Conclusions: EREG and AREG are strongly regulated by methylation, and their expression is associated with CIMP status and primary tumour site, which may explain the association of primary tumour site and EREG/AREG expression with anti-EGFR therapy efficacy.
- Published
- 2016
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