1. Ab-initio and experimental study of pentose sugar dehydration mechanism in the gas phase
- Author
-
Federico Pepi, Lorenzo Antonini, Andreina Ricci, Pierluigi Giacomello, Anna Troiani, B. Di Rienzo, Chiara Salvitti, Rino Ragno, Alexandros Patsilinakos, Stefania Garzoli, Antonini, L., Garzoli, S., Ricci, A., Troiani, A., Salvitti, C., Giacomello, P., Ragno, R., Patsilinakos, A., Di Rienzo, B., and Pepi, F.
- Subjects
Ribose ,Pentoses ,Ab initio ,Ionic bonding ,Activation energy ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Mass Spectrometry ,Analytical Chemistry ,Bioma ,medicine ,Gas phase dehydration ,Molecule ,Dehydration ,Sugar ,Xylose ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,General Medicine ,biomass ,xylose ,ribose ,arabinose ,gas phase dehydration ,mass spectrometry ,medicine.disease ,Arabinose ,Transition state ,0104 chemical sciences ,Dehydration reaction ,Mass spectrum ,Physical chemistry ,Sugars ,Pentose - Abstract
In this work pentose sugar (D-xylose, D-ribose and D-arabinose) gas phase dehydration reaction was investigated by means of mass spectrometric techniques and theoretical calculations. The ionic species derived from the dehydration reaction of protonated D-ribose and D-arabinose were structurally characterized by their fragmentation patterns and the relative dehydration energies measured by energy resolved CAD mass spectra. The results were compared with those recently obtained for D-xylose in the same mass spectrometric experimental conditions. Dehydration of C1-OH protonated sugars was theoretically investigated at the CCSD(T)/cc-pVTZ//M11/6-311++G(2d,2p) level of theory. Protonated pentoses are not stable and promptly lose a water molecule giving rise to the dehydrated ions at m/z 133. D-xylose, D-ribose and D-arabinose dehydration follows a common reaction pathway with ionic intermediates and transition states characterized by similar structures. Slightly different dehydration energies were experimentally measured and the relative trend was theoretically confirmed. The overall dehydration activation energy follows the order arabinose < ribose < xylose. Gas-phase pentose sugar dehydration leads to the formation of protonated 2-furaldehyde as final product. Based on the experimental and theoretical evidence a new mechanistic hypothesis starting from C1-OH protonation was proposed.
- Published
- 2018
- Full Text
- View/download PDF