1. Gamma-radiation sensitivity and polymorphisms in RAD51L1 modulate glioma risk
- Author
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Qingyi Wei, Georgina Armstrong, Randa El-Zein, Yanhong Liu, Sanjay Shete, Kenneth Aldape, Li E. Wang, Spyros Tsavachidis, Xifeng Wu, Mark R. Gilbert, Carol J. Etzel, Fu Wen Liang, Melissa L. Bondy, and Jinliang Xing
- Subjects
Adult ,Male ,Risk ,endocrine system ,Cancer Research ,medicine.medical_specialty ,Linkage disequilibrium ,Single-nucleotide polymorphism ,Biology ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,Radiation sensitivity ,Molecular genetics ,Genotype ,medicine ,Humans ,DNA Breaks, Double-Stranded ,Allele ,Gene ,Aged ,Genetics ,Molecular Epidemiology ,Brain Neoplasms ,Haplotype ,food and beverages ,Glioma ,General Medicine ,Middle Aged ,DNA-Binding Proteins ,Haplotypes ,Gamma Rays ,Female - Abstract
Background: DNA strand breaks pose the greatest threat to genomic stability. Genetically determined mutagen sensitivity predisposes individuals to a variety of cancers, including glioma. However, polymorphisms in DNA strand break repair genes that may determine mutagen sensitivity are not well studied in cancer risk, especially in gliomas. Methods: We correlated genotype data for tag single-nucleotide polymorphisms (tSNPs) of DNA strand break repair genes with a gamma-radiation-induced mutagen sensitivity phenotype [expressed as mean breaks per cell (B/C)] in samples from 426 glioma patients. We also conducted analysis to assess joint and haplotype effects of single-nucleotide polymorphisms (SNPs) on mutagen sensitivity. We further validate our results in an independent external control group totaling 662 subjects. Results: Of the 392 tSNPs examined, we found that mutagen sensitivity was modified by one tSNP in the EME2 gene and six tSNPs in the RAD51L1 gene (P < 0.01). Among the six RAD51L1 SNPs tested in the validation set, one (RAD51L1 rs2180611) was significantly associated with mutagen sensitivity (P = 0.025). Moreover, we found a significant dose–response relationship between the mutagen sensitivity and the number of adverse tSNP genotypes. Furthermore, haplotype analysis revealed that RAD51L1 haplotypes F-A (zero adverse allele) and F-E (six adverse alleles) exhibited the lowest (0.42) and highest (0.93) mean B/C values, respectively. A similar dose–response relationship also existed between the mutagen sensitivity and the number of adverse haplotypes. Conclusion: These results suggest that polymorphisms in and haplotypes of the RAD51L1 gene, which is involved in the double-strand break repair pathway, modulate gamma-radiation-induced mutagen sensitivity.
- Published
- 2010
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