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Climate change and hydrologic process response in the Tarim River Basin over the past 50 years are the tocus of more and more researchers' attention. In this paper, both temperature and precipitation time series were found to present a monotonic increasing trend using nonparametric tests. Noticeably, a significant step change in both temperature and precipitation time series occurred in 1986. By contrasting the trends of natural water process in headstream and mainstream, we found that it was anthropogenic activities not climate change that caused the river dried up and vegetation degenerated in the lower reaches of Tarim River. The results of gray correlation analysis show that the runoff of higher latitude distributing river is more closely associated with winter snow stocking, while that of lower latitude is more closely related to summer temperature. Runoff in the headstream is more sensitive to precipitation, while that in the mainstream is more sensitive to evaporation. The strong evaporation caused by increasing temperature weakened runoff to some extent in spite of the fact that precipitation increased over the past 50 years. [ABSTRACT FROM AUTHOR]