5 results on '"Lim, Chun Yee"'
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2. Linearity assessment: deviation from linearity and residual of linear regression approaches.
- Author
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Lim CY, Lee X, Tran MTC, Markus C, Loh TP, Ho CS, Theodorsson E, Greaves RF, Cooke BR, and Zakaria R
- Abstract
In this computer simulation study, we examine four different statistical approaches of linearity assessment, including two variants of deviation from linearity (individual (IDL) and averaged (AD)), along with detection capabilities of residuals of linear regression (individual and averaged). From the results of the simulation, the following broad suggestions are provided to laboratory practitioners when performing linearity assessment. A high imprecision can challenge linearity investigations by producing a high false positive rate or low power of detection. Therefore, the imprecision of the measurement procedure should be considered when interpreting linearity assessment results. In the presence of high imprecision, the results of linearity assessment should be interpreted with caution. Different linearity assessment approaches examined in this study performed well under different analytical scenarios. For optimal outcomes, a considered and tailored study design should be implemented. With the exception of specific scenarios, both ADL and IDL methods were suboptimal for the assessment of linearity compared. When imprecision is low (3 %), averaged residual of linear regression with triplicate measurements and a non-linearity acceptance limit of 5 % produces <5 % false positive rates and a high power for detection of non-linearity of >70 % across different types and degrees of non-linearity. Detection of departures from linearity are difficult to identify in practice and enhanced methods of detection need development., (© 2024 Walter de Gruyter GmbH, Berlin/Boston.)
- Published
- 2024
- Full Text
- View/download PDF
3. Lot-to-lot variation and verification.
- Author
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Loh TP, Markus C, Tan CH, Tran MTC, Sethi SK, and Lim CY
- Subjects
- Humans, Quality Control, Laboratories, Reagent Kits, Diagnostic, Chemistry, Clinical
- Abstract
Lot-to-lot verification is an integral component for monitoring the long-term stability of a measurement procedure. The practice is challenged by the resource requirements as well as uncertainty surrounding experimental design and statistical analysis that is optimal for individual laboratories, although guidance is becoming increasingly available. Collaborative verification efforts as well as application of patient-based monitoring are likely to further improve identification of any differences in performance in a relatively timely manner. Appropriate follow up actions of failed lot-to-lot verification is required and must balance potential disruptions to clinical services provided by the laboratory. Manufacturers need to increase transparency surrounding release criteria and work closer with laboratory professionals to ensure acceptable reagent lots are released to end users. A tripartite collaboration between regulatory bodies, manufacturers, and laboratory medicine professional bodies is key to developing a balanced system where regulatory, manufacturing, and clinical requirements of laboratory testing are met, to minimize differences between reagent lots and ensure patient safety. Clinical Chemistry and Laboratory Medicine has served as a fertile platform for advancing the discussion and practice of lot-to-lot verification in the past 60 years and will continue to be an advocate of this important topic for many more years to come., (© 2022 Walter de Gruyter GmbH, Berlin/Boston.)
- Published
- 2022
- Full Text
- View/download PDF
4. Performance of four regression frameworks with varying precision profiles in simulated reference material commutability assessment.
- Author
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Markus C, Tan RZ, Lim CY, Rankin W, Matthews SJ, Loh TP, and Hague WM
- Subjects
- Humans, Reference Standards
- Abstract
Objectives: One approach to assessing reference material (RM) commutability and agreement with clinical samples (CS) is to use ordinary least squares or Deming regression with prediction intervals. This approach assumes constant variance that may not be fulfilled by the measurement procedures. Flexible regression frameworks which relax this assumption, such as quantile regression or generalized additive models for location, scale, and shape (GAMLSS), have recently been implemented, which can model the changing variance with measurand concentration., Methods: We simulated four imprecision profiles, ranging from simple constant variance to complex mixtures of constant and proportional variance, and examined the effects on commutability assessment outcomes with above four regression frameworks and varying the number of CS, data transformations and RM location relative to CS concentration. Regression framework performance was determined by the proportion of false rejections of commutability from prediction intervals or centiles across relative RM concentrations and was compared with the expected nominal probability coverage., Results: In simple variance profiles (constant or proportional variance), Deming regression, without or with logarithmic transformation respectively, is the most efficient approach. In mixed variance profiles, GAMLSS with smoothing techniques are more appropriate, with consideration given to increasing the number of CS and the relative location of RM. In the case where analytical coefficients of variation profiles are U-shaped, even the more flexible regression frameworks may not be entirely suitable., Conclusions: In commutability assessments, variance profiles of measurement procedures and location of RM in respect to clinical sample concentration significantly influence the false rejection rate of commutability., (© 2022 Walter de Gruyter GmbH, Berlin/Boston.)
- Published
- 2022
- Full Text
- View/download PDF
5. Comparison of six regression-based lot-to-lot verification approaches.
- Author
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Koh NWX, Markus C, Loh TP, and Lim CY
- Subjects
- Bias, Computer Simulation, Humans, Indicators and Reagents, Laboratories
- Abstract
Objectives: Detection of between-lot reagent bias is clinically important and can be assessed by application of regression-based statistics on several paired measurements obtained from the existing and new candidate lot. Here, the bias detection capability of six regression-based lot-to-lot reagent verification assessments, including an extension of the Bland-Altman with regression approach are compared., Methods: Least squares and Deming regression (in both weighted and unweighted forms), confidence ellipses and Bland-Altman with regression (BA-R) approaches were investigated. The numerical simulation included permutations of the following parameters: differing result range ratios (upper:lower measurement limits), levels of significance (alpha), constant and proportional biases, analytical coefficients of variation (CV), and numbers of replicates and sample sizes. The sample concentrations simulated were drawn from a uniformly distributed concentration range., Results: At a low range ratio (1:10, CV 3%), the BA-R performed the best, albeit with a higher false rejection rate and closely followed by weighted regression approaches. At larger range ratios (1:1,000, CV 3%), the BA-R performed poorly and weighted regression approaches performed the best. At higher assay imprecision (CV 10%), all six approaches performed poorly with bias detection rates <50%. A lower alpha reduced the false rejection rate, while greater sample numbers and replicates improved bias detection., Conclusions: When performing reagent lot verification, laboratories need to finely balance the false rejection rate (selecting an appropriate alpha) with the power of bias detection (appropriate statistical approach to match assay performance characteristics) and operational considerations (number of clinical samples and replicates, not having alternate reagent lot)., (© 2022 Walter de Gruyter GmbH, Berlin/Boston.)
- Published
- 2022
- Full Text
- View/download PDF
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