1. Microbiome Diversity and Differential Abundances Associated with Gastrointestinal Symptoms, BMI, Immune Markers, and Fecal Short Chain Volatile Fatty Acid Profiles
- Author
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W. Andrew Clark, John Sterrett, Michelle J. Chandley, Sean Fox, Sarah M. Parkinson, and Kaitlyn Webb
- Subjects
chemistry.chemical_classification ,Nutrition and Dietetics ,Nutritional Microbiology/Microbiome ,biology ,Medicine (miscellaneous) ,Fatty acid ,Immune markers ,medicine.disease ,chemistry ,Immunoglobulin g4 ,Immunology ,biology.protein ,medicine ,Microbiome ,Antibody ,Digestion ,Dysbiosis ,Feces ,Food Science - Abstract
OBJECTIVES: The gut microbiota and its metabolites – namely short chain volatile fatty acids (SCVFAs) – interact with the digestive, immune, and nervous systems. States of microbiome dysbiosis are highly associated with obesity and GI symptoms, and profiles of SCVFAs, which serve functions as fuel sources and signaling molecules, mimic this dysbiotic state. This study aimed to further our understanding of associations between bacterial diversity and GI symptoms, BMI, immune markers, and SCVFAs and to identify bacteria differentially abundant with changes to the previously mentioned variables. METHODS: Data (measures of GI distress, BMI, immunoglobulins, fecal proximate analysis, SCVFAs, and 16s RNA sequences) was extracted from a study containing non-celiac gluten-sensitive and control participants. QIIME2 was used to process 16s RNA data, analyze quantitative, qualitative, phylogenetic quantitative, and phylogenetic qualitative measures of alpha and beta diversity and to perform an analysis of composition of microbes (ANCOM) for differential abundances data. RESULTS: Many significant differences were seen, namely in multiple measures of alpha diversity for IgG4 (P
- Published
- 2020
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