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Deep-sea communities are becoming increasingly vulnerable to anthropogenic disturbances, as fishing, hydrocarbon exploration and extraction, and mining activities extend into deeper water. Negative impacts from such activities were recently documented in the Gulf of Mexico (GoM), where the Deepwater Horizon oil spill caused substantial damage to a deep-water octocoral community. Although a faunal checklist and numerous museum records are currently available for the entire GoM, local-scale diversity and assemblage structure of octocoral communities remains unknown, particularly in deep water. On a series of recent cruises (2008–2011) using remotely operated vehicles, 435 octocorals were collected from 33 deep-water sites (250–2500 m) in the northern GoM. To elucidate species boundaries, the extended mitochondrial barcode (COI+igr1+msh) was successfully amplified and sequenced for 422 of these specimens, yielding a total of 64 haplotypes representing at least 52 species. Further, at least 29% of the species collected were either previously not known to occur in the GoM (12 species) or represent new species (at least three species). Overall, species richness at each site was fairly low (1–12 spp.). The greatest species richness occurred at the shallowest (<325 m: GC140, n=8 spp.) and the deepest (2100–2500 m: DC673, n=12 spp., DC583, n=10 spp.) sites, and minimum taxonomic and phylogenetic (Faith's Index) diversity was evident at 600–950 m. This pattern is the opposite of the typical pattern of deep-sea diversity in the GoM, which normally peaks at mid-slope depths. Sorensen's Index of taxonomic β-diversity indicated that six distinct (65–95% dissimilarity) species assemblages corresponded with five depth breaks at ~325, 425, 600, 1100, and 2100 m. Further assemblage structure was observed within certain depth zones. Of note, within the 425–600 m depth range, species assemblages at the West Florida Slope differed from the other sites, corresponding to an established biogeographic barrier. The phylogenetic approach used in this study provided important insights into the species boundaries of many taxa while demonstrating that evolutionary history plays a critical role in community structure of deep-sea octocorals. [ABSTRACT FROM AUTHOR]

Species in the genus Paramuricea are among the most common corals in deep waters (>200 m) of the Gulf of Mexico. Paramuricea spp. increase habitat heterogeneity and provide substrate for numerous faunal associates, including ophiuroids that occur on the majority of coral colonies. In light of the Deepwater Horizon oil spill in the Gulf of Mexico, it has become apparent that there is a critical need for data on population dynamics within this genus. To date, at least one species of Paramuricea (P. biscaya) is known to be negatively impacted by the spill. Using remotely operated vehicles from 2009 to 2011, we documented the density and size frequency distributions of Paramuricea across 21 sites at depths of 250–2500 m. Molecular barcoding (mtCOI+igr+MutS) was used to delineate species boundaries among the specimens collected. Results suggested that seven haplotypes are present in the Gulf, and appear to be partially segregated by depth [(type H: <260 m) (type E: 278–445 m) (type A: 443–541 m) (types B1–B3: 800–2600 m)]. Densities of Paramuricea spp. determined by ROV surveys were mapped onto high-resolution bathymetric data, which confirmed the corals' preference for topographic highs composed of hard substrata. At any one site, densities ranged from 0.043±0.01 (VK906, 380 m) to 1.18±0.81 colonies/m2 (GC852, 1410 m). Mortality and recruitment rates were estimated from size-frequency data combined with estimated growth rates. Mortality rate decreased with size, from approximately 20% and 70% in new recruits of Paramuricea B3 and P. biscaya respectively, to less than 10% in colonies over 40 cm in both species. Recruitment rates were estimated from less than one to over 30 individuals per year per site, but patterns in size-frequency histograms suggest that this process is highly variable at the different sites and at different times. These data illustrate that populations of the slow-growing Paramuricea species are sparsely distributed and exhibit low recruitment rates, making them highly susceptible to anthropogenic threats. [ABSTRACT FROM AUTHOR]

Abstract: Midwater fish faunas over three cold seep habitats >1000m (AC601, GC852, AT340) and over a cold-water coral bank (VK826, <1000m) in the north-central Gulf of Mexico (GOM) are described and compared. Day and night discrete-depth sampling was accomplished at each study site, 9–29 August 2007, using an opening–closing Tucker trawl towed at depth for 30min. The 159 Tucker trawl stations yielded 9802 individuals and at least 126 species (30 families) of juvenile and adult midwater fishes. Myctophidae (38 species, 28% of the total catch), Stomiidae (17 species, 1.4%), Gonostomatidae (12 species, 56%), Sternoptychidae (10 species, 6%), and Phosichthyidae (5 species, 6%) dominated catches at all sites. Thirty-one species (8 families) comprised about 90% of the overall abundance of fishes across the four sites. Despite the wide separation of study sites and some differences in physical oceanography, geographic and temporal patterns in mesopelagic fish assemblages were not evident (ANOSIM, Global R=0.20, p=0.1%, pairwise R values <0.3). However, station groupings were related mostly to similarities in sampled depths (SIMPROF, p<1.5%). Upper water-column station groups (<400m) were typified by Lepidophanes guentheri, Diaphus dumerilii, Vinciguerria nimbaria, Vinciguerria poweriae, Valenciennellus tripunctulatus, Argyropelecus aculeatus, Notolychnus valdiviae, Benthosema suborbitale, Gonostoma elongatum, and Hygophum taaningi. Deeper station groups (mean depth=609m) were typified by Cyclothone alba, Cyclothone acclinidens, Cyclothone braueri, Cyclothone obscura, Cyclothone pallida, Cyclothone pseudopallida, V. tripunctulatus, and Hygophum benoiti. Depth, diel, and size distributions were also analyzed for abundant species. For example, Cyclothone spp., abundant at all sites except VK826, usually occurred in deeper waters (>130m), especially during daylight hours (>335m). Most Cyclothone individuals were captured at night at GC852, whereas catches were more evenly distributed across times at AT340 and VK826. Cyclothone spp. individuals occurred in the deeper parts of the sampled depth range at AT340 and VK826 at all times compared with GC852, where they appeared to undergo a diel migration. The two most abundant Cyclothone spp., C. pallida and C. pseudopallida, had the broadest depth ranges (150–1377m) and exhibited a trend for larger specimens to occur deeper at GC852. Most V. tripunctulatus were captured at night and tended to have larger mean sizes in deeper waters. This species did not exhibit strong diel patterns of vertical distribution. Shallower depths were occupied at night by some individuals at all sites, but most individuals remained somewhat deeper at night at VK826 (350–450m at night and 200–350m by day) and AT340 (200–600m at night and 300–500m by day) compared with GC852 (150–450m at night and 750 and 1000m by day). Nearly all Vinciguerria poweriae were caught at night, and no clear trend of size with depth was apparent. This species occupied a wider depth range at night, with most in the upper 200m. Most myctophids, the strongest diel migrators, were captured at night at the offshore stations. The dominant myctophid, N. valdiviae, was most abundant at GC852 (550–1050m by day and 50–750m at night), but diel movement was more distinct at AT340 (<200m at night and 350–500m by day). No size-related trends with depth were apparent at any site for N. valdiviae, and size distributions were similar among sites. This study and others support the hypothesis that there is a geographically similar mesopelagic fish fauna throughout the GOM. However, the fauna does vary by depth, with some species remaining in deep waters at all times (e.g., Cyclothone spp.) and others occurring at mid-depths and exhibiting varying degrees of diel migration (e.g., many myctophids). Even though faunal composition is similar across the GOM, some species exhibit different movement behaviors at different locations. Such variances could be related to differences in physical or chemical factors, food resources, lunar phase, or bottom depth. [Copyright &y& Elsevier]