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Few studies have examined the movement of adult Pacific salmon Oncorhynchus spp. between the sea and rivers after they have entered a river. In this study, archival tags that recorded temperature and salinity were attached to pink salmon (Oncorhynchus gorbuscha) that had ascended one of four rivers in northern Japan, to examine their individual movement patterns among fresh, brackish, and salt water. Of 44 pink salmon tagged and released in the rivers, nine were recaptured in the same river where they had been tagged and released, four were recaptured in marine nearshore trap fisheries, and one was recaptured in a neighboring river from where it was tagged and released. Among the 14 recaptured tagged fish, abrupt changes in salinity records were found in seven tag records, indicating that tagged fish had returned to brackish or seawater. Six of the seven individuals were males, and the sex ratio was biased toward males when compared with all tag-released individuals. The results suggest that a substantial proportion of homing adult pink salmon may make short-term movements between fresh and saltwater during their spawning migration. Analysis of the tag-recorded water temperatures showed significantly cooler riverine temperatures compared with inferred temperatures of the coastal water (up to 20.5 °C). While many factors, including orienting behavior and male-biased dispersal, likely influenced the observed 'probing' behavior, I speculate that the temporal use of freshwaters rivers may be a thermoregulatory behavior to avoid high, stressful temperatures. Future research relating the short-term movements between fresh water and salt water to local environmental conditions is needed to investigate this hypothesis. [ABSTRACT FROM AUTHOR]

We tested the hypothesis that otolith trace elemental signatures (microchemistries) of mottled sculpin Cottus bairdi, slimy sculpin C. cognatus, and juvenile coho salmon Oncorhynchus kisutch were predictive of those of juvenile steelhead O. mykiss across many sites within the Lake Michigan basin. Laser ablation inductively coupled plasma mass spectrometry was used to generate otolith microchemistry signatures for each individual fish. For each species pair, statistical correlations of mean otolith concentrations of Mg, Mn, Cu, Zn, Sr, Ba, and Pb for each site were estimated. Linear equations describing these relationships were used to transform juvenile steelhead otolith microchemistry data to those of each of the other species. Transformed otolith microchemistry data were subjected to random forest classifications developed for mottled sculpin, slimy sculpin, and juvenile coho salmon to assess interspecific natal source assignment accuracies. Steelhead otolith concentrations of Sr were significantly correlated with those of each of the other species, whereas otolith concentrations of Ba and Mn were significantly correlated among some species pairs, but not others. Natal source assignment accuracies of juvenile steelhead to site and watershed generally decreased when otolith microchemistry data were transformed to those of mottled sculpin, slimy sculpin, and coho salmon. Miss-assigned fish often classified into nearby watersheds within larger hydrologic units, leading to higher assignment accuracies at coarser geographical resolutions (75-97% correct assignment to hydrologic unit for each species). These findings suggest that applications of otolith microchemistry data may extend beyond the species from which they are collected. [ABSTRACT FROM AUTHOR]

In fishes, elevated levels of cortisol in eggs can have carry-over effects on phenotypic and performance traits early in life. How responses to elevations in egg cortisol differ among species remains poorly understood. Using wild populations of chum salmon ( Oncorhynchus keta) and sockeye salmon ( O. nerka), we investigated whether experimentally-elevated concentrations of cortisol in newly fertilized eggs had effects on offspring morphology and/or burst swimming capacity. Immediately following fertilization, eggs were incubated for 2 h with water dosed with 0 ng/mL or 1000 ng/mL of cortisol. Embryos were reared to the fry life stage (complete yolk sac absorption). Morphology and burst swimming performance of fry were then assessed. Sockeye salmon fry reared from cortisol-treated eggs were smaller overall (i.e., smaller body, fins and eyes) compared to conspecifics reared from untreated eggs. In contrast, the morphology of chum salmon fry was not affected by the experimental elevation of egg cortisol. In both species, burst swimming duration was unaffected by egg cortisol treatment, while offspring reared from the cortisol-treated eggs initiated fewer bouts of burst swimming. Our results demonstrate that closely-related species can respond differently to elevations in egg cortisol, and not all offspring traits may be affected by these elevations in cortisol. Further efforts to establish links among offspring quality, maternal stress, and egg composition need to consider the potential for divergent responses among species and examine multiple measures of phenotype and performance throughout development. [ABSTRACT FROM AUTHOR]

Seasonal, ontogenetic, and diel variations in the diets of chum salmon, Oncorhynchus keta, were examined by analyzing the stomach contents of 1398 fish (300-755 mm fork length) collected in the Bering Sea during summer and early autumn of 2002. Whereas mesozooplankton, including euphausiids, hyperiids, and gastropods, constituted the greatest portion of the stomach contents during the summer, forage fishes ( Stenobrachius leucopsarus and Atka mackerel, Pleurogrammus monopterygius) were the most important items during early autumn. Although no apparent diel trend was found in feeding intensity, distinct diel differences in prey composition were observed. Chum salmon caught in the morning contained Stenobrachius leucopsarus, whereas those caught in the afternoon had mainly fed on euphausiids. Thus, chum salmon diets change temporally because of changes in prey availability that result from differences in the annual life cycles and diurnal vertical migrations of prey species. [ABSTRACT FROM AUTHOR]

We tracked the movements of ten small (SL = 25.5–31.0 cm) and ten large (SL = 32.0–38.5 cm) radio-tagged domestic rainbow trout ( Oncorhynchus mykiss) in response to frequent pulsed releases of water in the South Fork American River (California) from July to October 2005. In week one all the small trout moved less than 1 km upstream or downstream of their release sites. Four small trout moved 1–3 km upstream or downstream of their release sites in the following 8 weeks. Seven out of ten large trout moved downstream after their release. In subsequent weeks most large trout showed smaller upstream and downstream movements, and were observed between 1 km upstream and 8 km downstream of their release sites. Our results suggest that domestic rainbow trout with SL > 25 cm are not forced downstream by daily pulsed flow increases from 5 to over 40 ms. [ABSTRACT FROM AUTHOR]

We developed models to predict the effect of water velocity on prey capture rates and on optimal foraging velocities of two sympatric juvenile salmonids, coho salmon and steelhead. Mean fish size was ~80 mm, the size of age I+ coho and steelhead during their second summer in Southeast Alaska streams, when size overlap suggests that competition might be strongest. We used experimentally determined prey capture probabilities to estimate the effect of water velocity on gross energy intake rates, and we modeled prey capture costs using experimental data for search and handling times and published models of swimming costs. We used the difference between gross energy intake and prey capture costs to predict velocities at which each species maximized net energy intake rate. Predicted prey capture rates for both species declined from ~75 to 30–40 prey/h with a velocity increase from 0.30 to 0.60 m·s−1. We found little difference between coho and steelhead in predicted optimum foraging velocities (0.29 m·s−1 for coho and 0.30 m·s−1 for steelhead). Although prey capture ability appears to be more important than are prey capture costs in determining optimum foraging velocities, capture costs may be important for models that predict fish growth. Because coho are assumed to pay a greater swimming cost due to a less hydrodynamic body form, we also modeled 10 and 25% increases in hydrodynamic drag to assess the effect of increased prey capture costs. This reduced optimum velocity by 0 and 0.01 m∙s−1, respectively. Habitat segregation among equal-sized coho and steelhead does not appear to be related to the effects of water velocity on their respective foraging abilities. [ABSTRACT FROM AUTHOR]

We report the finding of an established population of exotic Chinook salmon spawning in headwaters of the Santa Cruz River system (Argentina), the first for this species in an Atlantic basin of South America. Spawning takes place in the Caterina River, a small tributary of Lake Argentino, located 488.5 km from the ocean. Anadromy was verified by correspondence of N and C stable isotope ratios with those of fish captured by bottom-trawlers in the ocean and those of anadromous rainbow trout from the same river basin. The scale patterns of most fish examined were consistent with a stream-type life cycle (i.e., seaward migration by juveniles after a full year in fresh water). Two potential origins were identified for this population: in situ introductions of fish imported directly from the USA in the early 20th century or fish from two ranching experiments conducted in southern Chile during the 1980s. In the latter case, colonization would have proceeded through the Strait of Magellan, helped by prevailing eastward currents. [ABSTRACT FROM AUTHOR]

Anadromous salmonid females exhibit indicators of mate choice based on male size. Direct benefits to females of mating with larger males have not been identified for semelparous Pacific salmon,Oncorhynchusspp. We tested the null hypothesis that females forced to spawn naturally in a stream channel and artificially (gametes removed manually) with males about half their body mass would experience egg fertilization rates similar to that of females forced to spawn with males of about equal mass. Fertilization rates did not differ significantly between large- and small-male pairs. The fertilization rates were also very similar for eggs deposited naturally and those that we fertilized artificially. Therefore, fertilization success does not appear to be the mechanism responsible for female mate choice based on male size. Benefits of females mating with larger males probably have only indirect (i.e., genetic) benefits to a female’s offspring, as suggested by previous authors. [ABSTRACT FROM AUTHOR]

DNA sequence data was collected for the C and D introns in the duplicate growth hormone loci (GH1 and GH2) from Brachmystax lenok, two subspecies of Hucho hucho, Hucho (Parahucho) perryi, Salmo salar, Salmo trutta, Acantholingua ohridana (Salmothymus), six species of Salvelinus, eight species of Oncorhynchus including O. masou, and three outgroups including Thymallus thymallus, Coregonus artedi, and Coregonus clupeaformis. Phylogenetic analyses were performed using maximum parsimony and maximum likelihood (PAUP, version 4.08beta) with gaps as missing data and as a fifth base. B. lenok was basal in all of the trees and all of the other genera were monophyletic with the exception that A. ohridana always placed within Salmo, and H. hucho sp. often placed with B. lenok. The GH1 introns supported a sister relationship between Oncorhynchus and Salvelinus, while the combined GH2 introns were ambiguous at this node. This result contrasts with trees based on morphology and the ribosomal ITS1 sequences that support a sister relationship between Salmo and Oncorhynchus. The only estrogen response element (ERE) in the gene is found in the C intron and has mutated in GH2 in all of the species except B. lenok. The ERE element in GH1 has undergone another mutation in all of the species except for B. lenok, and members of the two genera Salvelinus and Oncorhynchus. Thus these latter two genera are the only ones with a difference in expression of GH1 and GH2 in the presence of estrogen. Differences in selective pressure on the introns in the duplicate genes in different taxa could account for the conflicting results obtained in the phylogenetic analysis. [ABSTRACT FROM AUTHOR]

We tested signals of historical reductions in effective population size within populations of sockeye salmon Oncorhynchus nerka returning to Bristol Bay, Alaska, to examine the roles that ecotype, migration obstacles, and drainage might play in the highly variable production of the Kvichak River drainage. We collected data for eight microsatellite loci from ∼100 fish at each of 16 locations within the Kvichak River drainage and five locations within the more productively stable Naknek River drainage. Pair-wise exact tests were used to group similar collections within ecotype, within drainage, and above and below migration obstacles. After grouping, collections represented independent populations for further analyses. We examined the number of alleles per locus, mean ratio of the number of alleles to the range in allele size, heterozygosity excess, and gametic disequilibrium as measures of reduction-in-population-size events. Number of alleles per locus revealed the largest number of significant differences. Tributary populations showed a stronger signal consistent with reduced effective population size than did beach populations within the Kvichak River drainage. Kvichak River drainage populations showed a stronger signal consistent with reduced effective population size than did the Naknek River drainage populations. Populations above migration obstacles showed signals consistent with reduction in historical population sizes in multiple measures indicating some of these reductions may be severe enough to qualify as demographic bottlenecks. [ABSTRACT FROM AUTHOR]

Domesticated chinook salmon strains in British Columbia (BC), Canada are believed to have originated primarily from populations of the Big Qualicum (BQ) River and Robertson Creek (RC) on Vancouver Island in the early 1980s. The number of parental fish that gave rise to the domesticated strains and their subsequent breeding history during approximately five ensuing generations of domestication were not documented. Genetic variation at 13 microsatellite loci was examined in samples from two domesticated strains and the two progenitor populations to determine the genetic relationships among them. The domesticated strains had lower allelic diversity and tended to have lower levels of expected heterozygosity than did the BQ and RC progenitor populations. Only three alleles over all 13 loci were detected in the domesticated strains that were not present in the BQ and RC samples, whereas the progenitor strains possessed over 25 (BQ) and 43 (RC) private alleles. Genetic distance and FST values also indicated a closer relationship of the domesticated strains with the BQ than the RC population. One domesticated strain had a significant excess of heterozygosity compared with that expected under conditions of mutation-drift equilibrium, indicative of a recent genetic bottleneck. Genetic differentiation between the domesticated strains was as great as that distinguishing them from the progenitor populations, indicating that the genetic base of domesticated chinook salmon could be increased by hybridization. The existence of genetically distinct domesticated strains of chinook salmon in coastal BC generates the need for an evaluation of potential genetic interactions between domesticated escapees and natural spawning populations. [ABSTRACT FROM AUTHOR]

Identification of salmonid tissue samples to species or population of origin has been conducted for over 20 forensic cases in British Columbia. Species identification is based on published sequence variation in exon and intron regions of coding genes. Identification of source populations or regions is carried out using microsatellite and major histocompatibility complex allele frequency data collected from populations throughout the species range and with standard genetic stock identification (GSI) methods. Regional contributions to mixture samples are estimated using maximum likelihood mixture analysis and classification of individual genotypes is carried out with Bayesian methods. DNA has been obtained successfully from salmon scale samples, fresh, frozen and canned tissue samples and bloodstains in clothing. Results from DNA analyses have been instrumental in a number of convictions. A major benefit has been cost savings resulting from the number of guilty pleas entered after disclosure to the defendant of results from genetic testing. In two cases, GSI analysis resulted in exoneration of suspects under investigation for possible illegal sales of Fraser River sockeye salmon by substantiating their claim that the fish originated from the Skeena River watershed. DNA analysis has generally corroborated the species and stock identification carried out by fishery officers, but has revealed that species identification of samples from sources such as restaurants and fish plants can be erroneous. Forensic DNA analysis has facilitated the conviction of those who purchase fish not caught under the authority of licence, thus bringing those who buy fish illegally as well as those involved in illegal harvest and sales within the scope of law enforcement. [ABSTRACT FROM AUTHOR]

Steelhead, Oncorhynchus mykiss, were first introduced into the Great Lakes in the late 1800s. Subsequently, natural recruitment across the Lake Michigan basin has been regularly supplemented by primarily one hatchery strain. Recently, multiple strains derived from locations across the species native range along the west coast of the United States have also been stocked by different management agencies. Prior to 1983, hatchery supplementation of Lake Michigan steelhead populations in Michigan was largely unsuccessful due to low smolting rates of small (<120 mm) hatchery yearlings (estimated survival 0.01%). Accordingly, contributions of hatchery fish to historical adult spawning runs in Michigan tributaries were low (0–30%) across six major drainages. Large yearlings of different hatchery strains (>150 mm) have been stocked exclusively since 1983, increasing estimates of survival to smolting (90%). Consequently, the proportion of hatchery adults in spawning runs increased to 13–79%. We examined the effects of changes in stocking practices on straying rates of hatchery steelhead and to temporal changes in levels of genetic diversity and relationships among populations. We used microsatellite loci to estimate allele frequencies for six populations sampled for two time periods (1983–1984 and 1998–1999). Measures of inter-population divergence (mean FST) were not significant for either time period. However, spatial genetic relationships among historical and contemporary populations were significantly correlated with geographic distance; a result not expected if gene flow (natural straying) among populations was mediated solely by hatchery supplementation. Increased numbers of alleles in spawning adults from populations can be attributed to alleles specific to recently introduced hatchery strains. [ABSTRACT FROM AUTHOR]

Meristic trait variation among species and populations has long been used as the basis for identification and classification of fishes. Within Oncorhynchus mykiss, there is considerable variation in meristic characters such as numbers of vertebrae, lateral line scales, fin rays, gill rakers, and pyloric caeca. In our laboratory the Oregon State University (OSU) rainbow trout and the Clearwater River (CW) steelhead trout clonal lines, produced by androgenesis, exhibit significant differences in values for meristic traits, making quantitative trait locus (QTL) analysis of these meristic characters possible. Our objective was to determine the number, location, and effects of QTL associated with meristic characters in order to test two hypotheses: (1) that QTL for different meristic traits co-localize to the same linkage group and (2) that meristic trait QTL co-localize to the same linkage group as a previously identified development rate QTL. Doubled haploid individuals, produced by androgenesis from sperm from an F1 hybrid between the OSU and CW lines, were used to evaluate the joint segregation of each meristic phenotype and Amplified Fragment Length Polymorphic marker genotypes. Composite interval mapping revealed QTL for six of the seven traits analyzed. One QTL each for scales above the lateral line and for gill rakers co-localized to the same position. Only one QTL for scales above the lateral line co-localized to the same region as that for the development rate QTL, but a greater map resolution is necessary to determine if these loci are truly the same. We failed to detect pleiotropy for most meristic trait QTL. Our results suggest that different major loci are associated with variation in each meristic character and that the expression of these loci may be influenced by maternal and external environmental factors. [ABSTRACT FROM AUTHOR]

Differences in reaction distance to prey fish by piscivorous salmonids can alter predator–prey interactions under different visual conditions. We compared reaction distances of three piscivorous salmonids commonly found in western lakes: cutthroat trout, Oncorhynchus clarki utah, rainbow trout, O. mykiss, and the nonnative lake char, Salvelinus namaycush. Reaction distances to salmonid prey were measured as functions of light and turbidity in a controlled laboratory setting. In addition, predation rates and swimming speeds of lake char preying on juvenile cutthroat trout were measured experimentally under a range of light levels. Reaction distances for cutthroat trout and rainbow trout increased rapidly as light levels increased, reaching relatively constant reaction distances at higher light levels. Reaction distances for lake char were similar to cutthroat trout and rainbow trout at the lower light levels; however, lake char reaction distances continued to increase with increasing light intensity to asymptote at distances 65% higher than those for both cutthroat and rainbow trout. Predation rates by lake char were low for the darkest light levels, increased rapidly under low light levels (0.50–0.75 lx), and then declined to an intermediate rate at all higher light levels. Swimming speeds by lake char also increased rapidly from extremely low light conditions to a peak and declined to an intermediate level at light levels above 1.00 lx. These results suggest that, above the saturation intensity threshold, piscivorous lake char react to fish prey at greater distances than do cutthroat trout and rainbow trout. These differences may help explain the decline of native trout following the introductions of nonnative lake char in lakes and reservoirs of western North America. [ABSTRACT FROM AUTHOR]

As part of a comprehensive genetic evaluation of reproduction in naturally spawning coho salmon, Oncorhynchus kisutch, we examined morphometric variation in captively reared and wild adults from Hood Canal, Washington (U.S.A.) for evidence of differentiation between these groups. We collected captively reared fish as parr from two stocks and reared to adulthood at a freshwater hatchery, maturing in 1995 and 1996; we sampled closely size-matched wild fish as they returned to a neighboring stream in both years. Multivariate analysis of shape variation by Procrustes coordinates, visualized by thin-plate splines, indicated that the captively reared adults were differentiated from the wild fish by sharply reduced sexual dimorphism as well as smaller heads and less hooked snouts, increased trunk depth, larger caudal peduncles, shorter dorsal fins, larger hindbodies and a reduction in body streamlining. The differences between the captively reared and wild fish were similar to but more pronounced than some differences previously reported between hatchery and wild coho salmon. The magnitude and pattern of differences suggested that at least some of them were environmentally induced. Shape variation showed an allometric relationship with variation in body (measured as centroid) size. Morphometric variation was a poor correlate of most spawning behaviors. Nevertheless, our results suggest that the morphometric consequences of captive rearing for mate selection and reproductive activity of spawning fish may limit its effectiveness as a restorative tool. [ABSTRACT FROM AUTHOR]

The development of molecular markers has allowed behavioral ecologists to link parents to specific offspring, providing insights into breeding systems that were not apparent from direct observations of the social system. Studies of this type in fishes have focused on species with male parental care such as centrarchids, and on salmonids, a family with little parental care. In order to gain further insight into the mating system of steelhead trout, Oncorhynchus mykiss, a winter-spawning species whose reproductive system is poorly known, adults returning to spawn were captured in four consecutive years in a small, unfished, wild population. Juvenile offspring were sampled by electrofishing and parentage was determined by exclusion based on a 12 locus microsatellite genotype. Both males and females mated with multiple individuals, though single pair matings were also inferred. Females and males tended to have the same number of mates (median = 1), but males were more likely to have no apparent partner (43% vs. 23% for females) and the maximum number of mates were obtained by males (range 0–10 vs. 0–5 for females). There was no difference in median arrival date by sex, but 80% of the females mated with males that had already arrived rather than males arriving with or after the females (median = 7.5, range = 1–63 days difference). Contrary to expectations, there was no evidence of size-assortative mating; larger males and larger females did not tend to mate with each other more often than would have occurred by chance. Of the juveniles with only one identified parent, most had a known mother and an unknown father rather than the reverse (88% vs. 11%). We interpret this as indirect evidence that non-anadromous males achieved a significant number of fertilizations. Thus the steelhead mating system was complex, being more strongly structured by arrival date than fish size, and including a significant genetic contribution by mature male parr. [ABSTRACT FROM AUTHOR]