153 results on '"heterologous expression"'
Search Results
2. Cloning and functional expression in E. coli of a polyphenol oxidase transcript from Coreopsis grandiflora involved in aurone formation.
- Author
-
Kaintz, Cornelia, Molitor, Christian, Thill, Jana, Kampatsikas, Ioannis, Michael, Claudia, Halbwirth, Heidi, and Rompel, Annette
- Subjects
- *
CLONING , *ESCHERICHIA coli , *BACTERIAL proteins , *PROTEIN expression , *POLYPHENOL oxidase , *COREOPSIS , *AURONES - Abstract
Polyphenol oxidases are involved in aurone biosynthesis but the gene responsible for 4-deoxyaurone formation in Asteraceae was so far unknown. Three novel full-length cDNA sequences were isolated from Coreopsis grandiflora with sizes of 1.80 kb ( cgAUS1 ) and 1.85 kb ( cgAUS2a , 2b ), encoding for proteins of 68–69 kDa, respectively. cgAUS1 is preferably expressed in young petals indicating a specific role in pigment formation. The 58.9 kDa AUS1 holoproenzyme, was recombinantly expressed in E. coli and purified to homogeneity. The enzyme shows only diphenolase activity, catalyzing the conversion of chalcones to aurones and was characterized by SDS–PAGE and shot-gun type nanoUHPLC–ESI-MS/MS. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
3. Studying the RNA silencing pathway with the p19 protein.
- Author
-
Danielson, Dana C. and Pezacki, John Paul
- Subjects
- *
GENE silencing , *RNA physiology , *GENETIC regulation , *NUCLEOTIDES , *MOLECULAR probes , *PROTEIN engineering - Abstract
Abstract: The origins of the RNA silencing pathway are in defense against invading viruses and in response, viruses have evolved counter-measures to interfere with the host pathway. The p19 protein is expressed by tombusviruses as a suppressor of RNA silencing and functions to sequester small RNA duplexes, thereby preventing induction of the pathway. p19 exhibits size-specific and sequence-independent binding of its small RNA ligands, binding with high affinity to duplexes 20–22 nucleotides long. p19’s binding specificity and its ability to sequester small RNAs has made it a unique protein-based tool for probing the molecular mechanisms of the highly complex RNA silencing pathway in a variety of systems. Furthermore, protein engineering of this ‘molecular caliper’ promises novel applications in biotechnology and medicine where small RNA molecules are of remarkable interest given their potent gene regulatory abilities. [Copyright &y& Elsevier]
- Published
- 2013
- Full Text
- View/download PDF
4. ATP dependent charge movement in ATP7B Cu+-ATPase is demonstrated by pre-steady state electrical measurements
- Author
-
Tadini-Buoninsegni, Francesco, Bartolommei, Gianluca, Moncelli, Maria Rosa, Pilankatta, Rajendra, Lewis, David, and Inesi, Giuseppe
- Subjects
- *
HOMEOSTASIS , *ADENOSINE triphosphate , *COPPER , *ELECTRIC properties of metals , *GENE expression , *RECOMBINANT proteins , *ENZYMES - Abstract
Abstract: ATP7B is a copper dependent P-type ATPase, required for copper homeostasis. Taking advantage of high yield heterologous expression of recombinant protein, we investigated charge transfer in ATP7B. We detected charge displacement within a single catalytic cycle upon ATP addition and formation of phosphoenzyme intermediate. We attribute this charge displacement to movement of bound copper within ATP7B. Based on specific mutations, we demonstrate that enzyme activation by copper requires occupancy of a site in the N-terminus extension which is not present in other transport ATPases, as well as of a transmembrane site corresponding to the cation binding site of other ATPases. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
5. Gene expression and characterization of a stress-induced tyrosine decarboxylase from Arabidopsis thaliana
- Author
-
Lehmann, Thomas and Pollmann, Stephan
- Subjects
- *
ARABIDOPSIS thaliana , *GENE expression in plants , *DECARBOXYLASES , *ANTISENSE DNA , *RECOMBINANT proteins , *ESCHERICHIA coli , *GREEN fluorescent protein , *GENE amplification , *REVERSE transcriptase polymerase chain reaction - Abstract
Abstract: Full-length tyrosine decarboxylase cDNA (TyrDC) from Arabidopsis thaliana was identified by rapid amplification of cDNA ends-PCR and isolated by RT-PCR. The TyrDC mRNA was substantially induced by drought stress and wounding, and was considerably decreased by salt stress. By using TyrDC protein fusions with green fluorescent protein, an intracellular localization to the cytoplasm was shown. Recombinant (His)6-TyrDC was expressed in Escherichia coli and enzymatically characterized: it exclusively catalyzed the conversion of l-tyrosine to tyramine, exhibited an optimum temperature of 50°C, and an optimum pH at approximately 8.5–9. Recombinant TyrDC protein formed tetramers, as shown by blue native gel electrophoresis. Structured summary: MINT-7040408: TyrDC (uniprotkb:Q8RY79) and TyrDC (uniprotkb:Q8RY79) bind (MI:0407) by blue native page (MI:0276) [Copyright &y& Elsevier]
- Published
- 2009
- Full Text
- View/download PDF
6. Growth arrest of Synechocystis sp. PCC6803 by superoxide generated from heterologously expressed Rhodobacter sphaeroides chlorophyllide a reductase
- Author
-
Kim, Eui-Jin, Kim, Ju-Sim, Rhee, Hae Jin, and Lee, Jeong K.
- Subjects
- *
BACTERIAL growth , *GENETIC regulation , *SUPEROXIDE dismutase , *PHOTOSYNTHESIS , *CHLOROPHYLL synthesis , *BIOSYNTHESIS - Abstract
Abstract: The photosynthetic growth of Synechocystis sp. PCC6803 ceased upon expression of Rhodobacter sphaeroides chlorophyllide a reductase (COR). However, an increase in cytosolic superoxide dismutase level in the recombinant Synechocystis sp. PCC6803 completely reversed the growth cessation. This demonstrates that COR generates superoxide in Synechocystis sp. PCC6803. Considering the dissolved oxygen (DO) level suitable for COR, the intracellular DO of this oxygenic photosynthetic cell appears to be low enough to support COR-mediated superoxide generation. The growth arrest of Synechocystis sp. PCC6803 by COR may give an insight into the evolutionary path from bacteriochlorophyll a biosynthetic pathway to chlorophyll a, which bypasses COR reaction. [Copyright &y& Elsevier]
- Published
- 2009
- Full Text
- View/download PDF
7. Chansporter complexes in cell signaling
- Author
-
Geoffrey W. Abbott
- Subjects
0301 basic medicine ,Biophysics ,Biology ,Biochemistry ,Article ,Ion Channels ,Ion ,Cell membrane ,03 medical and health sciences ,Structural Biology ,Genetics ,medicine ,Animals ,Humans ,Molecular Biology ,Ion channel ,Ion transporter ,Cell Membrane ,Transporter ,Cell Biology ,030104 developmental biology ,Membrane ,medicine.anatomical_structure ,Heterologous expression ,Signal transduction ,Signal Transduction - Abstract
Ion channels facilitate diffusion of ions across cell membranes for such diverse purposes as neuronal signaling, muscular contraction, and fluid homeostasis. Solute transporters often utilize ionic gradients to move aqueous solutes up their concentration gradient, also fulfilling a wide variety of tasks. Recently, an increasing number of ion channel-transporter ('chansporter') complexes have been discovered. Chansporter complex formation may overcome what could otherwise be considerable spatial barriers to rapid signal integration and feedback between channels and transporters, the ions and other substrates they transport, and environmental factors to which they must respond. Here, current knowledge in this field is summarized, covering both heterologous expression structure/function findings and potential mechanisms by which chansporter complexes fulfill contrasting roles in cell signaling in vivo.
- Published
- 2017
- Full Text
- View/download PDF
8. Yarrowia lipolytica possesses two plasma membrane alkali metal cation/H+ antiporters with different functions in cell physiology
- Author
-
Papouskova, Klara and Sychrova, Hana
- Subjects
- *
YEAST , *CELL membranes , *ALKALI metals , *CATIONS - Abstract
Abstract: The family of Nha antiporters mediating the efflux of alkali metal cations in exchange for protons across the plasma membrane is conserved in all yeast species. Yarrowia lipolytica is a dimorphic yeast, phylogenetically very distant from the model yeast Saccharomyces cerevisiae. A search in its sequenced genome revealed two genes (designated as YlNHA1 and YlNHA2) with homology to the S. cerevisiae NHA1 gene, which encodes a plasma membrane alkali metal cation/H+ antiporter. Upon heterologous expression of both YlNHA genes in S. cerevisiae, we showed that Y. lipolytica antiporters differ not only in length and sequence, but also in their affinity for individual substrates. While the YlNha1 protein mainly increased cell tolerance to potassium, YlNha2p displayed a remarkable transport capacity for sodium. Thus, Y. lipolytica is the first example of a yeast species with two plasma membrane alkali metal cation/H+ antiporters differing in their putative functions in cell physiology; cell detoxification vs. the maintenance of stable intracellular pH, potassium content and cell volume. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
- View/download PDF
9. Deletions in the AL region of the h4xb plasma membrane Ca2+ pump: High apparent affinity for Ca2+ of a deletion mutant resembling the alternative spliced form h4zb
- Author
-
de Tezanos Pinto, Felicitas and Adamo, Hugo P.
- Subjects
- *
CELL membranes , *OVARIES , *AMINO acids , *BIOLOGICAL transport - Abstract
Abstract: Mutants of the plasma membrane Ca2+ pump (human isoform 4xb) with deletions in the linker between domain A and transmembrane segment M3 (AL region) were constructed and expressed in Chinese hamster ovary cells. The total or partial removal of the amino acid segment 300–349 did not change the maximal Ca2+ transport activity, but mutants with deletions involving residues 300–338 exhibited a higher apparent affinity for Ca2+ than the wild type h4xb enzyme. Deletion of the putative acidic lipid interacting sequence (residues 339–349) had no observable functional consequences. The removal of either residues 300–314 or 313–338 resulted in a similar increase in the apparent Ca2+ affinity of the pump although the increase was somewhat lower than that obtained by the deletion 300–349 suggesting that both deletions affected the same structural determinant. The results show that alterations in the region of the alternative splicing site A change the sensitivity to Ca2+ of the human isoform 4 of the PMCA. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
- View/download PDF
10. Mammalian NHE2 Na+/H+ exchanger mediates efflux of potassium upon heterologous expression in yeast
- Author
-
Flegelova, Hana and Sychrova, Hana
- Subjects
- *
YEAST , *CELL membranes , *HYDROGEN-ion concentration , *SACCHAROMYCES cerevisiae , *LEAVENING agents - Abstract
Abstract: Na+/H+ exchangers form a broad family of transporters that mediate opposing fluxes of alkali metal cations and protons across cell membranes. They play multiple roles in different organisms (protection from toxic cations, regulation of cell volume or pH). Rat NHE2 exchanger was expressed in a Saccharomyces cerevisiae mutant strain lacking its own exporters of alkali metal cations. Though most of the overexpressed NHE2 remained entrapped in the secretory pathway, part of it reached the plasma membrane and mediated K+ efflux from the yeast. We demonstrate for the first time that a mammalian Na+/H+ exchanger transports alkali metal cations in yeast in the opposite direction than in mammalian cells, and that the substrate specificity of the rat NHE2 exchanger is limited only to potassium cations upon expression in yeast cells. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
11. Gene expression and characterization of isoprene synthase from Populus alba
- Author
-
Sasaki, Kanako, Ohara, Kazuaki, and Yazaki, Kazufumi
- Subjects
- *
GENE expression , *ISOPRENE , *PROTEINS , *POPULUS alba - Abstract
Abstract: Isoprene synthase cDNA from Populus alba (PaIspS) was isolated by RT-PCR. This PaIspS mRNA, which was predominantly observed in the leaves, was strongly induced by heat stress and continuous light irradiation, and was substantially decreased in the dark, suggesting that isoprene emission was regulated at the transcriptional level. The subcellular localization of PaIspS protein with green fluorescent protein fusion was shown to be in plastids. PaIspS expressed in Escherichia coli was characterized enzymatically: it had an optimum pH of approximately 8.0, and an optimum temperature 40°C. Its preference for divalent cations for its activity was also studied. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
12. Human receptor Smoothened, a mediator of Hedgehog signalling, expressed in its native conformation in yeast
- Author
-
De Rivoyre, Matthieu, Bonino, Frédéric, Ruel, Laurent, Bidet, Michel, Thérond, Pascal, and Mus-Veteau, Isabelle
- Subjects
- *
ONCOLOGY , *PICHIA pastoris , *SACCHAROMYCES cerevisiae , *MICROBIAL genetics - Abstract
Abstract: Though the role of Hedgehog (Hh) signalling in patterning and differentiation during development is well established, the underlying signal transduction mechanisms remain obscure. This is the first report on the overexpression of the human Hh signalling receptor Smoothened (hSmo) in Saccharomyces cerevisiae and Pichia pastoris. We show that hSmo is expressed in both types of yeast in its native conformational state. The first purification presented here will allow the characterisation of hSmo expressed in yeast, and the scale-up of hSmo production enabling structural studies to develop new therapeutic approaches against tumors and neurodegenerative diseases induced by Hh signalling dysfunction. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
13. Molecular cloning and characterization of a glucosyltransferase catalyzing glucosylation of curcumin in cultured Catharanthus roseus cells
- Author
-
Kaminaga, Yasuhisa, Sahin, F. Pinar, and Mizukami, Hajime
- Subjects
- *
CELL suspensions , *CELL culture , *SUSPENSIONS (Chemistry) , *CLONING - Abstract
Catharanthus roseus cell suspension cultures are capable of converting exogenously supplied curcumin to various glucosides. The glucosylation efficiency is enhanced by addition of methyl jasmonate (MJ) to the cultures prior to curcumin administration. Two cDNAs encoding UDP-glucosyltransferases (CaUGT1 and CaUGT2) were isolated from a cDNA library of cultured C. roseus cells, using a PCR method directed at the conserved UDP-binding domain of plant glycosyltransferases. The sequence identity between their deduced amino acid sequences was 27%. The expression of both genes was up-regulated by addition of MJ to the cell cultures although the mRNA level of CaUGT1 was much lower than that of CaUGT2. The corresponding cDNAs were expressed in Escherichia coli as fusion proteins with maltose-binding protein. The recombinant CaUGT1 exhibited no glucosylation activity with either curcumin or curcumin monoglucoside as substrate, whereas the recombinant CaUGT2 catalyzed the formation of curcumin monoglucoside from curcumin and also conversion of curcumin monoglucoside to curcumin diglucoside. The use of the recombinant CaUGT2 may provide a useful new route for the production of curcumin glucosides. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
14. Neocarzinostatin naphthoate synthase: an unique iterative type I PKS from neocarzinostatin producer Streptomyces carzinostaticus
- Author
-
Sthapit, Basundhara, Oh, Tae-Jin, Lamichhane, Rajan, Liou, Kwangkyoung, Lee, Hei Chan, Kim, Chun-Gyu, and Sohng, Jae Kyung
- Subjects
- *
ZINOSTATIN , *STREPTOMYCES , *ANTIBIOTICS , *ANTI-infective agents - Abstract
Enediyne antibiotics are known for their potent antitumor activities. One such enediyne, neocarzinostatin (NCS), consists of a 1:1 complex of non-peptide chromophore (1a), and peptide apoprotein. The structurally diverse non-peptide chromophore is responsible for its biological activity. One of its structural components, the naphthoic acid moiety (2,7-dihydroxy-5-methyl-1-naphthoic acid, 1d) is synthesized by a polyketide synthase (PKS) pathway through condensing six intact acetate units. The 5.45 kb iterative type I PKS, neocarzinostatin naphthoate synthase (NNS), responsible for naphthoic acid moiety biosynthesis, shares sequence homology with 6-methyl salicylic acid synthase of fungi and orsellinic acid synthases (AviM and CalO5) of Streptomyces origin. Cultures of S. lividans TK24 and S. coelicolor YU105 containing plasmids with NNS were able to produce 2-hydroxy-5-methyl-1-naphthoic acid (2a), a key intermediate of naphthoic acid moiety in NCS. In addition to 2a, a novel product, 2-hydroxy-5-hydroxymethyl-1-naphthoic acid (2d) was isolated. This is the first report of a bacterial iterative type I PKS from an enediyne producer which enables the biosynthesis of bicyclic aromatic compounds. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
15. Codon harmonization - going beyond the speed limit for protein expression
- Author
-
Charlotte Mignon, Sylvie Chenavas, Priscillia Lagoutte, Adrien Lugari, Bettina Werle, Stéphanie Donnat, Natacha Mariano, Gustavo Stadthagen, Régis Sodoyer, and Cyril Perot
- Subjects
0301 basic medicine ,Codon Adaptation Index ,Biophysics ,Computational biology ,Biology ,Biochemistry ,Protein expression ,03 medical and health sciences ,0302 clinical medicine ,Structural Biology ,Genetics ,Codon ,Molecular Biology ,Gene ,Messenger RNA ,Base Sequence ,Computational Biology ,Cell Biology ,030104 developmental biology ,Gene Expression Regulation ,Solubility ,Codon usage bias ,Protein Biosynthesis ,Heterologous expression ,030217 neurology & neurosurgery ,Biogenesis ,Algorithms - Abstract
Codon usage distribution has been soundly used by nature to fine tune protein biogenesis. Alteration of the mRNA structure or sequential scheduling of codons can profoundly affect translation, thus altering protein yield, functionality, solubility, and proper folding. Building on these observations, here, we present an evaluation of different recently designed algorithms of sequence adaptation based on Codon Adaptation Index (CAI) profiling. The first algorithm globally harmonizes synonymous codons in the original sequence in full respect to the heterologous expression host codon usage. The second recodes the sequence in accordance with the native sequence CAI profile. Our data, generated on three model proteins, highlights the importance to consider gene recoding as a parameter itself for recombinant protein expression improvement.
- Published
- 2017
16. Heterologous expression ofAtPAP2in transgenic potato influences carbon metabolism and tuber development
- Author
-
Youjun Zhang, Lawrence Ramsden, Mark Aurel Schöttler, Feng Sun, Boon Leong Lim, Alisdair R. Fernie, and Joerg Fettke
- Subjects
Sucrose ,Sugar efflux ,Tuber yield ,Starch ,Acid Phosphatase ,Arabidopsis ,Biophysics ,Fructose ,Photosynthesis ,Biochemistry ,chemistry.chemical_compound ,Structural Biology ,Botany ,Genetics ,Molecular Biology ,Institut für Biochemie und Biologie ,Glycoproteins ,Plant Proteins ,Solanum tuberosum ,biology ,Arabidopsis Proteins ,AtPAP2 ,fungi ,Membrane Transport Proteins ,food and beverages ,Cell Biology ,Plants, Genetically Modified ,biology.organism_classification ,Enzyme assay ,Plant Tubers ,Horticulture ,Glucose ,chemistry ,Glucosyltransferases ,biology.protein ,Carbohydrate Metabolism ,Heterologous expression ,Phloem ,Potato - Abstract
Changes in carbon flow and sink/source activities can affect floral, architectural, and reproductive traits of plants. In potato, overexpression (OE) of the purple acid phosphatase 2 of Arabidopsis (AtPAP2) resulted in earlier flowering, faster growth rate, increased tubers and tuber starch content, and higher photosynthesis rate. There was a significant change in sucrose, glucose and fructose levels in leaves, phloem and sink biomass of the OE lines, consistent with an increased expression of sucrose transporter 1 (StSUT1). Furthermore, the expression levels and enzyme activity of sucrose-phosphate synthase (SPS) were also significantly increased in the OE lines. These findings strongly suggest that higher carbon supply from the source and improved sink strength can improve potato tuber yield. (C) 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
- Published
- 2014
- Full Text
- View/download PDF
17. Attenuation of hydrogen peroxide-mediated oxidative stress byBrassica junceaannexin-3 counteracts thiol-specific antioxidant (TSA1) deficiency inSaccharomyces cerevisiae
- Author
-
Mrinal Kanti Bhattacharyya, Naveen Kumar Singh, Abhaypratap Vishwakarma, Andrea Viehhauser, Ahan Dalal, Triveni Gudla, Pulugurtha Bharadwaja Kirti, Karl-Josef Dietz, and Kollipara Padmasree
- Subjects
Cell Membrane Permeability ,Antioxidant ,GPX2 ,Cell Survival ,medicine.medical_treatment ,Cross talk ,SOD1 ,Biophysics ,SOD2 ,Saccharomyces cerevisiae ,Oxidative phosphorylation ,Biology ,medicine.disease_cause ,Biochemistry ,Gene Knockout Techniques ,Structural Biology ,Genetics ,medicine ,Sulfhydryl Compounds ,Annexin A3 ,Molecular Biology ,chemistry.chemical_classification ,Reactive oxygen species ,Complementation ,Hydrogen Peroxide ,Peroxiredoxins ,Cell Biology ,Brassica juncea annexin-3 ,chemistry ,Oxidative stress ,Thioredoxin peroxidase 1 ,Heterologous expression ,Mustard Plant - Abstract
Brassica juncea annexin-3 (BjAnn3) was functionally characterized for its ability to modulate H(2)O(2-)mediated oxidative stress in Saccharomyces cerevisiae. BjAnn3 showed a significant protective role in cellular-defense against oxidative stress and partially alleviated inhibition of mitochondrial respiration in presence of exogenously applied H2O2. Heterologous expression of BjAnn3 protected membranes from oxidative stress-mediated damage and positively regulated antioxidant gene expression for ROS detoxification. We conclude that, BjAnn3 partially counteracts the effects of thioredoxin peroxidase 1 (TSA1) deficiency and aids in cellular-protection across kingdoms. Despite partial compensation of TSA1 by BjAnn3 in cell-viability tests, the over-complementation in ROS-related features suggests the existence of both redundant (e. g. ROS detoxification) and distinct features (e. g. membrane protection versus proximity-based redox regulator) of both proteins. (C) 2014 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
- Published
- 2014
- Full Text
- View/download PDF
18. The amino acid transporter, SLC1A3, is plasma membrane-localised in adipocytes and its activity is insensitive to insulin
- Author
-
Renae M. Ryan, James R. Krycer, Daniel J. Fazakerley, James G. Burchfield, Robert J. Vandenberg, Rosemary J. Cater, Sean J. Humphrey, Kristen C. Thomas, David E. James, and Sheyda Naghiloo
- Subjects
0301 basic medicine ,medicine.medical_treatment ,Biophysics ,Xenopus ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,Xenopus laevis ,Structural Biology ,Adipocyte ,3T3-L1 Cells ,Genetics ,medicine ,Adipocytes ,Animals ,Humans ,Insulin ,Protein phosphorylation ,Amino acid transporter ,Amino Acid Sequence ,Phosphorylation ,Molecular Biology ,biology ,Catabolism ,Cell Membrane ,Cell Biology ,biology.organism_classification ,Excitatory Amino Acid Transporter 1 ,030104 developmental biology ,HEK293 Cells ,chemistry ,Oocytes ,Heterologous expression - Abstract
The hormone insulin coordinates the catabolism of nutrients by protein phosphorylation. Phosphoproteomic analysis identified insulin-responsive phosphorylation of the Glu/Asp transporter SLC1A3/EAAT1 in adipocytes. The role of SLC1A3 in adipocytes is not well-understood. We show that SLC1A3 is localised to the plasma membrane and the major regulator of acidic amino acid uptake in adipocytes. However, its localisation and activity were unaffected by insulin or mutation of the insulin-regulated phosphosite. The latter was also observed using a heterologous expression system in Xenopus laevis oocytes. Thus, SLC1A3 maintains a constant import of acidic amino acids independent of nutritional status in adipocytes. This article is protected by copyright. All rights reserved.
- Published
- 2016
19. Functional identification of AtAVT3, a family of vacuolar amino acid transporters, in Arabidopsis
- Author
-
Yoshinori Ohsumi, Takayuki Sekito, Miyuki Kawano-Kawada, Yuki Fujiki, Hiromitsu Teshima, Yoshimi Kakinuma, and Shinji Kashiwao
- Subjects
0301 basic medicine ,Amino Acid Transport Systems ,Biophysics ,Arabidopsis ,Vacuole ,Saccharomyces cerevisiae ,Biochemistry ,Green fluorescent protein ,03 medical and health sciences ,Structural Biology ,Gene Expression Regulation, Plant ,Plant Cells ,Genetics ,Protein biosynthesis ,Amino acid transporter ,Amino Acid Sequence ,Amino Acids ,Molecular Biology ,Phylogeny ,chemistry.chemical_classification ,biology ,Sequence Homology, Amino Acid ,Chemistry ,Arabidopsis Proteins ,Biological Transport ,Cell Biology ,Intracellular Membranes ,biology.organism_classification ,Yeast ,Amino acid ,030104 developmental biology ,Vacuoles ,Heterologous expression ,Subcellular Fractions - Abstract
Amino acids stored in the vacuoles are exported to the cytosol mainly for protein synthesis; however, the molecular identity of vacuolar amino acid exporters remains obscure in plants. Here, we demonstrate that the heterologous expression of AtAVT3 genes, Arabidopsis homologs of AVT3 and AVT4 encoding vacuolar amino acid exporters in yeast, reduces vacuolar amino acid levels in the avt3∆avt4∆ yeast cells. In vitro experiments revealed that 14C-labeled Ala and Pro are exported from vacuolar membrane vesicles by AtAvt3A in an ATP-dependent manner. In Arabidopsis, AtAvt3A fused with green fluorescent protein localizes to the vacuolar membrane. We propose that AtAVT3 family represents the long sought-for vacuolar amino acid exporters in plants.
- Published
- 2016
20. Functional analysis of metal tolerance proteins isolated from Zn/Cd hyperaccumulating ecotype and non-hyperaccumulating ecotype of Sedum alfredii Hance
- Author
-
Takeshi Senoura, Xiaoe Yang, Naoko K. Nishizawa, and Min Zhang
- Subjects
Molecular Sequence Data ,Mutant ,Intracellular Space ,Biophysics ,Saccharomyces cerevisiae ,medicine.disease_cause ,Biochemistry ,Sedum ,Gene Expression Regulation, Plant ,Structural Biology ,Botany ,Genetics ,medicine ,Hyperaccumulator ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Plant Proteins ,Ecotype ,biology ,Chemistry ,fungi ,food and beverages ,Sequence Analysis, DNA ,Cell Biology ,biology.organism_classification ,Sedum alfredii Hance ,Protein Transport ,Zinc ,Sedum alfredii ,Mutation ,Shoot ,Zinc toxicity ,Heterologous expression ,Metal tolerance protein (MTP1) ,Cadmium - Abstract
The Zn/Cd hyperaccumulating ecotype (HE) of Sedum alfredii Hance can accumulate 24- and 28-fold higher leaf and stem Zn concentrations when compared with the non-hyperaccumulating ecotype (NHE) of Sedum. Heterologous expression of a metal tolerance protein (MTP1) encoding gene from HE plants (SaMTP1) or the homologous gene from NHE plants (SnMTP1) suppressed Zn2+ hypersensitivity in the Δzrc1 yeast mutant. In plants, SaMTP1 localized to the tonoplast. Furthermore, MTP1 transcript level in the shoot of HE plants was more than 80-fold higher than that of NHE plants. The transcript level of SaMTP1 in shoot was up-regulated 1-fold by Zn2+ while the expression of SnMTP1 was slightly inhibited. These data suggest that SaMTP1 can play an important role in Zn accumulation in HE plants.
- Published
- 2011
- Full Text
- View/download PDF
21. Gene expression and characterization of a stress-induced tyrosine decarboxylase fromArabidopsis thaliana
- Author
-
Thomas Lehmann and Stephan Pollmann
- Subjects
Cytoplasm ,DNA, Plant ,Recombinant Fusion Proteins ,Substrate specificity ,Arabidopsis ,Biophysics ,Genes, Plant ,Biochemistry ,Green fluorescent protein ,Rapid amplification of cDNA ends ,Stress, Physiological ,Structural Biology ,Complementary DNA ,Gene expression ,Escherichia coli ,Genetics ,Arabidopsis thaliana ,Tyrosine ,Protein Structure, Quaternary ,Molecular Biology ,Phylogeny ,Microscopy, Confocal ,Base Sequence ,biology ,Arabidopsis Proteins ,Temperature ,Cell Biology ,Hydrogen-Ion Concentration ,Tyrosine decarboxylase ,biology.organism_classification ,Molecular biology ,Kinetics ,Intracellular localization ,Heterologous expression ,Aromatic l-amino acid decarboxylase - Abstract
Full-length tyrosine decarboxylase cDNA ( TyrDC ) from Arabidopsis thaliana was identified by rapid amplification of cDNA ends-PCR and isolated by RT-PCR. The TyrDC mRNA was substantially induced by drought stress and wounding, and was considerably decreased by salt stress. By using TyrDC protein fusions with green fluorescent protein, an intracellular localization to the cytoplasm was shown. Recombinant (His) 6 -TyrDC was expressed in Escherichia coli and enzymatically characterized: it exclusively catalyzed the conversion of l -tyrosine to tyramine, exhibited an optimum temperature of 50 °C, and an optimum pH at approximately 8.5–9. Recombinant TyrDC protein formed tetramers, as shown by blue native gel electrophoresis. Structured summary MINT- 7040408 : TyrDC (uniprotkb: Q8RY79 ) and TyrDC (uniprotkb: Q8RY79 ) bind (MI: 0407 ) by blue native page (MI: 0276 )
- Published
- 2009
- Full Text
- View/download PDF
22. Deletions in the ALregion of the h4xb plasma membrane Ca2+pump
- Author
-
Felicitas de Tezanos Pinto and Hugo P. Adamo
- Subjects
Gene isoform ,Molecular Sequence Data ,Mutant ,Biophysics ,CHO Cells ,Calcium-Transporting ATPases ,Biology ,Biochemistry ,Plasma Membrane Calcium-Transporting ATPases ,Cricetulus ,Structural Biology ,Cricetinae ,Genetics ,Animals ,Humans ,Amino Acid Sequence ,Plasma membrane Ca2+ pump (PMCA) ,Cation Transport Proteins ,Molecular Biology ,Alternative splicing site A ,Sequence Deletion ,chemistry.chemical_classification ,Chinese hamster ovary cell ,Alternative splicing ,Wild type ,Directed mutagenesis ,Cell Biology ,Molecular biology ,Protein Structure, Tertiary ,Amino acid ,Isoenzymes ,Alternative Splicing ,Transmembrane domain ,chemistry ,Mutation ,Ca2+ apparent affinity ,Calcium ,RNA Splice Sites ,Heterologous expression - Abstract
Mutants of the plasma membrane Ca(2+) pump (human isoform 4xb) with deletions in the linker between domain A and transmembrane segment M3 (A(L) region) were constructed and expressed in Chinese hamster ovary cells. The total or partial removal of the amino acid segment 300-349 did not change the maximal Ca(2+) transport activity, but mutants with deletions involving residues 300-338 exhibited a higher apparent affinity for Ca(2+) than the wild type h4xb enzyme. Deletion of the putative acidic lipid interacting sequence (residues 339-349) had no observable functional consequences. The removal of either residues 300-314 or 313-338 resulted in a similar increase in the apparent Ca(2+) affinity of the pump although the increase was somewhat lower than that obtained by the deletion 300-349 suggesting that both deletions affected the same structural determinant. The results show that alterations in the region of the alternative splicing site A change the sensitivity to Ca(2+) of the human isoform 4 of the PMCA.
- Published
- 2006
- Full Text
- View/download PDF
23. The multidrug resistance-associated protein (MRP/ABCC) subfamily of ATP-binding cassette transporters in plants
- Author
-
Bo Burla, Markus Klein, and Enrico Martinoia
- Subjects
Subfamily ,Mutant ,Biophysics ,Gene Expression ,Transport ,Guard cell regulation ,ATP-binding cassette transporter ,Genes, Plant ,Biochemistry ,Species Specificity ,Structural Biology ,Arabidopsis ,Genetics ,Molecular Biology ,Gene ,biology ,fungi ,Cell Biology ,Plants ,biology.organism_classification ,Cell biology ,Vacuolar transport ,Multigene Family ,Vacuole ,Heterologous expression ,Multidrug Resistance-Associated Proteins ,Detoxification ,Tonoplast ,Plasma membrane - Abstract
In many different plant species, genes belonging to the multidrug resistance-associated protein (MRP, ABCC) subfamily of ABC transporters have been identified. Following the discovery of vacuolar transport systems for xenobiotic or plant-produced conjugated organic anions, plant MRPs were originally proposed to be primarily involved in the vacuolar sequestration of potentially toxic metabolites. Indeed, heterologous expression of different Arabidopsis MRPs in yeast demonstrates their activity as ATP-driven pumps for structurally diverse substrates. Recent analysis of protein–protein interactions and the characterization of knockout mutants in Arabidopsis suggests that apart from transport functions plant MRPs play additional roles including the control of plant transpiration through the stomata. Here, we review and discuss the diverse functions of plant MRP-type ABC transporters and present an organ-related and developmental analysis of the expression of Arabidopsis MRPs using the publicly available full-genome chip data.
- Published
- 2005
- Full Text
- View/download PDF
24. A fourth ADP/ATP carrier isoform in man: identification, bacterial expression, functional characterization and tissue distribution
- Author
-
Pasquale Scarcia, Ferdinando Palmieri, Vincenza Dolce, and Domenico Iacopetta
- Subjects
Gene isoform ,Mitochondrial carrier ,Isoform ,Subfamily ,Antiporter ,Molecular Sequence Data ,Biophysics ,Transport ,Mitochondrion ,Biology ,Polymerase Chain Reaction ,Biochemistry ,Structural Biology ,Genetics ,Humans ,Protein Isoforms ,Amino Acid Sequence ,Molecular Biology ,Sequence Homology, Amino Acid ,Cell Biology ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,Transport protein ,Liver ,Liposomes ,ADP/ATP carrier ,bacteria ,ATP–ADP translocase ,Heterologous expression ,Mitochondrial ADP, ATP Translocases ,Plasmids - Abstract
The mitochondrial ADP/ATP carriers (AACs) catalyze the exchange of cytosolic ADP for matrix ATP. We have identified and characterized a novel member of the AAC subfamily of mitochondrial metabolite transport proteins, termed AAC4. The AAC4 gene maps to human chromosome 4q28.1, and its product AAC4 is 66–68% identical to human AAC 1–3 and is localized to mitochondria. AAC4 transcripts are exclusively present in liver, testis and brain unlike those of AAC 1–3. Consistent with its belonging to the AAC subfamily, upon heterologous expression and reconstitution into liposomes AAC4 exchanges ADP for ATP by an electrogenic antiport mechanism with high specificity and high sensitivity to carboxyatractyloside and bongkrekic acid.
- Published
- 2004
- Full Text
- View/download PDF
25. Glycosylation of asparagines 136 and 184 is necessary for the α2δ subunit-mediated regulation of voltage-gated Ca2+channels
- Author
-
Ricardo Felix, Alejandro Sandoval, Norma Oviedo, and Arturo Andrade
- Subjects
Glycosylation ,Patch-Clamp Techniques ,Protein subunit ,Amino Acid Motifs ,Biophysics ,Stimulation ,N-glycosylation ,Biology ,Biochemistry ,Cell Line ,HEK-293 cell ,chemistry.chemical_compound ,N-linked glycosylation ,Genes, Reporter ,Structural Biology ,Consensus Sequence ,CaV2.2 channel ,Genetics ,Humans ,Point Mutation ,Amino Acid Sequence ,Molecular Biology ,chemistry.chemical_classification ,Ca2+ channel ,Voltage-gated ion channel ,Mutagenesis ,α2δ subunit ,Cell Biology ,Peptide Fragments ,Recombinant Proteins ,Protein Structure, Tertiary ,Up-Regulation ,Amino acid ,Cell biology ,Amino Acid Substitution ,chemistry ,Barium ,Calcium Channels ,Heterologous expression ,Asparagine ,Ion Channel Gating - Abstract
The CaValpha2delta auxiliary subunit is a glycosylated protein that regulates the trafficking and function of voltage-gated Ca2+ channels. One of the most prominent roles of CaValpha2delta is to increase whole-cell Ca2+ current amplitude. Using N-glycosidase F and truncated forms of CaValpha2delta, earlier studies suggested an important role for N-linked glycosylation in current stimulation. Here, we used site-directed mutagenesis and heterologous expression in HEK-293 cells to examine the impact of individual glycosylation sites within the CaValpha2delta subunit on the regulation of Ba2+ currents through recombinant Ca2+ channels. We found two N-glycosylation consensus sites (NX(S/T)) in the extracellular alpha2 domain of the protein that are functional. Substitution of asparagines for glutamines at amino acid positions 136 and 184 rendered these sites non-functional as shown by patch-clamp experiments. These results corroborate that N-glycosylation is required for the CaValpha2delta subunit-induced current stimulation and suggest that sites N136 and N184 are directly involved in this action. Likewise, N136Q and N184Q mutations prevented whole-cell current stimulation without altering its kinetic properties, suggesting a regulation on the number of functional channels at the plasma membrane.
- Published
- 2004
- Full Text
- View/download PDF
26. Orientation-dependent gene expression with Epstein-Barr virus-derived vectors
- Author
-
Kathleen Van Craenenbroeck, Peter Vanhoenacker, Inge Roman, and Guy Haegeman
- Subjects
Chloramphenicol O-Acetyltransferase ,Herpesvirus 4, Human ,Transcription, Genetic ,Genetic Vectors ,Biophysics ,Heterologous ,Replication Origin ,Biology ,Transfection ,Virus Replication ,Biochemistry ,Cell Line ,Epstein–Barr virus ,Chloramphenicol acetyltransferase ,Genes, Reporter ,Structural Biology ,Inducible expression ,Chlorocebus aethiops ,Gene expression ,Genetics ,Animals ,Humans ,Mx promoter ,Vero Cells ,Molecular Biology ,Gene ,Episomal vector ,Reporter gene ,Expression vector ,Interferon-alpha ,Cell Biology ,Blotting, Northern ,Molecular biology ,Transcriptional interference ,Blotting, Southern ,Epstein-Barr Virus Nuclear Antigens ,Gene Expression Regulation ,Receptor, Serotonin, 5-HT1B ,Expression cassette ,Heterologous expression - Abstract
Episomal vectors, described for efficient and regulated expression of heterologous proteins in mammalian cells, have the advantage that they persist in multiple copies in the cell without integrating into the chromosome. To efficiently express heterologous proteins we used such a vector based on elements of the Epstein–Barr virus (EBV), namely the sequences coding for Epstein–Barr nuclear antigen 1 and the viral origin of replication. Because constitutive expression is often deleterious to the cell, we combined the interferon-inducible Mx promoter with this EBV-derived vector. This resulted in an efficient and strictly regulated expression of the reporter gene chloramphenicol acetyltransferase (CAT) and of the neurotransmitter receptor h5-HT1B, reaching levels of 16 ng CAT/mg cytoplasmic protein and 1300 fmol receptor/mg membrane protein, respectively. For both proteins, the expression levels were influenced by the orientation of the expression cassette. The higher expression in the favored orientation did not result from a higher copy number of these episomes. Northern analysis revealed a transcriptional read-through from the thymidine kinase promoter on the episomal vector, which interfered with the transcription of the heterologous gene in the less favored orientation.
- Published
- 2003
- Full Text
- View/download PDF
27. Identification of a very long chain polyunsaturated fatty acid Δ4-desaturase from the microalga Pavlova lutheri 1
- Author
-
Tony R. Larson, Thierry Tonon, David Harvey, and Ian A. Graham
- Subjects
chemistry.chemical_classification ,Expressed sequence tag ,Biophysics ,Very long chain ,Cell Biology ,Biochemistry ,Yeast ,chemistry ,Structural Biology ,Docosahexaenoic acid ,Complementary DNA ,Genetics ,Heterologous expression ,Molecular Biology ,Peptide sequence ,Polyunsaturated fatty acid - Abstract
Pavlova lutheri, a marine microalga, is rich in the very long chain polyunsaturated fatty acids (VLCPUFAs) eicosapentaenoic (20:5n-3) and docosahexaenoic (22:6n-3) acids. Using an expressed sequence tag approach, we isolated a cDNA designated Pldes1, and encoding an amino acid sequence showing high similarity with polyunsaturated fatty acid front-end desaturases. Heterologous expression in yeast demonstrated that PlDES1 desaturated 22:5n-3 and 22:4n-6 into 22:6n-3 and 22:5n-6 respectively, and was equally active on both substrates. Thus, PlDES1 is a novel VLCPUFA Δ4-desaturase. Pldes1 expression is four-fold higher during the mid-exponential phase of growth compared to late exponential and stationary phases.
- Published
- 2003
- Full Text
- View/download PDF
28. A system for the heterologous expression of complex redox proteins inRhodobacter capsulatus: characterisation of recombinant sulphite:cytochromecoxidoreductase fromStarkeya novella
- Author
-
Alastair G. McEwan and Ulrike Kappler
- Subjects
Sulfite Dehydrogenase ,Molecular Sequence Data ,Biophysics ,medicine.disease_cause ,Biochemistry ,Rhodobacter capsulatus ,Cofactor ,Starkeya novella ,Structural Biology ,Oxidoreductase ,Genetics ,medicine ,Promoter Regions, Genetic ,Redox protein ,Molecular Biology ,Escherichia coli ,Cytochrome Reductases ,DNA Primers ,chemistry.chemical_classification ,Rhodobacter ,Expression vector ,Base Sequence ,biology ,Circular Dichroism ,Cytochrome c ,Molybdoenzyme ,Cell Biology ,Thiobacillus ,biology.organism_classification ,Recombinant Proteins ,chemistry ,Haem c ,biology.protein ,Protein expression ,Spectrophotometry, Ultraviolet ,Heterologous expression ,Oxidation-Reduction - Abstract
The phototrophic purple non-sulfur bacterium Rhodobacter capsulatus expresses a wide variety of complex redox proteins in response to changing environmental conditions. Here we report the construction and evaluation of an expression system for recombinant proteins in that organism which makes use of the dor promoter from the same organism. A generic expression vector, pDorEX, was constructed and used to express sulphite:cytochrome c oxidoreductase from Starkeya novella, a heterodimeric protein containing both molybdenum and haem c. The recombinant protein was secreted to the periplasm and its biochemical properties were very similar to those of the native enzyme. The pDorEX system therefore seems to be potentially useful for heterologous expression of multi-subunit proteins containing complex redox cofactors.
- Published
- 2002
- Full Text
- View/download PDF
29. A polygalacturonase of animal origin isolated from the root-knot nematodeMeloidogyne incognita1
- Author
-
Stéphanie Jaubert, Pierre Abad, Marie-Noëlle Rosso, and Jean-Baptiste Laffaire
- Subjects
Signal peptide ,biology ,Biophysics ,Cell Biology ,biology.organism_classification ,Biochemistry ,Microbiology ,Nematode ,Structural Biology ,Complementary DNA ,Genetics ,Tylenchoidea ,Meloidogyne incognita ,Root-knot nematode ,Heterologous expression ,Pectinase ,Molecular Biology - Abstract
The first animal polygalacturonase (PG, EC 2.1.15) encoding cDNA, Mi-pg-1, was cloned from the plant parasitic nematode Meloidogyne incognita. The enzymatic activity of MI-PG-1 was confirmed after heterologous expression in Escherichia coli. The presence of a predicted signal peptide on the MI-PG-1 sequence together with the specific localization of the transcripts of the Mi-pg-1 gene in the oesophageal glands of infective juveniles imply that MI-PG-1 could be secreted into plant tissues. The potential role of MI-PG-1 in parasitism is discussed.
- Published
- 2002
- Full Text
- View/download PDF
30. Cloning and functional expression in E. coli of a polyphenol oxidase transcript from Coreopsis grandiflora involved in aurone formation
- Author
-
Cornelia, Kaintz, Christian, Molitor, Jana, Thill, Ioannis, Kampatsikas, Claudia, Michael, Heidi, Halbwirth, and Annette, Rompel
- Subjects
LC/MS, liquid chromatography/mass spectrometry ,Polyphenol oxidase ,Molecular Sequence Data ,Gene Expression ,PHC, 2′,3,4,4′,6′-pentahydroxychalcone ,Flowers ,Article ,IPTG, isopropyl-β-d-thiogalactopyranosid ,nanoUHPLC–ESI-MS/MS, ultra high performance liquid chromatography–electrospray tandem mass spectrometry ,4-Deoxyaurone ,Aurone synthase ,Escherichia coli ,cgAUS, aurone synthase from Coreopsis grandiflora (gene) ,Amino Acid Sequence ,Cloning, Molecular ,Phylogeny ,Benzofurans ,Plant Proteins ,EFα, elongation factor α ,RuBisCO, ribulose-1,5-bisphosphate carboxylase/oxygenase ,Coreopsis grandiflora ,Pigmentation ,LC, liquid chromatography ,THC, 2′,4,4′,6′-tetrahydroxychalcone ,AmAS1, aureusidin synthase from Antirrhinum majus ,Sequence Analysis, DNA ,SB, super broth media ,PPO, polyphenol oxidase ,Organ Specificity ,DTT, dithiothreitol ,Type-3 copper ,Coreopsis ,Heterologous expression ,Catechol Oxidase ,AUS, aurone synthase (protein) - Abstract
Highlights • The first PPO gene (cgAUS1) involved in 4-deoxyaurone formation is identified. • AUS1 is expressed as latent pro-enzyme in E. coli and purified to homogeneity. • Diphenolase activity of AUS1 pro-enzyme is proven using SDS as an activation agent. • Gene expression studies suggest a physiological role for AUS1 in aurone formation., Polyphenol oxidases are involved in aurone biosynthesis but the gene responsible for 4-deoxyaurone formation in Asteraceae was so far unknown. Three novel full-length cDNA sequences were isolated from Coreopsis grandiflora with sizes of 1.80 kb (cgAUS1) and 1.85 kb (cgAUS2a, 2b), encoding for proteins of 68–69 kDa, respectively. cgAUS1 is preferably expressed in young petals indicating a specific role in pigment formation. The 58.9 kDa AUS1 holoproenzyme, was recombinantly expressed in E. coli and purified to homogeneity. The enzyme shows only diphenolase activity, catalyzing the conversion of chalcones to aurones and was characterized by SDS–PAGE and shot-gun type nanoUHPLC–ESI-MS/MS.
- Published
- 2014
31. Functional identification of sterol-4α-methyl oxidase cDNAs fromArabidopsis thalianaby complementation of a yeasterg25mutant lacking sterol-4α-methyl oxidation1
- Author
-
Alain Rahier, Martin Bard, and Sylvain Darnet
- Subjects
Ergosterol ,cDNA library ,Saccharomyces cerevisiae ,Biophysics ,Cell Biology ,Biology ,biology.organism_classification ,Biochemistry ,Molecular biology ,Complementation ,chemistry.chemical_compound ,chemistry ,Structural Biology ,Arabidopsis ,Complementary DNA ,Genetics ,Arabidopsis thaliana ,Heterologous expression ,Molecular Biology - Abstract
Specific primers derived from both genomic sequence data and EST cDNA sequences were used to polymerase chain reaction amplify two full-length cDNA sequences (AtSMO1 and AtSMO2), 801 and 783 bp, respectively, from an Arabidopsis thaliana cDNA library. The predicted proteins show 32 and 29% identity to the ERG25 gene from Saccharomyces cerevisiae which encodes the sterol-4alpha-methyl oxidase (SMO), a membrane-bound non-heme di-iron oxygenase involved in lipid metabolism. Heterologous expression of AtSMO1 and AtSMO2 in a yeast erg25 ergosterol auxotroph, lacking SMO activity, restored growth and endogenous ergosterol synthesis. These results represent the first functional identification of SMO genes from plants.
- Published
- 2001
- Full Text
- View/download PDF
32. Functional identification of the glycerol permease activity of Arabidopsis thaliana NLM1 and NLM2 proteins by heterologous expression in Saccharomyces cerevisiae
- Author
-
Christiane Jakob and Alfons Weig
- Subjects
Glycerol ,Osmosis ,Saccharomyces cerevisiae Proteins ,Molecular Sequence Data ,Arabidopsis ,Biophysics ,Glycerol transport ,Aquaporin ,Saccharomyces cerevisiae ,Aquaporins ,Biochemistry ,Ion Channels ,Fungal Proteins ,Sugar Alcohols ,Transformation, Genetic ,Osmotic Pressure ,Structural Biology ,Genetics ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Hexoses ,Plant Proteins ,Water transport ,Sequence Homology, Amino Acid ,biology ,Arabidopsis Proteins ,Permease ,Membrane transport protein ,Genetic Complementation Test ,Major intrinsic proteins ,Membrane Proteins ,Membrane Transport Proteins ,Biological Transport ,Aquaglyceroporin ,Cell Biology ,Water-Electrolyte Balance ,Phenotype ,Membrane protein ,biology.protein ,Major intrinsic protein ,Heterologous expression - Abstract
NLM proteins (NOD26-like major intrinsic proteins) from plants contain amino acid sequence signatures which can be found in aquaporins including plant plasma membrane intrinsic proteins and tonoplast intrinsic proteins and glycerol permeases such as the Escherichia coli GlpF and the yeast FPS1 proteins. Heterologous expression of two members of the NLM subgroup from Arabidopsis thaliana (AtNLM1 and AtNLM2) in baker’s yeast demonstrated the glycerol permease activity in addition to the previously described aquaporin activity of AtNLM1. The transport was non-saturable up to 100 mM extracellular glycerol concentration. Longer-chain sugar alcohols did not compete with the transport of radiolabelled glycerol and hexoses were also not transported through the pore.
- Published
- 2000
- Full Text
- View/download PDF
33. Characterization of S818L mutation in HERG C-terminus in LQT2
- Author
-
Tetsushi Furukawa, Yoshio Ohyama, Yusuke Nakamura, Yoshiaki Kaneko, Tadashi Nakajima, Toshihiro Tanaka, Toshio Itoh, Masahiko Kurabayashi, Ryozo Nagai, Yasuhiro Taniguchi, and Masayasu Hiraoka
- Subjects
ERG1 Potassium Channel ,Potassium Channels ,Xenopus ,medicine.disease_cause ,Biochemistry ,Membrane Potentials ,RNA, Complementary ,C-terminus ,Xenopus laevis ,Structural Biology ,Potassium channel ,Genes, Suppressor ,Cation Transport Proteins ,Genes, Dominant ,Membrane potential ,Mutation ,biology ,DNA-Binding Proteins ,Long QT Syndrome ,Phenotype ,Potassium Channels, Voltage-Gated ,Ether-A-Go-Go Potassium Channels ,Ion Channel Gating ,Protein Binding ,congenital, hereditary, and neonatal diseases and abnormalities ,Microinjections ,hERG ,Biophysics ,Structure-Activity Relationship ,Transcriptional Regulator ERG ,Genetics ,medicine ,Animals ,Humans ,cardiovascular diseases ,Protein Structure, Quaternary ,Molecular Biology ,Voltage-gated ion channel ,urogenital system ,Electric Conductivity ,Cell Biology ,biology.organism_classification ,Molecular biology ,Amino Acid Substitution ,Oocytes ,Potassium ,Trans-Activators ,biology.protein ,Heterologous expression - Abstract
We examined the mechanism(s) for HERG channel dysfunction in an S818L mutation in the HERG C-terminus using the heterologous expression system in Xenopus oocytes. Injection of S818L cRNA alone did not produce expressed currents. Coinjection of an equal amount of S818L cRNA with wild-type (WT) cRNA into oocytes did not exhibit apparent dominant-negative suppression. However, coinjection of excess amounts of S818L cRNAs with WT cRNA into oocytes decreased HERG current amplitudes and shifted the voltage dependence of activation to negative potentials, accelerated its activation and deactivation. The data suggest that S818L alone cannot form functional channels, whereas S818L subunits can, at least in part, coassemble with WT subunits to form heterotetrameric functional channels, and imply that the HERG C-terminus may contain a domain involving the activation–deactivation process of the channel. These findings may provide new insights into the structure–function relationships of the HERG C-terminus.
- Published
- 2000
- Full Text
- View/download PDF
34. Cloning and characterization of a root specific high-affinity sulfate transporter fromArabidopsis thaliana
- Author
-
Bruno Touraine, Jean-Claude Davidian, Joseph John Vidmar, Abderrahmane Tagmount, and Nicole Cathala
- Subjects
DNA, Complementary ,Molecular Sequence Data ,Mutant ,Arabidopsis ,Biophysics ,Plant Roots ,Biochemistry ,chemistry.chemical_compound ,Structural Biology ,Complementary DNA ,Gene expression ,Genetics ,Arabidopsis thaliana ,Buthionine sulfoximine ,Cloning, Molecular ,Molecular Biology ,biology ,Sulfates ,Membrane Transport Proteins ,Biological Transport ,Cell Biology ,Glutathione ,biology.organism_classification ,Molecular biology ,Sulfate transport ,chemistry ,Sulfate Transporters ,Heterologous expression ,Carrier Proteins - Abstract
Hst1At (accession number AB018695) was identified from the Arabidopsis thaliana sequencing project on BAC T3F12, and the corresponding cDNA was isolated by reverse transcription-PCR. Southern blot analysis reveals a single copy of this gene. The cDNA encodes a root specific sulfate transporter of 649 amino acids. Heterologous expression of hst1At in a sulfate transport deficient yeast mutant shows that this gene encodes a high-affinity transport system ( approximately 2 microM). The transcript relative abundance increases in roots in response to sulfate deprivation, which correlated with increased root SO(4)(2-) influx capacity. These patterns were reversed upon sulfate addition to the medium and were accompanied by an increased glutathione level in roots. Feeding plants with cysteine or glutathione led to similar responses. Using buthionine sulfoximine, an inhibitor of glutathione synthesis, we show that glutathione rather than cysteine controls hst1At expression.
- Published
- 2000
- Full Text
- View/download PDF
35. Cloning and heterologous expression of a cDNA encoding 1-deoxy-<scp>D</scp> -xylulose-5-phosphate reductoisomerase of Arabidopsis thaliana 1
- Author
-
Jörg Schwender, Hartmut K. Lichtenthaler, Christian Müller, and Johannes Zeidler
- Subjects
chemistry.chemical_classification ,Cloning ,biology ,Biophysics ,Cell Biology ,biology.organism_classification ,medicine.disease_cause ,Biochemistry ,Fosmidomycin ,Enzyme ,chemistry ,Structural Biology ,Complementary DNA ,Arabidopsis ,Genetics ,medicine ,Arabidopsis thaliana ,Heterologous expression ,Molecular Biology ,Escherichia coli ,medicine.drug - Abstract
Various plant isoprenoids are synthesized via the non-mevalonate pathway of isopentenyl diphosphate formation. In this pathway, 1-deoxy-D-xylulose 5-phosphate (DOXP), the first intermediate, is transformed to 2-C-methyl-D-erythritol 4-phosphate (MEP) by an enzyme which was recently cloned from Escherichia coli. In order to find a plant homologue of this 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) we cloned a cDNA fragment from Arabidopsis thaliana which has high homology to the E. coli DXR. By expression of this fragment in E. coli we could demonstrate that it encodes a protein which transforms DOXP to MEP. The antibiotic fosmidomycin specifically inhibits this DXR enzyme activity.
- Published
- 1999
- Full Text
- View/download PDF
36. Regulation of Ca-sensitive inactivation of a l-type Ca2+channel by specific domains of β subunits
- Author
-
Sophie Restituito, Pierre Charnet, and Thierry Cens
- Subjects
HEPES ,biology ,Chemistry ,Voltage clamp ,Specificity factor ,Protein subunit ,Biophysics ,Xenopus ,β2/β1 chimera ,Cell Biology ,Inhibitory postsynaptic potential ,biology.organism_classification ,Biochemistry ,Molecular biology ,Cell biology ,chemistry.chemical_compound ,Structural Biology ,Genetics ,splice ,Heterologous expression ,Xenopus oocyte ,Molecular Biology - Abstract
Ca2+ channel auxiliary β subunits have been shown to modulate voltage-dependent inactivation of various types of Ca2+ channels. The β1 and β2 subunits, that are differentially expressed with the L-type α1 Ca2+ channel subunit in heart, muscle and brain, can specifically modulate the Ca2+-dependent inactivation kinetics. Their expression in Xenopus oocytes with the α1C subunit leads, in both cases, to biphasic Ca2+ current decays, the second phase being markedly slowed by expression of the β2 subunit. Using a series of β subunit deletion mutants and chimeric constructs of β1 and β2 subunits, we show that the inhibitory site located on the amino-terminal region of the β2a subunit is the major element of this regulation. These results thus suggest that different splice variants of the β2 subunit can modulate, in a specific way, the Ca2+ entry through L-type Ca2+ channels in different brain or heart regions.
- Published
- 1999
- Full Text
- View/download PDF
37. Functional reassembly of the anion transport domain of human red cell band 3 (AE1) from multiple and non-complementary fragments
- Author
-
Michael J. A. Tanner, Jonathan D. Groves, and Lin Wang
- Subjects
Models, Molecular ,DNA, Complementary ,Anion exchanger ,Biophysics ,Xenopus ,Polymerase Chain Reaction ,Biochemistry ,Protein Structure, Secondary ,Band 3 protein ,Xenopus laevis ,03 medical and health sciences ,chemistry.chemical_compound ,Protein structure ,Structural Biology ,Anion Exchange Protein 1, Erythrocyte ,Complementary DNA ,Genetics ,Animals ,Humans ,Glycophorin ,Cloning, Molecular ,Molecular Biology ,Peptide sequence ,Band 3 ,Xenopus oocytes ,030304 developmental biology ,0303 health sciences ,Binding Sites ,biology ,Erythrocyte Membrane ,030302 biochemistry & molecular biology ,Membrane protein fragment ,Cell Biology ,biology.organism_classification ,Peptide Fragments ,Recombinant Proteins ,Transmembrane protein ,3. Good health ,chemistry ,Protein Biosynthesis ,Oocytes ,biology.protein ,Female ,Chloride transport ,Heterologous expression ,DNA - Abstract
We constructed cDNA clones encoding N-terminal, C-terminal and internal polypeptide fragments of the human red cell anion exchanger (band 3; AE1). The internal fragments comprised between one and seven putative transmembrane spans with two or more spans deleted from both termini of the membrane domain of band 3. Sets of three, four or five complementary fragments, which together represented the complete amino acid sequence of the membrane domain, were co-expressed in Xenopus oocytes. Stilbene disulphonate-sensitive chloride uptake assays revealed that all six of the three-fragment combinations and two of the four-fragment combinations reassembled functionally in vivo. Unexpectedly, co-expression of a non-complementary pair of fragments comprising the first five and last seven putative transmembrane spans (i.e. entirely lacking spans six and seven) was also found to be sufficient to generate stilbene disulphonate-sensitive chloride uptake.
- Published
- 1998
- Full Text
- View/download PDF
38. The chaperone FdsC for Rhodobacter capsulatus formate dehydrogenase binds the bis-molybdopterin guanine dinucleotide cofactor
- Author
-
Nadine Böhmer, Silke Leimkühler, and Tobias Hartmann
- Subjects
Guanine ,Biophysics ,Coenzymes ,Chaperone ,bis-MGD ,Formate dehydrogenase ,Biochemistry ,Cofactor ,Rhodobacter capsulatus ,Substrate Specificity ,chemistry.chemical_compound ,Structural Biology ,Genetics ,Molybdenum cofactor ,l-cysteine desulfurase ,Molecular Biology ,Institut für Biochemie und Biologie ,Conserved Sequence ,chemistry.chemical_classification ,Rhodobacter ,biology ,Oxidoreductases, N-Demethylating ,Cell Biology ,biology.organism_classification ,Formate Dehydrogenases ,Guanine Nucleotides ,Protein Structure, Tertiary ,Pterins ,Enzyme ,chemistry ,Chaperone (protein) ,biology.protein ,Heterologous expression ,Molecular Chaperones ,Protein Binding - Abstract
Molybdoenzymes are complex enzymes in which the molybdenum cofactor (Moco) is deeply buried in the enzyme. Most molybdoenzymes contain a specific chaperone for the insertion of Moco. For the formate dehydrogenase FdsGBA from Rhodobacter capsulatus the two chaperones FdsC and FdsD were identified to be essential for enzyme activity, but are not a subunit of the mature enzyme. Here, we purified and characterized the FdsC protein after heterologous expression in Escherichia coli. We were able to copurify FdsC with the bound Moco derivate bis-molybdopterin guanine dinucleotide. This cofactor successfully was used as a source to reconstitute the activity of molybdoenzymes. Structured summary of protein interactions: FdsC and FdsC bind by molecular sieving (View interaction) FdsD binds to RcMobA by surface plasmon resonance (View interaction) FdsC binds to RcMobA by surface plasmon resonance (View interaction) FdsC binds to FdsA by surface plasmon resonance (View interaction)
- Published
- 2013
39. Expression and pharmacological characterization of the human μ-opioid receptor in the methylotrophic yeastPichia pastoris
- Author
-
Franck Talmont, Laurent J. Emorine, Stéphane Sidobre, Pascal Demange, Alain Milon, Institut de pharmacologie et de biologie structurale (IPBS), Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), and Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
- Subjects
Narcotics ,medicine.drug_class ,Narcotic Antagonists ,Recombinant Fusion Proteins ,[SDV]Life Sciences [q-bio] ,Saccharomyces cerevisiae ,Receptors, Opioid, mu ,Biophysics ,Diprenorphine ,Gene Expression ,Membrane receptor ,Biochemistry ,Pichia ,Pichia pastoris ,03 medical and health sciences ,Structural Biology ,Opioid receptor ,Cell surface receptor ,Genetics ,medicine ,Humans ,Molecular Biology ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,0303 health sciences ,Dose-Response Relationship, Drug ,biology ,Methylotrophic yeast ,Chemistry ,Cell Membrane ,030302 biochemistry & molecular biology ,μ-Opioid receptor ,Cell Biology ,biology.organism_classification ,Molecular biology ,Yeast ,3. Good health ,Heterologous expression ,Opioid antagonist ,medicine.drug - Abstract
The human mu-opioid receptor cDNA from which the 32 amino-terminal codons were substituted by the Saccharomyces cerevisiae alpha-mating factor signal sequence has been expressed in the methylotrophic yeast Pichia pastoris using the host promoter of the alcohol oxidase-1 gene. Cell membranes exhibited specific and saturable binding of the opioid antagonist [3H]diprenorphine (Kd = 0.2 nM and Bmax = 400 fmol/mg protein or 800 sites/cell). Competition studies with non-selective, and mu-, delta- and kappa-selective opioid agonists and antagonists revealed a typical mu-opioid receptor binding profile, suggesting proper folding of the protein in yeast membranes.
- Published
- 1996
- Full Text
- View/download PDF
40. Cloning, sequencing and functional assignment of the chlorophyll biosynthesis gene,chlP, ofSynechocystissp. PCC 6803
- Author
-
Hugh A. Addlesee, C. Neil Hunter, Lucien C.D. Gibson, and Poul Erik Jensen
- Subjects
Molecular Sequence Data ,Photosynthetic Reaction Center Complex Proteins ,Mutant ,Light-Harvesting Protein Complexes ,Biophysics ,Rhodobacter sphaeroides ,macromolecular substances ,Cyanobacteria ,Biochemistry ,chemistry.chemical_compound ,Hydrogenase ,Bacterial Proteins ,Biosynthesis ,Geranylgeraniol ,Phytol ,Structural Biology ,Genetics ,Amino Acid Sequence ,Photosynthesis ,Rhodobacter ,Cloning, Molecular ,(Bacterio)chlorophyll ,Bacteriochlorophylls ,Molecular Biology ,Base Sequence ,Sequence Homology, Amino Acid ,biology ,Genetic Complementation Test ,Synechocystis ,Sequence Analysis, DNA ,Cell Biology ,biology.organism_classification ,Open reading frame ,Phenotype ,chemistry ,Spectrophotometry ,Hydrogenation ,Heterologous expression ,Diterpenes - Abstract
A gene from the cyanobacterium Synechocystis sp. PCC 6803 has been cloned and sequenced, and subsequently used to partially complement a bchP mutant of the purple photosynthetic bacterium Rhodobacter sphaeroides. This mutant is blocked in the terminal hydrogenation steps of bchla biosynthesis and possesses only bchl esterified with geranylgeraniol. It also has a reduced cellular level of the light-harvesting LH2 complex, and the 850 nm absorbance maximum of LH2 is red-shifted by approximately 6 nm. Upon heterologous expression of the Synechocystis bchP homologue, not only are hydrogenated forms of bchlaGG detectable, but the level of LH2 is increased and the red-shift reversed by several nm. We conclude that this gene, which we term chlP, encodes the enzyme catalysing the stepwise hydrogenation of geranylgeraniol to phytol during chla biosynthesis.
- Published
- 1996
- Full Text
- View/download PDF
41. Expression of rat chymotrypsinogen in yeast: a study on the structural and functional significance of the chymotrypsinogen propeptide
- Author
-
István Venekei, William J. Rutter, and László Gráf
- Subjects
Chymotrypsinogen ,Polymerase Chain Reaction ,Biochemistry ,Substrate Specificity ,chemistry.chemical_compound ,Structural Biology ,Chymotrypsin ,Disulfides ,Cloning, Molecular ,Zymogen activation ,0303 health sciences ,Kunitz STI protease inhibitor ,biology ,Goats ,030302 biochemistry & molecular biology ,Recombinant Proteins ,3. Good health ,Dogfish ,Trypsinogen ,Molecular Sequence Data ,Biophysics ,Saccharomyces cerevisiae ,digestive system ,Cell Line ,03 medical and health sciences ,Dogs ,Zymogen ,Genetics ,Animals ,Amino Acid Sequence ,Horses ,Protein folding ,Protein precursor ,Molecular Biology ,DNA Primers ,Gene Library ,030304 developmental biology ,Sheep ,Disulfide bond ,Base Sequence ,Sequence Homology, Amino Acid ,Cell Biology ,Rats ,Enzyme Activation ,Kinetics ,chemistry ,Mutagenesis, Site-Directed ,biology.protein ,Cattle ,Heterologous expression - Abstract
The role of the propeptide sequence and a disulfide bridge between sites 1 and 122 in chymotrypsin has been examined by comparing enzyme activities of wild-type and mutant enzymes. The kinetic constants of mutants devoid of the Cys1-Cys122 disulfide-linked propeptide show that this linkage is not important either for activity or substrate specificity. However this linkage appears to be the major factor in keeping the zymogen stable against non-specific activation. A comparison of zymogen stabilities showed that the trypsinogen propeptide is ten times more effective than the chymotrypsinogen propeptide in preventing non-specific zymogen activation during heterologous expression and secretion from yeast. This feature can also be transferred in trans to chymotrypsinogen; i.e. the chymotrypsin trypsin propeptide chimera forms a stable zymogen.
- Published
- 1996
- Full Text
- View/download PDF
42. Expression of functional mouse 5-HT5Aserotonin receptor in the methylotrophic yeastPichia pastoris: pharmacological characterization and localization
- Author
-
Hartmut Michel, H M Weiss, Helmut Reiländer, and Winfried Haase
- Subjects
Recombinant Fusion Proteins ,Genetic Vectors ,Biophysics ,Binding, Competitive ,Biochemistry ,Pichia ,Pichia pastoris ,law.invention ,Proto-Oncogene Proteins c-myc ,Mice ,Transformation, Genetic ,Structural Biology ,law ,Complementary DNA ,Receptor affinity ,Genetics ,Animals ,5-HT5A receptor ,Cloning, Molecular ,Microscopy, Immunoelectron ,Receptor ,Molecular Biology ,Immunogold electron microscopy ,biology ,Membrane Proteins ,Pichia pastoris: Membrane protein ,Cell Biology ,Mouse 5-HT5A receptor ,biology.organism_classification ,Molecular biology ,Lysergic Acid Diethylamide ,Transformation (genetics) ,Membrane protein ,Receptors, Serotonin ,Recombinant DNA ,Heterologous expression - Abstract
The methylotrophic yeast Pichia pastoris was tested for heterologous expression of the mouse 5-HT5A receptor. Three different expression plasmids were constructed where the cDNA of the receptor was cloned under the transcriptional control of the highly inducible promoter of the P. pastoris alcohol oxidase 1 (AOX1) gen. The expression plasmids differed with respect to the signal sequences used for N-terminal fusion. In two cases the coding region was additionally fused to the c-myc tag to permit immunological detection of the receptor. Expression of functional receptor after transformation of strain GS115 was detected by radioligand binding using [3H]LSD. The construct with the best expression levels in strain GS115 was used for transformation of the protease deficient strain SMD1163. Here, the expression level was 2-8 times higher. Whole cells as well as crude membrane preparations of recombinant clones showed saturable binding of [3H]LSD with a Kd of approximately 1.9 nM. Receptor concentrations of approximately 22 pmol/mg membrane protein revealed the potential of the P. pastoris expression system for high level expression of membrane proteins. The pharmacological properties were comparable to those reported for the receptor expressed in mammalian systems.
- Published
- 1995
- Full Text
- View/download PDF
43. Non-replicating vaccinia vector efficiently expresses bacteriophage T7 RNA polymerase
- Author
-
Marion Ohlmann, Volker Erfle, and Gerd Sutter
- Subjects
Chloramphenicol O-Acetyltransferase ,Gene Expression Regulation, Viral ,Expression vector ,Recombinant Fusion Proteins ,viruses ,Genetic Vectors ,Molecular Sequence Data ,Biophysics ,Vaccinia virus ,Chick Embryo ,Biology ,Virus Replication ,Recombinant virus ,complex mixtures ,Biochemistry ,Virus ,Viral Proteins ,chemistry.chemical_compound ,Genes, Reporter ,Structural Biology ,Host restriction ,Genetics ,medicine ,Animals ,Humans ,T7 RNA polymerase ,Promoter Regions, Genetic ,Molecular Biology ,Cells, Cultured ,Reporter gene ,Base Sequence ,Attenuation ,DNA-Directed RNA Polymerases ,Haplorhini ,Cell Biology ,Fibroblasts ,beta-Galactosidase ,Virology ,Molecular biology ,chemistry ,Viral replication ,Poxvirus ,Heterologous expression ,Vaccinia ,HeLa Cells ,medicine.drug - Abstract
Modified vaccinia virus Ankara (MVA), a host range restricted and highly attenuated vaccinia virus strain, is unable to multiply in human and most other mammalian cell lines. Since viral gene expression is unimpaired in non-permissive cells recombinant MVA viruses are efficient as well as exceptionally safe expression vectors. We constructed a recombinant MVA that expresses the bacteriophage T7 RNA polymerase and tested its usefulness for transient expression of recombinant genes under the control of a T7 promoter. Using the chloramphenicol acetyltransferase (CAT) gene as a reporter gene, infection with MVA-T7pol allowed efficient synthesis of recombinant enzyme in mammalian cells. Despite the severe host restriction of MVA, enzyme activities induced by infection with MVA-T7pol were similar to those determined after infection with a replication-competent vaccinia-T7pol recombinant virus. Thus, MVA-T7pol may be used as a novel vaccinia vector to achieve T7 RNA polymerase-specific recombinant gene expression in the absence of productive vaccinia virus replication.
- Published
- 1995
- Full Text
- View/download PDF
44. Expression inEscherichia coli, purification and functional activity of recombinant human chaperonin 10
- Author
-
Gianni Gromo, Gianluca Fossati, Giuseppe Legname, Nicoletta Monzini, Daniela Modena, and Fabrizio Marcucci
- Subjects
Protein Folding ,Hot Temperature ,medicine.disease_cause ,Polymerase Chain Reaction ,Biochemistry ,Mass Spectrometry ,law.invention ,Chaperonin ,Serine ,Structural Biology ,law ,Settore BIO/10 - Biochimica ,Tumor Cells, Cultured ,Chaperonin 10 ,Cloning, Molecular ,Chromatography, High Pressure Liquid ,Recombinant ,Liver Neoplasms ,Recombinant Proteins ,Chromatography, Gel ,Recombinant DNA ,Protein Binding ,Human ,Carcinoma, Hepatocellular ,GroES ,Molecular Sequence Data ,Biophysics ,macromolecular substances ,Biology ,GroEL ,Cell Line ,Complementary DNA ,Escherichia coli ,Genetics ,medicine ,Humans ,Molecular Biology ,DNA Primers ,Base Sequence ,E. coli ,Chaperonin 60 ,Cell Biology ,Kinetics ,enzymes and coenzymes (carbohydrates) ,biological sciences ,bacteria ,Heterologous expression - Abstract
We have recently reported the cloning of a cDNA coding for a stress inducible human chaperonin 10. The protein was shown to possess 100% identity with the bovine homologue and a single amino acid replacement (glycine to serine at position 52) compared to rat chaperonin 10. Here we report the heterologous expression of human chaperonin 10 in Escherichia coli, its purification and its functional characterization. The recombinant protein was purified to homogeneity as judged by different analytical techniques, and mass spectrometry analysis showed a MW of 10,801 Da in agreement with the predicted sequence. This molecular weight accounts for a protein which is not modified post-translationally. In fact, natural rat chaperonin 10 has been shown to be acetylated at the N-terminus, a feature suggested to be important for targeting and functional activity. Here we show that recombinant human chaperonin 10 is fully active in assisting the chaperonin 60 GroEL in the refolding of denatured yeast enolase, thereby showing that, at least in the present system, post-translational acetylation is not necessary for its activity.
- Published
- 1995
- Full Text
- View/download PDF
45. Molecular and enzymatic characterization of two stilbene synthases from Eastern white pine (Pinus strobus) A single Arg/His difference determines the activity and the pH dependence of the enzymes
- Author
-
Sigrid Raiber, Gudrun Schröder, and Joachim Schröder
- Subjects
Molecular Sequence Data ,Pinosylvin ,Biophysics ,Biology ,medicine.disease_cause ,Biochemistry ,Substrate Specificity ,Trees ,chemistry.chemical_compound ,Structural Biology ,Escherichia coli ,Genetics ,medicine ,Amino Acid Sequence ,RNA, Messenger ,Cloning, Molecular ,Molecular Biology ,Gene ,Gene Library ,chemistry.chemical_classification ,Sequence Homology, Amino Acid ,cDNA library ,Mutagenesis ,Stilbene synthase ,Cell Biology ,Recombinant Proteins ,Amino acid ,Kinetics ,Enzyme ,Pinus strobus ,chemistry ,Polyketide synthase ,Heterologous expression ,Acyltransferases ,Dihydropinosylvin - Abstract
Pinus strobus (Eastern white pine) contains stilbenes biosynthetically derived from cinnamoyl-CoA (pinosylvin) or dihydrocinnamoyl-CoA (dihydropinosylvin). We screened a P. strobus cDNA library with a stilbene synthase (STS) probe from Pinus sylvestris. The eight isolated cDNAs represented two closely related STS genes with five amino acid differences in the proteins. The enzyme properties were investigated after heterologous expression in Escherichia coli. Both proteins preferred cinnamoyl-CoA against dihydrocinnamoyl-CoA and thus represented pinosylvin synthases. Otherwise they revealed large differences. STS1 had only 3–5% of the activity of STS2, its pH optimum was shifted to lower values (pH 6), and it synthesized with cinnamoyl-CoA a second unknown product. Site-directed mutagenesis demonstrated that a single Arg-to-His exchange in STS1 was responsible for all of the differences. The proton acceptor properties of His are discussed as the reason for the properties of STS1.
- Published
- 1995
- Full Text
- View/download PDF
46. Regulation of cytochromecexpression in the aerobic respiratory yeastKluyveromyces lactis
- Author
-
M. Angeles Freire-Picos, Cornelis P. Hollenberg, M. Esperanza Cerdán, and Karin D. Breunig
- Subjects
Transcription, Genetic ,Molecular Sequence Data ,Saccharomyces cerevisiae ,Mutant ,Biophysics ,Catabolite repression ,Cytochrome c Group ,Regulatory Sequences, Nucleic Acid ,Biochemistry ,Gene Expression Regulation, Enzymologic ,Kluyveromyces ,Transcriptional regulation ,Structural Biology ,Gene Expression Regulation, Fungal ,Genetics ,Cloning, Molecular ,Molecular Biology ,Gene ,Kluyveromyces lactis ,Base Sequence ,biology ,Cytochrome c gene ,Cell Biology ,biology.organism_classification ,Carbon ,Yeast ,Oxygen ,Oligodeoxyribonucleotides ,Heterologous expression - Abstract
Transcriptional regulation of the KlCYC1 gene from the aerobic respiratory yeast Kluyveromyces lactis has been studied. The KlCYC1 gene produces two transcripts of different sizes, in contrast with the single transcripts found for CYC1 and CYC7 from Saccharomyces cerevisiae, and for the CYC gene from Schwanniomyces occidentali. Both KlCYC1 transcripts respond in the same way to the regulatory signals studied here. The transcription of KlCYC1 is regulated by oxygen and this control is mediated by heme. The KlCYC1 gene is also subject to catabolite repression. Heterologous expression in S. cerevisiae mutants reveals that the factors HAP1 and HAP2 take part in the regulatory mechanism.
- Published
- 1995
- Full Text
- View/download PDF
47. Injection of a K+channel (Kv1.3) cRNA in fertilized eggs leads to functional expression in cultured myotomal muscle cells fromXenopusembryos
- Author
-
Eric Guillemare, Jacques Barhanin, Florian Lesage, Eric Honoré, and Michel Lazdunski
- Subjects
Potassium Channels ,Charybdotoxin ,Microinjections ,Biophysics ,Xenopus ,Gene Expression ,Scorpion Venoms ,Cloned K+ channel ,complex mixtures ,Biochemistry ,RNA, Complementary ,Xenopus laevis ,chemistry.chemical_compound ,Structural Biology ,T lymphocyte ,Genetics ,medicine ,Animals ,Myocyte ,Patch clamp ,Molecular Biology ,Cells, Cultured ,Ion channel ,HEPES ,biology ,urogenital system ,Muscles ,Electric Conductivity ,Gene Transfer Techniques ,4-Aminopyridine ,Cell Biology ,biology.organism_classification ,Molecular biology ,chemistry ,Fertilization, in vitro ,Heterologous expression ,medicine.drug - Abstract
The synthetic cRNA encoding for the major T lymphocyte K+ channel (Kv1.3) was injected into Xenopus fertilized eggs. Somites from embryos of stage 20–22 (about 40 h post-fertilization at 19°C) were dissociated and myotomal muscle cells were cultured in vitro for 2 days. The whole cell configuration of the tight seal patch-clamp technique was used to record K+ channel activity in cultured myocytes. These myocytes have two endogenous delayed-rectifiers (sustained and transient) and an inward-rectifier K+ currents, all of which are insensitive to the scorpion toxin charybdotoxin. Cultured myocytes dissociated from embryos injected with the Kv1.3 cRNA expressed the exogenous Kv1.3 channel. The Kv1.3 channel was identified by its physiological (a very low recovery from inactivation) and its pharmacological properties (a high sensitivity to charybdotoxin). This work demonstrates that Xenopus cultured myotomal muscle cells represent a very efficient and practical assay system for the functional expression of cloned ion channels.
- Published
- 1994
- Full Text
- View/download PDF
48. Expression of the human D2Sdopamine receptor in the yeastsSaccharomyces cerevisiaeandSchizosaccharomyces pombe: A comparative study
- Author
-
Hartmut Michel, Peter Sander, Sylvia Grünewald, and Helmut Reiländer
- Subjects
Spiperone ,DNA, Complementary ,Protein Conformation ,Blotting, Western ,Saccharomyces cerevisiae ,Biophysics ,Gene Expression ,D2S dopamine receptor ,Biology ,Biochemistry ,law.invention ,Structural Biology ,law ,Schizosaccharomyces ,Genetics ,medicine ,Humans ,Cloning, Molecular ,Promoter Regions, Genetic ,Molecular Biology ,G protein-coupled receptor ,Binding Sites ,Receptors, Dopamine D2 ,Cell Membrane ,Dopaminergic ,Gene Transfer Techniques ,Cell Biology ,biology.organism_classification ,Molecular biology ,Yeast ,Schizosaccharomyces pombe ,Membrane protein ,G-protein coupled receptor ,Recombinant DNA ,Heterologous expression ,Plasmids ,medicine.drug - Abstract
The yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe were tested for heterologous expression of the human D2S dopamine receptor. The cDNA coding for the dopamine receptor was cloned into high copy number plasmids with inducible promoters. After transformation into the yeasts recombinant clones were examined for the presence of functional receptor by radioligand binding using the antagonist [3H]spiperone. Subsequent Western blot analysis of positive recombinants with an antiserum raised against a peptide from the third intracellular domain of the receptor protein revealed the production of a protein with an apparent molecular mass of 40 kDa in both yeasts. Membranes harvested from recombinant yeast clones exhibited saturable binding of the dopaminergic antagonist [3H]spiperone with Kd values of 1.3 nM in S. cerevisiae and 0.25 nM in S. pombe. The rank order of potencies for several dopaminergic ligands to displace specific [3H]spiperone binding to membranes were the same in both yeasts, whereas the affinities for ligands differed significantly.
- Published
- 1994
- Full Text
- View/download PDF
49. Biochemical characterization of a novel ArsA ATPase complex from Alkaliphilus metalliredigens QYMF
- Author
-
Barry P. Rosen, Hiranmoy Bhattacharjee, and Hsueh-Liang Fu
- Subjects
Antimony ,Operon ,Arsenites ,ATPase ,Antimonite ,Biophysics ,medicine.disease_cause ,Gram-Positive Bacteria ,Biochemistry ,Article ,chemistry.chemical_compound ,Structural Biology ,Genetics ,medicine ,Molecular Biology ,Gene ,Escherichia coli ,Arsenite ,Adenosine Triphosphatases ,biology ,ATPase complex ,Cell Biology ,chemistry ,biology.protein ,ArsB ,ArsA ,Heterologous expression ,Detoxification ,Acr3 - Abstract
The two putative ars operons in Alkaliphilus metalliredigens QYMF are distinctive in that the arsA gene is split in halves, amarsA1 and amarsA2, and, acr3 but not an arsB gene coexists with arsA. Heterologous expression of one of the A. metalliredigens ars operons (ars1) conferred arsenite but not antimonite resistance to Δars Escherichia coli. Only the co-expressed AmArsA1 and AmArsA2 displayed arsenite or antimonite stimulated ATPase activity. The results show that AmArsA1–AmArsA2 interaction is needed to form the functional ArsA ATPase. This novel AmArsA1–AmArsA2 complex may provide insight in how it participates with Acr3 in arsenite detoxification.
- Published
- 2010
50. Transmembrane protein 85 from both human (TMEM85) and yeast (YGL231c) inhibit hydrogen peroxide mediated cell death in yeast
- Author
-
Chamel Khoury, Michael T. Greenwood, Aidan J. Solar, Giselle Ring, Zhao Yang, and Craig A. Mandato
- Subjects
Saccharomyces cerevisiae Proteins ,Saccharomyces cerevisiae ,Molecular Sequence Data ,Biophysics ,Apoptosis ,Biochemistry ,03 medical and health sciences ,Structural Biology ,Genetics ,Humans ,Amino Acid Sequence ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,biology ,Genome, Human ,030302 biochemistry & molecular biology ,Alternative splicing ,Membrane Proteins ,Cell Biology ,Hydrogen Peroxide ,biology.organism_classification ,TMEM85 ,Yeast ,Transmembrane protein ,3. Good health ,Anti-apoptosis ,Gene structure ,Transmembrane domain ,Alternative Splicing ,Oxidative Stress ,Membrane protein ,TAF4 ,Heterologous expression - Abstract
Anti-apoptotic proteins are involved in modulating the process of apoptosis. Here, we report the identification of the previously uncharacterized transmembrane domain protein 85 (TMEM85) as a novel anti-apoptotic sequence. Using growth and viability assays, we demonstrate that the heterologous expression of human TMEM85 in yeast promotes growth and prevents cell death in response to oxidative stress. Overexpression of the yeast TMEM85 ortholog (YGL231c) also leads to increased resistance to oxidative stress. Analysis of the existing TMEM85 DNA complimentary to mRNAs revealed that the human TMEM85 gene is alternatively spliced to produce multiple transcripts and proteins. Thus TMEM85 is a complex gene that encodes a novel conserved anti-apoptotic protein.
- Published
- 2008
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.