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Given the increasing use of systematic reviews and meta‐analyses in ecology, their protocols should be closely followed to ensure quality. Several checklists are available to guide researchers towards a high‐quality meta‐analytic study. Freshwater ecology studies have a tradition of using experimental studies, which provide the ideal data to test hypotheses using meta‐analysis.Here, we evaluated the quality of 114 meta‐analyses in freshwater ecology and 86 meta‐analyses in ecology and evolution for comparative purposes.We found that many studies are still using the term meta‐analysis incorrectly and that this error persisted over time. The quality of the studies that did conduct a formal meta‐analysis has improved. Thus, we speculate that available guidelines are being effective in improving the quality of meta‐analytic studies. Quality was not associated with the impact factor of the journal where the meta‐analyses were published or with the average number of citations.In addition to the incorrect use of the term, we found that many studies failed to: report heterogeneity statistics, evaluate temporal changes in effect size, conduct publication bias analyses, address the collinearity among moderators, and provide the data. In general, meta‐analyses in ecology and evolution have only a slightly better average score than meta‐analyses in freshwater ecology.Although the quality of meta‐analyses in freshwater ecology has improved over time, there is much room for improvement. Authors should not label their studies as meta‐analyses if these methods were not used. Compliance with checklists should be widely fostered as meta‐analyses are increasingly being used to summarise findings in different areas of ecology. Authors, reviewers, and editors should use checklists to improve the quality of meta‐analyses in freshwater ecology. [ABSTRACT FROM AUTHOR]

Daphnia are key organisms in pelagic food webs, acting as a food resource for fish and predatory zooplankton and regulating phytoplankton through grazing. Its population dynamic follows regular seasonal patterns, with spring peaks followed by summer population declines (midsummer declines, MSDs). Midsummer declines show high inter‐annual variation, which has been attributed to different causes. However, the mechanisms controlling the MSD remain poorly understood, especially in deep stratified lakes.We tried to disentangle the factors causing Daphnia MSDs in Lake Lugano and Lake Iseo (in Switzerland and Italy), two deep peri‐alpine lakes with similar trophic status and vertical mixing dynamics, characterised by phosphorus accumulation in the hypolimnion and variable mixing during late‐winter turnovers.Specifically, we assessed the effects of three different hypothetical pathways according to which: (1) winter air temperature controls MSDs by influencing mixing depth during turnovers and epilimnetic phosphorus replenishment; (2) vernal air temperature influences MSD by accelerating the timing of spring population peak; and (3) summer temperature influences MSDs by increasing fish predation. We assessed the relative strength of these pathways using structural equation modelling on long‐term datasets for the two lakes (29 years for Lake Lugano and 19 years for Lake Iseo).Between the hypothesised pathways, the one driven by winter air temperature (through P replenishment) influenced Daphnia abundance in spring in both lakes, but the effects propagated to summer Daphnia abundance only in Lake Lugano. Additionally, summer Daphnia abundance was influenced by the summer air temperature through a positive (although weak) effect. By comparison, vernal air temperature had no detectable effects on summer Daphnia abundance.The results revealed marked differences between the meromictic study lakes and the shallow hypertrophic water bodies that were the focus of previous research on Daphnia MSD, and also between the two study lakes. The influence of epilimnetic P replenishment on the summer Daphnia abundance in Lake Lugano, which was recovering from past eutrophication, may have reflected the greater susceptibility of deep, stratified lakes to P depletion after spring compared to shallow hypertrophic lakes or reservoirs. This effect might not have been detected in Lake Iseo because P was more consistently depleted during the study period (i.e. variance in the predictor was too low to detect an effect).This study highlighted the complexity of the effects of climate variability on Daphnia MSD in deep lakes, showing that the responses can differ even between two neighbouring lakes with similar vertical mixing dynamics and trophic status. At the same time, the results suggest that future increases in winter air temperature, caused by global warming, may cause critically low densities of Daphnia during spring and summer and compromise the ability of zooplankton to control phytoplankton biomass. [ABSTRACT FROM AUTHOR]

Although lakes are important sources of methane (CH4) and carbon dioxide (CO2) to the atmosphere contributing to global warming, their CH4 and CO2 emissions are rarely assessed. In particular, increasing inputs of terrestrial dissolved organic carbon (DOC) may affect gas dynamics and alter seasonal changes in gas production.Here, we analysed variations in CH4 and CO2 dynamics in sub‐basins of an acidic bog lake, which was artificially divided into four quarters three decades ago, leading to divergence in water chemistry and biology. In the divided lake, only the south‐west basin (SW) received DOC inputs from an adjacent peat bog, while the north‐east basin (NE) was hydrologically disconnected. A year‐long determination of CH4 and CO2 production and emission patterns in the two contrasting basins exposed the indirect mechanisms by which DOC supply exercised control on greenhouse gas dynamics in this shallow lake.In both basins, dissolved CH4 was negatively correlated with dissolved oxygen (O2) through the water column, suggesting that aerobic methanotrophy is an important regulator of CH4 emissions in this lake. In contrast, the amount of CO2 stored in oxic and anoxic layers was not significantly different between the basins, suggesting that O2 is not the most important driver of dissolved CO2.Estimated total CH4 and CO2 emissions were 2.1 and 1.7 times lower in the NE basin than in the SW basin, with major CH4 and CO2 emissions occurring during the fall turnover. The differences in CH4 and CO2 emissions suggest that the hydro‐physical properties, namely seasonal temperature, the duration of stratification and O2 availability, are the main drivers of CH4 and CO2 emissions to the atmosphere from small shallow lakes under the influence of DOC inputs under global warming pressure. [ABSTRACT FROM AUTHOR]

Abstract: Páramos are high‐altitude ecosystems of grasslands and shrubs that sustain high levels of biodiversity and contain numerous lakes, ponds and wetlands that are a crucial source of water for millions. In the Andes, limnological data are rare from páramos and particularly so from shallow waterbodies that are prominent features of the landscape. Here, we analyse fossil diatom assemblages using dated sediment cores from three shallow lakes in the páramo of southern Ecuador and document their response to recent climate changes. The two shallowest sites were <0.5 m deep and contained nearly identical diatom assemblages, dominated by Achnanthidium minutissimum and other benthic taxa. The deepest study site, at 4 m depth, differed notably from its shallower counterparts in that the dominant taxa were tychoplanktonic Aulacoseira species. All three study sites showed only minor assemblage shifts over the past ˜200 years. This contrasts sharply with paleolimnological data from nearby deep lakes (Zmax > 17 m) that recorded abrupt changes in diatom phytoplankton coincident with the onset of higher temperatures, reduced wind speeds and the onset of thermal stratification in recent decades. In temperate and high‐latitude regions, an overriding factor influencing freshwater ecosystems is the duration and extent of ice cover, which itself is closely linked to climate variables. In contrast, there is no winter ice cover and the growing season is continuous year round in our equatorial Andean sites. Instead, rising temperatures are affecting deep lakes primarily by altering the physical structure of the water column resulting in greater periods of thermal stratification, which in turn drives changes in biota and other lake processes. However, this mechanism of change only affects deep lakes because shallow waterbodies are easily mixed by wind. Our data demonstrate the differential response of large, deep lakes in the páramo compared to the relative complacency of changes in shallow waterbodies, which is in marked contrast to similar sites affected by seasonal ice cover. [ABSTRACT FROM AUTHOR]

The tropical Andes has a high density of glacial lakes that are situated in the high-altitude páramo (3500-4500 m). Ecological information about such lakes is scant despite the fact that these lakes are an important source of water for drinking, irrigation and electricity generation and feed several major tributaries of the Amazon. In this study, we provide data on a survey of 31 lakes in Cajas National Park (Ecuador). Two of the lakes were monitored monthly during one year. In situ nutrient addition experiments were carried out in three of the lakes., Seasonal monitoring in two lakes revealed a thermal stratification of the water column between October and June, with a small temperature difference between epi- and hypolimnion (2-3 °C). Oxygen depletion of the hypolimnion towards the end of the stratification period indicated that no complete mixing of the water column occurred during stratification. There was no evidence of depletion of nutrients in the epilimnion or accumulation in the hypolimnion during stratification. There were also no clear seasonal changes in chlorophyll- a (Chl- a) concentration nor in phytoplankton community composition in the two lakes., Inputs of dissolved organic carbon (DOC) from the vegetated catchment resulted in high DOC concentrations (median 2.9 mg L−1) compared to temperate mountain lakes. Water transparency was relatively low, with a median extinction coefficient for photosynthetic active radiation of 0.50 m−1 and for UV-B radiation of 10.13 m−1. Although the thermocline was deep and water transparency was low, estimates of the critical depth for photosynthesis were deeper than the mean water depth in all lakes, suggesting that phytoplankton was not light limited., The phytoplankton community was dominated by chlorophytes (e.g. Oocystis), diatoms (small Cyclotella spp.) or small colonial cyanobacteria ( Aphanocapsa, Merismopedia). The zooplankton community was either dominated by large cladocerans and cyclopoid copepods, or by the calanoid copepod Boeckella occidentalis., Total concentrations of phosphorus (P) and nitrogen (N) were comparable to those in temperate mountain lakes (4-35 μg P L−1 and 162-758 μg N L−1) while Chl- a concentrations were in the lower range (<1 μg L−1). A large part of the total nutrient pool consists of dissolved organic N and P that appeared to have a low bioavailability to phytoplankton. The median seston N:P ratio of 44, a positive correlation between Chl- a and total P concentration, as well as nutrient addition assays carried out in three lakes all pointed to P limitation of phytoplankton. [ABSTRACT FROM AUTHOR]

Quantifying lake biogeochemical processing at broad spatial scales requires that we scale processes along with physical metrics. Past work has primarily scaled lentic processes using estimates of lake surface area. However, many processes important to lakes, such as material, energy and biological fluxes and biogeochemical cycling, scale with lake perimeter., We estimate the total lake perimeter for the contiguous United States (U.S.) and examine the sensitivity of this estimate to measurement resolution. At the original mapping resolution, lakes in the contiguous U.S. have a total perimeter of over 1.8 million km., The change in measured perimeter versus measurement resolution for the contiguous U.S. had a log-log slope (also known as the fractal dimension) of −0.21, generally less than previously reported estimates. With changing observation resolution, total measured perimeter was most sensitive to the inclusion or exclusion of small lakes, not shoreline complexity., The total aquatic-terrestrial interface in lakes is less than one-tenth that of streams and rivers, which collectively account for over 21 million km of shoreline in the contiguous U.S. This study further describes the distribution of lake perimeter and proposes a technique that can contribute to understanding continental-scale processes. [ABSTRACT FROM AUTHOR]

1. As future climate change is expected to have a major impact on freshwater lake ecosystems, it is important to assess the extent to which changes taking place in freshwater lakes can be attributed to the degree of climate change that has already taken place. 2. To address this issue, it is necessary to examine evidence spanning many decades by combining long-term observational data sets and palaeolimnological records. 3. Here, we introduce a series of case studies of seven European lakes for which both long-term data sets and sediment records are available. Most of the sites have been affected by eutrophication and are now in recovery. 4. The studies attempt to disentangle the effects of climate change from those of nutrient pollution and conclude that nutrient pollution is still the dominant factor controlling the trophic state of lakes. 5. At most sites, however, there is also evidence of climate influence related in some cases to natural variability in the climate system, and in others to the trend to higher temperatures over recent decades attributed to anthropogenic warming. 6. More generally and despite some problems, the studies indicate the value of combining limnological and palaeolimnological records in reconstructing lake history and in disentangling the changing role of different pressures on lake ecosystems. [ABSTRACT FROM AUTHOR]

1. A long-term monitoring programme on phytoplankton and physicochemical characteristics of Esthwaite Water (England) that started in 1945 provides a rare opportunity to understand the effects of climate and nutrients on a lake ecosystem. 2. Monitoring records show that the lake experienced nutrient enrichment from the early 1970s, particularly after 1975, associated with inputs from a local sewage treatment plant, resulting in marked increases in concentration of soluble reactive phosphorus (SRP). Climatic variables, such as air temperature (AirT) and rainfall, exhibit high variability with increasing trends after 1975. 3. Diatom analyses of an integrated 210Pb-dated lake sediment core from Esthwaite Water, covering the period from 1945 to 2004, showed that fossil diatoms exhibited distinct compositional change in response to nutrient enrichment. 4. Redundancy analysis (RDA) based on diatom and environmental data sets over the past 60 years showed that the most important variables explaining diatom species composition were winter concentrations of SRP, followed by AirT, independently explaining 22% and 8% of the diatom variance, respectively. 5. Additive models showed that winter SRP was the most important factor controlling the diatom assemblages for the whole monitoring period. AirT had little effect on the diatom assemblages when nutrient levels were low prior to 1975. With the increase in nutrient availability during the eutrophication phase after 1975, climate became more important in regulating the diatom community, although SRP was still the major controlling factor. 6. The relative effects of climate and nutrients on diatom communities vary depending on the timescale. RDA and additive model revealed that climate contributed little to diatom dynamics at an annual or decadal scale. 7. The combination of monitoring and palaeolimnological records employed here offers the opportunity to explore how nutrients and climate have affected a lake ecosystem over a range of timescales. This dual approach can potentially be extended to much longer timescales (e.g. centuries), where long-term, reliable observational records exist. [ABSTRACT FROM AUTHOR]

1. As long-term observational lake records continue to lengthen, the historical overlap with lake sediment records grows, providing increasing opportunities for placing the contemporary ecological status of lakes in a temporal perspective. 2. Comparisons between long-term data sets and sediment records, however, require lake sediments to be accurately dated and for sediment accumulation rates to be sufficiently rapid to allow precise matching with observational data. 3. The critical role of the sediment record in this context is its value in tracking the changing impact of human activity on a lake from a pre-disturbance reference through to the present day. 4. Here, we use data from a range of lakes across Europe presented as case studies in this Special Section. The seven sites considered all possess both long-term observational records and high-quality sediment records. Our objective is to assess whether recent climate change is having an impact on their trophic status and in particular whether that impact can be disentangled from the changes associated with nutrient pollution. 5. The palaeo-data show clear evidence for the beginning of nutrient pollution varying from the mid-nineteenth century at Loch Leven to the early and middle twentieth century at other sites. The monitoring data show different degrees of recovery when judged against the palaeo-reference. 6. The reason for limited recovery is attributed to continuing high nutrient concentrations related to an increase in diffuse nutrient loading or to internal P recycling, but there is some evidence that climate change may be playing a role in offsetting recovery at some sites. If this is the case, then lake ecosystems suffering from eutrophication may not necessarily return to their pre-eutrophication reference status despite the measures that have been taken to reduce external nutrient loading. 7. The extent to which future warming might further limit such recovery can be evaluated only by continued monitoring combined with the use of palaeo-records that set the pre-eutrophication reference. [ABSTRACT FROM AUTHOR]

1. Shallow lakes are often cited as classic examples of systems that exhibit trophic cascades but, whilst they provide good model systems with which to test general ecological theory and to assess long-term community change, their food web linkages have rarely been resolved, so changes associated with the structure and dynamics of the ecological network as a whole are still poorly understood. 2. We sought to redress this, and to demonstrate the potential benefits of integrating palaeolimnological and contemporary data, by constructing highly resolved food webs and stable isotope derived measures of trophic interactions and niche space, for the extant communities of two shallow U.K. lakes from different positions along a gradient of eutrophication. The contemporary surface sediment cladoceran and submerged macrophyte assemblages in the less enriched site, Selbrigg Pond, matched the palaeolimnological assemblages of the more enriched site, Felbrigg Hall Lake, in its more pristine state during the 1920s. Thus, Selbrigg was a temporal analogue for Felbrigg, from which the consequences of long-term eutrophication on food web structure could be inferred. These data represent the first steps towards reconstructing not only past assemblages (i.e. nodes within a food web), but also past interactions (i.e. links within a food web): a significant departure from much of the previous research in palaeolimnology. 3. The more eutrophic food web had far fewer nodes and links, and thus a less reticulate network, than was the case for the more pristine system. In isotopic terms, there was vertical compression in δ15N range (NR) and subsequent increased overlap in isotopic niche space, indicating increased trophic redundancy within Felbrigg. This structural change, which was associated with a greater channelling of energy through a smaller number of nodes as alternative feeding pathways disappear, could lead to reduced dynamic stability, pushing the network towards further simplification. These changes reflected a general shift from a benthic-dominated towards a more pelagic system, as the plant-associated subweb eroded. 4. Although these data are among the first of their kind, the palaeo-analogue approach used here demonstrates the huge potential for applying food web theory to understand how and why these ecological networks change during eutrophication. Furthermore, because of the rich biological record preserved in their sediments, shallow lakes represent potentially important models for examining long-term intergenerational dynamics, thereby providing a means by which models and data can be integrated on meaningful timescales – a goal that has long proved elusive in food web ecology. [ABSTRACT FROM AUTHOR]

1. Shallow lakes and their ectothermic inhabitants are particularly vulnerable to the effects of climatic warming. These impacts are likely to depend on nutrient loading, especially if the combination of warming and eutrophication leads to severe hypoxia. 2. To investigate effects of realistic warming and nutrient loading on a fish species with high tolerance of warming and hypoxia, we observed population changes and timing of reproduction of three-spined sticklebacks in 24 outdoor shallow freshwater ecosystems with combinations of temperature (ambient and ambient +4 °C) and three nutrient treatments over 16 months. 3. Warming reduced stickleback population biomass by 60% (population size by 76%) and nutrient-addition reduced biomass by about 80% (population size 95%). Nutrients and warming together resulted in extinction of the stickleback populations. These losses were mainly attributed to the increased likelihood of severe hypoxia in heated and nutrient-addition mesocosms. 4. Warming of nutrient-rich waters can thus have dire consequences for freshwater ectotherm populations. The loss even of a hardy fish suggests a precarious future for many less tolerant species in such eutrophic systems under current climate change predictions. [ABSTRACT FROM AUTHOR]

1. The Yangtze floodplain (SE China) is characterized by a number of large shallow lakes, many of which have undergone eutrophication due to the intensification of agriculture and urban growth over recent decades. As monitoring data are limited and in order to determine lake baseline nutrient concentrations, 49 lakes were sampled, covering a total phosphorus (TP) gradient ( c. 30–550 μg L−1) to develop a diatom-based inference model. 2. There are three dominant diatom assemblages in these shallow lakes with a marked change in assemblage structure near the boundary between eutrophic and hypereutrophic nutrient levels (as indicated by their TP value). Canonical correspondence analysis indicated that TP was the most important and significant variable in explaining the diatom distributions, independently accounting for 9.5% variance of diatoms. 3. Forty-three lakes were used to generate a transfer function using weighted averaging (WA) with inverse deshrinking. This model had low predictive error (root mean squared error of prediction; RMSEPjack = 0.12) and a high coefficient of prediction ( R2jack = 0.82), comparable with regional TP models elsewhere. The good performance of this TP model may reflect the low abundance of benthic diatom species which are commonly regarded as the main error source in European shallow lake WA models. 4. The WA model was used to reconstruct the past-TP concentrations for Taibai Lake, a shallow hypereutrophic lake in Hubei province. The results showed that TP concentration varied slightly (43–62 μg L−1) prior to the 1920s, indicating an eutrophic state since the 1800s. A period of sustained eutrophication occurred after 1950, because of the development of agriculture, reflecting by maximum values of Aulacoseira alpigena and increased abundance of Cyclotella meneghiniana, C. atomus and Cyclostephanos dubius. The steep increase in nutrient concentration after 1970 was related to the overuse of chemical fertilizer and fish farming in the catchment. 5. The shift in fossil diatoms from epiphytic to planktonic forms in the lake sediment core during 1950–70 provides useful information on the transformation from macrophyte-dominated to alga-dominated states. It is plausible that the TP concentration of 80–110 μg L−1 observed in this study is the critical range for switching between the two stable states in the lake. 6. The regional diatom-TP model developed in this study allows, therefore, the possibility of reconstructing historical background nutrient concentrations in lakes. It will provide an indication of the onset and development of eutrophication at any site. This is particularly important for the many lakes in the Yangtze floodplain where information about historical changes in water quality is lacking. [ABSTRACT FROM AUTHOR]

1. We studied the effects of increased water temperatures (0–4.5 °C) and nutrient enrichment on the stoichiometric composition of different primary producers (macrophytes, epiphytes, seston and sediment biofilm) and invertebrate consumers in 24 mesocosm ecosystems created to mimic shallow pond environments. The nutrient ratios of primary producers were used as indicative of relative nitrogen (N) or phosphorus (P) limitation. We further used carbon stable isotopic composition (δ13C) of the different primary producers to elucidate differences in the degree of CO2 limitation. 2. Epiphytes were the only primary producer with significantly higher δ13C in the enriched mesocosms. No temperature effects were observed in δ13C composition of any primary producer. Independently of the treatment effects, the four primary producers had different δ13C signatures indicative of differences in CO2 limitation. Seston had signatures indicating negligible or low CO2 limitation, followed by epiphytes and sediment biofilm, with moderate CO2 limitation, while macrophytes showed the strongest CO2 limitation. CO2 together with biomass of epiphytes were the key variables explaining between 50 and 70% of the variability in δ13C of the different primary producers, suggesting that epiphytes play an important role in carbon flow of temperate shallow lakes. 3. The ratio of carbon to chlorophyll a decreased with increasing temperature and enrichment in both epiphytes and seston. The effects of temperature were mainly attributed to changes in algal Chl a content, while the decrease with enrichment was probably a result of a higher proportion of algae in the seston and epiphytes. 4. Macrophytes, epiphytes and seston decreased their C : N with enrichment, probably as an adaptation to the different N availability levels. The C : N of epiphytes and Elodea canadensis decreased with increasing temperature in the control mesocosms. Sediment biofilm was the only primary producer with lower C : P and N : P with enrichment, probably as a result of higher P accumulation in the sediment. 5. Independently of nutrient level and increased temperature effects the four primary producers had significantly different stoichiometric compositions. Macrophytes had higher C : N and C : P and, together with epiphytes, also the highest N : P. Seston had no N or P limitation, while macrophytes and epiphytes may have been P limited in a few mesocosms. Sediment biofilm indicated strong N deficiency. 6. Consumers had strongly homeostatic stoichiometric compositions in comparison to primary producers, with weak or no significant treatment effects in any of the groups (insects, leeches, molluscs and crustaceans). Among consumers, predators had significantly higher N content and lower C : N than grazers. [ABSTRACT FROM AUTHOR]

1. Autochthonous sources of organic matter appear to make a minor contribution to food webs in temperate forest streams, but their roles in supporting consumer biomass in tropical lotic environments have received little attention. We investigated the importance of autochthonous and allochthonous food sources to Brotia hainanensis (Pachychilidae), a detritivorous and algivorous snail common in Hong Kong hillstreams, using experimental dietary manipulations and assimilation-based analyses, including stoichiometry, carbon (C) and nitrogen (N) stable isotopes and fatty acid (FA) profiles. 2. Juvenile B. hainanensis collected in Pak Ngau Shek Stream were cultured under controlled laboratory conditions and fed for 2 months with either conditioned Liquidambar formosana (Hamamelidaceae) leaf litter or periphyton. Samples of B. hainanensis were also collected from the stream at the end of the experiment for comparison with snails reared in the laboratory. 3. Periphyton and leaf litter exhibited marked differences in C/N ratios, δ13C and δ15N values and FA profiles. Stable isotope analysis and FA profiling of laboratory-reared and field-collected B. hainanensis both confirmed that snails relied primarily on autochthonous foods, especially periphytic diatoms and cyanobacteria. Stoichiometry results indicated that periphyton was a more nutritious food (with lower C/N ratio) than leaf litter. 4. This is the first study demonstrating that the combined use of stable isotopes and FA profiles is an effective diagnostic tool to trace the basal food sources of consumers in natural stream habitats. Our findings further support the hypothesis that primary production in tropical streams is generally more important to aquatic consumers than inputs of terrestrial detritus. [ABSTRACT FROM AUTHOR]

1. The glacial relict, Mysis relicta, which occurs mainly in unproductive cold water habitats, shows increased mortality rates in temperatures above 16–18 °C. Using a 12-year data set the growth, mortality and fat stores of Mysis in Lough Neagh, an increasingly hypertrophic lake which lacks a thermal refuge and which is subject to warming, were investigated. 2. Mysis showed a significant reduction in fat stores on reaching sexual maturity, contrary to studies elsewhere. 3. The contributions of temperature and eutrophication (total phosphorus, chlorophyll- a concentrations) to growth, mortality and the timing and duration of developmental events were investigated by regression. 4. Water temperatures rose between 1994 and 2005 and the time when temperatures exceeded 16 °C doubled over this period. Juvenile and adult growth rates declined and the duration of the juvenile stage increased in warmer years. Eutrophication also affected these variables but, in general, to a lesser extent than temperature. 5. Year class strength (YCS) declined by a factor of 10 over the study period. YCS was independent of temperature up to 2000 °C degree days (>4 °C) but declined steeply above that point. Temperature was more important than eutrophication in predicting mortality and YCS. YCS was positively correlated with the length of time water temperature was below 7 °C, the upper temperature for Mysis breeding. 6. An established bioenergetic model predicted that water temperature and the timing of embryo release would have appreciable effects on Mysis viability. It also indicated that Mysis would lose mass at summer temperatures, consistent with the observed fat decline. [ABSTRACT FROM AUTHOR]

1. Periphytic diatoms, macrophytes, benthic macroinvertebrates and fish were sampled with standard methods in 185 streams in nine European countries to compare their response to degradation. Streams were classified into two main stream type groups (i.e. lowland, mountain streams); in addition, the lowland streams were grouped into four more specific stream types. 2. Principal components analysis with altogether 43 environmental parameters was used to construct complex stressor gradients for physical-chemical, hydromorphological and land use data. About 30 metrics were calculated for each sample and organism group. Metric responses to different stress types were analysed by Spearman Rank Correlation. 3. All four organism groups showed significant response to eutrophication/organic pollution gradients. Generally, diatom metrics were most strongly correlated to eutrophication gradients (85% and 89% of the diatom metrics tested correlated significantly in mountain and lowland streams, respectively), followed by invertebrate metrics (91% and 59%). 4. Responses of the four organism groups to other gradients were less strong; all organism groups responded to varying degrees to land use changes, hydromorphological degradation on the microhabitat scale and general degradation gradients, while the response to hydromorphological gradients on the reach scale was mainly limited to benthic macroinvertebrates (50% and 44% of the metrics tested correlated significantly in mountain and lowland streams, respectively) and fish (29% and 47%). 5. Fish and macrophyte metrics generally showed a poor response to degradation gradients in mountain streams and a strong response in lowland streams. 6. General recommendations on European bioassessment of streams were derived from the results. [ABSTRACT FROM AUTHOR]

1. Palaeolimnological data and limnological time-series data are highly complementary. Sediment records extend time-scales, integrate subannual variability and expand the range of sites that can be studied, but they suffer from taphonomic biases and occasionally from uncertain chronology. Observational time-series data, on the other hand, are highly resolved but are very limited in extent both in space and time. 2. Palaeolimnological and observational data-sets need to be combined in oligotrophication research to establish (i) the past and present status of lakes needed to identify reference conditions; (ii) changes in ecosystem state; (iii) responses to nutrient reduction; and (iv) the potential role of other factors (e.g. additional stressors, climate change) that might confound predictions of future state. [ABSTRACT FROM AUTHOR]

1. Lake restoration from eutrophication often rests on a simple paradigm that restriction of phosphorus sources will result in recovery of former relatively clear-water states. This view has apparently arisen from early successful restorations of deep lakes in catchments of poorly weathered rocks. Lakes in the lowlands, however, particularly shallow ones, have proved less tractable to restoration. This study of three lowland lakes provides insights that illuminate a more complex picture. 2. The lakes lie in a sequence along a single stream in a mixed urban and rural landscape. Severely deoxygenating effluent from an overloaded sewage treatment works was diverted from the catchment in 1991. Effects on two lakes, Little Mere ( zmax <2 m) and Rostherne Mere ( zmax 31 m) were followed until 2002. Mere Mere ( zmax = 8 m), upstream of the former works, acted as a comparison for changes in water chemistry. Mere Mere showed no change in total phosphorus (TP), total inorganic nitrogen, or planktonic chlorophyll a concentrations. Increased winter rainfall was associated with higher winter soluble reactive phosphorus (SRP) and ammonium concentrations in its water. 3. Little Mere changed from a deoxygenated, highly enriched, fishless system, with large populations of Daphnia magna Straus, clear water and about 40% aquatic plant cover, to a slightly less clear system following diversion. Daphnia magna was replaced by D. hyalina Leydig as fish recolonised. Spring peaks of chlorophyll a declined but summer concentrations increased significantly. Annual mean chlorophyll a concentrations thus showed no change. Submerged plants became more abundant (up to 100% cover), with fluctuating community composition from year to year. Summer release of SRP from the sediment was substantial and has not decreased since 1993. The summer phytoplankton was apparently controlled by nitrogen availability perhaps with some influence of zooplankton grazing. SRP was always very abundant. The lake appeared to have reached a quasi-stable state by 2002. 5. Rostherne Mere showed a steady decline in TP and SRP concentrations following effluent diversion apparently as a result of steady dilution by water with lower phosphorus concentration. Decline in phosphorus concentrations was much less rapid than expected because of internal remobilisation from the hypolimnion and sediments. There have been no changes in chlorophyll a concentration or of nitrogen availability and by 2002 the phytoplankton probably remained limited by a combination of mixing, grazing and nitrogen. 6. A seeming paradox is, thus, that immense changes in phosphorus budgets have shown no consequences for phytoplankton chlorophyll concentrations in either of the lakes, although the seasonal distribution has altered in Little Mere. Although these case studies deviate from others, for both shallow and deep lakes, they represent distinctive situations rather than undermining conventional models. [ABSTRACT FROM AUTHOR]

1. The responses of nutrient concentrations, plankton, macrophytes and macrozoobenthos to a reduction in external nutrient loading and to contemporary climatic change were studied in the shallow, moderately flushed Lake Müggelsee (Berlin, Germany). Weekly to biweekly data from 1979 to 2003 were compared with less frequently collected historical data. 2. A reduction of more than 50% in both total phosphorus (TP) and total nitrogen (TN) loading from the hypertrophic (1979–90) to the eutrophic period (1997–2003) was followed by an immediate decline in TN concentrations in the lake. TP concentrations only declined during winter and spring. During summer, phosphorus (P) release from the sediments was favoured by a drastic reduction in nitrate import. Therefore, Müggelsee acted as a net P source for 6 years after the external load reduction despite a mean water retention time of only 0.1–0.16 years. 3. Because of the likely limitation by P in spring and nitrogen (N) in summer, phytoplankton biovolume declined immediately after nutrient loading was reduced. The formerly dominant cyanobacteria (Oscillatoriales) Limnothrix redekei and Planktothrix agardhii disappeared, but the mean biovolume of the N2-fixing species Aphanizomenon flos- aquae remained constant. 4. The abundance of Daphnia spp. in summer decreased by half, while that of cyclopoid copepod species increased. Abundances of benthic macroinvertebrates (mainly chironomids) decreased by about 80%. A resource control of both phytoplankton and zooplankton is indicated by significant positive correlations between nutrient concentrations and phytoplankton biovolume and between phytoplankton and zooplankton biomass. 5. Water transparency in spring increased after nutrient reduction and resulted in re-colonisation of the lake by Potamogeton pectinatus. However, this process was severely hampered by periphyton shading and grazing by waterfowl and fish. 6. Water temperatures in Müggelsee have increased in winter, early spring and summer since 1979. The earlier development of the phytoplankton spring bloom was associated with shorter periods with ice cover, while direct temperature effects were responsible for the earlier development of the daphnid maximum in spring. [ABSTRACT FROM AUTHOR]

1. Measurements of total phosphorus (TP) concentrations since 1975 and a 50-year time series of phytoplankton biovolume and species composition from Lake Mondsee (Austria) were combined with palaeolimnological information on diatom composition and reconstructed TP-levels to describe the response of phytoplankton communities to changing nutrient conditions. 2. Four phases were identified in the long-term record. Phase I was the pre-eutrophication period characterised by TP-levels of about 6 μg L−1 and diatom dominance. Phase II began in 1966 with an increase in TP concentration followed by the invasion of Planktothrix rubescens in 1968, characterising mesotrophic conditions. Phase III, from 1976 to 1979, had the highest annual mean TP concentrations (up to 36 μg L−1) and phytoplankton biovolumes (3.57 mm3 L−1), although reductions in external nutrient loading started in 1974. Phases II and III saw an expansion of species characteristic of higher nutrient levels as reflected in the diatom stratigraphy. Oligotrophication (phase IV) began in 1980 when annual average TP concentration, Secchi depth and algal biovolume began to decline, accompanied by increasing concentrations of soluble reactive silica. 3. The period from 1981 to 1986 was characterised by asynchronous trends. Annual mean and maximum total phytoplankton biovolume initially continued to increase after TP concentration began to decline. Reductions in phytoplankton biovolume were delayed by about 5 years. Several phytoplankton species differed in the timing of their responses to changing nutrient conditions. For example, while P. rubescens declined concomitantly with the decline in TP concentration, other species indicative of higher phosphorus concentrations, such as Tabellaria flocculosa var. asterionelloides, tended to increase further. 4. These data therefore do not support the hypotheses that a reduction in TP concentration is accompanied by (i) an immediate decline in total phytoplankton biovolume and (ii) persistence of the species composition characterising the phytoplankton community before nutrient reduction. [ABSTRACT FROM AUTHOR]

1. This study deals with the distribution of euglenoid morphospecies along the length of the Lower Paraná River floodplain. Six sites located in the Paraná River, Estevez stream and Montiel shallow lake were surveyed monthly from May 1995 to April 1996.2. Eighty-eight infrageneric taxa were registered though the total density percentage of euglenoids seldom exceeded 15% of total phytoplankton. The increasing species richness towards the lake is mostly the result of a high contribution of species ofTrachelomonasand naked infrageneric taxa ofEuglena,LepocinclisandPhacus, while the distribution ofStrombomonasspecies along the transect is fairly constant.3. The richness of euglenoid morphospecies follows a pattern opposite to that found for the entire phytoplankton community. The distribution of euglenoids differs among the three habitats defined in this study: river, stream, shallow lake. These differences depend on the hydraulic condition of each habitat, as revealed by canonical correspondence analysis.4. The degree of association with each type of aquatic habitat varied among the species and differed between water phases.Strombomonas fluviatiliswas equally constant along the length of the ecotone, whileS. girardianaandS. scabrawere particularly associated with the Paraná River andP. longicauda,L. truncata,T. hispidaandT. similiswith the lake.5. The flood pulse establishes a clear pattern both in species richness and abundance of euglenoids. The number of species recorded during high water was more than twice that recorded during low water. [ABSTRACT FROM AUTHOR]

1. Lakes and ponds in the Larsemann Hills and Bølingen Islands (East-Antarctica) were characterised by cyanobacteria-dominated, benthic microbial mats. A 56-lake dataset representing the limnological diversity among the more than 150 lakes and ponds in the region was developed to identify and quantify the abiotic conditions associated with cyanobacterial and diatom communities. 2. Limnological diversity in the lakes of the Larsemann Hills and Bølingen Islands was associated primarily with conductivity and conductivity-related variables (concentrations of major ions and alkalinity), and variation in lake morphometry (depth, catchment and lake area). Low concentrations of pigments, phosphate, nitrogen, DOC and TOC in the water column of most lakes suggest extremely low water column productivity and hence high water clarity, and may thus contribute to the ecological success of benthic microbial mats in this region. 3. Benthic communities consisted of prostrate and sometimes finely laminated mats, flake mats, epilithic and interstitial microbial mats. Mat physiognomy and carotenoid/chlorophyll ratios were strongly related to lake depth, but not to conductivity. 4. Morphological-taxonomic analyses revealed the presence of 26 diatom morphospecies and 33 cyanobacterial morphotypes. Mats of shallow lakes (interstitial and flake mats) and those of deeper lakes (prostrate mats) were characterised by different dominant cyanobacterial morphotypes. No relationship was found between the distribution of these morphotypes and conductivity. In contrast, variation in diatom species composition was strongly related to both lake depth and conductivity. Shallow ponds were mainly characterised by aerial diatoms (e.g. Diadesmis cf. perpusilla and Hantzschia spp.). In deep lakes, communities were dominated by Psammothidium abundans and Stauroforma inermis. Lakes with conductivities higher than ±1.5 mS cm−1 became susceptible to freezing out of salts and hence pronounced conductivity fluctuations. In these lakes P. abundans and S. inermis were replaced by Amphora veneta. Stomatocysts were important only in shallow freshwater lakes. 5. Ice cover influenced microbial mat structure and composition both directly by physical disturbance in shallow lakes and by influencing light availability in deeper lakes, as well as indirectly by generating conductivity increases and promoting the development of seasonal anoxia. 6. The relationships between diatom species composition and conductivity, and diatom species composition and depth, were statistically significant. Transfer functions based on these data can therefore be used in paleolimnological reconstruction to infer changes in the precipitation–evaporation balance in continental Antarctic lakes. [ABSTRACT FROM AUTHOR]

1. Seasonality and spatial variation in abundance, biomass and activity of heterotrophic bacterioplankton was studied in a tropical freshwater lake. Variation in phytoplankton biomass and production, and several other limnological parameters, were also quantified. 2. Bacterial number and biomass fluctuated between 3.88– 8.33×106 ml-1 and 68–125 mg C m-3, respectively. No spatial variation was observed in these bacterial variables, although other limnological parameters showed vertical variation. 3. Seasonal and vertical variation of heterotrophic bacterial activity were estimated from oxygen consumption, 14CO2, dark uptake and plate counts of colony forming units. All three methods showed vertical heterogeneity, with higher activity in the hypotimnion during the long stratification period (February-May). Oxygen consumption rate and plate counts showed seasonality. 4. In spite of the low seasonality of climate in the tropics, several biological, chemical and physical variables were correlated with changes in bacterial variables. Wind and rainfall, and their effects on stratification and mixing, vertical distribution of nutrients and rate of primary production appeared to be the important parameters affecting heterotrophic bacterioplankton. [ABSTRACT FROM AUTHOR]

1. Heterotrophic bacterioplankton growth and production rates were estimated in a tropical lake by various methods. Mean growth rates, determined by tritiated thymidine incoporation into DNA, frequency of dividing cells and increase in cell density varied between 0.013 and 0.014 (with a range of 0.006–0.026) h-1 corresponding to bacterial production of 1.16–1.22 (0.34–3.63) mg C m-3 h-1. 2. Heterotrophic bacterial production estimated from oxygen and inorganic carbon consumption in the dark were compared with these values. The oxygen method gave similar results, while values from dark carbon uptake were as much as 2.5 times higher. 3. Although the different estimates of rates of bacterial production showed different patterns, the existence of spatial (vertical) and temporal (diel and seasonal) variation was demonstrated. Bacterial production was 13-41% of the net primary production and 10-30% of gross primary production. 4. Bacterial grazing mortality rate was estimated from size-fractionation and metablic inhibitor experiments. Average grazing rates were between 0.34 and 3.77 mg C m-3 h-1 corresponding to 76-120% of the mean bacterial production rate. Organisms 1–12 μm in size, possibly mainly ciliates, were implicated as important bacterial grazers. [ABSTRACT FROM AUTHOR]

1. It is argued that modern limnology is excessively concerned with the study of fresh waters in the northern temperate region. Limnology has been and is unbalanced in its interests and emphases and, as a result, many widely held limnological concepts need revision. 2. The genesis of the argument is outlined. It involved the initial assumption that Australia was limnologically distinctive. Later, it was realized that since most of the world is arid, semi-arid, tropical or semi-tropical, Australia was much less distinctive than originally thought. 3. Other limnological assumptions considered in the paper concern saline lakes and salinization, the importance and nature of temporary bodies of standing fresh water, biological diversity in tropical fresh waters, the evolutionary importance of permanent freshwater lakes, and the global applicability of the River Continuum Concept. Consideration suggests that some widely-held views on these matters are erroneous. 4. Thus, saline lakes are more important (scientifically, commercially), widespread and numerous environments than is generally thought. Salinization is a significant environmental hazard for many rivers in semi-arid regions. Temporary bodies of standing fresh water are geographically widespread and abundant aquatic environments with high species diversity, and in which many species have restricted distributions and low dispersal abilities. Biological diversity appears to be low in tropical fresh waters. Permanent freshwater lakes are perhaps less important loci for the evolution of the freshwater biota than generally thought, temporary fresh waters more so. Finally, the River Continuum does not seem to be applicable to many running waters outside the north temperate region. 5. A number of suggestions are made of how a better balance in limnology may be arrived at: how a more globally comprehensive intellectual framework may be built. Suggestions include: an increased awareness of the frequently different natures of waters within and beyond the northern temperate region; recognition of the potential benefits to be gained from the study of waters outside the northern temperate region; and, increased caution in the application of many current limnological concepts to waters outside the northern temperate region. 6. Finally, a number of constraints placed upon limnologists domiciled outside North America or Europe is discussed (the need to use English, current trends in funding for limnological research, inequalities in the distribution of knowledge). [ABSTRACT FROM AUTHOR]

Eutrophication of water bodies involves the enrichment of plant nutrients, often followed by significant shifts in the phytoplankton towards Cyanobacteria. When comparing different aquatic systems, even with similar nutrient contents and in the same climatic region, inverse deductions are not valid; i.e. (a) the presence of Cyanobacteria does not necessarily indicate eutrophic conditions, or (b) eutrophic or even polytrophic conditions do not necessarily support cyanobacterial development. 2. Above a threshold of 10 μg 1-1 total phosphorus, the development of Cyanobacteria can be described by physical factors, such as water column stability. By characterizing different forms of turbulence, the presence or absence of Cyanobacteria in lakes and rivers can be predicted. 3.When the turbulence of the water column is rather low, as it is in sheltered or meromictic lakes, Cyanobacteria can build up dense populations. In nutrient poor systems, species of Oscillatoria and (seldom) Aphanizomenon are dominating. 4. If the turbulence of the water column is high (mixing depth much greater than euphotic depth) or the mixing pattern is irregular, as in slowly flowing or regulated rivers, Cyanobacteria are outcompeted. 5. In the presence of frequent or permanent turbulence, but with mixing depths lower or not much greater than the euphotic zone (as it is the ease in shallow, unstratified lakes, mostly eutrophic or even hypertrophic), Cyanobacteria can outgrow normally dominant r-strategists under conditions of low N:P ratios, high water temperatures, pH >9.0 or low light availabilities. 6. If turbulence is comparatively great (10 to ≤15 m) and stable for a longer period of time, some cyanobacteria are able to adapt. 7. Our statements are discussed on the basis of physiological characteristics. [ABSTRACT FROM AUTHOR]