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Start Over Author "Nitin Kumar Singh" Journal genome announcements
7 results on '"Nitin Kumar Singh"'

1. Draft Genome Sequence of Solibacillus kalamii, Isolated from an Air Filter Aboard the International Space Station

Author

Arman Seuylemezian, Parag Vaishampayan, Kasthuri Venkateswaran, and Nitin Kumar Singh

Subjects
0301 basic medicine, Whole genome sequencing, 030106 microbiology, Solibacillus kalamii, Biology, C content, Genome, 03 medical and health sciences, 030104 developmental biology, International Space Station, Botany, Genetics, Prokaryotes, Molecular Biology, Air filter
Abstract

We report here the draft genome of Solibacillus kalamii ISSFR-015, isolated from a high-energy particulate arrestance filter aboard the International Space Station. The draft genome sequence of this strain contains 3,809,180 bp with an estimated G+C content of 38.61%.

Published
2017
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2. Draft Genome Sequences of Thermophiles Isolated from Yates Shaft, a Deep-Subsurface Environment

Author

Rajesh K. Sani, Kasthuri Venkateswaran, Courtney Carlson, and Nitin Kumar Singh

Subjects
0301 basic medicine, Genetics, 03 medical and health sciences, 030104 developmental biology, Microorganism, Thermophile, Prokaryotes, Biology, Molecular Biology, Genome
Abstract

The whole-genome sequences of seven thermophiles that could grow at >55°C, but not at 37°C, were generated. These thermophilic bacteria will play a useful role as model microorganisms, and analyzing their genomes will help to understand the observed production of novel bioactive compounds, including thermozymes and macromolecules.

Published
2017
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3. Draft Genome Sequences of Several Fungal Strains Selected for Exposure to Microgravity at the International Space Station

Author

Tamas Torok, Adriana Blachowicz, Kasthuri Venkateswaran, Clay C. C. Wang, Jillian Romsdahl, and Nitin Kumar Singh

Subjects
0301 basic medicine, Eukaryotes, business.industry, education, 030106 microbiology, Biology, Genome, Biotechnology, 03 medical and health sciences, 030104 developmental biology, International Space Station, Genetics, business, Baseline (configuration management), Molecular Biology
Abstract

The whole-genome sequences of eight fungal strains that were selected for exposure to microgravity at the International Space Station are presented here. These baseline sequences will help to understand the observed production of novel bioactive compounds.

Published
2017
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4. Draft Genome Sequences of Biosafety Level 2 Opportunistic Pathogens Isolated from the Environmental Surfaces of the International Space Station

Author

James B. Thissen, Aleksandra Checinska Sielaff, Kasthuri Venkateswaran, Nitin Kumar Singh, Jonathan E. Allen, and Crystal Jaing

Subjects
0301 basic medicine, business.industry, education, 030106 microbiology, Virulence, Computational biology, Biology, Pathogenicity, Genome, Biotechnology, 03 medical and health sciences, 030104 developmental biology, Biosafety level, International Space Station, Genetics, Prokaryotes, business, Molecular Biology
Abstract

The draft genome sequences of 20 biosafety level 2 (BSL-2) opportunistic pathogens isolated from the environmental surfaces of the International Space Station (ISS) were presented. These genomic sequences will help in understanding the influence of microgravity on the pathogenicity and virulence of these strains when compared with Earth strains.

Published
2016
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5. Draft Genome Sequences of Two Aspergillus fumigatus Strains, Isolated from the International Space Station

Author

Aleksandra Checinska, Kasthuri Venkateswaran, Adriana Blachowicz, Nitin Kumar Singh, and Clay C. C. Wang

Subjects
0301 basic medicine, Genetics, biology, Eukaryotes, health care facilities, manpower, and services, education, 030106 microbiology, Virulence, biology.organism_classification, Genome, Aspergillus fumigatus, 03 medical and health sciences, 030104 developmental biology, health services administration, International Space Station, human activities, Molecular Biology
Abstract

Draft genome sequences of Aspergillus fumigatus strains (ISSFT-021 and IF1SW-F4), opportunistic pathogens isolated from the International Space Station (ISS), were assembled to facilitate investigations of the nature of the virulence characteristics of the ISS strains to other clinical strains isolated on Earth.

Published
2016
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6. Draft Genome Sequence of Acinetobacter baumannii Strain MSP4-16

Author

Nitin Kumar Singh, Shanmugam Mayilraj, Shailesh Kumar, and Gajendra P. S. Raghava

Subjects
Protein coding, Whole genome sequencing, Strain (biology), Genetics, Prokaryotes, Biology, biology.organism_classification, Molecular Biology, Gene, C content, Microbiology, Acinetobacter baumannii
Abstract

We report the 4.0-Mb draft genome sequence of Acinetobacter baumannii strain MSP4-16, isolated from a mangrove soil sample from Parangipettai (11°30′N, 79°47′E), Tamil Nadu, India. The draft genome sequence of strain MSP4-16 consists of 3,944,542 bp, with a G+C content of 39%, 5,387 protein coding genes, and 69 RNAs.

Published
2013
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7. Draft Genome Sequence of Streptomyces gancidicus Strain BKS 13-15

Author

Nitin Kumar Singh, Shanmugam Mayilraj, Navjot Kaur, Shailesh Kumar, and Gajendra P. S. Raghava

Subjects
Genetics, Whole genome sequencing, Strain (biology), Prokaryotes, Mangrove, Biology, Molecular Biology, Genome, C content, Gene, Streptomyces gancidicus
Abstract

We report the 7.3-Mbp genome sequence of Streptomyces gancidicus strain BKS 13-15, isolated from mangrove sediment samples collected from the Bhitar Kanika Mangrove Reserve Forest, Odissha, India. The draft genome of strain Streptomyces gancidicus strain BKS 13-15 consists of 7,300,479 bp with 72.6% G+C content, 6,631 protein-coding genes, and 71 RNAs.

Published
2013

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