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The Songliao Basin in NE China is a large rift basin filled with Cretaceous terrestrial sediments. Lacustrine mudstones of the Nenjiang Formation form an important source rock in the Cretaceous Songliao Basin. These shales are commonly thought to have been deposited in deep, quiet, and anoxic environments. Samples obtained from the core of the SK‐2 scientific borehole provide critical insights to understand the hydrodynamic and hydroclimatic environments, which are, however, different from the traditional views regarding the deposition of these rocks. By following a mudstone description guide, five different mudstone lithofacies (LF) transported and deposited by muddy hyperpycnal flows and muddy debris flows were recognized. They are laminated fine mudstone (LF1), laminated medium mudstone (LF2), and laminated coarse mudstone (LF3) showing pairs of inverse grading (Ha) and normal grading (Hb) under the microscope, graded coarse mudstone (LF4) and massive coarse mudstone (LF5). We found that mudstones of the First Member of the Nenjiang Formation are dominated by siliciclastic detritus and argillaceous components and show frequent variations in grain size. Because large‐scale sub‐lacustrine channels travelling long distance (>80 km) were widely distributed in the Songliao palaeolake during the deposition of the Nenjiang Formation, fluctuations in mudstone grain size might have been caused by velocity fluctuations in flows. Sedimentary structures and textures preserved in mudstones of the First Member of the Nenjiang Formation indicate that the majority of these lithofacies were accumulated by muddy hyperpycnal flows and muddy debris flows. Therefore, a depositional model dominantly influenced by muddy hyperpycnal flows and debris flows is proposed. This work not only provides a new view for the depositional process of mudstones of the Songliao Basin, NE China, but also give insights to understand lacustrine palaeoenvironment and terrestrial palaeoclimate. [ABSTRACT FROM AUTHOR]