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The response of terrestrial ecosystems to increased atmospheric CO 2 concentrations is controversial and not yet fully understood, with previous large-scale forest manipulation experiments exhibiting contrasting responses. Although there is consensus that increased CO 2 has a relevant effect on instantaneous processes such as photosynthesis and transpiration, there are large uncertainties regarding the fate of extra assimilated carbon in ecosystems. Filling this research gap is challenging because tracing the movement of new carbon across ecosystem compartments involves the study of multiple processes occurring over a wide range of timescales, from hours to millennia. We posit that a comprehensive quantification of the effect of increased CO 2 must answer two interconnected questions: How much and for how long is newly assimilated carbon stored in ecosystems? Therefore, we propose that the transit time distribution of carbon is the key concept needed to effectively address these questions. Here, we show how the transit time distribution of carbon can be used to assess the fate of newly assimilated carbon and the timescales at which it is cycled in ecosystems. We use as an example a transit time distribution obtained from a tropical forest and show that most of the 60% of fixed carbon is respired in less than 1 year; therefore, we infer that under increased CO 2 , most of the new carbon would follow a similar fate unless increased CO 2 would cause changes in the rates at which carbon is cycled and transferred among ecosystem compartments. We call for a more frequent adoption of the transit time concept in studies seeking to quantify the ecosystem response to increased CO 2 ., (© 2023 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)

The use of stable isotopes to characterize ecosystem dynamics and infer leaf gas exchange processes has become increasingly prevalent over the last few decades within the ecological community. While advancements in theory and our understanding of the physiological processes controlling isotopic signatures in plants has been well-documented, no standardized tool currently exists to facilitate the computation of common isotope-derived plant physiological indices. Here, we present isocalcR, an R package intended to facilitate the use of stable isotope data from plant tissues by providing an integrated collection of functions and recommended reference data. The isocalcR R package contains a suite of functions that compute leaf carbon isotope discrimination (∆ 13 C), leaf intercellular [CO 2 ], the ratio of leaf intercellular to atmospheric [CO 2 ], the difference between atmospheric and leaf intercellular [CO 2 ], and intrinsic water use efficiency from carbon isotope signatures in leaf or wood tissue with minimal inputs from the user. isocalcR also implements and provides recommended input atmospheric [CO 2 ] (ppm) and atmospheric δ 13 CO 2 (‰) data for the period 0-2021 C.E. A major goal of isocalcR is to provide a standardized, open-source tool to streamline the calculation of reproducible physiological indices from stable isotope signatures in plant tissues, incorporating the most up-to-date theory, while simultaneously eliminating potential errors associated with complex calculations. isocalcR can be used for any location globally as long as the user provides information regarding temperature and elevation to the main workhorse functions., (© 2022 John Wiley & Sons Ltd.)

Foliar stable nitrogen (N) isotopes (δ 15 N) generally reflect N availability to plants and have been used to infer about changes thereof. However, previous studies of temporal trends in foliar δ 15 N have ignored the influence of confounding factors, leading to uncertainties on its indication to N availability. In this study, we measured foliar δ 15 N of 1811 herbarium specimens from 12 plant species collected in southern China forests from 1920 to 2010. We explored how changes in atmospheric CO 2 , N deposition and global warming have affected foliar δ 15 N and N concentrations ([N]) and identified whether N availability decreased in southern China. Across all species, foliar δ 15 N significantly decreased by 0.82‰ over the study period. However, foliar [N] did not decrease significantly, implying N homeostasis in forest trees in the region. The spatiotemporal patterns of foliar δ 15 N were explained by mean annual temperature (MAT), atmospheric CO 2 ( P CO 2 ), atmospheric N deposition, and foliar [N]. The spatiotemporal trends of foliar [N] were explained by MAT, temperature seasonality, P CO 2 , and N deposition. N deposition within the rates from 5.3 to 12.6 kg N ha -1  year -1 substantially contributed to the temporal decline in foliar δ 15 N. The decline in foliar δ 15 N was not accompanied by changes in foliar [N] and therefore does not necessarily reflect a decline in N availability. This is important to understand changes in N availability, which is essential to validate and parameterize biogeochemical cycles of N., (© 2022 John Wiley & Sons Ltd.)

The marine biological carbon pump (BCP) stores carbon in the ocean interior, isolating it from exchange with the atmosphere and thereby coregulating atmospheric carbon dioxide (CO 2 ). As the BCP commonly is equated with the flux of organic material to the ocean interior, termed "export flux," a change in export flux is perceived to directly impact atmospheric CO 2 , and thus climate. Here, we recap how this perception contrasts with current understanding of the BCP, emphasizing the lack of a direct relationship between global export flux and atmospheric CO 2 . We argue for the use of the storage of carbon of biological origin in the ocean interior as a diagnostic that directly relates to atmospheric CO 2 , as a way forward to quantify the changes in the BCP in a changing climate. The diagnostic is conveniently applicable to both climate model data and increasingly available observational data. It can explain a seemingly paradoxical response under anthropogenic climate change: Despite a decrease in export flux, the BCP intensifies due to a longer reemergence time of biogenically stored carbon back to the ocean surface and thereby provides a negative feedback to increasing atmospheric CO 2 . This feedback is notably small compared with anthropogenic CO 2 emissions and other carbon-climate feedbacks. In this Opinion paper, we advocate for a comprehensive view of the BCP's impact on atmospheric CO 2 , providing a prerequisite for assessing the effectiveness of marine CO 2 removal approaches that target marine biology., (© 2024 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)

This document is a response to concerns raised by Reershemius and Suhrhoff regarding a study conducted by Kantola et al. The authors of the response acknowledge that Reershemius and Suhrhoff did not find any faults with the derivation in the paper, which they state are factually true. They also mention that Reershemius and Suhrhoff arrived at a similar result in their own unpublished work. The response addresses specific implementation details raised by Reershemius and Suhrhoff and argues that these concerns lack merit. The authors appreciate the constructive engagement and transparency of data. [Extracted from the article]

Gross primary production (GPP) by terrestrial ecosystems is a key quantity in the global carbon cycle. The instantaneous controls of leaf-level photosynthesis are well established, but there is still no consensus on the mechanisms by which canopy-level GPP depends on spatial and temporal variation in the environment. The standard model of photosynthesis provides a robust mechanistic representation for C3 species; however, additional assumptions are required to “scale up” from leaf to canopy. As a consequence, competing models make inconsistent predictions about how GPP will respond to continuing environmental change. This problem is addressed here by means of an empirical analysis of the light use efficiency (LUE) of GPP inferred from eddy covariance carbon dioxide flux measurements, in situ measurements of photosynthetically active radiation (PAR), and remotely sensed estimates of the fraction of PAR (fAPAR) absorbed by the vegetation canopy. Focusing on LUE allows potential drivers of GPP to be separated from its overriding dependence on light. GPP data from over 100 sites, collated over 20 years and located in a range of biomes and climate zones, were extracted from the FLUXNET2015 database and combined with remotely sensed fAPAR data to estimate daily LUE. Daytime air temperature, vapor pressure deficit, diffuse fraction of solar radiation, and soil moisture were shown to be salient predictors of LUE in a generalized linear mixed-effects model. The same model design was fitted to site-based LUE estimates generated by 16 terrestrial ecosystem models. The published models showed wide variation in the shape, the strength, and even the sign of the environmental effects on modeled LUE. These findings highlight important model deficiencies and suggest a need to progress beyond simple “goodness of fit” comparisons of inferred and predicted carbon fluxes toward an approach focused on the functional responses of the underlying dependencies. [ABSTRACT FROM AUTHOR]

Land carbon sink is a vital component for the achievement of China's ambitious carbon neutrality goal, but its magnitude is poorly known. Atmospheric observations and inverse models are valuable tools to constrain the China's land carbon sink. Space‐based CO2 measurements from satellites form an emerging data stream for application of such atmospheric inversions. Here, we reviewed the satellite missions that is dedicated to the monitoring of CO2, and the recent progresses on the inversion of China's land carbon sink using satellite CO2 measurements. We summarized the limitations and challenges in current space platforms, retrieval algorithms, and the inverse modeling. It is shown that there are large uncertainties of contemporary satellite‐based estimates of China's land carbon sink. We discussed future opportunities of continuous improvements in three aspects to better constrain China's land carbon sink with space‐based CO2 measurements. [ABSTRACT FROM AUTHOR]

Peatlands drained for agriculture or forestry are susceptible to the rapid release of greenhouse gases (GHGs) through enhanced microbial decomposition and increased frequency of deep peat fires. We present evidence that rewetting drained subtropical wooded peatlands (STWPs) along the southeastern USA coast, primarily pocosin bogs, could prevent significant carbon (C) losses. To quantify GHG emissions and storage from drained and rewetted pocosin we used eddy covariance techniques, the first such estimates that have been applied to this major bog type, on a private drained (PD) site supplemented by static chamber measurements at PD and Pocosin Lakes National Wildlife Refuge. Net ecosystem exchange measurements showed that the loss was 21.2 Mg CO2 ha−1 year−1 (1 Mg = 106 g) in the drained pocosin. Under a rewetted scenario, where the annual mean water table depth (WTD) decreased from 60 to 30 cm, the C loss was projected to fall to 2 Mg CO2 ha−1 year−1, a 94% reduction. If the WTD was 20 cm, the peatlands became a net carbon sink (−3.3 Mg CO2 ha−1 year−1). Hence, net C reductions could reach 24.5 Mg CO2 ha−1 year−1, and when scaled up to the 4000 ha PD site nearly 100,000 Mg CO2 year−1 of creditable C could be amassed. We conservatively estimate among the 0.75 million ha of southeastern STWPs, between 450 and 770 km2 could be rewet, reducing annual GHG emissions by 0.96–1.6 Tg (1 Tg = 1012 g) of CO2, through suppressed microbial decomposition and 1.7–2.8 Tg via fire prevention, respectively. Despite covering <0.01% of US land area, rewetting drained pocosin can potentially provide 2.4% of the annual CO2 nationwide reduction target of 0.18 Pg (1 Pg = 1015 g). Suggesting pocosin restoration can contribute disproportionately to the US goal of achieving net‐zero emission by 2050. [ABSTRACT FROM AUTHOR]

The degree to which elevated CO2 concentrations (e[CO2]) increase the amount of carbon (C) assimilated by vegetation plays a key role in climate change. However, due to the short‐term nature of CO2 enrichment experiments and the lack of reconciliation between different ecological scales, the effect of e[CO2] on plant biomass stocks remains a major uncertainty in future climate projections. Here, we review the effect of e[CO2] on plant biomass across multiple levels of ecological organization, scaling from physiological responses to changes in population‐, community‐, ecosystem‐, and global‐scale dynamics. We find that evidence for a sustained biomass response to e[CO2] varies across ecological scales, leading to diverging conclusions about the responses of individuals, populations, communities, and ecosystems. While the distinct focus of every scale reveals new mechanisms driving biomass accumulation under e[CO2], none of them provides a full picture of all relevant processes. For example, while physiological evidence suggests a possible long‐term basis for increased biomass accumulation under e[CO2] through sustained photosynthetic stimulation, population‐scale evidence indicates that a possible e[CO2]‐induced increase in mortality rates might potentially outweigh the effect of increases in plant growth rates on biomass levels. Evidence at the global scale may indicate that e[CO2] has contributed to increased biomass cover over recent decades, but due to the difficulty to disentangle the effect of e[CO2] from a variety of climatic and land‐use‐related drivers of plant biomass stocks, it remains unclear whether nutrient limitations or other ecological mechanisms operating at finer scales will dampen the e[CO2] effect over time. By exploring these discrepancies, we identify key research gaps in our understanding of the effect of e[CO2] on plant biomass and highlight the need to integrate knowledge across scales of ecological organization so that large‐scale modeling can represent the finer‐scale mechanisms needed to constrain our understanding of future terrestrial C storage. [ABSTRACT FROM AUTHOR]

One of the major uncertainties for projecting permafrost carbon (C)‐climate feedback is a poor representation of the non‐growing season carbon dioxide (CO2) emissions under a changing climate. Here, combining in situ field observations, regional synthesis and a random forest model, we assessed contemporary and future soil respired CO2 (i.e., soil respiration, Rs) across the Tibetan alpine permafrost region, which has received much less attention compared with the Arctic permafrost domain. We estimated the regional mean Rs of 229.8, 72.9 and 302.7 g C m−2 year−1 during growing season, non‐growing season and the entire year, respectively; corresponding to the contemporary losses of 296.9, 94.3 and 391.2 Tg C year−1 from this high‐altitude permafrost‐affected area. The non‐growing season Rs accounted for a quarter of the annual soil CO2 efflux. Different from the prevailing view that temperature is the most limiting factor for cold‐period CO2 release in Arctic permafrost ecosystems, precipitation determined the spatial pattern of non‐growing season Rs on the Tibetan Plateau. Using the key predictors, model extrapolation demonstrated additional losses of 38.8 and 74.5 Tg C from the non‐growing season for a moderate mitigation scenario and a business‐as‐usual emissions scenario, respectively. These results provide a baseline for non‐growing season CO2 emissions from high‐altitude permafrost areas and help for accurate projection of permafrost C‐climate feedback. [ABSTRACT FROM AUTHOR]

Reconstructions of past climate impact, that is, radiative forcing (RF), of peatland carbon (C) dynamics show that immediately after peatland initiation the climate warming effect of CH4 emissions exceeds the cooling effect of CO2 uptake, but thereafter the net effect of most peatlands will move toward cooling, when RF switches from positive to negative. Reconstructing peatland C dynamics necessarily involves uncertainties related to basic assumptions on past CO2 flux, CH4 emission and peatland expansion. We investigated the effect of these uncertainties on the RF of three peatlands, using either apparent C accumulation rates, net C balance (NCB) or NCB plus C loss during fires as basis for CO2 uptake estimate; applying a plausible range for CH4 emission; and assuming linearly interpolated expansion between basal dates or comparatively early or late expansion. When we factored that some C would only be stored temporarily (NCB and NCB+fire), the estimated past cooling effect of CO2 uptake increased, but the present‐day RF was affected little. Altering the assumptions behind the reconstructed CO2 flux or expansion patterns caused the RF to peak earlier and advanced the switch from positive to negative RF by several thousand years. Compared with NCB, including fires had only small additional effect on RF lasting less than 1000 year. The largest uncertainty in reconstructing peatland RF was associated with CH4 emissions. As shown by the consistently positive RF modelled for one site, and in some cases for the other two, peatlands with high CH4 emissions and low C accumulation rates may have remained climate warming agents since their initiation. Although uncertainties in present‐day RF were mainly due to the assumed CH4 emission rates, the uncertainty in lateral expansion still had a significant effect on the present‐day RF, highlighting the importance to consider uncertainties in the past peatland C balance in RF reconstructions. [ABSTRACT FROM AUTHOR]

High‐quality atmospheric CO2 measurements are sparse in Amazonia, but can provide critical insights into the spatial and temporal variability of sources and sinks of CO2. In this study, we present the first 6 years (2014–2019) of continuous, high‐precision measurements of atmospheric CO2 at the Amazon Tall Tower Observatory (ATTO, 2.1°S, 58.9°W). After subtracting the simulated background concentrations from our observational record, we define a CO2 regional signal (ΔCO2obs) that has a marked seasonal cycle with an amplitude of about 4 ppm. At both seasonal and inter‐annual scales, we find differences in phase between ΔCO2obs and the local eddy covariance net ecosystem exchange (EC‐NEE), which is interpreted as an indicator of a decoupling between local and non‐local drivers of ΔCO2obs. In addition, we present how the 2015–2016 El Niño‐induced drought was captured by our atmospheric record as a positive 2σ anomaly in both the wet and dry season of 2016. Furthermore, we analyzed the observed seasonal cycle and inter‐annual variability of ΔCO2obs together with net ecosystem exchange (NEE) using a suite of modeled flux products representing biospheric and aquatic CO2 exchange. We use both non‐optimized and optimized (i.e., resulting from atmospheric inverse modeling) NEE fluxes as input in an atmospheric transport model (STILT). The observed shape and amplitude of the seasonal cycle was captured neither by the simulations using the optimized fluxes nor by those using the diagnostic Vegetation and Photosynthesis Respiration Model (VPRM). We show that including the contribution of CO2 from river evasion improves the simulated shape (not the magnitude) of the seasonal cycle when using a data‐driven non‐optimized NEE product (FLUXCOM). The simulated contribution from river evasion was found to be 25% of the seasonal cycle amplitude. Our study demonstrates the importance of the ATTO record to better understand the Amazon carbon cycle at various spatial and temporal scales. [ABSTRACT FROM AUTHOR]

Agricultural peatlands are estimated to emit approximately one third of global greenhouse gas (GHG) emissions from croplands, but the temporal dynamics and controls of these emissions are poorly understood, particularly for nitrous oxide (N2O). We used cavity ring‐down spectroscopy and automated chambers in a drained agricultural peatland to measure over 70,000 individual N2O, methane (CH4), and carbon dioxide (CO2) fluxes over 3 years. Our results showed that N2O fluxes were high, contributing 26% (annual range: 16%–35%) of annual CO2e emissions. Total N2O fluxes averaged 26 ± 0.5 kg N2O‐N ha−1 y−1 and exhibited significant inter‐ and intra‐annual variability with a maximum annual flux of 42 ± 1.8 kg N2O‐N ha−1 y−1. Hot moments of N2O and CH4 emissions represented 1.1 ± 0.2 and 1.3 ± 0.2% of measurements, respectively, but contributed to 45 ± 1% of mean annual N2O fluxes and to 140 ± 9% of mean annual CH4 fluxes. Soil moisture, soil temperature, and bulk soil oxygen (O2) concentrations were strongly correlated with soil N2O and CH4 emissions; soil nitrate (NO3‐) concentrations were also significantly correlated with soil N2O emissions. These results suggest that IPCC benchmarks underestimate N2O emissions from these high emitting agricultural peatlands by up to 70%. Scaling to regional agricultural peatlands with similar management suggests these ecosystems could emit up to 1.86 Tg CO2e y−1 (range: 1.58–2.21 Tg CO2e y−1). Data suggest that these agricultural peatlands are large sources of GHGs, and that short‐term hot moments of N2O and CH4 are a significant fraction of total greenhouse budgets. [ABSTRACT FROM AUTHOR]

Inland waters play an active role in the global carbon cycle and emit large volumes of the greenhouse gases (GHGs), methane (CH4) and carbon dioxide (CO2). A considerable body of research has improved emissions estimates from lakes, reservoirs and rivers but recent attention has been drawn to the importance of small, artificial waterbodies as poorly quantified but potentially important emission hotspots. Of particular interest are emissions from drainage ditches and constructed ponds. These waterbody types are prevalent in many landscapes and their cumulative surface areas can be substantial. Furthermore, GHG emissions from constructed waterbodies are anthropogenic in origin and form part of national emissions reporting, whereas emissions from natural waterbodies do not (according to Intergovernmental Panel on Climate Change guidelines). Here, we present GHG data from two complementary studies covering a range of land uses. In the first, we measured emissions from nine ponds and seven ditches over a full year. Annual emissions varied considerably: 0.1–44.3 g CH4 m−2 year−1 and −36–4421 g CO2 m−2 year−1. In the second, we measured GHG concentrations in 96 ponds and 64 ditches across seven countries, covering subtropical, temperate and sub‐arctic biomes. When CH4 emissions were converted to CO2 equivalents, 93% of waterbodies were GHG sources. In both studies, GHGs were positively related to nutrient status (C, N, P), and pond GHG concentrations were highest in smallest waterbodies. Ditch and pond emissions were larger per unit area when compared to equivalent natural systems (streams, natural ponds). We show that GHG emissions from natural systems should not be used as proxies for those from artificial waterbodies, and that artificial waterbodies have the potential to make a substantial but largely unquantified contribution to emissions from the Agriculture, Forestry and Other Land Use sector, and the global carbon cycle. [ABSTRACT FROM AUTHOR]

The 2015−2016 El Niño was one of the strongest on record, but its influence on the carbon balance is less clear. Using Northern Hemisphere atmospheric CO2 observations, we found both detrended atmospheric CO2 growth rate (CGR) and CO2 seasonal‐cycle amplitude (SCA) of 2015−2016 were much higher than that of other El Niño events. The simultaneous high CGR and SCA were unusual, because our analysis of long‐term CO2 observations at Mauna Loa revealed a significantly negative correlation between CGR and SCA. Atmospheric inversions and terrestrial ecosystem models indicate strong northern land carbon uptake during spring but substantially reduced carbon uptake (or high emissions) during early autumn, which amplified SCA but also resulted in a small anomaly in annual carbon uptake of northern ecosystems in 2015−2016. This negative ecosystem carbon uptake anomaly in early autumn was primarily due to soil water deficits and more litter decomposition caused by enhanced spring productivity. Our study demonstrates a decoupling between seasonality and annual carbon cycle balance in northern ecosystems over 2015−2016, which is unprecedented in the past five decades of El Niño events. [ABSTRACT FROM AUTHOR]