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The hyporheic zone (HZ) of streams harbors co-occurring epigean taxa and stygobionts (including HZ specialist taxa and deeper groundwater taxa) that face the same set of local environmental factors, but are derived from spatially and functionally discrete colonist pools. We investigate whether occurrences of epigean taxa and stygobionts are differentially influenced by the same set of environmental variables in HZ samples from Texas, USA. We increase the number of records for described stygobionts in the state by nearly 12%, but 26 stygobionts (35%) were undescribed species. Stygobionts had smaller average ranges (3549 km2) than epigean taxa (24,046 km2), but occurred in similar abundances. Dissolved oxygen and temperature influenced community composition in both groups, but stygobiont community composition, richness, and abundance were influenced by association with karst aquifers and surface water-groundwater exchange, whereas epigean taxa composition was only weakly influenced by the association with karst aquifers. Contrasts between epigean taxa and stygobiont occurrence patterns are primarily explained by differences in range size, dispersal ability, and the pool of potential colonizer species. This first documentation of Texas HZ communities includes 14 stygobionts previously recorded only from karst aquifers: their discovery in the HZ has important management implications.

The hyporheic zone plays a key role in stream ecosystem function, but the quantity of biomass produced in this unique and rarely sampled habitat remains underappreciated. We measured hyporheic secondary production and life history characteristics of a stonefly, Leuctra tenuis (Pictet, 1841), in two Ozark streams with extensive gravel beds: a mainstem perennial stream and a tributary with ephemeral surface flow. L. tenuis nymphs were collected 30–45 cm below the streambed surface in both locations monthly for a year (2017–2018). Annual hyporheic secondary production of L. tenuis was 15.23 mg m−2 of streambed (95% CI 12.00–20.41) in the mainstem and 2.61 mg m−2 (95% CI 0.95–4.83) in the tributary. Annual benthic production of L. tenuis collected concurrently from the mainstem was 12.06 mg m−2 (95% CI 6.77–17.73). L. tenuis was univoltine and completed nymphal development in 8 months and approximately 3900 degree days (starting 20 January). This study is the first to measure hyporheic secondary production in the Ozarks, where many streams have deep hyporheic zones that could contribute substantial biomass to stream and riparian food webs. Our results, based on just one species of a diverse hyporheos, indicate the need for more ecological research in this habitat.

Benthic macroinvertebrates inhabit the streambed sediments of temporary streams during drying events. Fine sediment (< 2 mm in diameter) deposition and clogging of interstitial pathways reduces the connectivity between benthic and subsurface habitats, potentially inhibiting macroinvertebrate vertical movements. Direct observations within subsurface sediments are, however, inherently difficult. As a result, confirmation of macroinvertebrate vertical movement, and the effect of fine sediment, is limited. We used laboratory mesocosms containing transparent gravel sized particles (10–15 mm) to facilitate the direct observation and tracking of vertical movements by Gammarus pulex in response to water level reduction and sedimentation. Seven sediment treatments comprised two fine sediment fractions (small: 0.125–0.5 mm, coarse sand: 0.5–1 mm) deposited onto the surface of the substrate, and a control treatment where no fine sediment was applied. We found that G. pulex moved into the subsurface gravel sediments in response to drying, but their ability to remain submerged during water level reduction was impeded by fine sediment deposition. In particular deposition of the coarser sand fraction clogged the sediment surface, limiting vertical movements. Our results highlight the potential effect of sedimentation on G. pulex resistance to drying events in streams.

Sampling of the hyporheic zone along a polluted stretch of the Aries River (Romania) showed contrasting biodiversity and abundance patterns at different time scales. The species considered in this study were Crustacea and Oligochaeta and only the more frequently occurring species were included in the analyses. Monthly composition of these species showed a little correlation with physical and chemical parameters. In contrast, when subsets of the monthly samples of the two most abundant species, Microcharon sp. and Diacyclops languidoides, were analyzed, there were strong correlations with at least some of the major physical and chemical parameters (temperature, flow rate, Al, and Fe) in each of the three possible seasonal series. However, correlations between seasonal series were sometimes contradictory and appeared to be artifacts related to sparse data. It is suggested that monthly or more frequent sampling is required for the complete assessment of biodiversity and processes in the hyporheic zone and to study the relationship between the hyporheos and the surface river ecosystem.

Crayfish in many headwater streams regularly cope with seasonal drought. However, it is unclear how landscape changes affect the long-term persistence of crayfish populations. We designed two laboratory experiments to investigate the acute effects of common landscape stressors on crayfish: water withdrawal and sedimentation. The first experiment tested the interaction among water withdrawals (four 24-h water reductions of 0, 15, 30, or 45 cm) and two substrate treatments (pebble and cobble) on the burrowing depth of crayfish. The second experiment evaluated the effects of excess fine sediment (three treatments of 0, 45, and 90% sediment) and substrate type (cobble and pebble) on crayfish burrowing depth. Crayfish were able to burrow deeper into the simulated hyporheic zone in cobble substrate when compared to pebble. Crayfish subjected to greater water withdrawals in the pebble treatment were not able to reach the simulated hyporheic zone. Excess fine sediment reduced the depth that crayfish burrowed, regardless of substrate type. Results from this study suggest excess fine sediment may reduce crayfish persistence, particularly when seeking refuge during prolonged dry conditions.

International audience; The breakdown rate of leaf litter buried inside river sediments (i.e., in the hyporheic zone) remains poorly known. The burial of large bags (15 9 15 cm) used in the benthic layer generates disturbances of the vertical connectivity with surface water, and thus affects the breakdown rate. We performed field and laboratory experiments to test the suitability of two leaf litter containers: small litter bags (5 9 4 cm) and perforated stainless steel cylin- ders (6 cm long, 1.6 cm in diameter), both introduced inside sediments using mobile mini-piezometers (1 m long, 1.7 cm or 3 cm in diameter). We compared the two containers for (i) the hydrological exchanges toward leaf litter, (ii) the impact of a benthic shredder on leaf breakdown, and (iii) the response of leaf litter breakdown to changes in sediment characteristics. The two methods give similar patterns of breakdown rates with stream sediment characteristics, but the use of perforated stainless steel cylinders provides an artifi- cial empty volume in which invertebrates can over degrade leaf litter. Small plastic bags do not alter physico-chemical conditions around leaf litter and give lower values of breakdown rates in the hyporheic zone.

We investigated the effect of in-stream gravel extraction in a pre-alpine gravel-bed river on hyporheic invertebrate community, together with changes in the hyporheic geomorphology, physico-chemistry and biofilm activity. Hyporheic invertebrates were collected, together with environmental data, on seven sampling occasions from June 2004 to May 2005, at two river reaches—at the site of in-stream gravel extraction and at a site 2.5 km upstream. The hyporheic samples were taken from the river bed and from the gravel bars extending laterally from the stream channel. The invertebrate community was dominated by insect larvae (occasional hyporheos), followed by meiofauna (permanent hyporheos). Stygobionts were present at low species richness and in low densities. Gravel extraction from the stream channel led to changes in the patterns of water exchange between surface and subsurface and changes in the sediment composition at the site. Immediate reductions in density and taxonomic richness of invertebrates were observed, together with changes in their community composition. The hyporheic invertebrate community in the river recovered relatively fast (in 2.5 months) by means of density and taxonomic richness, while by means of community composition invertebrates needed 5–7 months to recover. The impact of fine sediments (

The hyporheic zone of stream ecosystems is a critical habitat for microbial communities. However, the factors influencing hyporheic bacterial communities along spatial and seasonal gradients remain poorly understood. We sought to characterize patterns in bacterial community composition among the sediments of a small stream in southern Ontario, Canada. We used sampling cores to collect monthly hyporheic water and sediment microbial communities in 2006 and 2007. We described bacterial communities terminal-restriction fragment length polymorphism (TRFLP) and tested for spatial and seasonal relationships with physicochemical parameters using multivariate statistics. Overall, the hyporheic zone appears to be a DOC, oxygen, and nitrogen sink. Microbial communities were distinct from those at the streambed surface and from soil collected in the adjacent watershed. In the sediments, microbial communities were distinct between the fall, spring, and summer seasons, and bacterial communities were more diverse at streambed surface and near-surface sites compared with deeper sites. Moreover, bacterial communities were similar between consecutive fall seasons despite shifting throughout the year, suggesting recurring community assemblages associated with season and location in the hyporheic zone. Using canonical correspondence analysis, seasonal patterns in microbial community composition and environmental parameters were correlated in the following way: temperature was related to summer communities; DOC (likely from biofilm and allochthonous inputs) influenced most fall communities; and nitrogen associated strongly with winter and spring communities. Our results also suggest that labile DOC entering the hyporheic zone occurred in concert with shifts in the bacterial community. Generally, seasonal patterns in hyporheic physicochemistry and microbial biodiversity remain largely unexplored. Therefore, we highlight the importance of seasonal and spatial resolution when assessing surface- and groundwater interactions in stream ecosystems. © Springer Science+Business Media B.V. 2009.

Respiratory electron transport system (ETS) activity and oxygen consumption in the interstitial water, and in the fine (i.e. silt) and coarse (sand) sediment fractions from the hyporheic zone of the prealpine river Baca (W Slovenia) have been measured in order to estimate the intensity of potential and actual carbon mineralization through microbial communities. Hyporheic samples from the river bed (RB) and gravel bars (GB) were compared. ETS activity and oxygen consumption of all fractions from the RB did not differ significantly from those from the GB. ETS activity and oxygen consumption of biofilm attached to 1 g of the silt were higher than of that attached to the same mass of the sand. A significant correlation between ETS activity and oxygen consumption indicated that the former should be a good indicator of intensity of bioactivity in hyporheic sediments. The ratio of ETS activity to oxygen consumption (ETS/R ratio) revealed that the oxygen consumption of microorganisms is responsible for approximately 60% of the metabolic potential in the hyporheic sediments. The contributions of different fractions of sediment to the total ETS activity differed between RB and GB. The contribution of microorganisms in the interstitial water and silt was higher in GB than in the RB, but the sand fraction contributed less to potential carbon loss in GB than in the RB. Average total respiratory carbon loss per volume through the hyporheic zone was higher in the RB than in GB. The main reasons suggested are the different intensity of exchange of surface water with the hyporheic zone, and the rate of consolidation of sediments, which is primarily a function of river hydrology and geomorphology.

The hyporheic zone and its interactions with coarse surface sediments is increasingly reported by aquatic ecologists because the water exchanges between surface and subsurface are important factors for the understanding of the ecosystem functioning. However, the hyproheic oligochaete assemblages have received less attention than other assemblages such as crustaceans. In addition, studies investigating the incidence of pollution in watercourses have mostly focused on the benthic zone and have neglected the hyporheic zone. Some examples are given from an unpolluted glacial river (Roseg), polluted plains rivers (Moselle, Rhône) and a protected wetland in an urbanized environment. The hyporheic zone kept the memory of past and present incidences of pollution, in particular when downwellings of polluted surface waters to the hyporheic zone predominated. The Active hydrologic Exchange Describers between surface and subsurface (AED oligochaete species) were the same in the glacial river Roseg, the rivers Rhône and Moselle and the urbanized wetland. The predominance of pollution-tolerant species like Limnodrilus hoffmeisteri was observed in polluted groundwater as well as in polluted surface coarse sediments. Moreover, the urbanized wetland exhibited a high species richness, suggesting that the hyporheic zone is a reservoir of species. The oligochaete communities enable biologists to simultaneously assess the pollution incidence, the permeability of coarse habitats, the water exchanges between surface and subsurface, and give an approximate measure of the metabolic activities in the sediments. Consequently, the simultaneous study of surface and hyporheic oligochaete assemblages is of great interest when considering the ecological functioning of watercourses and the incidence of pollution inputs.

Previous studies on recovery in hyporheic communities have found that communities rapidly return to pre-disturbance levels. However, most of these studies have concentrated on small floods or ones with short return periods. I studied the impact of a large 1 in 6 year flood on the hyporheic community at 2 sites in the Hunter River, a large coastal river in New South Wales with a mean daily flow of 15 m3 s−1. The flood peaked at 1270 m3 s−1 and afterwards invertebrate densities at the 2 sites were 83 and 67% less than they were before. Recovery to pre-flood densities was slow but was aided by increases in the oligochaete and cyclopoid populations. At Site 1, there was a boom in oligochaete and cyclopoid numbers 61 d after the flood, but the communities resumed their pre-flood densities by Day 139. Recovery at Site 2 took 139 d. Most groundwater taxa (stygobites) living in the hyporheic zone did not recover from the disturbance when compared to non-stygobites. Apart from Microturbellaria and the harpacticoid Parastenocaris sp., numbers of all stygobite taxa continued to decline after the flood, becoming absent after 61 d. The poor recovery of stygobites is probably due to their adaptations for survival in the relatively stable groundwater environment. This study shows that hyporheic communities are sensitive to large bed-moving floods and supports the hypothesis that ecotonal species with a strong affinity to one ecosystem can be poor at recovering from disturbances that occur in an adjacent ecosystem.

The spatial distribution of benthic (up to 0.05 m depth) and hyporheic (0.25 and 0.5 m depth) macroinvertebrates from downwelling zones at the heads of riffles and upwelling zones at the tails of riffles was examined in two studies on a 4th order chalk stream in Dorset, England. In the first study, differences in benthic and hyporheic macroinvertebrate community composition between the head and tail of a single riffle were investigated. In the second study, a replicated design involving eight riffles was used to compare benthic and hyporheic macroinvertebrate community composition both between heads and tails of the same riffles and between riffles. In the first (single riffle) study there were significantly higher mean numbers of benthic invertebrates and families at the riffle head (715 individuals and 13.8 families per 0.0225 m2) compared to the tail (192 individuals and 8.7 families). ANOSIM analysis also showed that the community structure of head and tail benthic samples was significantly different. In the second (replicated riffle) study, there were also significantly more benthic invertebrates at riffle heads (\(\bar{x}\) = 594 per 0.0225 m2) compared to tails (\(\bar{x}\) = 417 per 0.0225 m2), although this was not the case for families, and community structure also differed significantly between riffle heads and tails. In contrast, in the hyporheic zone, there were no significant differences between the total numbers of invertebrates in the riffle heads and tails, or between riffles, although a significant difference in family richness between riffle head and tail samples was identified in the first study. Community analysis revealed progressively poorer separation of riffle head and tail samples at 0.25 m and 0.5 m hyporheic depths. Whilst being able to identify clear differences in benthic communities from riffles heads and tails, the physically heterogeneous nature of the riffle habitats studied made it difficult to account for the consistent differences in macroinvertebrate communities observed with the physical variables measured.

Biomass and breakdown of tree roots within streambed sediments were compared with leaf and wood detritus in three Coastal Plain headwater intermittent streams. Three separate riparian forest treatments were applied: thinned, clearcut, and reference. Biomass of roots (live and dead) and leaf/wood was significantly higher in stream banks than in the channel and declined with depth strata (0–10 > 10–20 > 20–30 cm). Riparian roots (live and dead combined) contributed on average 24 and 42% of coarse particulate organic matter (CPOM) biomass within the top 30 cm of channel and streambank sediments, respectively. Estimated mean surface area of live riparian roots within sediments was 1084 cm2 m−3. Streambed temperatures showed greater fluctuation at the clearcut site compared to thinned and reference treatments. However, breakdown rates among buried substrate types or riparian treatments did not differ after 1 y. Slow decay rates were associated initially with anaerobic conditions within sandy sediments and later with dry sediment conditions. Riparian roots represent a direct conduit between streamside vegetation and the hyporheic zone. In addition to contributing to organic matter storage, the abundance of riparian roots within streambed sediments suggests that roots play an important role in biogeochemical cycling within intermittent headwater streams of the Coastal Plain.

Environmental flow releases have been advocated as a useful rehabilitation strategy for improving river condition but assessments of their success have typically focused on surface water quality and biota. In this study, we investigated the impacts of an environmental flow release on water temperature, conductivity, dissolved oxygen, and nitrate concentrations in surface and subsurface (hyporheic) water at upwelling and downwelling zones in three sites along the Hunter River, New South Wales, Australia. We hypothesised that the flow pulse would ‘flush’ the sediments with oxygenated water, stimulating hyporheic microbial activity and nitrification, enhancing nitrate concentrations over time. Surface and subsurface samples were collected before, 7 days after, and 49 days after an environmental flow release of 5000 Ml for a period of 3 days. No lasting effects on dissolved oxygen or conductivity were evident at most sites although dissolved oxygen declined over time at the downwelling site at Bowmans Crossing. At the downwelling zones at all sites, hyporheic nitrate concentrations declined initially following the release, but then rose or leveled off by Day 49. This initial drop in concentration was attributed to flushing of nitrate from the sediments. At two sites, nitrate concentrations had increased by Day 49 in the upwelling zones while at the third site, it fell significantly, associated with very low dissolved oxygen and likely reductive loss of nitrate. Electrical conductivity data indicate that potential inputs of agriculturally enriched groundwater may contribute to the nitrogen dynamics of the Hunter River. This study highlights the spatial heterogeneity that occurs in the hyporheic zone within and among sites of a regulated river, and emphasises the need for multiple-site surveys and an understanding of groundwater dynamics to assess physicochemical responses of the hyporheic zone to environmental flow releases.

Interactions between interstitial meiofauna and physicochemical parameters of the hyporheic zone were examined via an in situ experiment on the Speed River, Ontario. The manipulation comprised reversing upwelling and downwelling zones at the riffle scale, and was maintained for 1 month. Significant differences in physicochemical parameters were detected between zones and between treatments (control vs. manipulated). Depth-related variables, such as sediment particle size, were most important in structuring the hyporheic community during pre- and post-manipulation phases. Flow reversal was largely successful, with more significant changes occurring in the original downwelling zone. For example, change from downwelling to upwelling resulted in decreased larval chironomid dominance but an increase in the numbers of oligochaetes, nematodes, mites, and copepods. However, under field conditions, it was difficult to keep other variables, such as water temperature, constant and some of these may have contributed to the changes seen in the meiofauna.

Metabolism was measured in four Michigan streams, comparing estimates made using a flow-through chamber designed to include the hyporheic zone to a 20 cm depth and a traditional closed chamber that enclosed to a 5 cm depth. Mean levels of gross primary productivity and community respiration were consistently greater in the flow-through chamber than the closed chamber in all streams. Ratios of productivity to respiration (P/R) were consistently greater in the closed chambers than the flow-through chambers. P/R ratios were consistently

This study describes a hyporheic zone that exists beneath a river-dominated estuary in North Wales, and which spans the freshwater/saltwater boundary. A series of 72 cores was taken from the Aber Estuary, in September, at depths from 10–60 cm below the bed surface. Site 1 was above the extreme high water mark and therefore was never inundated by salt water. Site 5 was the furthest downstream and was inundated twice daily by incoming tides. Substrates contained more gravel at the upstream sites and closer to the bed surface, with more sand and silt at downstream sites and at depth. Salinity of interstitial water increased both with distance away from Site 1 and with increasing depth into the zone, reaching a maximum of 15‰ at 60 cm at Site 5, as measured at low tide. Longitudinal and vertical zonations of the invertebrate taxa were evident, and densities were greater in the top 40 cm than below. Nematodes were especially abundant from 10–60 cm, and genera differed along the estuary. Oligochaetes were well represented at most sites, with the less saline sites yielding Naididae, Enchytraeidae, Aeolosomatidae and Tubificidae; Site 5 was dominated by Tubifex costatus. Chironomid larvae were most abundant to 40 cm at Sites 1 and 2 (primarily Brillia modesta, Corynoneura sp., Tanytarsus sp., and unidentified Tanypodinae), but they were also found at Site 3 (to 60 cm), and at 10 cm at Site 5 (Orthocladius sp.). Nymphs of mayflies and caddisfly larvae were found primarily at Site 1, but small stonefly nymphs and elmid beetle larvae were taken at Site 2 depths where the interstitial water was brackish. The most saline sediments were populated by the triclad Uteriporus vulgaris, the polychaete Nereis sp., and snails (Hydrobia sp.). Site, salinity, pH, and sand and silt contents appeared to influence species distribution most; together, these explained 37.8% of the variance (CANOCO). There was an overall negative relationship between silt content of the sediments and total invertebrate density. The hyporheic zone of the Aber Estuary is thus not only influenced by surface water and, presumably, estuarine groundwater exchanges, but is further complicated, biologically, by having a salinity gradient running through it. The term `brackishwater hyporheic zone' (BHZ) is proposed to describe this and similar systems.

Benthic and hyporheic (i.e. the water-saturated interstitial zone beneath river bed-sediments) processes together modify particulate and dissolved nutrient fluxes in streams, but the relative importance of these processes remains unstudied in large rivers. Changes in material and nutrient fluxes (total suspended matter, biodegradable and refractory dissolved organic carbon, and nitrate) were monitored along a reach with a regulated discharge (a by-passed section downstream of a dam). Mass balance diagrams highlight a contrasting functioning between upstream and downstream parts of this sector of the Rhone River (Pierre-Benite sector, France). At the upstream location close to the water input, characterized by partially clogged sediments and large lentic zones, decrease in total suspended matter (TSM) and biodegradable dissolved organic carbon (BDOC) fluxes resulted from high rates of benthic processes (i.e. sedimentation, respiration and mineralisation). At the downstream location, characterized by strong vertical water exchanges in a large riffle, nutrient changes resulted from the combination of processes that took place at the surface of the stream bed and during water percolation through riffle sediments. Physical benthic processes (scouring of periphyton, erosion and resuspension of sediment due to higher surface velocity) lead to an increase of TSM and DOC fluxes. Within the riffle, decomposition and mineralisation of organic matter in the first meter of the infiltration zone, and physical entrapment of RDOC, make the riffle as a sink for DOC and a source of nitrate. The significant contribution of the riffle to the self-purification capacities of this large river reach shows the relevance of including interstitial compartment in self-purification studies.

Along a single stream riffle, there is a typical flow pattern in which surface water enters the hyporheic zone in a downwelling zone at the head of the riffle and hyporheic water returns to the stream surface in an upwelling zone at the tail of the riffle. Distinct patterns of physical and chemical conditions in the hyporheic zone are likely to determine patterns of microbial activity and occurrence of hyporheic fauna. Interstitial water and core samples were taken at three depths in the downwelling and upwelling zones of a single riffle in the Speed River, Southern Ontario, Canada. Physical and chemical characteristics of the hyporheic water, bacterial density, protein content, detritus content and faunal composition of the hyporheic sediment were analysed. The downwelling and upwelling zones differed significantly in temperature, pH, redox potential, dissolved oxygen and nitrate with significant positive correlations occurring among the latter three. There were no differences in bacterial density or detritus content between the two zones nor between depths in either zone, but protein content, considered to be a measure of biofilm biomass, was significantly higher in the downwelling zone. Total density of hyporheic fauna and the number of taxa decreased with increasing depth in both upwelling and downwelling zones, and were positively correlated with surface water characteristics (oxygen, temperature and nitrate), sediment protein content and detritus; however, only a weak correlation was found with zone. The composition of taxa differed between the two zones, and faunal distribution was correlated with dissolved oxygen, detritus, protein content and depth.

Interstitial water samples were collected from two well depths (30 and 60 cm) from 8 rivers in the Cass-Craigieburn region, South Island (New Zealand) during January 1998 to assess the hyporheos in streams of differing stability. Hyporheic water chemistry was more similar to surface water chemistry at unstable sites than at stable sites. The greatest diversity of both epigean and hypogean animals occurred at intermediate levels of disturbance; however, invertebrate density declined with increasing bed movement. Abundance of epigean animals also increased with declining environmental stability (i.e., increasing bed movement). Water chemistry was most like the river channel at unstable sites, probably because less stable substrates had increased interstitial flow facilitating a greater supply of water from the surface channel. In contrast, stable sites were spring fed and groundwater had a greater influence. Thus, substrate stability may influence hyporheic water chemistry and porosity by changing the interaction between ground and surface waters. Epigean taxa may be less abundant at stable sites because the chemical nature of the water is least like the river channel (e.g. low dissolved oxygen, higher temperature and higher conductivity), while the abundance of hypogean animals is greater, as these taxa are more tolerant of this water chemistry, and are thus capable of persisting in the stable substrates.

Along a single stream riffle, there is a typical flow pattern in which surface water enters the hyporheic zone in a downwelling zone at the head of the riffle and hyporheic water returns to the stream surface in an upwelling zone at the tail of the riffle. Distinct patterns of physical and chemical conditions in the hyporheic zone are likely to determine patterns of microbial activity and occurrence of hyporheic fauna. Interstitial water and core samples were taken at three depths in the downwelling and upwelling zones of a single riffle in the Speed River, Southern Ontario, Canada. Physical and chemical characteristics of the hyporheic water, bacterial density, protein content, detritus content and faunal composition of the hyporheic sediment were analysed. The downwelling and upwelling zones differed significantly in temperature, pH, redox potential, dissolved oxygen and nitrate with significant positive correlations occurring among the latter three. There were no differences in bacterial density or detritus content between the two zones nor between depths in either zone, but protein content, considered to be a measure of biofilm biomass, was significantly higher in the downwelling zone. Total density of hyporheic fauna and the number of taxa decreased with increasing depth in both upwelling and downwelling zones, and were positively correlated with surface water characteristics (oxygen, temperature and nitrate), sediment protein content and detritus; however, only a weak correlation was found with zone. The composition of taxa differed between the two zones, and faunal distribution was correlated with dissolved oxygen, detritus, protein content and depth

Biota and chemistry from hyporheic samplers were used to describe environmental changes, after treatment of mine drainage, in the shallow hyporheic zone in the upper Arkansas River, Colorado, U.S.A. Samples were collected (1992–1997) from above and below the mine drainage source, and further downstream where a historically cleaner tributary enters the system. Hyporheic metal concentrations were high during spring runoff at the impacted site even after initiation of treatment, but declined after several years. Correspondence analysis and increased invertebrate taxa richness suggested that hyporheic macroinvertebrates were recovering at the previously impacted site. Differences in substrate between sites and high water flows in 1995 also appeared to affect hyporheic communities. High taxa richness and abundance, taxa unique from those found at the surface, and high concentrations of metals found in the shallow hyporheic zone suggests that sampling this zone is important for monitoring recovery of polluted streams.

Field distributions of benthic and hyporheic invertebrates are dynamic and are influenced by many physical and chemical factors. A laboratory flume containing natural gravel substrates was used to test the hypothesis that the amphipod Gammarus roeseli Gervais actively selects habitat based on two important environmental variables, dissolved oxygen concentration and direction of water flow. Under homogeneous oxygen concentrations throughout the flume, amphipods accumulated downstream. During trials with uniformly hypoxic conditions throughout the flume, G. roeseli moved to stones and screens at the water surface and above, into the zone normally saturated with humidity. This behavior, termed aquatic surface respiration, may enhance survival during periods of oxygen deficiency. Oxygen gradients were created in the flume by injecting water of differing oxygen concentrations into the head and the center of the channel. A statistically significant response to these gradients by G. roeseli demonstrates active selection of regions with more favorable oxygen concentrations.

Community respiration in hyporheic sediments (HCR) was studied in a characteristic riffle-pool-sequence of a mountain stream. HCR activity at the riffle site strongly exceeded that at the corresponding pool site with a mean ratio of 5.3. The vertical distribution of HCR activity was homogeneous in the pool, while there was a distinct maximum in the uppermost layer in the riffle. Similarly, the spatial distribution of certain fractions of particulate organic matter (POM), and their turnover, was largely determined by stream morphology. Mean annual HCR per unit area of stream bed was estimated as 1.71 g O2 m−2 d−1. Hence, HCR contributes significantly to total heterotrophic activity in streams, thus enhancing the relative importance of heterotrophic processes in running waters containing hyporheic zones.

Diel variation in interstitial physical-chemical features and hydrologic exchange between the hyporheic zone and surface environment were studied in Sycamore Creek, Arizona. Wells were established beneath the wetted perimeter of the surface stream and beneath exposed alluvial sediments lateral to surface water. Dissolved oxygen (DO) was reduced in the interstitial environment (

The subsurface riparian zone was examined as an ecotone with two interfaces. Inland is a terrestrial boundary, where transport of water and dissolved solutes is toward the channel and controlled by watershed hydrology. Streamside is an aquatic boundary, where exchange of surface water and dissolved solutes is bi-directional and flux is strongly influenced by channel hydraulics. Streamside, bi-directional exchange of water was qualitatively defined using biologically conservative tracers in a third order stream. In several experiments, penetration of surface water extended 18 m inland. Travel time of water from the channel to bankside sediments was highly variable. Subsurface chemical gradients were indirectly related to the travel time. Sites with long travel times tended to be low in nitrate and DO (dissolved oxygen) but high in ammonium and DOC (dissolved organic carbon). Sites with short travel times tended to be high in nitrate and DO but low in ammonium and DOC. Ammonium concentration of interstitial water also was influenced by sorption-desorption processes that involved clay minerals in hyporheic sediments. Denitrification potential in subsurface sediments increased with distance from the channel, and was limited by nitrate at inland sites and by DO in the channel sediments. Conversely, nitrification potential decreased with distance from the channel, and was limited by DO at inland sites and by ammonium at channel locations. Advection of water and dissolved oxygen away from the channel resulted in an oxidized subsurface habitat equivalent to that previously defined as the hyporheic zone. The hyporheic zone is viewed as stream habitat because of its high proportion of surface water and the occurrence of channel organisms. Beyond the channel’s hydrologic exchange zone, interstitial water is often chemically reduced. Interstitial water that has not previously entered the channel, groundwater, is viewed as a terrestrial component of the riparian ecotone. Thus, surface water habitats may extend under riparian vegetation, and terrestrial groundwater habitats may be found beneath the stream channel.

The surface and hyporheic fauna of a second-order reach of a northern California Coast Range stream (Big Canyon Creek, Lake Co., CA, USA) was examined using substrate colonization samplers (i.e. hyporheic pots) during both the wet and dry seasons in the prevailing Mediterranean climate of the region. In terms of total number of macroinvertebrate taxa, the surface (0 cm to −5.0 cm within the stream substrate) level had higher richness than any level within the hyporheic (−5.1 cm to −15.0 cm, −15.1 cm to −25.0 cm, or −25.1 cm to −35.0 cm) from the beginning of the dry season (May) to the beginning of the wet season (October); during this period the surface was not subject to disturbance from wet-season storms. During the wet season, richness at the surface was similar to that observed at any of the three hyporheic levels examined. Macroinvertebrate density at the surface was substantially reduced during the wet season; however, mean surface densities always exceeded those found within the hyporheic zone (from 25% to 78% of total macroinvertebrate numbers were found at the surface). Seasonal fluctuations in abundance of total macroinvertebrates and density of many constituent populations were less within the hyporheic zone than at the surface. Apparently, early instars of abundant surface taxa do not penetrate the interstices, and substrate disturbance due to spates is less in deeper levels. Compared with many hyporheic faunas described from other temperate-zone sites, this hyporheic community shows reduced numerical dominance by the Chironomidae.

Porewater flowlines in the bed of a small Michigan USA river were shown to be altered by Chara hummocks, sea lamprey nests, and beaver dams. Altered flow lines followed expected in-bed convective and underflow patterns predicted from published models. The greater density and shape of Chara hummocks caused upwellings into the hummocks, possibly being of benefit to the plants through contact with higher levels of dissolved substances contained in the cooler, deeper porewater. Streamwater downwelling into the more permeable sea lamprey nests may provide a continuous supply of well-oxygenated water, enhancing egg survival. Convective flow patterns beneath beaver dams, as well as beneath other bed surface features, may function to temporarily store dissolved streamwater substances, altering downstream transport rates, and may function to bring porewater/streamwater to the surface, affecting distributions of surface dwelling organisms.