1. Genome-based reclassification of Azospirillum brasilense Az39 as the type strain of Azospirillum argentinense sp. nov.
- Author
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Dos Santos Ferreira N, Coniglio A, Puente M, Sant'Anna FH, Maroniche G, García J, Molina R, Nievas S, Volpiano CG, Ambrosini A, Passaglia LMP, Pedraza RO, Reis VM, Zilli JÉ, and Cassan F
- Subjects
- Bacterial Typing Techniques, Base Composition, DNA, Bacterial genetics, Fatty Acids chemistry, Nucleic Acid Hybridization, Phospholipids analysis, Phylogeny, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Ubiquinone analysis, Azospirillum brasilense genetics
- Abstract
Strain Az39
T of Azospirillum is a diazotrophic plant growth-promoting bacterium isolated in 1982 from the roots of wheat plants growing in Marcos Juárez, Córdoba, Argentina. It produces indole-3-acetic acid in the presence of l-tryptophan as a precursor, grows at 20-38 °C (optimal 38 °C), and the cells are curved or spiral-shaped, with diameters ranging from 0.5-0.9 to 1.8-2.2 µm. They contain C16 : 0 , C18 : 0 and C18 : 1 ω 7 c / ω 6 c as the main fatty acids. Phylogenetic analysis of its 16S rRNA gene sequence confirmed that this strain belongs to the genus Azospirillum , showing a close relationship with Azospirillum baldaniorum Sp245T , Azospirillum brasilense Sp7T and Azospirillum formosense CC-Nfb-7T . Housekeeping gene analysis revealed that Az39T , together with five strains of the genus (Az19, REC3, BR 11975, MTCC4035 and MTCC4036), form a cluster apart from A. baldaniorum Sp245T , A. brasilense Sp7T and A. formosense CC-Nfb-7T . Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) between Az39T and the aforementioned type strains revealed values below 96 %, the circumscription limit for the species delineation (ANI: 95.3, 94.1 and 94.0 %; dDDH: 62.9, 56.3 and 55.6 %). Furthermore, a phylogeny evaluation of the core proteome, including 809 common shared proteins, showed an independent grouping of Az39T , Az19, REC3, BR 11975, MTCC4035 and MTCC4036. The G+C content in the genomic DNA of these six strains varied from 68.3 to 68.5 %. Based on the combined phylogenetic, genomic and phenotypic characterization presented here, we consider that strain Az39T , along with strains Az19, REC3, BR 11975, MTCC4035 and MTCC4036, are members of a new Azospirillum species, for which the name Azospirillum argentinense sp. nov. is proposed. The type strain is Az39T (=LBPCV39T =BR 148428T =CCCT 22.01T ).- Published
- 2022
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