1. Identification and Characterization of Circular RNAs as a New Class of Putative Biomarkers in Diabetes Retinopathy
- Author
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Xue Chen, Kun Shan, Biao Yan, Xiu-Miao Li, Bai-Hui Liu, Chang Liu, Qin Jiang, Shu-Jie Zhang, Chen Zhao, and Chao-Peng Li
- Subjects
0301 basic medicine ,Tube formation ,Regulation of gene expression ,Diabetic Retinopathy ,Reverse Transcriptase Polymerase Chain Reaction ,RNA, Circular ,Biology ,Cell biology ,Intracellular signal transduction ,03 medical and health sciences ,030104 developmental biology ,Gene Expression Regulation ,Circular RNA ,Cell Movement ,Extracellular exosome ,microRNA ,Humans ,RNA ,DNA microarray ,KEGG ,Biomarkers ,Cells, Cultured ,Cell Proliferation ,Signal Transduction - Abstract
Purpose To reveal the expression profile and clinical significance of circular RNAs (circRNAs) in diabetic retinopathy (DR). Methods Circular RNA microarrays were performed to identify DR-related circRNAs. Gene ontology (GO) enrichment and KEGG analysis was performed to determine the biologic modules and signaling pathway. TargetScan and miRana program was used to predict circRNA/miRNA interaction. Quantitative PCR assays were performed to detect circRNA expression pattern in clinical samples. Ki67 staining, Transwell, tube formation, and spheroid sprouting assays were performed to investigate the role and mechanism of circRNA in endothelial angiogenic function. Results A total of 529 circRNAs were aberrantly expressed in diabetic retinas. The host genes of differentially expressed circRNAs were targeted to ATP binding (biologic process); extracellular exosome (cellular component); and intracellular signal transduction (molecular function). Circ_0005015 was verified to be upregulated in the plasma, vitreous sample, and fibrovascular membranes of DR patients. Circ_0005015 facilitated retinal endothelial angiogenic function via regulating endothelial cell proliferation, migration, and tube formation. Circ_0005015 acted as miR-519d-3p sponge to inhibit miR-519d-3p activity, leading to increased MMP-2, XIAP, and STAT3 expression. Conclusions circRNAs are involved in DR pathogenesis, and thus serve as potential biomarkers of DR diagnosis.
- Published
- 2017