1. Genetic analyses of chr11p15.5 region identify MUC5AC-MUC5B associated with asthma-related phenotypes
- Author
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Li, Xingnan, Li, Huashi, Christenson, Stephanie A, Castro, Mario, Denlinger, Loren C, Erzurum, Serpil C, Fahy, John V, Gaston, Benjamin M, Israel, Elliot, Jarjour, Nizar N, Levy, Bruce D, Mauger, David T, Moore, Wendy C, Zein, Joe, Kaminski, Naftali, Wenzel, Sally E, Woodruff, Prescott G, Bleecker, Eugene R, Meyers, Deborah A, and Program, for the NHLBI Severe Asthma Research
- Subjects
Epidemiology ,Biomedical and Clinical Sciences ,Health Sciences ,Human Genome ,Genetics ,Clinical Research ,Asthma ,Prevention ,Lung ,2.1 Biological and endogenous factors ,Respiratory ,Humans ,Genome-Wide Association Study ,Cross-Sectional Studies ,Phenotype ,RNA ,Messenger ,Mucin-5B ,Mucin 5AC ,Asthma susceptibility ,asthma severity ,eQTL ,gene expression ,genetic association ,MUC5AC ,MUC5B ,NHLBI Severe Asthma Research Program ,Clinical Sciences ,Public Health and Health Services ,Allergy ,Clinical sciences ,Public health ,Clinical and health psychology - Abstract
ObjectiveGenome-wide association studies (GWASs) have identified single nucleotide polymorphisms (SNPs) in chr11p15.5 region associated with asthma and idiopathic interstitial pneumonias (IIPs). We sought to identify functional genes for asthma by combining SNPs and mRNA expression in bronchial epithelial cells (BEC) in the Severe Asthma Research Program (SARP).MethodsCorrelation analyses of mRNA expression of six candidate genes (AP2A2, MUC6, MUC2, MUC5AC, MUC5B, and TOLLIP) and asthma phenotypes were performed in the longitudinal cohort (n = 156) with RNAseq in BEC, and replicated in the cross-sectional cohort (n = 155). eQTL (n = 114) and genetic association analysis of asthma severity (426 severe vs. 531 non-severe asthma) were performed, and compared with previously published GWASs of IIPs and asthma.ResultsHigher expression of AP2A2 and MUC5AC and lower expression of MUC5B in BEC were correlated with asthma, asthma exacerbations, and T2 biomarkers (P 0.8).ConclusionsSNPs associated with asthma in chr11p15.5 region are not associated with asthma severity neither with IIPs. Higher expression of MUC5AC and lower expression of MUC5B are risk for asthma but protective for IIPs.
- Published
- 2023